Sed0015375 (gene) Chayote v1

Overview


Name	Sed0015375
Type	gene
Organism	Sechium edule (Chayote v1)
Description	coiled-coil domain-containing protein 93 isoform X1
Location	LG01: 9958705 .. 9966911 (-)
RNA-Seq Expression	Sed0015375
Synteny	Sed0015375

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTACAGCCATGGTTTTCCGATCCACAGTTCTCGCCGCCTCACTTTGTCCAGACGGCTGCAGGGCGGATATCTACCGGAAGAAGCAGCTTCTCTTCTAAGCAATACACAGAAAATTGGCCATTTTATTGACTTATTGGAGTTTCATTTTCCGGCGACCTCAAACTTCGCCGTTCGATCGGTTTCGCGGGAATTCGGAATTCCGTGATTTCTTCATCCCAGAAGCTGGATTCCAGCATTTCCTGTTGCATCAATCAGTAACAGGTGTGTATAATCAATTCGATGTCGCCGTTTTCCCTTTCCATGAAAAACGAGAGAGAATAAGAATTTTGATGAGTTTTAGCATCCATTTTAGTCAGTTGAATTAGTTTCAAATTGACCTGAGGGTGACTTCCATATCGTTGTGGTACATGTACAATTGCAGCGCCTTCTAGAGAGCAAGAGCTCTGTACATCCACATTGATCCGTGTAATGTCTGAAGATAGCAAGAATCAGGTAGTTAGTCTTTGTTTAATATCAGTTTTGATGTTTTGGTTCGGTGAATATCAATTGTGAATTGGGAACTTGGGATTGAAATTGTTATGTGGTTTGCAGGTATTATTGAGATTACTTTTAAATAATCATGATGTGTTTACTTTTAAACATTTAGTCTGATTCAAAACTGCTGGAAATTATTGGGTACTTGCACTAAGCACTTGATTGAGGAAAACGAACATTTTCAACGCCTTCAGGTGGATTCTGATAATGGAGTTTCAAGGGAGACGCTAGAGGAGGATTTAGATGAATTGGTCGGTGATTTTTTTTGGTTTTTTCCTTTTCCTTCTAATGATTATAAATGAAGCTGTATAGTACTGTTAAGATCACCAGAAAGTTTGTATTAGAATATAATTATGAAACATAATCATCGGTGCATCTTTTTCTCTTTGGAAAAAAAGTTTCCCCTGATGAATTTCTTTTCTCGTGTTAAGAACCTGAAGAAAGTTAAAATGTTGAAAGATTTGCAACTTTTACGAGATAGAGTCGCTAAGGCGGATGCTAATCATGTGGTGGAGAAGTTGATCTCATGCTCAAAGACTTTGGAGGTCTGCATTTTTGTTTTGCACTTACAGTCTCTTTTTCTTGTTTAGTAGTATTTGCCTCTTTGATTTCATTAAGTTATTTTTCTTTAATTTTTGATTATGTGGAATTGGAGCTACGCTCCACTACATGCCCGAGGGCAGCTGCACCCTTCCCATGACCCGTATTCGGTAGACAAGGGATTTTACGATTAAGTTCACTCGTGAGTTTTAAAATTGAGACCTCTAAAGGAGAATACATAGGAGATCCAAGCCTTTACCAACGAGTCTGCCCGCTTGGGGACTCTCTGATTTCATTTATAGTCCTTGTAATTTTCTGAACTGCCCCTTTTTACAATTTTTAACTTGTTTTCTGTTCCTCTTAGGGGGCTGAAGATTATTTTATTTTCTCTGTTTTATTTGAAGAGTGGTGGTGACTGAAAGACCATCTCTTGGGAAAAATATCTTGAACATTTTCAGGGTTCTTTGAAGTATATTTCTCCATTTAAATTTGCACAACTTTTTCTCTGTTTAATAACAATCTGGATTTTTTCTGTTCCTCTCTCTCTCTCCCCTCTCCCTCTCTCTCTCTATTTACAACGAGTCAATAGTCATACTATAGCAAGTATATTTTGAAACTAAGGTAACCACGCCCGTCCCTAGTCTAGGTACCATACTATAGCAAGTATATAGCCCTTTTCTTACAAAACTTTGTCTTGAAATGGAGTACATCAATCCCCAAGGGGTGGCACAATGGTTGAAAACTTGGGCTTTGATGGTATGCTCCCTTCAAGGTTCTAGGTTCGAGACTTACCTGTGACATTACTCTTTTGATATCTCTCGGTGCCTGGTCTAGGGACGGGCGTGGTTACCCTTGTTTAAAAAAAAAAAAAAAAATGGAGCACATCAGTCATTATAGGTGCTTTCCCACCCATATCTTTTTGTTATATGTGGCATATTTGGTCACCTCACCAATTTACCTTTTGGCTTGTCTCTGACGCAATGGTGGAAGACTTGAGCTTTGAAGGTGTGCCCCTTTTAAGGTCTCGGGTTTGAGACTCACCGATGACATTAATTTGTAGACACCTCCCGTGTCTCCACTCCTTCGATGTTTCCCCTTTCCGGTGCTTGGCATAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAATTTACCTTTTGGCTTGTCTCATGTAAAAGTTTAAAGTCTGCGTTGAAGGCGTGGCCAAGGTTTTATTTGCAAATAAATGGAAATATATATTTAATTAAACTTTTGTCACTAATTTATTTGAAACAAGGGCGTGCCTAGGTGTGGTCACCAATTTACCTTTTGGCTTGTCCCCGACGCAGTGGTGGAAGACTTGAGCTTTGAAGGTGTGCCCCTTTTAAGGTCTCAAGTTTGAGACTCACCGGTGACATTAATTTGTAGACACCTCCCGTGTCTCCACTTTTTCGTTGTTTCTCCTTTCCGGTGCCTGGCATAGGGACGGACATGGTTACATTTGTTTCAAAAAAATTTACCTTTTGGCTCGTCTCATGTAAAAGTTTAAAGTCAGCGTTGAAGGCATGGCCAAGGTTTTATTTGCAAATAAATGAATATATATATATTTAATTAAACTTTTGTCACTAATTTATACTGCTATGGGTTCGGTTTGAAATTGTAGTCATTTAGAAAGGTTCCTTATCATTTGTATTCTGCATTATAATGTTTAATTGCATGATCACCTATATATATATATAACCTATTTTTTGTGTTTGTGATAAAGGATAATTATTATTTTTTCCATGATCTGTTGGGTTTCAAATGCACTTTGGTTTGTTTCAGGACCTTGGAAAGCTGGAATCTGAATTCCTATCTACTTGTAATGTGAAGCGTAATAAGTTGCAAGATGAGATTATTGAGCTGGAGGGAAGATTGAAAGGAGACCACAATAGCTCAAGCTTCCTAGATAGCTTAGATACCTTGGTTTGTGAATCTCAGGAGGAATTGAATTCAGTAAACAAGGTAACCTTTTTTCTCCCCAAAGCAGTTTTTCTTATGCGTTCTCCTTAGTACGCTGAAGAATTCAAAATCAAGGCTTGAGGCCATTCCGACTCAACATTTCGTTGTTGGATCTGCATTATCTTTTTTGCATGAGACCTAGTGAACTCATTGATCCATTCGTCTATTTGTGGTAAAAAACAATTTTATTGATATGTGAAATTGCAAAGAAATGGATAAACCCATAACTCATAAGTAGGGAGAAAAAGGGAAAGTTGCAATAGATCAGTCATTGACCTATTTATCTTGGATATAACTCTGCGTTTTATCTTTACTGTAGGCGCTCGCATCTAGATTGAGGGAAACACTAGCATTAAAGAGGGTTCTTGAAGACGTGCCAGCCCAAGCTGAACTCATCCAGTTTGTTGTTCTCTGATTAGCTTTCTGTTGTTTCGTACTTTTATTTTGCTGGTGTATGTTTATTGTTGAGAGTTCATAGTTGGAATCGTCTACCTCTCATTTGTTGTTGAACTCAATATTGTCGCTAGTCCATTGCGACTGTTATTTTTAAAAAAATTAGTAATGAAAATTCATCAATAACATGAGTTGGGAAAAACAACATAACGGCCTGGATATAGGGAACCCCACTTAAGACTACTTCAAAAAGGCTTTCCAATTGAAGGAAGGCTGTAATTAGGAAAGAAATTTCTTCGACTGTACCCCCAATAAGAAGCAGTATTATAGAGTTACATTTGTACTAGTCCATTGCATGACTGCCTCTTCTTTTTGTTATTATTTTTGGTTAAGAAACAATTTGATTGATATATGAAATCATGAAAAGAAAAAAATTACAAAAGAAAGAGCTAAAGGCCGTAGGGGAGGATTGCATAATTGCCTCATCTTCATTTTTCGTCGTTCTTGTCAGTTTTTCCTCGTGATAATCTTCAACCAACGCCCCGGTCTCAGGATTTAGAACTTGGATTTGGCTCCGACATTCTTCTGCATCCTCGACATTCTTCCTTAGGATCCCTCTCATTTGGATATGGTACAGTTCATTCATGTTCCCCTCATAAGTCATAACCTTGGGCATTACATGCCCACATATTATTGGGAGAGGTTTCGCTATGATACCATTCGTAACACCTTAGGGCCAAGATTCAGACTAGGATTTGAAATCTGGATTCAGCCCTCTTGGCCTCAGCATTTTCGTGCTTCCCCTGCGACCTGACCATATTCACATACTTCCTAGGAAAATTTCCAAGAGGTCGTGCAACATAAGATTGCTTCAAGTTAAGCATGCTTAACTATGAAGTTCCTACAATTGAGCCATAAAAAAGGAAGGCGCATCTTGTTTGTTCAAATCAATTTTTTTAAGTCTTTCTTAACCATGTCTATAATATCCTCATAATCCCTCTCATTCAGATGTGGTATGGTTCATTCATGTACCCCTCATAACCTCTGGTGTTACATGACAGGGAGGATTGCATGAGTTTATGTCGTGTCTATTCAAACCATTGGGTTAGTGGCCATTCCATCACATGCCTATGTGTAGGAGTATAGAAACCAAGTTCGAGTAGATTTACAGTACAGATTACTAAACGGAAGATTTCGTTATAAGCAATAATACTTCAAAATAAGCATACTCTTTACAACAGCAAAGATCTTAAATTTTCAATATTCGATGAGAACTCCAGTTACAAGAACAAGTAAAGAAAGGATAAAAGGAAATAGCAAACGAACAAAATAGAACAACGTTACCCTGGGAGTCAAGAGCTCTGGGTCTCTCCCTAGAAGTCCTTCGACTATCTTCCCAAAATAAGACCTACCCCCTTCCTCCACATTTCCTTATTTATAGTCTCAAGTTAACTCTCCCCCACAGCATCACCACCTTCACATGGCCTCTAACGGATTGTTCCCACTTCCCAGTTCCCCAAATTGCCCTTGCTGGAATAATTATGTATAAATGGTATACTTACACTATGTATGGGCAAATAGTTTTTTTCTTCTTCTCATTTTCCCCTATTTTCTGGTCCCCATTACTCAATGACCGACTGCATATGGCATAATTATTTTAGGTGTGGATACATTTCACTTATTCATTTATTACTCAACTCTGGCTTTTGAATTTCACACCGGCATTTTGAGATACTTCTAAATGTCTTGCATTTTTCTGAAAGTCACATCTTCTAATTTAATCTCAGTTTGCAGGTATGAGCGTCGTTTTTCAGAGTTATATATTAACATCCAGGTTCAATAATTGGTTTGTCTTGATTCGTATAATTTAATAAAACTCTTACGGGTAATAATATTTTACTCTTATTTGAAGTTGTATTGTCAAGCAGGATAAACTTAGGCAAACACGCAGATACTATGCAACCTATAATGCACTCTTGGAGATGAAGGATCTGATGTTAAAGGAGACATCCTTATTAAATTCCTTAAGTTCACAGGTATATCATATATGATCATTAAAAGGATACACAATTGTCAATAATTTCTTTCTCCATGTCAAGGAACGATTGTCCATGGCTGCCAATGTGGTGATGATTTCTATAGCAAGGTGTATGACATTTTATTTATAATCGGTGTACTAGGGAGTAATACATCTTTCTGCTGCATGTGAATTGTTTCTTTTATCTACCAACTTTATTGCTTGGCTTTGGTTCTCTTTTTATTTATTTATTTTTATTTTAGTTTGGACATGTGGGGCATTTAGTCCTTCCTCCTACTTTCATCCCTTGGTAGTCTGGTTAAAACTAGTGTCATTGCCTTCTGTTATAAATTTTTATTTTTAATGGTTAAGGCTAGTGACATTAGTCATTTCGCGAAGAAAAATGAAGCCATTCCTTTATAACTCTGTTACTGATACTGACATTCCTTTATAACTTTTGTAGTTTCAAGATGCCATAACCAGCTCCACGAGTCGAATGAAACTTATTGATTCCATGGAGGGAATTCTGAAAGGCATTCAACAAGTAATTTTCGTTTCCACTGTTGAGCTTATGACATAAAGAGAAGAGTAACTGCATTGTGGATTTATCAATGATCCAGTGTCTTAAATGTTCAGAGGCTAGTCTGCAATAAGTTTCAATAATTCTAATCCTTTTTTTTTTTTAATATTTAGGGAACCCCCTCTTATTTATCGAATTGAAAACTACAAATTTATCATCCTGATTAGAATTTGCTTCCGGAATAGTTTTGAATGATTTAAATCACAGTGTTATTTTTTTAAAAAAATATTTAATTCTGTTTTGTCAATTTAAATTTTAAATGTTCATTTTCATTTAATGGAATCCTAAATGATTAATTACTTCTAAATTAGAAATTTTCAATTATCGAGCTAATAGATTACACAAAATTCAACCAACGACAAAACTCCAAAAATTCAGCCATTGAAGTGCCGGAACCTGGCATGTGAAACATCCTAGTTTTGCCACCAGATCAAACTATCAAAGAACATCTAAACTCAACCAACAAAACGTACAAGCCCAGCTAAAAAGCTTCCAATTCAATGATAAATTTACTAATATTGCATCACCTTGCCATGTGAGTAGTCACACATAACTAAGCCTTGAATCTTAAAAGAAAAGAAAAAGGAAAATAATATATATATATATATTTTGAGTTCAACAGCAATGGAGGGTGTAGTGTTCGAACCTATGTTCTTGTTGGCTGAAATATAATATATATATATATATATATATTTCATTGATTTATTTTGATAAGAAACCTTTTTATTGATGAGTGAAATATAATAAATTGAGAGTATTGATTTCATCCTTTTATTTAAATTTAGGGTCCAATCGAATGAAATAAAAGGTTGAGGTTAGAATTGATCAACTAAGCCAAGTATAGGAGGAAGAATGAATTTTCCCTTTCTTATAATTGTTGATCTTCATGAGTTGCAGTCTTTTTTTATTTTAGTAGTAATAATGATAATATTTGTTATTAATATCTGCAGAAACTAGATAAGGTGCATCTCTCTCATCAAGAAGAGCAGCAGGTCTGCAATGCTTTAAAAGAGAAATATGCTGCAGCAACTGCAGAGCAAAGACGCTGCTATACCCTCTTAAAAGCTTTCCAGGTGAACTCTGTACTGTTGTGAATGATATTAAGCTTTCTATGTCTGCTAAAAGTTACTACGTTCTGAAAGGTTGTTTCATTTGAGATTACCGTCCACCCAGCGAGGCAGTTGGCTGAATGAGTTAAAATACCATTTTGGTCGCATTCATTTTATTTTAATATACGTAGTTCCAAACATAGTTCATGTTCTTTCAATAATCTTAAAACTATCCTTTATCATTGGAAGTTTATTTTTTATCCAACTTTGAAAAGTAATAATAGCAATTTTTCTTAAAGAAAAAACTACCTTGAGTAGGTTAGTGGTCAAAAGGACATTAAGAAACCAAAAGGTTGTGAGTTCAATTTATGGTAGGAACCGATATTCTATGGATTTCTTTGACATTCAAATATTGTATGGTCATATGGTATAATCTGTAAGAATAGTCGAAGTGCGCGTAAGTTTGGAGAGGGATGATTGATGGAGAGTACAAATACAAGCTTGGACATTTGAATGTTTATGAACTAAAATAAAACTAGTATTGAAGTACATACAACAAAGTATAAGGACGAAAATGATATTTTTACCTACATTTAACATAGGTTGGTTGTTCAGTTTTGAAACATTGAGGGTTCACATAGAAGTAAAGATAACAACCTCTTTGAAACCACCGCTGTCCTTGCTTATTTTTTTCATTTTTCAGGAGGAATGTGCGAAGAACGAGAATCTTCGGGCCCAAAAGTCCATGTGAAAAGATTTAAGGCACCACCATTGCCGTGTTATAGCCTTCGTTCAATTCGGTCAATGTTAGATGGAGAATTTGTGACAATGGGAAAAGAAAGAAGAGATGGATTAGAGGACTTCAAAAGAGTTGAACTAATTCAAATGCTTCGTCCTATTGCAGCACCAAAGCTTGTAAGTCAAAATAATCTCCTTTAATGACTTTTGATCTGTAGTTACCTAACTTTTTTAAGGAACAGAGCTTGTGTGTGAATATTCCCACGTTCTCCTCCCTTTCATGCCTTTTGAATAGGATAAAAAACTTGTCAATGCATGTTTAAGAAAACATGCGGGGACATAATTGAAAGAGCCCTAATTTGGACGGATGTGGAGG

mRNA sequence

GTTTACAGCCATGGTTTTCCGATCCACAGTTCTCGCCGCCTCACTTTGTCCAGACGGCTGCAGGGCGGATATCTACCGGAAGAAGCAGCTTCTCTTCTAAGCAATACACAGAAAATTGGCCATTTTATTGACTTATTGGAGTTTCATTTTCCGGCGACCTCAAACTTCGCCGTTCGATCGGTTTCGCGGGAATTCGGAATTCCGTGATTTCTTCATCCCAGAAGCTGGATTCCAGCATTTCCTGTTGCATCAATCAGTAACAGCGCCTTCTAGAGAGCAAGAGCTCTGTACATCCACATTGATCCGTGTAATGTCTGAAGATAGCAAGAATCAGGTGGATTCTGATAATGGAGTTTCAAGGGAGACGCTAGAGGAGGATTTAGATGAATTGAACCTGAAGAAAGTTAAAATGTTGAAAGATTTGCAACTTTTACGAGATAGAGTCGCTAAGGCGGATGCTAATCATGTGGTGGAGAAGTTGATCTCATGCTCAAAGACTTTGGAGGACCTTGGAAAGCTGGAATCTGAATTCCTATCTACTTGTAATGTGAAGCGTAATAAGTTGCAAGATGAGATTATTGAGCTGGAGGGAAGATTGAAAGGAGACCACAATAGCTCAAGCTTCCTAGATAGCTTAGATACCTTGGTTTGTGAATCTCAGGAGGAATTGAATTCAGTAAACAAGGCGCTCGCATCTAGATTGAGGGAAACACTAGCATTAAAGAGGGTTCTTGAAGACGTGCCAGCCCAAGCTGAACTCATCCAGTATGAGCGTCGTTTTTCAGAGTTATATATTAACATCCAGGATAAACTTAGGCAAACACGCAGATACTATGCAACCTATAATGCACTCTTGGAGATGAAGGATCTGATGTTAAAGGAGACATCCTTATTAAATTCCTTAAGTTCACAGTTTCAAGATGCCATAACCAGCTCCACGAGTCGAATGAAACTTATTGATTCCATGGAGGGAATTCTGAAAGGCATTCAACAAAAACTAGATAAGGTGCATCTCTCTCATCAAGAAGAGCAGCAGGTCTGCAATGCTTTAAAAGAGAAATATGCTGCAGCAACTGCAGAGCAAAGACGCTGCTATACCCTCTTAAAAGCTTTCCAGGAGGAATGTGCGAAGAACGAGAATCTTCGGGCCCAAAAGTCCATGTGAAAAGATTTAAGGCACCACCATTGCCGTGTTATAGCCTTCGTTCAATTCGGTCAATGTTAGATGGAGAATTTGTGACAATGGGAAAAGAAAGAAGAGATGGATTAGAGGACTTCAAAAGAGTTGAACTAATTCAAATGCTTCGTCCTATTGCAGCACCAAAGCTTGTAAGTCAAAATAATCTCCTTTAATGACTTTTGATCTGTAGTTACCTAACTTTTTTAAGGAACAGAGCTTGTGTGTGAATATTCCCACGTTCTCCTCCCTTTCATGCCTTTTGAATAGGATAAAAAACTTGTCAATGCATGTTTAAGAAAACATGCGGGGACATAATTGAAAGAGCCCTAATTTGGACGGATGTGGAGG

Coding sequence (CDS)

ATGTCTGAAGATAGCAAGAATCAGGTGGATTCTGATAATGGAGTTTCAAGGGAGACGCTAGAGGAGGATTTAGATGAATTGAACCTGAAGAAAGTTAAAATGTTGAAAGATTTGCAACTTTTACGAGATAGAGTCGCTAAGGCGGATGCTAATCATGTGGTGGAGAAGTTGATCTCATGCTCAAAGACTTTGGAGGACCTTGGAAAGCTGGAATCTGAATTCCTATCTACTTGTAATGTGAAGCGTAATAAGTTGCAAGATGAGATTATTGAGCTGGAGGGAAGATTGAAAGGAGACCACAATAGCTCAAGCTTCCTAGATAGCTTAGATACCTTGGTTTGTGAATCTCAGGAGGAATTGAATTCAGTAAACAAGGCGCTCGCATCTAGATTGAGGGAAACACTAGCATTAAAGAGGGTTCTTGAAGACGTGCCAGCCCAAGCTGAACTCATCCAGTATGAGCGTCGTTTTTCAGAGTTATATATTAACATCCAGGATAAACTTAGGCAAACACGCAGATACTATGCAACCTATAATGCACTCTTGGAGATGAAGGATCTGATGTTAAAGGAGACATCCTTATTAAATTCCTTAAGTTCACAGTTTCAAGATGCCATAACCAGCTCCACGAGTCGAATGAAACTTATTGATTCCATGGAGGGAATTCTGAAAGGCATTCAACAAAAACTAGATAAGGTGCATCTCTCTCATCAAGAAGAGCAGCAGGTCTGCAATGCTTTAAAAGAGAAATATGCTGCAGCAACTGCAGAGCAAAGACGCTGCTATACCCTCTTAAAAGCTTTCCAGGAGGAATGTGCGAAGAACGAGAATCTTCGGGCCCAAAAGTCCATGTGA

Protein sequence

MSEDSKNQVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDLGKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKALASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDLMLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNALKEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKSM

Homology

[Close]

BLAST of Sed0015375 vs. NCBI nr
Match: XP_038885583.1 (coiled-coil domain-containing protein 93 isoform X1 [Benincasa hispida] >XP_038885584.1 coiled-coil domain-containing protein 93 isoform X1 [Benincasa hispida])

HSP 1 Score: 417.2 bits (1071), Expect = 1.2e-112
Identity = 228/274 (83.21%), Postives = 245/274 (89.42%), Query Frame = 0


Query: 8   QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
           QVD DNGVS + L+ED+DELN KKV ++KDLQLL+DRV K DAN VV+ LISC KTLEDL
Sbjct: 26  QVDPDNGVSMDILKEDMDELNQKKVSIVKDLQLLQDRVNKVDAN-VVQNLISCLKTLEDL 85

Query: 68  GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
           GK ESEFLSTCN KR+KLQDEIIELEGRL G H  S+FLDSLD L+ ES+EELNSV KAL
Sbjct: 86  GKQESEFLSTCNSKRSKLQDEIIELEGRLTGYHECSNFLDSLDDLIRESEEELNSVKKAL 145

Query: 128 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
            S LRETLALKR+L+DVP Q ELIQYERRFSELYINIQDKLRQTRR+YATYNALLE+KDL
Sbjct: 146 TSSLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRFYATYNALLEIKDL 205

Query: 188 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
           MLKETSLLNS+SSQFQDAI SSTS+ KLIDSMEGILKGIQ KLDKVHLSHQEEQQVCNAL
Sbjct: 206 MLKETSLLNSISSQFQDAIASSTSQTKLIDSMEGILKGIQLKLDKVHLSHQEEQQVCNAL 265

Query: 248 KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQ 282
           KEKYA ATAEQRRCYTLLKAFQEECAKNE LR Q
Sbjct: 266 KEKYAVATAEQRRCYTLLKAFQEECAKNEKLRTQ 298

[Close]

BLAST of Sed0015375 vs. NCBI nr
Match: XP_038885585.1 (coiled-coil domain-containing protein 93 isoform X2 [Benincasa hispida] >XP_038885586.1 coiled-coil domain-containing protein 93 isoform X2 [Benincasa hispida])

HSP 1 Score: 417.2 bits (1071), Expect = 1.2e-112
Identity = 228/274 (83.21%), Postives = 245/274 (89.42%), Query Frame = 0


Query: 8   QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
           QVD DNGVS + L+ED+DELN KKV ++KDLQLL+DRV K DAN VV+ LISC KTLEDL
Sbjct: 21  QVDPDNGVSMDILKEDMDELNQKKVSIVKDLQLLQDRVNKVDAN-VVQNLISCLKTLEDL 80

Query: 68  GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
           GK ESEFLSTCN KR+KLQDEIIELEGRL G H  S+FLDSLD L+ ES+EELNSV KAL
Sbjct: 81  GKQESEFLSTCNSKRSKLQDEIIELEGRLTGYHECSNFLDSLDDLIRESEEELNSVKKAL 140

Query: 128 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
            S LRETLALKR+L+DVP Q ELIQYERRFSELYINIQDKLRQTRR+YATYNALLE+KDL
Sbjct: 141 TSSLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRFYATYNALLEIKDL 200

Query: 188 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
           MLKETSLLNS+SSQFQDAI SSTS+ KLIDSMEGILKGIQ KLDKVHLSHQEEQQVCNAL
Sbjct: 201 MLKETSLLNSISSQFQDAIASSTSQTKLIDSMEGILKGIQLKLDKVHLSHQEEQQVCNAL 260

Query: 248 KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQ 282
           KEKYA ATAEQRRCYTLLKAFQEECAKNE LR Q
Sbjct: 261 KEKYAVATAEQRRCYTLLKAFQEECAKNEKLRTQ 293

[Close]

BLAST of Sed0015375 vs. NCBI nr
Match: XP_022929770.1 (coiled-coil domain-containing protein 93 isoform X1 [Cucurbita moschata] >XP_022929771.1 coiled-coil domain-containing protein 93 isoform X1 [Cucurbita moschata])

HSP 1 Score: 413.7 bits (1062), Expect = 1.3e-111
Identity = 223/276 (80.80%), Postives = 245/276 (88.77%), Query Frame = 0


Query: 8   QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
           QVDSDNGVS + L+ED+DELN KKV ++KDLQ L+DRV+KA+ANHVV+ L+SC KTLEDL
Sbjct: 26  QVDSDNGVSMDILKEDVDELNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDL 85

Query: 68  GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
           GK ESE LS C+ +R KLQ EI ELEGRL GDH  S+FLDSLD  + ES+EELNSV KAL
Sbjct: 86  GKQESELLSPCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKAL 145

Query: 128 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
           ASRLRETLALKR+L+DVP Q ELIQYERRFSELYINIQDK RQTRRYYATYNALLE+KDL
Sbjct: 146 ASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDL 205

Query: 188 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
           MLKETSLLNS+SSQFQDAI +S S+MKLI+SMEGILKGIQQKLDKV LSHQEEQQVCNAL
Sbjct: 206 MLKETSLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNAL 265

Query: 248 KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKS 284
           KEKYAAATAEQRRCY LLKAFQEECAKNE LR Q S
Sbjct: 266 KEKYAAATAEQRRCYALLKAFQEECAKNEKLRTQNS 301

[Close]

BLAST of Sed0015375 vs. NCBI nr
Match: XP_023547315.1 (coiled-coil domain-containing protein 93 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547316.1 coiled-coil domain-containing protein 93 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023547318.1 coiled-coil domain-containing protein 93 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.4 bits (1056), Expect = 6.4e-111
Identity = 222/276 (80.43%), Postives = 245/276 (88.77%), Query Frame = 0


Query: 8   QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
           QVDSDNGVS + L+ED+DELN KKV ++KDLQ L+DRV+KA+ANHVV+ L+SC KTLEDL
Sbjct: 26  QVDSDNGVSMDILKEDVDELNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDL 85

Query: 68  GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
           GK ESE LS C+ +R KLQ EI ELEGRL GDH  S+FLDSLD  + ES+EELNSV KAL
Sbjct: 86  GKQESELLSPCDAQRIKLQAEIFELEGRLTGDHECSNFLDSLDNFISESEEELNSVKKAL 145

Query: 128 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
           ASRLRETLALKR+L+DVP Q ELIQYERRFSEL+INIQDK RQTRRYYATYNALLE+KDL
Sbjct: 146 ASRLRETLALKRLLDDVPTQTELIQYERRFSELFINIQDKHRQTRRYYATYNALLEIKDL 205

Query: 188 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
           MLKETSLLNS+SSQFQDAI +S S+MKLI+SMEGILKGIQQKLDKV LSHQEEQQVCNAL
Sbjct: 206 MLKETSLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNAL 265

Query: 248 KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKS 284
           KEKYAAATAEQRRCY LLKAFQEECAKNE LR Q S
Sbjct: 266 KEKYAAATAEQRRCYALLKAFQEECAKNEKLRTQTS 301

[Close]

BLAST of Sed0015375 vs. NCBI nr
Match: XP_022997448.1 (coiled-coil domain-containing protein 93 isoform X1 [Cucurbita maxima] >XP_022997449.1 coiled-coil domain-containing protein 93 isoform X1 [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 4.2e-110
Identity = 222/276 (80.43%), Postives = 243/276 (88.04%), Query Frame = 0


Query: 8   QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
           QVDSDNGVS + L+ED+DELN KKV + KDLQ L+DRV+KA+ANHVV+ L+SC KTLEDL
Sbjct: 26  QVDSDNGVSMDILKEDVDELNQKKVAVGKDLQFLQDRVSKANANHVVQNLMSCLKTLEDL 85

Query: 68  GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
           GK ESE LS C+ +R KLQ EI ELEGRL GDH  S+FLDSLD  + ES+EELNSV KAL
Sbjct: 86  GKQESELLSPCDAQRIKLQAEIFELEGRLTGDHECSNFLDSLDNFISESEEELNSVKKAL 145

Query: 128 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
           ASRLRETLALK +L+DVP Q ELIQYERRFSELYINIQDKLRQTRRYYATYNALLE+KDL
Sbjct: 146 ASRLRETLALKWLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDL 205

Query: 188 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
           MLKE SLLNS+SSQFQDAI +S S+MKLI+SMEGILKGIQQKLDKV LSHQEEQQVCNAL
Sbjct: 206 MLKEISLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNAL 265

Query: 248 KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKS 284
           KEKYAAATAEQRRCY LLKAFQEECAKNE LR Q S
Sbjct: 266 KEKYAAATAEQRRCYALLKAFQEECAKNEKLRTQNS 301

[Close]

BLAST of Sed0015375 vs. ExPASy Swiss-Prot
Match: Q640U7 (Coiled-coil domain-containing protein 93 OS=Xenopus tropicalis OX=8364 GN=ccdc93 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.6e-25
Identity = 83/276 (30.07%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 3   EDSKNQVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSK 62
           ++  +++ S  G +R+ L E    +     K+ ++L +L +  +KAD + V++KL     
Sbjct: 331 QEKASELQSGCGETRKQLTEVTSHME----KLDQELSVLENMESKADPS-VLQKLRDLVA 390

Query: 63  TLEDLGKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNS 122
             E L   E +F S C  + ++LQ  I  L+              + +      +E+L  
Sbjct: 391 QNESLKAQEQQFRSKCREEMSRLQQNIDGLKAAATEHGEEKEQTQAFEQQYKAEREKLQK 450

Query: 123 VNKALASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALL 182
           +   LA R RE   L+R +++VP++AEL QY++RF ELY  +    ++T++++  YN L 
Sbjct: 451 IRLLLARRNREIAILQRKIDEVPSRAELTQYQKRFIELYGQVSATHKETKQFFTLYNTLD 510

Query: 183 EMKDLMLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQ 242
           + K  + KE +LLNS+   FQ A+ S ++R + +  ME I+ GI+Q  +K+    QE + 
Sbjct: 511 DKKVYLEKEVNLLNSIHDNFQQAMASPSARDQFLRQMEQIVDGIRQSRNKMEKKKQENKM 570

Query: 243 VCNALKEKYAAATAEQRRCYTLLKAFQEECAKNENL 279
             + L ++Y     +QR  +  +K F+EEC KNE L
Sbjct: 571 KRDQLNDEYLELLEKQRLYFKTVKEFKEECRKNETL 601

[Close]

BLAST of Sed0015375 vs. ExPASy Swiss-Prot
Match: Q5ZKI4 (Coiled-coil domain-containing protein 93 OS=Gallus gallus OX=9031 GN=CCDC93 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 81/258 (31.40%), Postives = 137/258 (53.10%), Query Frame = 0


Query: 21  EEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDLGKLESEFLSTCNV 80
           ++ L E+     K+ K+L  L    ++AD++ V++ L       E+L   E EF + C  
Sbjct: 352 KKTLTEVESYSEKLDKELAALETIESQADSS-VLQNLRMLVAINENLKSQEQEFKAHCRE 411

Query: 81  KRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKALASRLRETLALKRV 140
           +  +LQ +I  L+     +         +D      +E+L  +   LA R RE   L+R 
Sbjct: 412 EMERLQQDIENLKAEAAENGEEEEPNKLIDQQYQTEKEKLQKIRLLLARRNREIAILQRK 471

Query: 141 LEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDLMLKETSLLNSLSS 200
           +++VP++AEL QY++RF ELY  +    ++T++++  YN L + K  + KE +LLNS+  
Sbjct: 472 IDEVPSRAELTQYQKRFIELYSQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSIHD 531

Query: 201 QFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNALKEKYAAATAEQRR 260
            F  A+ SS SR + +  ME I++GI+Q   K+    QE +   + L ++Y     +QR 
Sbjct: 532 NFHQAMASSGSREQFLRQMEQIVEGIKQNRMKMEKKKQENKMRRDQLNDEYLELLEKQRL 591

Query: 261 CYTLLKAFQEECAKNENL 279
            +  +K F+EEC KNE L
Sbjct: 592 YFKTVKEFKEECRKNEML 608

[Close]

BLAST of Sed0015375 vs. ExPASy Swiss-Prot
Match: Q6GQI5 (Coiled-coil domain-containing protein 93 OS=Xenopus laevis OX=8355 GN=ccdc93 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.1e-23
Identity = 78/258 (30.23%), Postives = 134/258 (51.94%), Query Frame = 0


Query: 21  EEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDLGKLESEFLSTCNV 80
           ++ L E+      + ++L +L    +KAD + V++KL       E L   E +F S C  
Sbjct: 344 KKQLTEVTSHMENLEQELLVLEKVESKADPS-VLQKLRDLVAQNESLKLQEQQFRSKCRE 403

Query: 81  KRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKALASRLRETLALKRV 140
           + ++LQ  I  L+              + +      +E+L  +   LA R RE   L R 
Sbjct: 404 EMSRLQQNIDSLKAAATEHGEEKEQSQAFEQQYKAEKEKLQKIRLLLARRNREIAILHRK 463

Query: 141 LEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDLMLKETSLLNSLSS 200
           +++VP++AEL QY++RF ELY  +    ++T++++  YN L + K  + KE +LLNS+  
Sbjct: 464 IDEVPSRAELTQYQKRFIELYGQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSVHD 523

Query: 201 QFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNALKEKYAAATAEQRR 260
            FQ A+ S + R + +  ME I+ GI+Q  +K+    QE +   + L ++Y     +QR 
Sbjct: 524 NFQQAMASPSVRDQFLRQMEQIVDGIRQSRNKMEKKKQENKMKRDQLNDEYLELLEKQRL 583

Query: 261 CYTLLKAFQEECAKNENL 279
            +  +K F+EEC +NE L
Sbjct: 584 YFKTVKEFREECRRNETL 600

[Close]

BLAST of Sed0015375 vs. ExPASy Swiss-Prot
Match: Q567U6 (Coiled-coil domain-containing protein 93 OS=Homo sapiens OX=9606 GN=CCDC93 PE=1 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 2.2e-21
Identity = 85/273 (31.14%), Postives = 139/273 (50.92%), Query Frame = 0


Query: 21  EEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDLGKLESEFLSTCNV 80
           ++ L EL     K+ K+   L    +KAD + +++ L +     E+L   E EF + C  
Sbjct: 351 KKTLTELKTYSEKLDKEQAALEKIESKADPS-ILQNLRALVAMNENLKSQEQEFKAHCRE 410

Query: 81  KRNKLQDEI--IELEGRLKGDHNSSS-------------FLDSLDTLVCESQEELNSVNK 140
           +  +LQ EI  ++ E   +GD  + S               + LD      +E+L  +  
Sbjct: 411 EMTRLQQEIENLKAERAPRGDEKTLSSGEPPGTLTSAMTHDEDLDRRYNMEKEKLYKIRL 470

Query: 141 ALASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMK 200
             A R RE   L R +++VP++AELIQY++RF ELY  I    ++T++++  YN L + K
Sbjct: 471 LQARRNREIAILHRKIDEVPSRAELIQYQKRFIELYRQISAVHKETKQFFTLYNTLDDKK 530

Query: 201 DLMLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCN 260
             + KE SLLNS+   F  A+ S  +R + +  ME I++GI+Q   K+    QE +   +
Sbjct: 531 VYLEKEISLLNSIHENFSQAMASPAARDQFLRQMEQIVEGIKQSRMKMEKKKQENKMRRD 590

Query: 261 ALKEKYAAATAEQRRCYTLLKAFQEECAKNENL 279
            L ++Y     +QR  +  +K F+EE  KNE L
Sbjct: 591 QLNDQYLELLEKQRLYFKTVKEFKEEGRKNEML 622

[Close]

BLAST of Sed0015375 vs. ExPASy Swiss-Prot
Match: Q5BJT7 (Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 86/271 (31.73%), Postives = 137/271 (50.55%), Query Frame = 0


Query: 21  EEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDLGKLESEFLSTCNV 80
           ++ L EL     K+ ++   L    AKAD + +++ L +     E L   E EF + C  
Sbjct: 351 KKTLTELKNHGEKLDQEQAALEKLEAKADPS-ILQNLRALVAMNESLKSQEQEFKAHCRE 410

Query: 81  KRNKLQDEIIELEG-RLKGDHNSSS------------FLDSLDTLVCESQEELNSVNKAL 140
           +  +LQ EI  L+  R  G+   SS              + LD      +E+L  +    
Sbjct: 411 EMARLQQEIEILKAERAPGEKTISSGEPQGALTSTMTHNEDLDRRYNMEKEKLYKIRLLQ 470

Query: 141 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 200
           A R RE   L R +++VP++AELIQY++RF ELY  I    ++T++++  YN L + K  
Sbjct: 471 ARRNREIAILHRKIDEVPSRAELIQYQKRFIELYRQISAVHKETKQFFTLYNTLDDKKVY 530

Query: 201 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 260
           + KE SLLNS+   F  A+ S  +R + +  ME I++GI+Q   K+    QE +   + L
Sbjct: 531 LEKEISLLNSIHENFSQAMASPAARDQFLRQMEQIVEGIKQSRMKMEKKKQENKMRRDQL 590

Query: 261 KEKYAAATAEQRRCYTLLKAFQEECAKNENL 279
            ++Y     +QR  +  +K F+EE  KNE L
Sbjct: 591 NDQYLELLEKQRLYFKTVKEFKEEGRKNELL 620

[Close]

BLAST of Sed0015375 vs. ExPASy TrEMBL
Match: A0A6J1EP31 (coiled-coil domain-containing protein 93 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436260 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 6.3e-112
Identity = 223/276 (80.80%), Postives = 245/276 (88.77%), Query Frame = 0


Query: 8   QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
           QVDSDNGVS + L+ED+DELN KKV ++KDLQ L+DRV+KA+ANHVV+ L+SC KTLEDL
Sbjct: 26  QVDSDNGVSMDILKEDVDELNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDL 85

Query: 68  GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
           GK ESE LS C+ +R KLQ EI ELEGRL GDH  S+FLDSLD  + ES+EELNSV KAL
Sbjct: 86  GKQESELLSPCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKAL 145

Query: 128 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
           ASRLRETLALKR+L+DVP Q ELIQYERRFSELYINIQDK RQTRRYYATYNALLE+KDL
Sbjct: 146 ASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDL 205

Query: 188 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
           MLKETSLLNS+SSQFQDAI +S S+MKLI+SMEGILKGIQQKLDKV LSHQEEQQVCNAL
Sbjct: 206 MLKETSLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNAL 265

Query: 248 KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKS 284
           KEKYAAATAEQRRCY LLKAFQEECAKNE LR Q S
Sbjct: 266 KEKYAAATAEQRRCYALLKAFQEECAKNEKLRTQNS 301

[Close]

BLAST of Sed0015375 vs. ExPASy TrEMBL
Match: A0A6J1KBC9 (coiled-coil domain-containing protein 93 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492362 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.0e-110
Identity = 222/276 (80.43%), Postives = 243/276 (88.04%), Query Frame = 0


Query: 8   QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
           QVDSDNGVS + L+ED+DELN KKV + KDLQ L+DRV+KA+ANHVV+ L+SC KTLEDL
Sbjct: 26  QVDSDNGVSMDILKEDVDELNQKKVAVGKDLQFLQDRVSKANANHVVQNLMSCLKTLEDL 85

Query: 68  GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
           GK ESE LS C+ +R KLQ EI ELEGRL GDH  S+FLDSLD  + ES+EELNSV KAL
Sbjct: 86  GKQESELLSPCDAQRIKLQAEIFELEGRLTGDHECSNFLDSLDNFISESEEELNSVKKAL 145

Query: 128 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
           ASRLRETLALK +L+DVP Q ELIQYERRFSELYINIQDKLRQTRRYYATYNALLE+KDL
Sbjct: 146 ASRLRETLALKWLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDL 205

Query: 188 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
           MLKE SLLNS+SSQFQDAI +S S+MKLI+SMEGILKGIQQKLDKV LSHQEEQQVCNAL
Sbjct: 206 MLKEISLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNAL 265

Query: 248 KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKS 284
           KEKYAAATAEQRRCY LLKAFQEECAKNE LR Q S
Sbjct: 266 KEKYAAATAEQRRCYALLKAFQEECAKNEKLRTQNS 301

[Close]

BLAST of Sed0015375 vs. ExPASy TrEMBL
Match: A0A1S3BCQ6 (coiled-coil domain-containing protein 93 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488264 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.1e-107
Identity = 221/274 (80.66%), Postives = 240/274 (87.59%), Query Frame = 0


Query: 8   QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
           QVD DNGVS   L+ED+DEL+ KKV M+KDLQLLRDRV K DAN VV+ L+SC KTLEDL
Sbjct: 26  QVDPDNGVSM-VLKEDMDELDQKKVAMVKDLQLLRDRVDKVDAN-VVQNLMSCLKTLEDL 85

Query: 68  GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
           GK ESEFLST N KR++LQDEIIEL GRL GDH  S+F DSLD L+  S+EEL+SV KAL
Sbjct: 86  GKQESEFLSTSNSKRSELQDEIIELGGRLTGDHECSNFFDSLDDLISASEEELDSVKKAL 145

Query: 128 ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
            S +RETLALKR+L+DVP Q ELIQYERRFSELYINIQDKLRQTRRYYATYNALLE+KDL
Sbjct: 146 MSSVRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDL 205

Query: 188 MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
           MLKETSLLNS+SSQFQDAI SS S+MKLIDSM GILKGIQQKLDKV+LSHQEEQQVCNAL
Sbjct: 206 MLKETSLLNSISSQFQDAIASSASKMKLIDSMVGILKGIQQKLDKVNLSHQEEQQVCNAL 265

Query: 248 KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQ 282
           KEKYAAA  EQRRCYTLLKAFQEECAKNE LR Q
Sbjct: 266 KEKYAAAAVEQRRCYTLLKAFQEECAKNEKLRTQ 297

[Close]

BLAST of Sed0015375 vs. ExPASy TrEMBL
Match: A0A5A7VD59 (Transcriptional corepressor LEUNIG isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002880 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 6.1e-107
Identity = 220/274 (80.29%), Postives = 239/274 (87.23%), Query Frame = 0


Query: 8    QVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLEDL 67
            Q D DNGVS   L+ED+DEL+ KKV M+KDLQLLRDRV K DAN VV+ L+SC KTLEDL
Sbjct: 869  QADPDNGVSM-VLKEDMDELDQKKVAMVKDLQLLRDRVDKVDAN-VVQNLMSCLKTLEDL 928

Query: 68   GKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKAL 127
            GK ESEFLST N KR++LQDEIIEL GRL GDH  S+F DSLD L+  S+EEL+SV KAL
Sbjct: 929  GKQESEFLSTSNSKRSELQDEIIELGGRLTGDHECSNFFDSLDDLISASEEELDSVKKAL 988

Query: 128  ASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDL 187
             S +RETLALKR+L+DVP Q ELIQYERRFSELYINIQDKLRQTRRYYATYNALLE+KDL
Sbjct: 989  MSSVRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDL 1048

Query: 188  MLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNAL 247
            MLKETSLLNS+SSQFQDAI SS S+MKLIDSM GILKGIQQKLDKV+LSHQEEQQVCNAL
Sbjct: 1049 MLKETSLLNSISSQFQDAIASSASKMKLIDSMVGILKGIQQKLDKVNLSHQEEQQVCNAL 1108

Query: 248  KEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQ 282
            KEKYAAA  EQRRCYTLLKAFQEECAKNE LR Q
Sbjct: 1109 KEKYAAAAVEQRRCYTLLKAFQEECAKNEKLRTQ 1140

[Close]

BLAST of Sed0015375 vs. ExPASy TrEMBL
Match: A0A6J1BSB1 (coiled-coil domain-containing protein 93 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004933 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 6.7e-106
Identity = 218/277 (78.70%), Postives = 239/277 (86.28%), Query Frame = 0


Query: 8   QVDSDN-GVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCSKTLED 67
           QVDS+N GVS +  +E  DELN KKV ++KDLQLLR+R  KADA+HVV+ L+SCSKTLED
Sbjct: 26  QVDSNNEGVSMKMSKEGSDELNQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLED 85

Query: 68  LGKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKA 127
           L K ES+FL TCN KR KLQDEIIELEGRL  DH+ SS LDSLD L+ ESQEELNSV K 
Sbjct: 86  LEKQESKFLHTCNAKRYKLQDEIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKE 145

Query: 128 LASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKD 187
           LASRLRETLALKR+L+DVP Q ELIQYERRFSELYINIQDKLRQTRRYYATYNA LE+KD
Sbjct: 146 LASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNAHLEIKD 205

Query: 188 LMLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNA 247
           LMLKETSLL S+SSQFQDAITS TS+MKLIDSMEGILKGI QKLDKV LS + EQQ CNA
Sbjct: 206 LMLKETSLLKSISSQFQDAITSPTSQMKLIDSMEGILKGILQKLDKVDLSREAEQQACNA 265

Query: 248 LKEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKS 284
           LKEKY+AAT+EQRRCYTLLKAFQEEC KNE LR + S
Sbjct: 266 LKEKYSAATSEQRRCYTLLKAFQEECVKNERLRTENS 302

[Close]

BLAST of Sed0015375 vs. TAIR 10
Match: AT4G32560.1 (paramyosin-related )

HSP 1 Score: 241.9 bits (616), Expect = 6.3e-64
Identity = 145/282 (51.42%), Postives = 194/282 (68.79%), Query Frame = 0


Query: 2   SEDSKNQVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCS 61
           SE  +  V +     RE L   + E N +K      LQ LR+R++K   +  V++LI   
Sbjct: 20  SEQPEEMVTNLKASVRE-LSVKVKEQNQRKCDAKDKLQQLRERISKEVVDVSVQELIPLL 79

Query: 62  KTLEDLGKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELN 121
           ++L++  K ESE  S CNVKR+ L+D + +LE R     +     + LD L+  S + L 
Sbjct: 80  RSLKEFVKEESEVRSRCNVKRSALEDAVHDLEERAGKGLDGEIQEEDLDGLLVVSLDNLT 139

Query: 122 SVNKALASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNAL 181
           S  K L + LRE ++LKR ++DVP Q+EL+QYERRFSEL + IQ+KL+QTR+ YATYNAL
Sbjct: 140 SAKKELGATLREIVSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKLYATYNAL 199

Query: 182 LEMKDLMLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQ 241
           LE+KDLMLKETSLLNS+ SQFQD I +   R+KLIDSMEG++KGIQQK+ K+ L  QEEQ
Sbjct: 200 LEIKDLMLKETSLLNSIGSQFQDVIGTPAGRVKLIDSMEGVMKGIQQKIGKIQLGLQEEQ 259

Query: 242 QVCNALKEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKS 284
           ++ +A KEKY AA AEQR+CYT+L+A+QEEC KNE LR+  S
Sbjct: 260 RLRDASKEKYIAAAAEQRKCYTVLRAYQEECTKNERLRSHIS 300

[Close]

BLAST of Sed0015375 vs. TAIR 10
Match: AT4G32560.2 (paramyosin-related )

HSP 1 Score: 241.9 bits (616), Expect = 6.3e-64
Identity = 145/282 (51.42%), Postives = 194/282 (68.79%), Query Frame = 0


Query: 2   SEDSKNQVDSDNGVSRETLEEDLDELNLKKVKMLKDLQLLRDRVAKADANHVVEKLISCS 61
           SE  +  V +     RE L   + E N +K      LQ LR+R++K   +  V++LI   
Sbjct: 20  SEQPEEMVTNLKASVRE-LSVKVKEQNQRKCDAKDKLQQLRERISKEVVDVSVQELIPLL 79

Query: 62  KTLEDLGKLESEFLSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELN 121
           ++L++  K ESE  S CNVKR+ L+D + +LE R     +     + LD L+  S + L 
Sbjct: 80  RSLKEFVKEESEVRSRCNVKRSALEDAVHDLEERAGKGLDGEIQEEDLDGLLVVSLDNLT 139

Query: 122 SVNKALASRLRETLALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNAL 181
           S  K L + LRE ++LKR ++DVP Q+EL+QYERRFSEL + IQ+KL+QTR+ YATYNAL
Sbjct: 140 SAKKELGATLREIVSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKLYATYNAL 199

Query: 182 LEMKDLMLKETSLLNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQ 241
           LE+KDLMLKETSLLNS+ SQFQD I +   R+KLIDSMEG++KGIQQK+ K+ L  QEEQ
Sbjct: 200 LEIKDLMLKETSLLNSIGSQFQDVIGTPAGRVKLIDSMEGVMKGIQQKIGKIQLGLQEEQ 259

Query: 242 QVCNALKEKYAAATAEQRRCYTLLKAFQEECAKNENLRAQKS 284
           ++ +A KEKY AA AEQR+CYT+L+A+QEEC KNE LR+  S
Sbjct: 260 RLRDASKEKYIAAAAEQRKCYTVLRAYQEECTKNERLRSHIS 300

[Close]

BLAST of Sed0015375 vs. TAIR 10
Match: AT4G32560.3 (paramyosin-related )

HSP 1 Score: 241.9 bits (616), Expect = 6.3e-64
Identity = 141/269 (52.42%), Postives = 191/269 (71.00%), Query Frame = 0


Query: 20  LEEDLDELNLKKVKMLK-----DLQLLRDRVAKADANHVVEKLISCSKTLEDLGKLESEF 79
           L+  + EL++K  +  K      LQ LR+R++K   +  V++LI   ++L++  K ESE 
Sbjct: 30  LKASVRELSVKVKEQRKCDAKDKLQQLRERISKEVVDVSVQELIPLLRSLKEFVKEESEV 89

Query: 80  LSTCNVKRNKLQDEIIELEGRLKGDHNSSSFLDSLDTLVCESQEELNSVNKALASRLRET 139
            S CNVKR+ L+D + +LE R     +     + LD L+  S + L S  K L + LRE 
Sbjct: 90  RSRCNVKRSALEDAVHDLEERAGKGLDGEIQEEDLDGLLVVSLDNLTSAKKELGATLREI 149

Query: 140 LALKRVLEDVPAQAELIQYERRFSELYINIQDKLRQTRRYYATYNALLEMKDLMLKETSL 199
           ++LKR ++DVP Q+EL+QYERRFSEL + IQ+KL+QTR+ YATYNALLE+KDLMLKETSL
Sbjct: 150 VSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKLYATYNALLEIKDLMLKETSL 209

Query: 200 LNSLSSQFQDAITSSTSRMKLIDSMEGILKGIQQKLDKVHLSHQEEQQVCNALKEKYAAA 259
           LNS+ SQFQD I +   R+KLIDSMEG++KGIQQK+ K+ L  QEEQ++ +A KEKY AA
Sbjct: 210 LNSIGSQFQDVIGTPAGRVKLIDSMEGVMKGIQQKIGKIQLGLQEEQRLRDASKEKYIAA 269

Query: 260 TAEQRRCYTLLKAFQEECAKNENLRAQKS 284
            AEQR+CYT+L+A+QEEC KNE LR+  S
Sbjct: 270 AAEQRKCYTVLRAYQEECTKNERLRSHIS 298

The following BLAST results are available for this feature:

BLAST of Sed0015375 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885583.1	1.2e-112	83.21	coiled-coil domain-containing protein 93 isoform X1 [Benincasa hispida] >XP_0388...	[more]
XP_038885585.1	1.2e-112	83.21	coiled-coil domain-containing protein 93 isoform X2 [Benincasa hispida] >XP_0388...	[more]
XP_022929770.1	1.3e-111	80.80	coiled-coil domain-containing protein 93 isoform X1 [Cucurbita moschata] >XP_022...	[more]
XP_023547315.1	6.4e-111	80.43	coiled-coil domain-containing protein 93 isoform X1 [Cucurbita pepo subsp. pepo]...	[more]
XP_022997448.1	4.2e-110	80.43	coiled-coil domain-containing protein 93 isoform X1 [Cucurbita maxima] >XP_02299...	[more]

BLAST of Sed0015375 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q640U7	5.6e-25	30.07	Coiled-coil domain-containing protein 93 OS=Xenopus tropicalis OX=8364 GN=ccdc93...	[more]
Q5ZKI4	1.6e-24	31.40	Coiled-coil domain-containing protein 93 OS=Gallus gallus OX=9031 GN=CCDC93 PE=2...	[more]
Q6GQI5	3.1e-23	30.23	Coiled-coil domain-containing protein 93 OS=Xenopus laevis OX=8355 GN=ccdc93 PE=...	[more]
Q567U6	2.2e-21	31.14	Coiled-coil domain-containing protein 93 OS=Homo sapiens OX=9606 GN=CCDC93 PE=1 ...	[more]
Q5BJT7	1.4e-20	31.73	Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93...	[more]

BLAST of Sed0015375 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP31	6.3e-112	80.80	coiled-coil domain-containing protein 93 isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1KBC9	2.0e-110	80.43	coiled-coil domain-containing protein 93 isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A1S3BCQ6	2.1e-107	80.66	coiled-coil domain-containing protein 93 isoform X3 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5A7VD59	6.1e-107	80.29	Transcriptional corepressor LEUNIG isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1BSB1	6.7e-106	78.70	coiled-coil domain-containing protein 93 isoform X1 OS=Momordica charantia OX=36...	[more]

BLAST of Sed0015375 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32560.1	6.3e-64	51.42	paramyosin-related	[more]
AT4G32560.2	6.3e-64	51.42	paramyosin-related	[more]
AT4G32560.3	6.3e-64	52.42	paramyosin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 237..257
None	No IPR available	COILS	Coil	Coil	coord: 17..44
None	No IPR available	COILS	Coil	Coil	coord: 75..95
None	No IPR available	PANTHER	PTHR16441:SF0	COILED-COIL DOMAIN-CONTAINING PROTEIN 93	coord: 16..282
IPR039116	Coiled-coil domain-containing protein 93	PANTHER	PTHR16441	FIDIPIDINE	coord: 16..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015375.1	Sed0015375.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003714	transcription corepressor activity