Sed0015348 (gene) Chayote v1

Overview


Name	Sed0015348
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG01: 18205072 .. 18224277 (+)
RNA-Seq Expression	Sed0015348
Synteny	Sed0015348

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGAACAAAGATTCAATGGCCAAGTGATAGGAGAGGCAACTTCTGAAAGTTGAAGATTGATTCCTTTAAGAGGAGAAACCCTACTTTTAGACGAACAGAATTCGGCTGAAGATCAAGAATCAAGTTCATGGATTTCTTCAAATTGCATTCAGAATTTGGTGTTTACTGAGCTCTCGTCGCCGTTCTTGCGGGGAAGACCATGCATAGGCAAGTCGAACTCATTCCACCACACGTTAGCAGCTTCAATCGCCCTAACTTAGTTTTCTCCTTTGCATTTTTCTTCAGGGCGAGGTCTCGTTTTGGATCAATAGCTGATTCGCTATACAGATTCAAGCCGGACGAACATGTAAGTATCTTTTCTCTGTAATTGAGAGCTTACTTAAGTGGCCAACTGATTCAGTTGATGCATAATTTTTCTTGATAGAATTGCCAAACATGGGCATTGTGAACAGGAACTTATCTTTGATTGGCCCTACAGTAGCCTAGTTCCAATGTCATGATGAATAACAGAATTTAAAAAGAATAGAAATCATATTTGGTTAGCATTTCTGAGAATGAGTTTATTGTTAAATACTAGGTAAGTGGCTACTGATTTCTTAGTGACATATTTGACTAAGATTAGTCAAATGCACGTATCTGGGCTAAAAAACCAGGGATATTTAGAAATGTGTGTGTGTTTTTTTTTTAATATTCATGAATGATGAGTGTGCACCTCAACTAGTTTCATAGAACAATCACCCTACTTAGTACATTTGGCAATCAAGATAACAGAAAATTGGAGTTTTGTCCCACTACATGCAGTAAAACCTACGCCCTCCCATTCCAAGGCCAAGATTCGAGAGAAAACAAGAGATTTTACAATTAAGCTTAGTCTAGGTTTTAAACTTGGGACCTCCAAAGGAACATATCTTGGAGATTGCTTGCTTCTACTAAAAAGGCCGCTCTTGGGGTATCGAATTAATTTATATTCTCATAATATTAATAAATCTATATGTTAGCTGGAATTTTAGGCCATGTAGGAGTTTCCATTAAATTTTATGAGTTTTTATTTGTTCTTCTTATTACCATCAGTCTTGCAACAGGGGCGAAGGCAGGAGGCTAGCAGATTGGTATTCCATCGGGCTTTTCTCATATCCAAAGGTAATTTATGGAAAATAAGTTGTTTGAATACTTCCTGTTTTGCAAAATGAGTGAATTAATCTTGTTTATTGGACGTAGTATATATAAATTGGTCTTCTTACGTTTTCTTACAACTCAAAGCTTGGAAAAGAGTTTGTTATATGATAGGTTTTCTGTCTGCACATGCAATCAAATTTTGTATATTAATATGGCATGAATGTATAGTTGAAAAGGGTGAAACTTCTTAAAGTTCCCCACGTGTGGAAAATGTTGACATATTAATGTTTCAGTGTAGGTAGTCAATTTTTGGTAAATGGAGCAGAGTCAACTAAGTTCATGCAGATGCGGATAGTTAATGCACTTTGCCTGGGTGATAGAAGTGGTGCTTCCAACATGCTTATAGAACTTGGCCAGGAAAAACTCTCTTTAACTGCAGATAATTTTGTTCGCATTTTGAGCTACTGTGCGAAATCACCTGATCCATTGGTAGGTTTTATGTTCTTTGTTATCATTTATTGTATCTCATTCTCATGATATTACTTTTTAAACTAAGGGTGTTGAGAGAGCAGATTGTGTTTGCATATTTGATGCACTTTGAATAAGCGTCAAACTTAAAGTGCTATTTGGCCTACCCATTTCACTGGCTAGCCAAGGAGAAATAATGAAATAAAGATCTTGTGTTTAGGCTGTACATGAGTATTTATTTACGTGCACCGAATTGAATTCTACCAAATGAGCCCATAAAATGTGCGGAAGACTTTAACTCCTCCCATTGATTCTAATGGAATCGGGTATAAATGGAAGCTTAAGTTAAGTATTCAATAGACAGCCTTAACCTGTCTAGTTTCCTCCTCCCTCTACATTACTCTACCTTGGCCCTTGACTAACTCACATTTCCACCTGGAGAATTAGGAACCAGCCCTTAATTTAACCATATCTAACTAAGACTATAACTTCCATAAATTTTTTTGATCTAATCCTCACCCTTTTCTAGTTGCTTTTCGCTCTCATCGATCAAGCAAATATGATATGCATTGGGCCATAGTTTAAAATATTGGTTTTATGGTTTAGAGTATCTATCTAAGAATTCAACATCATTAAATTATGACATGCTGGCATACCTCATGCTAGTATTCAATGACAAGAACGATGACAACCTTATTATTTTCTCTAAATTGATAAGTATTTTCCAGCGTGAAGCTATATCAGTTATGTTAAATCATCAATCTGATAGGATCTACCACTTTATTAAGATAAATCTCTCGAGAGATTCTCTCAAAGAGCAAGAGTACAAAAGACGACAACTGAATGATTAACAAAGACCTAACCTCTCCTATTTATAACCCTAAACCCTAATTTAACCTAATTTAATAAAAGACTAATAATAGGCCCAAGCCCAATACAGTTAAAATAACAATTAACTAATAAATAATAAATACTAATACTAATATTCCTAAAAACTCCAAGGGCCAGATCGTATGAATACTTTTCCCCCCAATAGCCACCTTGTCCTCAAGGTGTTCCATCTCCGATGCCATCTTCTGCAGCTCCGTCTTCTGGCGAAAGTCTGTCGCATCAACATCCTGGTAATCGTGCGCATCCTGGACGACCCACACATCCAAGTTCTGGAGTTCTTTCTTCTGACAACGATGTCCCAAGACAAATCGTTCATCACATCGGAAGCATAACCCTTTGTCCTTCCTTGCTCGAATTTCGGCTTCAGTGAGATTTTTACAAGACGCCGGGTGAACGGCTGTAGTCCTGTGGGAAAAAGTCTTTGTGCTTTCAGTTCCCGATACAATTGTTCATGTTTTAGCTTTGACCGTCGTAGAAGTACTTCCCTCGTTTTGGGCAGCCTGAAAAGCAAAATCATCCTCAATCACTTGGGCCATAAACATTTTCTCTTTGATGCCCACTGGTCACAGTTTACGCATCGCGCTTTGTATCTCCTATTCCAGTCCACTTTCCCACTTCCGCATCGCGCATTCCCTTAGCAAAGCGCTTAAAGCTCCGACGATATTCCTTCACCGTTCCTATTTGCTTCAAACTCTTGAAGTTGGCATACTTATTCGCCTGAGCAATCGGTTGAAAATGCTCCAACAACCCGTCTTTGAATTCGTTCCAGGACGAAAAGGAGCACGGTCTTCCTCATACTCAAGCCACTCCAATGCTTCCCCTTCTAAACATAACCCCGCTGCCTCAACCCCTTCATATTCAGTCAGCTTGTTTACCAGGAAATAACGTTCGACCCGGCTCAACCATCCCACCGGATCCTCATCAGCAAGACCCTTGAAAACTGACATCTCCAATTTTCTAAATCTCCTGACATATCCTGGTCCCTCCCTTCCTGCAGCTCTCTGACCTCCCCTTTCAAATCTTTATTCTCCCCTCCGCCAAAATTCATGTCCCGTATTTCGGAAATTGTCACCCCAACCACGATCGTTCCAACCTTCATGCACCAACGGCCTATCGTAGCCGATACGCACCCTTCTCTCCTCTAGAACCCCATTTCCCCTCCTATCGACCCTAGGATCTCCTCTTTGATCGAACTCTGGTCCCGATAGATCGTCACCCCAATTTTGGCCTCGATCGTTCCAACCGTCATGCGCTAACGGCCTATCATAGCCGATGCGCACTATCCTCTCTTCCACTAACCCGTCGCCCCTTCGGTCAAACCTAGAATTTCCCTAACGATCGAATTCCGGTCTCCTTAAATTTCCCACGTCGGCTAGTTCGGTCCACCCATCTCCACGATCCGTTCAGCCCCACCCGGTCCTGTCGACCCGCGCGCACCCCATTCACGCTTGCGTCCCAGCCCCCGACGGCACCCCGACCCCACACCTGCACTCCATCACAAGCCACCCGCACCCGACCAGCCACCCACGCCCGCCGTTGCGCGCTGCTCCACAACCGCGCCGCCCCAACCCTTCATGCCCGCCGCCGCACCAGCAGCTGCTACTTCGCCTCCGCAACCACGCCTACCGCCGCTTGCTCGCGTGCGCCCCCTGCTTTCGGGTCGGTTGTTTCCTCCGTCTCGGGCTTTAAGTTTTCTTCGATTTCGATCAATACCCCCTTTCCTTTGTTCGTCTTGTTCGTCTCGGTATTCGGCTGCCCTGACATACGTTCAAACCACATCTGAAAATTACAGTTCATCTGTTCGAATTTCGAATTAAGTTGCTCGAATTTTGAATCAATCCTTTGCCCTAACAGTTCCTCCATTGATTCCATCTTCGCTTCCAATTCCTGTTGTTTATTCAACAAATCGGCTGATTTTTCTTCGCATTCTTGAATCCTTGTTTCCATCCTAGTCGAGACCATTCCTGGATCGGCAAACGGCTCTGATACTAAAATGATAGAATCTACCACTTTATTAAGATAAATCTCTCGAGAGGATCTCTCAAAGAGGTAGAGTACAAAAGACGACAACTGAATGAATAACAAAGACCTAACCTCTCCTATTTATAACCCTAAACCCTAATTTAATAAAAGACTAATAATAGGCTCAAACCCAATACAGTTAAAATAGCATTTAACTAATAAATATTAAATACTAATACTAATATTCCTAAAAAGTCCAAGGGCCGGATCGTATCACAATCAACCTAAAAACTTAAGTTAATAGGTTGAGATAAATTTTAATTATATCAACAAACACTCTTCCTCACATGTGGATTTGAAAATTTAAAAAATGCTCAACTAGTGGAATTCAACATTAATTGGGCAGCAAATGACTTTATAGGGGTCAAACTCAAGATCTCATGTTCTGATAACATGTTGAATCACCACTCAACTAAAAAACTTAAGTTATCCTTAAAAAGAAACTAAAGAACATAAGATAGATTGTGGTAAGTTTTAATTATATCAACCAACAACTATGTATCTTTCTTTTCCTTGCAGTTTAGCATGGAAACTTGGAAAATAATGGAGGAAAGAGGAATCTTCCTAAATCATACATGCTCCTTACTCATGATAGAAGCACTCTGTAAAGGGGGTTACTTAGATGAGGTATAAGCCTATTATATATATTAAGATTGTATGCAATATTTTTTTCTACACATCCAGTTTCAGTTAACAATTTTCTCCTGTTGTAATAACGCAGGCGTTTGGTTTAATAAATTTCCTAGCAGAAAGTCATGCCATGTTTCCTGTTCTTCCTGTGTACAATTGTTTTTTGAGAGCCTGTGCCAAAAGGCAAAGTATGGTTCATGTTAGTCGGTGCTTGGATCTGATGGATCACAAAATGGTTGGAAAGAATGAATCTACATACTCCGAGCTACTTAAGGTATGCAAGGAGCCTGTTTCCCTTTCATTTTTATAAGCTATATTTCAAGTGTTTTTGTGTCTTAGATTTCTTCTAAACTGGTGATCATCATTCAAATACTTGGTTTTTTTGTGCATTGTACTTTTGCACCAAAATTGGATCTATCATAGGCTTCTGAGTATCAATTTTGCGGGTAAATAATAATAAGAAATTGATGTAGATATGATTCTCCATGCCCTCTTGTTGAGCCTGATAAGAACATATCGGTTCATCAAGGAGTATCTCTACAGAATAAAATGGATCGTGGGATTAGTTCTATAGTCATTGATCTCCTCTGCATGACATCTATTGGCCAGAAGGCTTCTGTTTTAAGAGTATTGTTTTATATACCTGTAACTTGTAAGTCACGATGATCATTCTTACATAGCTGTTCTAAGAGGTGGATCTGAACTCTAATTTATTTTCAATAACCAAATACTAAAATATTTTATCATTGCTTTCTTTTTTCAATCAGCTTGCAGTTTGTCAGAAAAACTTGTCTTCTGTGCATGAGATCTGGGCAGACTTTGTACATTATTACAGCCCAAGTTTTTTATCTTTGAGAAAGTTTATATGGTCTTGTACAAGGCTCGGGGACCTAAAATCTGCATATATGACATTGCAAAAGATGGTAGGTTTGGCCGTTGGAGCTGCTGGAGGAAAGTTACCCTCTTTAGGATTGGACATTCCTATACCTTCAAGAACGGAATTCTATAGTAACAATTTTATTTTTGAGGAAAACGGACATTCTACTGATGAGTTGTGCTATAAGAAAATGGTCCCTCACGATGGTGGCATAGGGAAATTTTCTGTTAATGATATTAAGTGTGAAGAAGTTGGAAGCGGTTCATTAACTCTTCAGAACAATTACAGAAGCAATTTTGTCACGAAGGTTTTGAGATGGTCTTTCAGTGATGTGATACACGCATGTGCACAGACTAGGGACTGCGGTCTTGCGGAGCAATTAATGCAACAGGTCTTATTTATTTTCATTGAGGTCATGCTTATTTAATGATATAGCCATTAACCAATGGGTAAAATAGATCGTGAATTTAGCTAATTTTTTTCCTTAAAAAAATTGAATTTATATCTTGATACCAAAACTTTTGTTCTGTAAATACGTATTTTTTCATTGAAAAAATGGTTCTTTCCAAGAGTTTCATTTTTTCAGTTTTATTCTTTTTGCTCGTTACTGCTGTCTTGGTGAAATAATATTTGTTATTTGATTACTTGTACCACATGTTCATATCTTTTACTTTATTTAGTTTAGCATTTCATGTGTACTGACGATACTAGGAACCATGTATTTAAAGATGCATGAACTTGGATTGCAACCTTCGAGCCACACTTTTGATGGTTTTGTTAGATCAGTTGTTTCAGAGAAAGGTTTCAGTGATGGGATGCAAATAGTAAGTTATTTTGGCTTTCATTATTCTTGGTTATGATTAAAAACTTTTCTTTTCTTTTTTCTTTTTCAAGAAAAAGTGTGTTATTTTTATTTTTATTATGAAACTAAAGATGTATTAATCCCCTCAACCCAAAAGCACTTTTTTTCTAGTTAAAAATAATGCAACAGAGGAAGTTGAAGCCATATGATTCAACGCTTGCTGCTGTTTCCATAAGTTGTAGCAAGGCATTAGAACTTGATTTGGCTGAGGCTCTACTCGAACAAATTTCTGCTTGTCCTAACCCATACCCCTTCAATGCATTTCTTTCGGCATGTGATATGATGGTAAGTTAACAATTTGAAGATGAAACTTCTTTCTGTAATTGCTTTTTATTTACTATATTCTCTTGAAGTTCTATGCAATTATATGATTTCTAATAAGCTGCAAACACAGAACTGTCACTCACGCTCCTTAAGTAGTTGGAAAGTAGTGTTAAGTGCCTGACAGAACTATTGCAAAAGGACCTAGATATTTTTTATTCAGACCCATAATTTGGAATGTTTTGGCATCTGTTAAAAAATAGTGTTACTTTTATTTTCTTCAGGATGGGGTATCATTGATATGGGACATTGGAGGGTTTAAATTATAATTGCAATTAAGTTTATGGCCTTTAAAGAATCCTCCTAATGAAAGCTTTTATGATGAAATATTAGTTTATGTAGCACTTGGTTGAATTATTTGAGTCCAACTCAGATTATGGGATTCTTAATGCAGGATCGTCCTGAACGGGCTTTGCGTATGTTGGTTAAAATGAAACAAATGAAGGTGCTTCCAGATGTCAAGACATACGAGCATTTATATTCGTTATTTGGCAACGTGAATGCTCCATATGAGCTTGGCGACAGATTGTCACAGGTGGATGTGGCTAAAAGGATCCGCATGATAGAGATGGATATGACAAAACATGGGATTCAACACAGTCATTTATCTATGAAGATCTTGGTAAGACGGTAACTATCTTCTCTCTCTCTCTCTCATCCATTAAAAAAAAATTGCACTGGTACAATGTATTGACTGGTGCTCTTGTCTGGTTATGGCCCATATCTAACTGGAGCACATTAAGGCCTCCAAAATTTCATGCGTATTTGACTCCCTTTTGTTTTTTCTTTGTTGTTTTCATTTACTAATATAAGGATAGAATCTACCACAAAATATTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAAAGAGCCCAGAGTACAAAGACAATAATTCAATAGATGATTCATCAAGACCTAACCTCTCCTATTTATAATAACTCTAAACCCTAGCTTTTTACTTGTTCCCCAAGTAAACCCCTAATTGAATAATAATCTCTAATAAGGCCCAAAAGCCCAATACAATTGAAATAACAATTAATTAATAATAAATACTAATACTAATATTCCTAAAACTCCAAGGTCCGGATCGTATCAATACTTTCCCCCCCAAGAGCCACCTTGTCCTCAAGGTGTTCCATCTCCGATGCCACCTTCTGCAGTTCCATCTTCTGGCAAAAAATCAGTCACCTCAACATCCTGGTAATCGTGCGCATCCCGAACGACCCACACATCCAAATTCTGAAGCTCTTTCTTCTTACAACGATGTCCTGGCCTCCCGGGACAAATTGTTCATCGCAGTGGAAACATAACCCTTTGTCCTTCCTTGCTCGAATTTCGGCTTCAGTGAGTTTTTTACAAGACATCGGGTGAACGGTTGTAGTTCTATGGGAAAAAATCTCTGTGCTTCCAGTTCCCGATACAATCGTTCCAGCTTTAGCCTTAACTGTTGCCGAAGTACTTCCCTCGTTTTGGGCAGCCTGAAAAGCAAAATCATCCTCAATCACTTGGGCCATAAACATTTTCTCTTCAATGTCCACTGGTCGTAGTTTACGCATCGCGCTCCGTATCTCCTCTTTCAGTCCACTTTCCCACTTCCCCTCCAATGCACTCATACTGATATCGCGCATTCTCTTAGCAAAAGCGCTCGAAGCTCCGGCGATATTCCTTCACCGTTCCTATTTGCGTCAAACTCATGAAGTTGGCATACTTATTGGCCTGGGCCACCGGTTGGAAACGCTCCAACAACCCATCTTTGAATTCGTTCCACGAACGAAAAAGAGCACGATCCTCCTCATACTGAAGCCACTCCAATGCCTCCCCTTCTAAACATAACCCTACTGCCTCAACTCCTTCATATTCAGTCAACTTGTTTACCAGGAAATATCGCTCGACCCGACTGAACCATCCCACCGGATCCTCGTCAGCAAGACCCTTGAAAACCAAAGATCTCAATTTCCCGAATCTCCTGTCACATCCCAGTCCCTCCCTTCCTCCTACTCTCTGGCTTCCTCGTTCAAATCTGTCTTCTCCTCCCCACCCGAAATCTCGTCCCCTATTTCGGACATTGTCACTCCCCCCTTTATCGTTCAAACCGTCATGCGCCAACGGCCTATCATAGCCCATGCGCAACCTCCTCTCCTCCAGAACCCTGTTTTCTCTCCCCACGACCCTTGGATCTCCCCTTTGGCCGAACTCCGGTCCCGGTAAATCGTCAACCCAATTTCGGCCTCGATCGTTCCAACCGTCTGGCGCGCTATTGGTCCGTCGTAACCAATGCGCACCCTCCTATCTTCTCGGAAAAGCTGCTTCCGCTTCCACAACTCCGCAGTGGGTCCTCTCTTCGATCGATGTCCGACCTCGGAAACCTTTCCCCGTCCCCAGGCCCTTGGAACCCATCTCTCTGGTCCAACCCGACGAACCCAGACCGACTCGAACCGATCGATCCGGCCCGACCCGGTCCCCCTTGACCGCCGCCGTGCCACCCGCTGCCTGGCCTCCCTTTCCACACGCCCGGCCCGCAGCCGCCACGCCCCCGCTCGCCTCCGACTCTGCCACGGCTCGGGCCTCGGCCCACGCCATCTCGCGCCACGTCCGACCCAGCCACACCACACTCTCGCCGCGCTCGCCCCCACGCCGCAGACGCCCCGCACTCGCGCCCGCCCGAGCTCCAGCACCCACAACCTCCGACGCCGCGCCGAACCCCGCCGGCCCCCAACCTCGCGTCCCCGCTCCCAAAGAACCTCGCGCAAGCGCTCGCGCCCGGCCTGCTGCGCGACCGCGCGCTGTTCGGCGTGAGCTCCAGCCCGTGCGCGCCGCCACGCTGTTTCCTGTCCGTCGCCCTCGCGTCGCGCGCGAACCCTCGCACCACCCTTCGCGAGGCCCAACTCCACCGCCGCCCAACCCCGATGACCCTTGTGTCGCCCCGTGCCGACCCCGCTAAAACCCACCCCTGCCCCTCCCGACTCGGTTGACAATCCCTTACCTTTGTCCGAACCGCTTGTCTCGGGATTTGGTTGTTCTGGTGTTTGCTCTAGCAACTTTTGTATATTGAGGTTAATCTGACCTATCTCCTGGTCCAGCCGACTATTCATTGCTGCCAGTTGAGCCTCGAATTCCTGTTGCTTCTTCAACATCTTGGCCCCACTCGATTCGCATTCCTGAACCCTCGCCTCCATCTTGGTGGTCACCATTCCCGGATCGGTAAATGACTCTGATACCAAAATGATAGAATCTACCACAAAATATTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAAAGAGCCCAGAGTACAAAAACGATAATTCAATAGATGATTCATCAAGACCTAACCTCTCCTATTTATAATAACTCTAAACCCTAGCCTTTTACTTGTTCCCCAAGTAAACCCCTAATTGAATAATAATCTCTAATAAGGCCCAAAAGCCCAATACAATTGAAATAACAATTAATTAATAATAAATACTAATACTAATATTCCTAAAACTCCAAGGTTCGGATCGTATCATATAACTTATTTTGTATCTACAGGAATGAAGCTAATACTTTAATTTAGAGAGATATTTGGTTTCTTCTGTAGTCTTCCATGCTATAGTTCTTGAATTACCATTGAGCGGAAGACCCAAGTAATTGCCCATTTTACAACCATGCCTTAGTGCTATAGCTAAAATCTCTTGATCCTCCAAGTTGATACCAAGACTTTCAGATTTCTGGTTGTTTATGTTCAGCTTGGCGATCAATTCAAATAAATATACTGAAGAACTCTTGGTTTCTTATTTTATTCTATAATCTCACACGTATAAATACATAATAAGGAAAATTAAGTGCAAGATTATCTCCTATAACTTCTCACCTACCTAACCACCTACAAATGAATTGAATAAATGTATTTACAAATTTACAAATTTAACCCTCACTTTCCAACACTCCCCCTCAAGCTGGATTGTATATATTATACAAACCTAGCTTGCTATTCAAGTCTTCGAAGTTGAGCCTTGGTAATGGTTTAGTGAGAATGTCTGCCACTTGTTGCTTGGTAGGAACATAAGTGAGTTGAACGACTTCGCTGTTAACCTTTTCAGAGATGAAGTGTCTGTCAATCTCAACGTGCTTCGTCCTGTCATGATGAACAGGATTTTTGGCGATGCTTATGGCAGCTTGATTATCACACTTCATTTGAATCGATGTTGGGTACTCTTGTCCTAACTCACTAAGGACCCTTTGTATCCAAATGCCTTCACATATTCCCTGAGATAGGGCTCGATATTCTGCCTCTGCACTACTTCTAGCAACCACTGGTTGTTTCTTACTCCTCCAAGTAACAAGGTTCCCCCAAACAAATGAACAATATCCAGAGGTTGATCTTCTATCTGTAGTATCCCCTGCCCAATCTGCATCTGAGTATATTTCAATATTCCTCTTCTCAGTTCTCTTGAATAGTAACCCCTTCCCAGGAGTCATCTTAAGATATCTGAGTATTCTATATACGGCTTCCATATGTTCGTCATTAGGACTATGCATAAATTGACTGACAACACTAACCGCAAATCCAATATCTGGTCGAGTATGAGAGAGATATATAAGACGTCCCACCAGCCTCTGGTATCTCCCCCTATCCACAGGACTGCTTTCATGATTGTATCCAAACTTTGTTTGAGGATCCATGGGAAATCTTCTTTGGTTTACACCCAAAGATGCAGTCTCTGCAAGAAGATCTAACACATACTTCCTTTGAGACATAATTATGCCTGTCTTGGATCGAGCAACCTCCATACCTAGGAAATATCTCGAGATTTCCGAGGTCTTTGACTTCGAACTCTTTAGCCAAAGCTTTCTTCAATTCCTGTAATTAAGGCTCATCATTTCCGGACAAAATAATATCATCCACATATACTATTAATAGGGCCAGAGATGTTTGGACTTCCTTTTGACAAACAAAGATGTGGTCCGACCGACATCGTGAATATCCAAGGCTAAGGATAAAGGTGGAAAATCTCCCAAACCATGCACGAGGTGATTGTTTTAGTCCATAAAGTGACTTTTTAAGTCGACATACCTTTGTCGGACTAGTATCTCTTTTTCGCACCGGAGGAACTTCCATATAAACTTCTTCTTCCAGATCCCCATTTAGAAATGCATTCTTTATATCTAGTTGCTGAAGACCCCACTCAAGATTAGCAGCAAGAGACAAGATAATCCTTATGGTGTTGAGCTTGGCAACTGGCGCAAATGTTTCTCGATAATCAATTCCATATGGTCGAGTAAATCCTCCGGCTACTAGTCTAGCTTTCAACCTTTCAATACTTCCATCAGCATTATGTTTAATTGTGAATATCCATTTGCAACCCACAGTTCGTTTCCCACTGGCCAATTCTGTCATTATCCACGTACCATTTTCCTCAAGTGCCCCAATTTCTTCTTGTACTGCTTTCTTCCAGCCAGGATGTTTCAATGCTTCTACGATACTAGTTGGAACTTGTATGTTGTCGAGTCTAGACACAAAGGCACGGTAAGAATCAGACAAGTTGTCATATGATACATGATTCCTAATGGGGTGCATGGTACACCTCCTAACCCCTTTCCGTATTGCAATTGGTAGGTTAAGATCATCAACCTCAGCATTTACTGCATTGTTAGGCTCGAATGTGGGTTGGTCACAATTTGAAACTGGTTTGGGATCAGACAAGACTTGGTCTGTTCGGATATCTGCCTGTTCAACTGGTTGTTTGTTTCTCCTTGTATAGGTACGGAGTTGACTATTGACAATTGGAGACGCTGGGGGTAAGGCAGGTTCAAGAATGATGGGACTAGATATGGTATTATCTGGGATATTGATGAGGCTAGGTATGGTATTATTTGGAATATCAAAGGCAGAGATATTAGAGTCATGTGATAAGGATGTAGGTTCAGTAGTTTCAAGAACCGATGACCATAACTGACTGGCATTCCCCGTCTCCCCCTGACAGTCAGGCTTGGAGTAATACGGAAGATGTTCACAGAAAGTGACATCCATGGTGACATAGACTCGTTTTGTCTCAGGAAAGTAACACTTGTACCCTTTTGAGTTGGCGAGTACCCCACAAATATGCATTTGTGGGCCCGAGGATCTAGCTTGTCACGATTATGGGAGTATATATGGACAAAGGCACTACACCCAAAAACTTTGGAGCAGTCACGAGACTAAGGCGAAGATGAGGAAAAGACTCGAGGAAAACCTGACGGGGAGTAGAAAACTGAAGAATGCGAGAAGGCATACGATTGATAAGGTAAGTAGCCGTGAGAATTGCATCACCCCAATGGAATTTAGGAACATGAGCCGAGAACATGAGACAACGGGTGATGTCAAGAAGGTGGCGATTTTTCCGTTCAGCAACCCCATTTTGTTGGGGAGTGTCAACACATGAGCTGATATGGATGATACCCTCTGTCGACAAGTAGTTTCCCAGGCTAGAACTAAAGAATTCTTTCACATTATCCGTTTTTAGGACACGAATATTGGTTTGGTATTGTATTTTGATCATGGTATGGAACTGTTTGAAGAGAGAACAAACTTCAGACTTTTCTCGCATAAGAAAGAGCCACGTAATACGTGTGTGATCATCAATAAATGACACGAACCAACGTGCTCCAGAGATATTTTTTATTTTAGAGGGGCCCCAAACATCACTGTGAATTAACGAGAATGGGCTAGAAGATTTATAACTTAGACTTGGATAGGGGGTACGAGTATGCTTTGCAATTTGACAAATCTCGCATGAAAAAGAATTAGGATTTTTATTATAGAACAAATTCGGAAATAATTTAGACAGATATGCAAAATTGGGATGACCTAGACGATAATGTAACAATAGGATTCCATTATCGTTATTGGAACTACTAGACACTTTATTGCTTGAATGGAAAGATAGAAATGAAGACTTGTCGCCAATTGTCAATAAATTTTGACTACGGTTGAGGTGGTAGAGACCGAACAGACTTCAAGATCGCCAATCATCCGCCCCGATTCCAAATCCTGAAAAACACATGAATTTGAATAGAATTTAGCTACACAGTTCAAATCTCTTGTCAATTTACTTATTGAAATGAGATTACAATCTAAATCAGGCACATGAAGAACAGATGTTAGAGATAAGTCAGGGGTGATACGGATGGAACCTGTCCCTGATATTTTTTAGTGCGACCCATCAACAATCTTGATGGAGGCATTGGATGTATCAGGCTGGTATTGTTGAAACAATGACTGCTTCTGTCATATGATCCGAGGCTCCGGTATCTATGATCCAGGGCTGAGTTTCTCTCTTATTAGCAGTTAGAGCGGTTGGTGCAATCTTCTGAGCAACTAGACCACTTTCCTGGATTGTGTTGCCTATGAGTTTTTGTAGTGCCTCAATCTGTTCCTTACTAAATGGAGAAGGTTCTGTACCGGCATTTTTCTCAGATACGACATTGGCCACATAAGCCCTACTGTCACGATCATTCCGGTTTCGAGGTTTCCAATCAACTGGCTTCCCATGGACCTTCCAACATGTCTCATTCACATGTCCTGGTTTTTTGCAATGGTCACACCAAGGCCGCCCTTGCAGGATCGATTGTCTCCAAGATTCCCTATTGAACTGACATTTCTAGACACAAATGCAGAGGCGTCGGAGCTTGGAGTTAATTCAGATTTGCCCATCATAATATGTTTCCTACTTTCCTCTCTTCGAACTTCCGAGAAGGCTTCACGAAGGGAAACCAAGGGTTTGACTCCCAGGATTCGTCCCCGAACTTCATCTAGATTACTGTTCAGACCAAAGAGAAACTTGAATGTTCGTTTCTGCTCCGTAATCTTTGTATATTGTTTTTTATCGTCAGGACACTTCCATGTATGAAGTTCGAATAGGTCTAATTGCTGCCAGTGACGTGAGAGGTTGTTATAGTACTCGGTAACCGACTGGTCTCCTTGACGGAGATCATGGAGAACAGACTCAATTCGGAATAGTTCCGAGGTGTTCTCTTTACTCGAGTAGGTCTCTTTTGCTGCTTCCCAAATGTGATATGCCGTGTCGTAGAGAAGAAAGTTTTCTCCAATTTCAGGAGTCATGGAATTAATTAACCACGACATTACCATGTTATTGTCTATCTTCCACTGTTTGAATCTTGGGTCCCCTATTTTCGGTTGATCCTCGTCCTTGGATAAATAATCATCTTTACCCTTTCCACAGATAAACATGTGTACCACTTGTGACCATTGAACATAGTTATGGCCATTTAATTTATGACAAGTAATATAAGTTGATGACAAATCATACCCTCCTAGTGTGTGATCTCCGATTTCGAGGACGTCATAATGCCAGTAAGACGATTATCAACAATTCGACCACAACAATTTCAATAACAATTCAAAATTCACCAATTCGTAATATCACAACAAATCGAAACAAGCAGGAGACAAACACCCGCAGTTGATCAATAATTTATGACACGATTACCTCAATGAAGCCGAGAGACCGAAGTCAATTGAGAGTGAGAATGAGAAACCCGAAATTTCGATGATGCGGTAGTGAGTGTGGCGACGTGCGGTGCTTAATCGATGCTGGGACACTGCGAAACCAACAGAAACCCGCCGAAGTTCCGATCAAGATGCCAAAATCGATTCAGCAAAATTGGAGAGAATTTCCAATCGATATTTGTTCAGATGAAAATCGATGGGAGGAATCGATTGAAAATTGGTTGGAAATCGCCTGAAGAAGTCGATCGACGCACAGAAGTGCCGGAGATTGAAGATCGGCTGGTGAACTTTACTGGCGAAATCGATCGGCGAAAGGGAAAAAAAAAACGATTTTGAGAAATCGATTGATTGAAACGGAGATTGAAGTCGATTGGGAAACAATCAATCGGCAAAATCGATTCGATTGGGAGGGAAAAGAAATTGATTTCAGATCTTTATCGCGCTCGATACCATGAAGAACTCTTGGTTTCTTATTTTATTCTATAATCTCACACGTATAAATACATAATAAGGAAAATTAAGTGCAAGATTATCTCCTATAACTTCTCACCTACCTAACCACCTACAAATGAATTGAATAAATGTATTTACAAATTTACAAATTTAACCCTCACTTTCCAACATATACCATATTAAACCATCTTCAAATGGAAGGTGGTGAATGTTTATAGTGCCGGTCCCATAGTGAAGCCTTTTACAACCTTCTTTGTTTGCAGCATTTATCATGACCCTACTGAAGCTATCTACCTCCAAGAGAAAGAGGAAAGGGGATAGTGGATCTCCTTGTTGTAGTCCTGAGTGACTTTAGTCTCACCTCTTGAGCAACCATAGATAATGGAGTAGTTTGGTGAAGAGATACAATCCCATATTTACGGAAATTAGGATGGAATGGATAAATCAAATTTAACTCAAGTTGCTGTGTTTTTCCAGAACATATATTGTCTACATGCACTTAATTTACTAGATCAAATTGTTGTAGGTGTACCATTGATGTCATCGTTGTATGTAGTCCTGATTATGTGCAAACTAGCACATAAAAATGGCACAAGTGAAACATAGTGTATGGCTGAAAAAATGTGGTAGTTAACAGCCTTGGCATAGTGGGCGCACGATTAAATTGTTTTCTTACTCGTTACTATAGTTATAAAATCTTTCTACTTGAACCAATATTAGCTAGTTGAATAATTAAGTTCCCTCACTGTTTATGACATCAATGTTGCTTCTGTATTTTCTTTTATACCAGTTGAAAGCTCTAGGTGCAGAGGGGATGACGATGGAGCTCCTTCAGTATTTAAATTTGGCAGAGAACCTTTTCTTTTACTATAACACTCATCTGGGAACGCCAATTTACAACACAGTGTTGTCTTCTTTAGTGAAATCCAAGGAAGTAAGTGCTTGTGGTCGTACACTTTGCTATCGATGAGTTCCTCATTTGTGTTAAACAGATTCTTCTTTCCATACTGTGCAGATTCACATGGCTGTAGAATTATTCAATAATATGAAGCATTCTGGTTCCTTTCCAGATGCTGTGACATTTGAGTGGATGATCGACTGTTGTAGTGTTATGGGATGCTTGAAATCAGCTCTGGCCCTTCTTTCCATGATGGTCCGCTCAGGATTTTGTCCACAGTTATTAACTTATACTAGTCTAGTAAAGGTATGAATTTATGATTCTTATGGCCACACATTTACTCACTGCAAGTATACTTCTAAAGCATTCGTCATGAGTTGGTAGATTAAGGCTTTTGAAGTTACACTTTGTGGACTATTAGCTTCTTAGATTTTTTTTTTTTGATATCCGTGACTGATTGGGCCAGCTTGCGCGCACCTCGACTAATGTTGCCGAGTTTGTCAACTTTAATGTTACCGTCCCAGGAGTGATCTTGTTGGTAGAGGCTTGGGGTCTCCTTGGAGACTCAAACTCGAAACTCACGAGTGAACTTAATTGTAAAACTCCTTGTTATTTTCTTGGTTTTGGGTTTGGGATGGGCGCAGGTGCCCTCAAGTAGTAGAGGGGCAAACTCTGATTCCAGTTATAAAATAAAAGTCTTGAATTGAAGGAGTAGGGTCTCTAGCTTGGCCCTGGGAGAGAATTTCTTTCAACAATACTTCAGTTTGGCCAATTCAATGTCATTGTACAGTTCAAAAACTGTGAATTTTTTTTCTTGTGCAACATAATTTATTTTCTATTCACCTATGGTCTCTGACACAAATGAACCATCCTAAAGCTTTTCGATTGAGGTCGAGGAGGGCGCACAAATAACTTTCCATAAGTTTCCATGTCTACCATCACCAATAATTTCTCTATTTCATATTATTATTCATTTTTTTATTGTTGTTATTATTCAAAATCTATTGCTTGGATTATCTTGATTCAGATTGTGCTGGGGTATGGGAGATTTGATGATGCCTTGAATCTTTTGGATCAAGCCAGTTCAGAAGGGATTGAACTGGATGTAGTTATAATGAATATCATCCTAGAGAAAGCTTGTGAAAAGGTACCCTTCACGACCTCATGTCACACTTGTTAGCAATTTTTAAGAAATATTGTCAAACAGCACGTAGGTGTTTATAGCCAAATACTTGAAGCGCTCGATGCACTCGAGCATATTTCCCAGGTTCCATGAAGTGCATGTTTGAAAGTGATTTGAAATGGTCAAAAATCACTTTAACATTATCGACATTTTTCTAGTAACTTGTCAAAATCGAGCATGTATTCTAACTTTAGCTCATCTCTCTTTCCGGGTTCTTTTTTGAAACTGATATTAGGGAAGGATTGATGTGATTGAGTTTGTCGTTGAGAGGATGAGTCGCGAAAAGATCCAACCTGACCCTTCAGTATGCCATAGTGTCTTCTCCGCATATGTGGACCTCGGCTATCACAGCACTGCCATGGAAGCACTGCAAGTACTGAGCATGCGTATGTTATGCAAAGAAGACGGCACCTCTCCAGATTTGACCGATTATGTCGAAAAATTTGTTCTTTCCGAGGACTCCGAAGTCGATTCACGCATTTTGGAACTCTTCGAATGCTCTGAAGAGAACCTATGTTTTGCACTCTTCAACTTGAGATGGTCTGCCATGCTGGGATATTCACTTTGTTCCTCCCCTAGTCAGAGTCCATGGACCATGCGACTTGCAAATTCCTATGATGACTACAGAAACTCATAGATCAGTAAAAATTTATTTGTTCTACTCTACCTAAGTTAAATGCCCGAGTTTTTTCAACGAATTGGGCAAGTTCATTTTTTTAGATGTAGGGTGCTAATTTCACAAGCAATCAAAACAAGAGTTTTTGTGTTAAAATTGTTGTCCTACTACCCATAGGGTAGTGTGTCAAATATGAATAAATACAATGGTTTTAGTTTGGTCTCATTGTAATATTAGTTCAATTGTTTGTTATATCAAGGGTTAGGGAGAAATTTTTGCGAAGTGCTCGTGCTCGAGCAACTCAGCTGTGCAGTGGCTTGCTCGAGCAACATTCTTCTGTACAAATCGGCTACAATCTTCGTTCATG

mRNA sequence

GCAGAACAAAGATTCAATGGCCAAGTGATAGGAGAGGCAACTTCTGAAAGTTGAAGATTGATTCCTTTAAGAGGAGAAACCCTACTTTTAGACGAACAGAATTCGGCTGAAGATCAAGAATCAAGTTCATGGATTTCTTCAAATTGCATTCAGAATTTGGTGTTTACTGAGCTCTCGTCGCCGTTCTTGCGGGGAAGACCATGCATAGGGCGAGGTCTCGTTTTGGATCAATAGCTGATTCGCTATACAGATTCAAGCCGGACGAACATGGGCGAAGGCAGGAGGCTAGCAGATTGGTATTCCATCGGGCTTTTCTCATATCCAAAGGTAGTCAATTTTTGGTAAATGGAGCAGAGTCAACTAAGTTCATGCAGATGCGGATAGTTAATGCACTTTGCCTGGGTGATAGAAGTGGTGCTTCCAACATGCTTATAGAACTTGGCCAGGAAAAACTCTCTTTAACTGCAGATAATTTTGTTCGCATTTTGAGCTACTGTGCGAAATCACCTGATCCATTGTTTAGCATGGAAACTTGGAAAATAATGGAGGAAAGAGGAATCTTCCTAAATCATACATGCTCCTTACTCATGATAGAAGCACTCTGTAAAGGGGGTTACTTAGATGAGGCGTTTGGTTTAATAAATTTCCTAGCAGAAAGTCATGCCATGTTTCCTGTTCTTCCTGTGTACAATTGTTTTTTGAGAGCCTGTGCCAAAAGGCAAAGTATGGTTCATGTTAGTCGGTGCTTGGATCTGATGGATCACAAAATGGTTGGAAAGAATGAATCTACATACTCCGAGCTACTTAAGCTTGCAGTTTGTCAGAAAAACTTGTCTTCTGTGCATGAGATCTGGGCAGACTTTGTACATTATTACAGCCCAAGTTTTTTATCTTTGAGAAAGTTTATATGGTCTTGTACAAGGCTCGGGGACCTAAAATCTGCATATATGACATTGCAAAAGATGGTAGGTTTGGCCGTTGGAGCTGCTGGAGGAAAGTTACCCTCTTTAGGATTGGACATTCCTATACCTTCAAGAACGGAATTCTATAGTAACAATTTTATTTTTGAGGAAAACGGACATTCTACTGATGAGTTGTGCTATAAGAAAATGGTCCCTCACGATGGTGGCATAGGGAAATTTTCTGTTAATGATATTAAGTGTGAAGAAGTTGGAAGCGGTTCATTAACTCTTCAGAACAATTACAGAAGCAATTTTGTCACGAAGGTTTTGAGATGGTCTTTCAGTGATGTGATACACGCATGTGCACAGACTAGGGACTGCGGTCTTGCGGAGCAATTAATGCAACAGATGCATGAACTTGGATTGCAACCTTCGAGCCACACTTTTGATGGTTTTGTTAGATCAGTTGTTTCAGAGAAAGGTTTCAGTGATGGGATGCAAATATTAAAAATAATGCAACAGAGGAAGTTGAAGCCATATGATTCAACGCTTGCTGCTGTTTCCATAAGTTGTAGCAAGGCATTAGAACTTGATTTGGCTGAGGCTCTACTCGAACAAATTTCTGCTTGTCCTAACCCATACCCCTTCAATGCATTTCTTTCGGCATGTGATATGATGGATCGTCCTGAACGGGCTTTGCGTATGTTGGTTAAAATGAAACAAATGAAGGTGCTTCCAGATGTCAAGACATACGAGCATTTATATTCGTTATTTGGCAACGTGAATGCTCCATATGAGCTTGGCGACAGATTGTCACAGGTGGATGTGGCTAAAAGGATCCGCATGATAGAGATGGATATGACAAAACATGGGATTCAACACAGTCATTTATCTATGAAGATCTTGTTGAAAGCTCTAGGTGCAGAGGGGATGACGATGGAGCTCCTTCAGTATTTAAATTTGGCAGAGAACCTTTTCTTTTACTATAACACTCATCTGGGAACGCCAATTTACAACACAGTGTTGTCTTCTTTAGTGAAATCCAAGGAAATTCACATGGCTGTAGAATTATTCAATAATATGAAGCATTCTGGTTCCTTTCCAGATGCTGTGACATTTGAGTGGATGATCGACTGTTGTAGTGTTATGGGATGCTTGAAATCAGCTCTGGCCCTTCTTTCCATGATGGTCCGCTCAGGATTTTGTCCACAGTTATTAACTTATACTAGTCTAGTAAAGATTGTGCTGGGGTATGGGAGATTTGATGATGCCTTGAATCTTTTGGATCAAGCCAGTTCAGAAGGGATTGAACTGGATGTAGTTATAATGAATATCATCCTAGAGAAAGCTTGTGAAAAGGGAAGGATTGATGTGATTGAGTTTGTCGTTGAGAGGATGAGTCGCGAAAAGATCCAACCTGACCCTTCAGTATGCCATAGTGTCTTCTCCGCATATGTGGACCTCGGCTATCACAGCACTGCCATGGAAGCACTGCAAGTACTGAGCATGCGTATGTTATGCAAAGAAGACGGCACCTCTCCAGATTTGACCGATTATGTCGAAAAATTTGTTCTTTCCGAGGACTCCGAAGTCGATTCACGCATTTTGGAACTCTTCGAATGCTCTGAAGAGAACCTATGTTTTGCACTCTTCAACTTGAGATGGTCTGCCATGCTGGGATATTCACTTTGTTCCTCCCCTAGTCAGAGTCCATGGACCATGCGACTTGCAAATTCCTATGATGACTACAGAAACTCATAGATCAGTAAAAATTTATTTGTTCTACTCTACCTAAGTTAAATGCCCGAGTTTTTTCAACGAATTGGGCAAGTTCATTTTTTTAGATGTAGGGTGCTAATTTCACAAGCAATCAAAACAAGAGTTTTTGTGTTAAAATTGTTGTCCTACTACCCATAGGGTAGTGTGTCAAATATGAATAAATACAATGGTTTTAGTTTGGTCTCATTGTAATATTAGTTCAATTGTTTGTTATATCAAGGGTTAGGGAGAAATTTTTGCGAAGTGCTCGTGCTCGAGCAACTCAGCTGTGCAGTGGCTTGCTCGAGCAACATTCTTCTGTACAAATCGGCTACAATCTTCGTTCATG

Coding sequence (CDS)

ATGCATAGGGCGAGGTCTCGTTTTGGATCAATAGCTGATTCGCTATACAGATTCAAGCCGGACGAACATGGGCGAAGGCAGGAGGCTAGCAGATTGGTATTCCATCGGGCTTTTCTCATATCCAAAGGTAGTCAATTTTTGGTAAATGGAGCAGAGTCAACTAAGTTCATGCAGATGCGGATAGTTAATGCACTTTGCCTGGGTGATAGAAGTGGTGCTTCCAACATGCTTATAGAACTTGGCCAGGAAAAACTCTCTTTAACTGCAGATAATTTTGTTCGCATTTTGAGCTACTGTGCGAAATCACCTGATCCATTGTTTAGCATGGAAACTTGGAAAATAATGGAGGAAAGAGGAATCTTCCTAAATCATACATGCTCCTTACTCATGATAGAAGCACTCTGTAAAGGGGGTTACTTAGATGAGGCGTTTGGTTTAATAAATTTCCTAGCAGAAAGTCATGCCATGTTTCCTGTTCTTCCTGTGTACAATTGTTTTTTGAGAGCCTGTGCCAAAAGGCAAAGTATGGTTCATGTTAGTCGGTGCTTGGATCTGATGGATCACAAAATGGTTGGAAAGAATGAATCTACATACTCCGAGCTACTTAAGCTTGCAGTTTGTCAGAAAAACTTGTCTTCTGTGCATGAGATCTGGGCAGACTTTGTACATTATTACAGCCCAAGTTTTTTATCTTTGAGAAAGTTTATATGGTCTTGTACAAGGCTCGGGGACCTAAAATCTGCATATATGACATTGCAAAAGATGGTAGGTTTGGCCGTTGGAGCTGCTGGAGGAAAGTTACCCTCTTTAGGATTGGACATTCCTATACCTTCAAGAACGGAATTCTATAGTAACAATTTTATTTTTGAGGAAAACGGACATTCTACTGATGAGTTGTGCTATAAGAAAATGGTCCCTCACGATGGTGGCATAGGGAAATTTTCTGTTAATGATATTAAGTGTGAAGAAGTTGGAAGCGGTTCATTAACTCTTCAGAACAATTACAGAAGCAATTTTGTCACGAAGGTTTTGAGATGGTCTTTCAGTGATGTGATACACGCATGTGCACAGACTAGGGACTGCGGTCTTGCGGAGCAATTAATGCAACAGATGCATGAACTTGGATTGCAACCTTCGAGCCACACTTTTGATGGTTTTGTTAGATCAGTTGTTTCAGAGAAAGGTTTCAGTGATGGGATGCAAATATTAAAAATAATGCAACAGAGGAAGTTGAAGCCATATGATTCAACGCTTGCTGCTGTTTCCATAAGTTGTAGCAAGGCATTAGAACTTGATTTGGCTGAGGCTCTACTCGAACAAATTTCTGCTTGTCCTAACCCATACCCCTTCAATGCATTTCTTTCGGCATGTGATATGATGGATCGTCCTGAACGGGCTTTGCGTATGTTGGTTAAAATGAAACAAATGAAGGTGCTTCCAGATGTCAAGACATACGAGCATTTATATTCGTTATTTGGCAACGTGAATGCTCCATATGAGCTTGGCGACAGATTGTCACAGGTGGATGTGGCTAAAAGGATCCGCATGATAGAGATGGATATGACAAAACATGGGATTCAACACAGTCATTTATCTATGAAGATCTTGTTGAAAGCTCTAGGTGCAGAGGGGATGACGATGGAGCTCCTTCAGTATTTAAATTTGGCAGAGAACCTTTTCTTTTACTATAACACTCATCTGGGAACGCCAATTTACAACACAGTGTTGTCTTCTTTAGTGAAATCCAAGGAAATTCACATGGCTGTAGAATTATTCAATAATATGAAGCATTCTGGTTCCTTTCCAGATGCTGTGACATTTGAGTGGATGATCGACTGTTGTAGTGTTATGGGATGCTTGAAATCAGCTCTGGCCCTTCTTTCCATGATGGTCCGCTCAGGATTTTGTCCACAGTTATTAACTTATACTAGTCTAGTAAAGATTGTGCTGGGGTATGGGAGATTTGATGATGCCTTGAATCTTTTGGATCAAGCCAGTTCAGAAGGGATTGAACTGGATGTAGTTATAATGAATATCATCCTAGAGAAAGCTTGTGAAAAGGGAAGGATTGATGTGATTGAGTTTGTCGTTGAGAGGATGAGTCGCGAAAAGATCCAACCTGACCCTTCAGTATGCCATAGTGTCTTCTCCGCATATGTGGACCTCGGCTATCACAGCACTGCCATGGAAGCACTGCAAGTACTGAGCATGCGTATGTTATGCAAAGAAGACGGCACCTCTCCAGATTTGACCGATTATGTCGAAAAATTTGTTCTTTCCGAGGACTCCGAAGTCGATTCACGCATTTTGGAACTCTTCGAATGCTCTGAAGAGAACCTATGTTTTGCACTCTTCAACTTGAGATGGTCTGCCATGCTGGGATATTCACTTTGTTCCTCCCCTAGTCAGAGTCCATGGACCATGCGACTTGCAAATTCCTATGATGACTACAGAAACTCATAG

Protein sequence

MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMRIVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGIFLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVSRCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCTRLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELCYKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRDCGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAAVSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLPDVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYVDLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENLCFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDDYRNS

Homology

[Close]

BLAST of Sed0015348 vs. NCBI nr
Match: XP_023536089.1 (pentatricopeptide repeat-containing protein At1g76280 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1325.1 bits (3428), Expect = 0.0e+00
Identity = 668/816 (81.86%), Postives = 731/816 (89.58%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRAR R GSIADSLYRF+P EHGR+Q+A+++VF RA LIS+G ++L N AESTKFMQ +
Sbjct: 1   MHRARFRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL +GDRS ASN+L+ELGQEK SLTADNFV ILSYCA+SPDPLF METWKIMEERG+
Sbjct: 61  IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FL++TC+LLMI+ALCKGGYLDEAFGLI+FLAES  MFPVLPVYN FLRAC KRQS VHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLD+MD +MVGKNE+TYSELLK+AVCQKNLSSVHEIW DFV  YSPS LSLRKFIWS T
Sbjct: 181 QCLDMMDRRMVGKNEATYSELLKVAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDLKSAY  LQKMV L +GAAG KLPSL LDIP+P RTE Y  NF FEENG STDEL 
Sbjct: 241 RLGDLKSAYTALQKMVALVIGAAGQKLPSLELDIPVPLRTESYHENFNFEENGPSTDELY 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KKMVP +G IG+FSVN +KC EV SG LTL +NYRSNFV KVLRWSF+DVI ACA TR+
Sbjct: 301 CKKMVPCEGDIGQFSVNGMKCGEVESGRLTLPSNYRSNFVMKVLRWSFNDVICACALTRN 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSE+GFSDG++ILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VSISCSKALELDLAEALLEQISAC  P+PFNAFLSACDMMD+PERA+RMLVKMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVFPHPFNAFLSACDMMDQPERAMRMLVKMKQMEVLP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           DVKTYE LYSLFGNVNAPYE G+RLSQVD AKRIRMIEMDM KHGIQHSH SM  LLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGMT ELLQYLN+AENLF+Y NT LGTPIYNT L  LV+SKEIHMA+ELFNNMKHSG 
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYDNTCLGTPIYNTALHFLVESKEIHMAIELFNNMKHSGL 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDA TFE MI+CCSV+GCLKSA ALLS+M+RSGFCPQ+LTYTSLVKIVLG+ RFDDALN
Sbjct: 601 FPDAATFEMMINCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGIELDVVIMN I++KACEK   DVIEFVVE+M REKIQPDPS CHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKVTXDVIEFVVEKMKREKIQPDPSTCHSVFSAYV 720

Query: 721 DLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENL 780
            LGYHSTAMEALQVLSMRMLCKE  TSP +T+YVE FVL+EDSE +SRILE F+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEHDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780

Query: 781 CFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDD 817
            FAL NLRWSAMLGYSLCSSP+QSPW MRLA+SYDD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSPNQSPWAMRLASSYDD 816

[Close]

BLAST of Sed0015348 vs. NCBI nr
Match: XP_022132690.1 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Momordica charantia])

HSP 1 Score: 1324.7 bits (3427), Expect = 0.0e+00
Identity = 671/820 (81.83%), Postives = 729/820 (88.90%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRA SR GSIADSLYRFKP EHGR+Q +S+L FHR  LISK S+FL NGAE+TKFMQM+
Sbjct: 1   MHRATSRLGSIADSLYRFKPHEHGRQQASSKLAFHRTLLISKDSEFLGNGAETTKFMQMQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL LGDRS ASN+L+ELGQEK SLTADNFVRILSYCA SPDPLF METW+IME+RGI
Sbjct: 61  IVDALRLGDRSSASNLLMELGQEKHSLTADNFVRILSYCAGSPDPLFVMETWRIMEDRGI 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FLN+TCSLLMIEALCKGGYLDEAFGLINFLAES  MFPVLPVYNCFLRAC K QS VHV 
Sbjct: 121 FLNNTCSLLMIEALCKGGYLDEAFGLINFLAESRVMFPVLPVYNCFLRACVKMQSTVHVG 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLDLMDH+MVGKNE+TYSELLKLAV Q+NLSSVHEIW DFV  YSPS LSLRKFIWS  
Sbjct: 181 QCLDLMDHRMVGKNEATYSELLKLAVFQQNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYA 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDLKSA ++LQKMV LAVGAAGGKLPSL LDIPIPS TEFY NNF FE+N HS+DEL 
Sbjct: 241 RLGDLKSACISLQKMVALAVGAAGGKLPSLELDIPIPSSTEFYRNNFSFEDNEHSSDELY 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KK+V  D  IG+FSVN +KC +  SG LT QNN RS+FV KVLRWSF+DVIHACA TRD
Sbjct: 301 RKKLVTCDDDIGQFSVNGMKCGD-ESGPLTFQNNCRSSFVMKVLRWSFNDVIHACAFTRD 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQM +LGLQPS HTFDGFVRSVVSE+GFSDGM+ILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMLDLGLQPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VSISCSKALELDLAEALLEQISACP P+PFNAFL ACD MD+PERA+RMLVKMKQ+KVLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACPYPHPFNAFLKACDTMDQPERAMRMLVKMKQLKVLP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           +V TYEHLYSLFGNVNAPYE G+RLSQ D  KRIRMIEMDM KHGIQHS+LSM  LLKAL
Sbjct: 481 NVNTYEHLYSLFGNVNAPYEEGNRLSQADAGKRIRMIEMDMAKHGIQHSNLSMTNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGMT ELLQYL++AENLF+Y NT+LGTP+YNTVL  LV+SKEIHMA+ELFNNMKHSG 
Sbjct: 541 GAEGMTKELLQYLSVAENLFYYNNTYLGTPVYNTVLHFLVESKEIHMAIELFNNMKHSGF 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDA TFE M+DCCSVM CLKSA ALLSMMVR+GFCPQ+LTYTSLVKIVL    FDDALN
Sbjct: 601 FPDAATFEMMVDCCSVMECLKSAFALLSMMVRTGFCPQILTYTSLVKIVLRSEGFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGI+LDVVIMN IL KACEKGR+DVIEFV+ERM+REKIQPDPS CHSVFSAYV
Sbjct: 661 LLDQASSEGIQLDVVIMNTILLKACEKGRVDVIEFVIERMNREKIQPDPSTCHSVFSAYV 720

Query: 721 DLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENL 780
           +LGYHSTAMEALQVLSMRML KE+  SPDLT+YVE FVL+ED   D RILE F+CSEE+L
Sbjct: 721 NLGYHSTAMEALQVLSMRMLSKEEDASPDLTEYVENFVLAEDPGADLRILEFFKCSEESL 780

Query: 781 CFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDDYRNS 821
            FALFNLRWSAMLGYSLCSSP+QSPW MRLANSYD  R+S
Sbjct: 781 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLANSYDANRSS 819

[Close]

BLAST of Sed0015348 vs. NCBI nr
Match: XP_022937086.1 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1322.4 bits (3421), Expect = 0.0e+00
Identity = 666/816 (81.62%), Postives = 732/816 (89.71%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRAR R GSIADSLYRF+P EHGR+Q+A+++VF RA LIS+G ++L N AESTKFMQ +
Sbjct: 1   MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL +GDRS ASN+L+ELGQEK SLTADNFV ILSYCA+SPDPLF METWKIMEERG+
Sbjct: 61  IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FL++TC+LLMI+ALCKGGYLDEAFGLI+FLAES  MFPVLPVYN FLRAC KRQS VHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLD+MD +MVGKNE+TYSELLK+AVCQKNLSSVHEIW DFV  YSPS LSLRKFIW  T
Sbjct: 181 QCLDIMDRRMVGKNEATYSELLKVAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWCYT 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDLKSA+  LQKMV L +GAAG KLPSL LDIP+P RTEFY +NF FEENG STDE+ 
Sbjct: 241 RLGDLKSAHTALQKMVALVIGAAGQKLPSLELDIPVPLRTEFYHDNFNFEENGPSTDEVY 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KKMVP +G I +FSVN +KC EV SG  TL +NYRSNFV KVLRWSF+DVI ACA TR+
Sbjct: 301 CKKMVPCEGDIEQFSVNGMKCGEVESGR-TLPSNYRSNFVMKVLRWSFNDVICACALTRN 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSE+GFSDG++ILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VSISCSKALELDLAEALLEQISAC  P+PFNAFLSACDMMD+PERA+RML KMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVYPHPFNAFLSACDMMDQPERAMRMLAKMKQMEVLP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           DVKTYE LYSLFGNVNAPYE G+RLSQVD AKRIRMIEMDM KHGIQHSH SM  LLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGMT ELLQYLN+AENLF+Y NT LGTPIYNT L  LV+SKEIHMA+ELFNNMKHSG 
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNNTWLGTPIYNTALHFLVESKEIHMAIELFNNMKHSGL 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDA TFE MIDCCSV+GCLKSA ALLS+M+RSGFCPQ+LTYTSLVKIVLG+ RFDDALN
Sbjct: 601 FPDAATFEMMIDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGIELDVVIMN I++KACEKGRIDVIEFVVE+M R+KIQPDPS CHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKGRIDVIEFVVEKMKRKKIQPDPSTCHSVFSAYV 720

Query: 721 DLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENL 780
            LGYHSTAMEALQVLSMRMLCKE  TSP +T+YVE FVL+EDSE +SRILE F+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEQDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780

Query: 781 CFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDD 817
            FAL NLRWSAMLGYSLCSSP+QSPW MRLA+SYDD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSPNQSPWAMRLASSYDD 815

[Close]

BLAST of Sed0015348 vs. NCBI nr
Match: XP_022976056.1 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1321.2 bits (3418), Expect = 0.0e+00
Identity = 667/816 (81.74%), Postives = 731/816 (89.58%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRAR R GSIADSLYRF+P EHGR+Q+A+++VF RA LIS+G ++L N AESTKFMQ +
Sbjct: 1   MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL +GDRS ASN+L+ELGQEK SLTADNFV ILSYCA+SPDPLF METWKIMEERG+
Sbjct: 61  IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FL++TC+LLMI+ALCKGGYLDEAFGLI+FLAES  MFPVLPVYN FLRAC KRQS VHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLD+MD +MVGKNE+TYSELLK+AV QKNLSSVHEIW DFV  YSPS LSLRKFIWS T
Sbjct: 181 QCLDMMDRRMVGKNEATYSELLKVAVGQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDLKSAY  LQKMV L +GAAG KL SL LDIP+P RTEFY +NF FEENG STDEL 
Sbjct: 241 RLGDLKSAYTALQKMVTLVIGAAGQKLSSLELDIPVPLRTEFYHDNFNFEENGPSTDELY 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KK+VP +G I +FSVN +KC EV SG LTL +NYRSNFV KVLRWSF+DVI ACA+TR+
Sbjct: 301 CKKVVPCEGDIWQFSVNGMKCGEVESGRLTLPSNYRSNFVMKVLRWSFNDVICACARTRN 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSE+GFSDG++ILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VSISCSKALELDLAEALLEQISAC  P+PFNAFLSACDMMD+PERA+RML KMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVYPHPFNAFLSACDMMDQPERAMRMLAKMKQMEVLP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           DVKTYE LYSLFGNVNAPYE G+RLSQVD AKRIRMIEMDM KHGIQHSH SM  LLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGMT ELLQYLN+AENLF+Y NT LGTPIYNT L  LV+SKEIHMA ELFNNMKHSG 
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNNTCLGTPIYNTALHFLVESKEIHMATELFNNMKHSGL 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDA TFE MIDCCSV+GCLKSA ALLS+M+RSGFCPQ+LTYTSLVKIVLG+ RFDDALN
Sbjct: 601 FPDAATFEMMIDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGIELDVVIMN I++KACEKGRIDVIEFVVE+M REKIQPDPS CHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKGRIDVIEFVVEKMKREKIQPDPSTCHSVFSAYV 720

Query: 721 DLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENL 780
            LGYHSTAMEALQVLSMRMLCKE  TSP +T+YVE FVL+EDSE +SRILE F+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEHDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780

Query: 781 CFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDD 817
            FAL NLRWSAMLGYSLCSS +QSPW MRLA+SYDD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSTNQSPWAMRLASSYDD 816

[Close]

BLAST of Sed0015348 vs. NCBI nr
Match: XP_038897387.1 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Benincasa hispida])

HSP 1 Score: 1308.1 bits (3384), Expect = 0.0e+00
Identity = 656/820 (80.00%), Postives = 729/820 (88.90%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRA SR GSIADS+YRF+P EH R+Q+A +LVFHRAFLIS GS+ L NGA+ST FMQM+
Sbjct: 1   MHRASSRLGSIADSIYRFRPHEHVRKQDAGKLVFHRAFLISNGSEILGNGADSTTFMQMQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL LGD + ASN+L++LGQEK SLTAD+FV ILSYCA+SPDPLF METWKIMEERGI
Sbjct: 61  IVDALRLGDINSASNLLMDLGQEKHSLTADSFVPILSYCARSPDPLFVMETWKIMEERGI 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FLN+TCSLL+IEALCKGGYLDEAFGLINFLAESH MFPVLPVYNCFLRAC KRQSMVHVS
Sbjct: 121 FLNNTCSLLIIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACVKRQSMVHVS 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLDLMDH+MVGKNE+TYS+LL+LAVCQKNLSSVHEIW + V  YSPS LSLRKFIWSCT
Sbjct: 181 QCLDLMDHRMVGKNEATYSKLLELAVCQKNLSSVHEIWTELVKNYSPSVLSLRKFIWSCT 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDLKSAY  LQKMV LA GA GGK PSL LDIPIPSRTE Y NNF FEENG STDEL 
Sbjct: 241 RLGDLKSAYTALQKMVALATGATGGKSPSLKLDIPIPSRTELYCNNFTFEENGPSTDELF 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KK+VP  G +GK SVN +KC EV SG L L NN+RS+FV KVLRWSF+DVIHACA+TR+
Sbjct: 301 CKKLVPCSGVVGKISVNGMKCGEVESGPLALPNNHRSSFVMKVLRWSFNDVIHACARTRN 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQMHELG+QPS HTFDGFVRSVVSE+GFSDGM+ILKIMQQR+L+PYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGVQPSRHTFDGFVRSVVSERGFSDGMKILKIMQQRELEPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VSISCSKALELDLAEALLE+IS C  P+PFNAFLSACD MD+PERA+RM  KM+QM+VLP
Sbjct: 421 VSISCSKALELDLAEALLERISTCLYPHPFNAFLSACDTMDQPERAMRMFAKMRQMEVLP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           D+KTY  LYSLFGNVNAPYE   RLSQVD AKRIRMIE+DM KHGIQHS +SM  LLKAL
Sbjct: 481 DIKTYGLLYSLFGNVNAPYEEASRLSQVDAAKRIRMIEIDMEKHGIQHSLVSMMNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGMT ELLQYLN+AENLF+Y +T LGTP+YNTVL  LV+SKEIHMA+E+FNNMKHSG 
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNHTCLGTPVYNTVLHFLVESKEIHMAIEVFNNMKHSGF 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDAVTFE MIDCCSVMGCLKSA  LLSMM+RSGFCPQ+LTYTSL+KIVL + RFDDALN
Sbjct: 601 FPDAVTFEIMIDCCSVMGCLKSAFVLLSMMIRSGFCPQILTYTSLIKIVLEFERFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGIELDV+IMN IL+KA EK R+DVIEFVVE+M+R++IQP+PS CH VFS YV
Sbjct: 661 LLDQASSEGIELDVLIMNKILQKAREKVRVDVIEFVVEKMNRKRIQPNPSTCHDVFSTYV 720

Query: 721 DLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENL 780
           +LGYHSTAMEALQVLSMRMLCKED TS  +T+Y+E FVL+ED+  DSRILE F+CSEE+L
Sbjct: 721 NLGYHSTAMEALQVLSMRMLCKEDDTS--VTEYIENFVLAEDAGADSRILEFFKCSEESL 780

Query: 781 CFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDDYRNS 821
            FALFNLRWSAMLGYSLCSSPSQSPW MRLA+SYD YR S
Sbjct: 781 SFALFNLRWSAMLGYSLCSSPSQSPWAMRLASSYDGYRIS 818

[Close]

BLAST of Sed0015348 vs. ExPASy Swiss-Prot
Match: Q9SGQ6 (Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana OX=3702 GN=At1g76280 PE=2 SV=2)

HSP 1 Score: 689.9 bits (1779), Expect = 3.5e-197
Identity = 381/780 (48.85%), Postives = 508/780 (65.13%), Query Frame = 0


Query: 43  GSQFLVNGAESTKFMQMRIVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKS 102
           G++F +   + +K +Q++IV+AL  G+R GAS +L +L Q   SL+AD+F  IL YCA+S
Sbjct: 51  GNEF-IRCQDESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHDILYYCARS 110

Query: 103 PDPLFSMETWKIMEERGIFLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPV 162
           PDP+F MET+ +M ++ I L+    L ++++LC GG+LD+A   I+ + E   + P+LP+
Sbjct: 111 PDPVFVMETYSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPI 170

Query: 163 YNCFLRACAKRQSMVHVSRCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFV 222
           YN FL ACA+ +S+ H S+CL+LMD + VGKN  TY  LLKLAV Q+NLS+V++IW  +V
Sbjct: 171 YNFFLGACARTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYV 230

Query: 223 HYYSPSFLSLRKFIWSCTRLGDLKSAYMTLQKMVGLA------VGAAGGKLPSLGLDIPI 282
           ++Y+   LSLR+FIWS TRLGDLKSAY  LQ MV LA      V +  GKL S  L IP+
Sbjct: 231 NHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPV 290

Query: 283 PSRTEFYSNNFIFEENGHSTDELCYKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYR 342
           PS+ E  S  F                          F V D   +   S  + L   + 
Sbjct: 291 PSKDETGSEKF-------------------------AFGVTDRIVDCNSSSKVALPKGHN 350

Query: 343 SNFVTKVLRWSFSDVIHACAQTRDCGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGF 402
                +VLRWSF+DVIHAC Q+++  LAEQLM Q                          
Sbjct: 351 KILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQ-------------------------- 410

Query: 403 SDGMQILKIMQQRKLKPYDSTLAAVSISCSKALELDLAEALLEQISACPNPYPFNAFLSA 462
                 LK+MQQ+ LKPYDSTLA V+  CSKAL++DLAE LL+QIS C   YPFN  L+A
Sbjct: 411 ------LKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAA 470

Query: 463 CDMMDRPERALRMLVKMKQMKVLPDVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRM 522
            D +D+PERA+R+L +MK++K+ PD++TYE L+SLFGNVNAPYE G+ LSQVD  KRI  
Sbjct: 471 YDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINA 530

Query: 523 IEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVL 582
           IEMDM ++G QHS +S   +L+ALGAEGM  E++++L  AENL  + N +LGTP YN VL
Sbjct: 531 IEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVL 590

Query: 583 SSLVKSKEIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFC 642
            SL+++ E  M + +F  MK  G   D  T+  MIDCCS++   KSA AL+SMM+R GF 
Sbjct: 591 HSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFS 650

Query: 643 PQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFV 702
           P+ +T+T+L+KI+L    F++ALNLLDQA+ E I LDV+  N IL KA EKG IDVIE++
Sbjct: 651 PKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYI 710

Query: 703 VERMSREKIQPDPSVCHSVFSAYVDLGYHSTAMEALQVLSMRMLCKEDGTS--PDLTDYV 762
           VE+M REK+ PDP+ CH VFS YV+ GYH+TA+EAL VLS+RML +ED  S      +  
Sbjct: 711 VEQMHREKVNPDPTTCHYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKIELE 770

Query: 763 EKFVLSEDSEVDSRILELFECSEENLCFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSY 815
           E FV+SED E +++I+ELF  SEE+L  AL NLRW AMLG  +  S  QSPW   L+N Y
Sbjct: 771 ENFVMSEDPEAETKIIELFRKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARALSNKY 772

[Close]

BLAST of Sed0015348 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-17
Identity = 98/410 (23.90%), Postives = 166/410 (40.49%), Query Frame = 0


Query: 348 FSDVIHACAQTRDCGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQ 407
           +  +IH+ ++      A QL+++M  +G  P + TF+  +  +      ++  +++  M 
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314

Query: 408 QRKLKPYDSTLAAVSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERAL 467
            R   P D T   +     K   +D A+ L  +I   P    FN  +       R + A 
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-PEIVIFNTLIHGFVTHGRLDDAK 374

Query: 468 RMLVKM-KQMKVLPDVKTYEHL---YSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTK 527
            +L  M     ++PDV TY  L   Y   G V    E                +  DM  
Sbjct: 375 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE----------------VLHDMRN 434

Query: 528 HGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSK 587
            G + +  S  IL+      G   E    LN         NT +G   +N ++S+  K  
Sbjct: 435 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT-VG---FNCLISAFCKEH 494

Query: 588 EIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYT 647
            I  AVE+F  M   G  PD  TF  +I     +  +K AL LL  M+  G     +TY 
Sbjct: 495 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 554

Query: 648 SLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSRE 707
           +L+   L  G   +A  L+++   +G  LD +  N +++  C  G +D    + E+M R+
Sbjct: 555 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 614

Query: 708 KIQPDPSVCHSVFSAYVDLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDY 754
              P    C+ + +     G    A+E  + + +R      G++PD+  +
Sbjct: 615 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR------GSTPDIVTF 637

[Close]

BLAST of Sed0015348 vs. ExPASy Swiss-Prot
Match: Q9SV46 (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g54980 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.3e-17
Identity = 134/678 (19.76%), Postives = 269/678 (39.68%), Query Frame = 0


Query: 83  EKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEER---GIFLNHTCSLLMIEALCKGGY 142
           E     +D  +R +S    +P P+ S+   K+++     G  +N      ++ A  K   
Sbjct: 121 ETYGRASDLLIRYVS--TSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQ 180

Query: 143 LDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVSRCLDLMDHKMVGKNESTYS 202
            D A  ++N + E   + P  P  N  L A  +R S+         M    V  +  T  
Sbjct: 181 TDHAVDIVNQMLELD-VIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQ 240

Query: 203 ELLKLAVCQKNLSSVHEIWADFVHY-YSPSFLSLRKFIWSCTRLGDLKSAYMTLQKMVGL 262
            L++ ++ ++  +   E+ +  +     P  L     + +C +  DL  A   L++M   
Sbjct: 241 LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREM--- 300

Query: 263 AVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELCYKKMVPHDGGIGKFSVND 322
                          + +PS+  + S      + G+  D +  K  +  DG     S+N 
Sbjct: 301 -----------KEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG----ISMNV 360

Query: 323 IKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRDCGLAEQLMQQMHELGLQP 382
           +    + +G    +NN               D++ A            L  +M + G  P
Sbjct: 361 VAATSLITGH--CKNN---------------DLVSALV----------LFDKMEKEGPSP 420

Query: 383 SSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAAVSISCSKALELDLAEALL 442
           +S TF   +            ++  K M+   L P    +  +     K  + + A  L 
Sbjct: 421 NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF 480

Query: 443 EQI--SACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLPDVKTYEHLYSLFGNVN 502
           ++   +   N +  N  LS      + + A  +L KM+   + P+V +Y ++  + G+  
Sbjct: 481 DESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV--MLGHC- 540

Query: 503 APYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLA 562
                  R   +D+A   R++  ++ + G++ ++ +  IL+            L+ +N  
Sbjct: 541 -------RQKNMDLA---RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 600

Query: 563 ENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNM-KHSGSFPDAVTFEWMIDCCS 622
            +     N  +   +Y T+++ L K  +   A EL  NM +        +++  +ID   
Sbjct: 601 TS----SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 660

Query: 623 VMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVV 682
             G + SA+A    M  +G  P ++TYTSL+  +    R D AL + D+  ++G++LD+ 
Sbjct: 661 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 720

Query: 683 IMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYVDLGYHSTAMEALQVL 742
               +++  C++  ++    +   +  E + P   + +S+ S + +LG    A++    L
Sbjct: 721 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD----L 727

Query: 743 SMRMLCKEDGTSPDLTDY 754
             +ML  +DG   DL  Y
Sbjct: 781 YKKML--KDGLRCDLGTY 727

[Close]

BLAST of Sed0015348 vs. ExPASy Swiss-Prot
Match: Q9SUD8 (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana OX=3702 GN=At4g28010 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-16
Identity = 94/383 (24.54%), Postives = 160/383 (41.78%), Query Frame = 0


Query: 364 AEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTL-AAVS 423
           A ++ + M E G++P+ +T+ G +  +       + +Q+L +M ++  +P   T    ++
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360

Query: 424 ISCSKALELDLAE--ALLEQISACPNPYPFNAFLSA-CDMMDRPERALRMLVKMKQMKVL 483
             C   L  D  E   L+++    P+   +N  L   C   D  E +  + + +K     
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420

Query: 484 -PDVKTYEHL----------------YSLF-------GNVNAPYELGDRLSQVDVAKRIR 543
            PDV +Y  L                Y L          V     L   L   DV K + 
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 544 MIEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLFFYYNTHLGTPI---Y 603
           + +       +++S  +   ++      GM       LN+A+ L          P    Y
Sbjct: 481 LWKQISDSKIVRNSD-TYTAMIDGFCKTGM-------LNVAKGLLCKMRVSELQPSVFDY 540

Query: 604 NTVLSSLVKSKEIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSALALLSMMVR 663
           N +LSSL K   +  A  LF  M+   +FPD V+F  MID     G +KSA +LL  M R
Sbjct: 541 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 600

Query: 664 SGFCPQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKACEKGRIDV 716
           +G  P L TY+ L+   L  G  D+A++  D+    G E D  I + +L+    +G  D 
Sbjct: 601 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 660

[Close]

BLAST of Sed0015348 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.8e-15
Identity = 71/286 (24.83%), Postives = 126/286 (44.06%), Query Frame = 0


Query: 448 YPFNAFLSACDMMDRPERALRMLVKMKQMKVLPDVKTYEHLYSLFGNVNAPYELGDRLSQ 507
           Y F+A +SA       E A+ +   MK+  + P++ TY  +    G     +        
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEF-------- 328

Query: 508 VDVAKRIRMIEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLF-FYYNTH 567
               K++     +M ++G+Q   ++   LL      G+          A NLF    N  
Sbjct: 329 ----KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL-------WEAARNLFDEMTNRR 388

Query: 568 LGTPI--YNTVLSSLVKSKEIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSAL 627
           +   +  YNT+L ++ K  ++ +A E+   M      P+ V++  +ID  +  G    AL
Sbjct: 389 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 448

Query: 628 ALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKA 687
            L   M   G     ++Y +L+ I    GR ++AL++L + +S GI+ DVV  N +L   
Sbjct: 449 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 508

Query: 688 CEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYVDLGYHSTAME 731
            ++G+ D ++ V   M RE + P+     ++   Y   G +  AME
Sbjct: 509 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535

[Close]

BLAST of Sed0015348 vs. ExPASy TrEMBL
Match: A0A6J1BT64 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005486 PE=4 SV=1)

HSP 1 Score: 1324.7 bits (3427), Expect = 0.0e+00
Identity = 671/820 (81.83%), Postives = 729/820 (88.90%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRA SR GSIADSLYRFKP EHGR+Q +S+L FHR  LISK S+FL NGAE+TKFMQM+
Sbjct: 1   MHRATSRLGSIADSLYRFKPHEHGRQQASSKLAFHRTLLISKDSEFLGNGAETTKFMQMQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL LGDRS ASN+L+ELGQEK SLTADNFVRILSYCA SPDPLF METW+IME+RGI
Sbjct: 61  IVDALRLGDRSSASNLLMELGQEKHSLTADNFVRILSYCAGSPDPLFVMETWRIMEDRGI 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FLN+TCSLLMIEALCKGGYLDEAFGLINFLAES  MFPVLPVYNCFLRAC K QS VHV 
Sbjct: 121 FLNNTCSLLMIEALCKGGYLDEAFGLINFLAESRVMFPVLPVYNCFLRACVKMQSTVHVG 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLDLMDH+MVGKNE+TYSELLKLAV Q+NLSSVHEIW DFV  YSPS LSLRKFIWS  
Sbjct: 181 QCLDLMDHRMVGKNEATYSELLKLAVFQQNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYA 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDLKSA ++LQKMV LAVGAAGGKLPSL LDIPIPS TEFY NNF FE+N HS+DEL 
Sbjct: 241 RLGDLKSACISLQKMVALAVGAAGGKLPSLELDIPIPSSTEFYRNNFSFEDNEHSSDELY 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KK+V  D  IG+FSVN +KC +  SG LT QNN RS+FV KVLRWSF+DVIHACA TRD
Sbjct: 301 RKKLVTCDDDIGQFSVNGMKCGD-ESGPLTFQNNCRSSFVMKVLRWSFNDVIHACAFTRD 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQM +LGLQPS HTFDGFVRSVVSE+GFSDGM+ILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMLDLGLQPSCHTFDGFVRSVVSERGFSDGMKILKIMQQRKLKPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VSISCSKALELDLAEALLEQISACP P+PFNAFL ACD MD+PERA+RMLVKMKQ+KVLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACPYPHPFNAFLKACDTMDQPERAMRMLVKMKQLKVLP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           +V TYEHLYSLFGNVNAPYE G+RLSQ D  KRIRMIEMDM KHGIQHS+LSM  LLKAL
Sbjct: 481 NVNTYEHLYSLFGNVNAPYEEGNRLSQADAGKRIRMIEMDMAKHGIQHSNLSMTNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGMT ELLQYL++AENLF+Y NT+LGTP+YNTVL  LV+SKEIHMA+ELFNNMKHSG 
Sbjct: 541 GAEGMTKELLQYLSVAENLFYYNNTYLGTPVYNTVLHFLVESKEIHMAIELFNNMKHSGF 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDA TFE M+DCCSVM CLKSA ALLSMMVR+GFCPQ+LTYTSLVKIVL    FDDALN
Sbjct: 601 FPDAATFEMMVDCCSVMECLKSAFALLSMMVRTGFCPQILTYTSLVKIVLRSEGFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGI+LDVVIMN IL KACEKGR+DVIEFV+ERM+REKIQPDPS CHSVFSAYV
Sbjct: 661 LLDQASSEGIQLDVVIMNTILLKACEKGRVDVIEFVIERMNREKIQPDPSTCHSVFSAYV 720

Query: 721 DLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENL 780
           +LGYHSTAMEALQVLSMRML KE+  SPDLT+YVE FVL+ED   D RILE F+CSEE+L
Sbjct: 721 NLGYHSTAMEALQVLSMRMLSKEEDASPDLTEYVENFVLAEDPGADLRILEFFKCSEESL 780

Query: 781 CFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDDYRNS 821
            FALFNLRWSAMLGYSLCSSP+QSPW MRLANSYD  R+S
Sbjct: 781 SFALFNLRWSAMLGYSLCSSPNQSPWAMRLANSYDANRSS 819

[Close]

BLAST of Sed0015348 vs. ExPASy TrEMBL
Match: A0A6J1F9C6 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443493 PE=4 SV=1)

HSP 1 Score: 1322.4 bits (3421), Expect = 0.0e+00
Identity = 666/816 (81.62%), Postives = 732/816 (89.71%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRAR R GSIADSLYRF+P EHGR+Q+A+++VF RA LIS+G ++L N AESTKFMQ +
Sbjct: 1   MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL +GDRS ASN+L+ELGQEK SLTADNFV ILSYCA+SPDPLF METWKIMEERG+
Sbjct: 61  IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FL++TC+LLMI+ALCKGGYLDEAFGLI+FLAES  MFPVLPVYN FLRAC KRQS VHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLD+MD +MVGKNE+TYSELLK+AVCQKNLSSVHEIW DFV  YSPS LSLRKFIW  T
Sbjct: 181 QCLDIMDRRMVGKNEATYSELLKVAVCQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWCYT 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDLKSA+  LQKMV L +GAAG KLPSL LDIP+P RTEFY +NF FEENG STDE+ 
Sbjct: 241 RLGDLKSAHTALQKMVALVIGAAGQKLPSLELDIPVPLRTEFYHDNFNFEENGPSTDEVY 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KKMVP +G I +FSVN +KC EV SG  TL +NYRSNFV KVLRWSF+DVI ACA TR+
Sbjct: 301 CKKMVPCEGDIEQFSVNGMKCGEVESGR-TLPSNYRSNFVMKVLRWSFNDVICACALTRN 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSE+GFSDG++ILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VSISCSKALELDLAEALLEQISAC  P+PFNAFLSACDMMD+PERA+RML KMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVYPHPFNAFLSACDMMDQPERAMRMLAKMKQMEVLP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           DVKTYE LYSLFGNVNAPYE G+RLSQVD AKRIRMIEMDM KHGIQHSH SM  LLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGMT ELLQYLN+AENLF+Y NT LGTPIYNT L  LV+SKEIHMA+ELFNNMKHSG 
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNNTWLGTPIYNTALHFLVESKEIHMAIELFNNMKHSGL 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDA TFE MIDCCSV+GCLKSA ALLS+M+RSGFCPQ+LTYTSLVKIVLG+ RFDDALN
Sbjct: 601 FPDAATFEMMIDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGIELDVVIMN I++KACEKGRIDVIEFVVE+M R+KIQPDPS CHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKGRIDVIEFVVEKMKRKKIQPDPSTCHSVFSAYV 720

Query: 721 DLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENL 780
            LGYHSTAMEALQVLSMRMLCKE  TSP +T+YVE FVL+EDSE +SRILE F+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEQDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780

Query: 781 CFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDD 817
            FAL NLRWSAMLGYSLCSSP+QSPW MRLA+SYDD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSPNQSPWAMRLASSYDD 815

[Close]

BLAST of Sed0015348 vs. ExPASy TrEMBL
Match: A0A6J1IFV2 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476573 PE=4 SV=1)

HSP 1 Score: 1321.2 bits (3418), Expect = 0.0e+00
Identity = 667/816 (81.74%), Postives = 731/816 (89.58%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRAR R GSIADSLYRF+P EHGR+Q+A+++VF RA LIS+G ++L N AESTKFMQ +
Sbjct: 1   MHRARLRLGSIADSLYRFRPHEHGRKQDANKMVFRRALLISQGIEYLGNEAESTKFMQRQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL +GDRS ASN+L+ELGQEK SLTADNFV ILSYCA+SPDPLF METWKIMEERG+
Sbjct: 61  IVDALRVGDRSSASNLLMELGQEKHSLTADNFVGILSYCARSPDPLFVMETWKIMEERGV 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FL++TC+LLMI+ALCKGGYLDEAFGLI+FLAES  MFPVLPVYN FLRAC KRQS VHVS
Sbjct: 121 FLDNTCTLLMIKALCKGGYLDEAFGLISFLAESRVMFPVLPVYNLFLRACGKRQSTVHVS 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLD+MD +MVGKNE+TYSELLK+AV QKNLSSVHEIW DFV  YSPS LSLRKFIWS T
Sbjct: 181 QCLDMMDRRMVGKNEATYSELLKVAVGQKNLSSVHEIWTDFVKNYSPSVLSLRKFIWSYT 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDLKSAY  LQKMV L +GAAG KL SL LDIP+P RTEFY +NF FEENG STDEL 
Sbjct: 241 RLGDLKSAYTALQKMVTLVIGAAGQKLSSLELDIPVPLRTEFYHDNFNFEENGPSTDELY 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KK+VP +G I +FSVN +KC EV SG LTL +NYRSNFV KVLRWSF+DVI ACA+TR+
Sbjct: 301 CKKVVPCEGDIWQFSVNGMKCGEVESGRLTLPSNYRSNFVMKVLRWSFNDVICACARTRN 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSE+GFSDG++ILKIMQQRKLKPYDSTLAA
Sbjct: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSERGFSDGIKILKIMQQRKLKPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VSISCSKALELDLAEALLEQISAC  P+PFNAFLSACDMMD+PERA+RML KMKQM+VLP
Sbjct: 421 VSISCSKALELDLAEALLEQISACVYPHPFNAFLSACDMMDQPERAMRMLAKMKQMEVLP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           DVKTYE LYSLFGNVNAPYE G+RLSQVD AKRIRMIEMDM KHGIQHSH SM  LLKAL
Sbjct: 481 DVKTYELLYSLFGNVNAPYEEGNRLSQVDAAKRIRMIEMDMEKHGIQHSHFSMMNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGMT ELLQYLN+AENLF+Y NT LGTPIYNT L  LV+SKEIHMA ELFNNMKHSG 
Sbjct: 541 GAEGMTKELLQYLNVAENLFYYNNTCLGTPIYNTALHFLVESKEIHMATELFNNMKHSGL 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDA TFE MIDCCSV+GCLKSA ALLS+M+RSGFCPQ+LTYTSLVKIVLG+ RFDDALN
Sbjct: 601 FPDAATFEMMIDCCSVIGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFERFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGIELDVVIMN I++KACEKGRIDVIEFVVE+M REKIQPDPS CHSVFSAYV
Sbjct: 661 LLDQASSEGIELDVVIMNTIVQKACEKGRIDVIEFVVEKMKREKIQPDPSTCHSVFSAYV 720

Query: 721 DLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENL 780
            LGYHSTAMEALQVLSMRMLCKE  TSP +T+YVE FVL+EDSE +SRILE F+CSEE+L
Sbjct: 721 SLGYHSTAMEALQVLSMRMLCKEHDTSPVVTEYVEDFVLAEDSEAESRILEFFKCSEESL 780

Query: 781 CFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDD 817
            FAL NLRWSAMLGYSLCSS +QSPW MRLA+SYDD
Sbjct: 781 SFALLNLRWSAMLGYSLCSSTNQSPWAMRLASSYDD 816

[Close]

BLAST of Sed0015348 vs. ExPASy TrEMBL
Match: A0A1S3CEF2 (pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500041 PE=4 SV=1)

HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 642/820 (78.29%), Postives = 713/820 (86.95%), Query Frame = 0


Query: 1   MHRARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMR 60
           MHRA  R GSIADS+YRFKP E  R+Q+AS+LVFHRA LISKGS+   NGAEST FMQ++
Sbjct: 1   MHRASFRLGSIADSIYRFKPHELVRKQDASKLVFHRALLISKGSEIWGNGAESTAFMQIQ 60

Query: 61  IVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGI 120
           IV+AL LGDRS ASN+L+ LGQEK SLTADNFVRILSYCAKSPDPLF METWKIMEERGI
Sbjct: 61  IVDALRLGDRSKASNLLMVLGQEKCSLTADNFVRILSYCAKSPDPLFVMETWKIMEERGI 120

Query: 121 FLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVS 180
           FLN+TCSLLMIEALCKGGYLDEAFGLINFLAESH MFPVLPVYNCFLRACA RQS VH S
Sbjct: 121 FLNNTCSLLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACAIRQSTVHAS 180

Query: 181 RCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCT 240
           +CLDLMDH+MVGKNE+TYSELLKLAVCQ+N SSVHEIW DFV  YSPS  SLRKFIWS  
Sbjct: 181 QCLDLMDHRMVGKNEATYSELLKLAVCQENSSSVHEIWTDFVKNYSPSVSSLRKFIWSFA 240

Query: 241 RLGDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELC 300
           RLGDL SAY  LQKMV LA GA G KL S  LDIPIP RTEFY NNF FEE   S DE  
Sbjct: 241 RLGDLTSAYTALQKMVALATGATGRKLQS--LDIPIPLRTEFYHNNFNFEEKEPSIDEFF 300

Query: 301 YKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRD 360
            KKMVP +G +G  SVND+KC E  +G LT+ NN+RS+FV KVLRWS +DV+ +C+   +
Sbjct: 301 CKKMVPWNGDVGGISVNDMKCGE--TGPLTVPNNHRSSFVRKVLRWSSNDVMRSCSLAGN 360

Query: 361 CGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAA 420
           CGLAEQLMQQMH+LGLQPSSHTFDGFVRSVVSE+GFS GM+ILK+MQQR L+PYDSTLAA
Sbjct: 361 CGLAEQLMQQMHKLGLQPSSHTFDGFVRSVVSERGFSAGMEILKVMQQRGLEPYDSTLAA 420

Query: 421 VSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLP 480
           VS+SCSKALELDLAEALLE++SACP PYPFNAFLSAC +MD+PERA+RMLVKMKQMKV+P
Sbjct: 421 VSVSCSKALELDLAEALLERLSACPYPYPFNAFLSACGVMDQPERAMRMLVKMKQMKVVP 480

Query: 481 DVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKAL 540
           DV+TYE LYSLFGNVNAPYE GD+LSQVD AKRIRMIEMDM KHGIQ+SH SM  LLKAL
Sbjct: 481 DVRTYELLYSLFGNVNAPYEEGDKLSQVDAAKRIRMIEMDMGKHGIQYSHFSMMNLLKAL 540

Query: 541 GAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGS 600
           GAEGM  E+LQYLNLAENLF+Y NT LG P+YNTVL  LV SKEI+MA+ELFNNMK+SG 
Sbjct: 541 GAEGMKKEVLQYLNLAENLFYYNNTSLGMPVYNTVLHFLVDSKEIYMAIELFNNMKNSGF 600

Query: 601 FPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALN 660
           FPDA TFE M+DCCSVMGCLKSA ALLS+M+RSGFCPQ+LTYTSLVKIVLG+GRFDDALN
Sbjct: 601 FPDAATFEIMLDCCSVMGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFGRFDDALN 660

Query: 661 LLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYV 720
           LLDQASSEGIELDV+IMN I+ KACEK RIDVIEF+VE+M+REKIQPDPS CH+VFSAYV
Sbjct: 661 LLDQASSEGIELDVIIMNTIMRKACEKARIDVIEFLVEKMNREKIQPDPSTCHNVFSAYV 720

Query: 721 DLGYHSTAMEALQVLSMRM-LCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEEN 780
           +LGYHSTAMEALQVLSMRM LC+ED  S  +T+Y+E FVL+ED+  DSRI E F+CS E 
Sbjct: 721 NLGYHSTAMEALQVLSMRMLLCEEDDDS--VTEYMENFVLAEDTGADSRIAEFFKCSREY 780

Query: 781 LCFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDDYRN 820
           L FALFNLRW AMLGYS+C SP+QSPW MRLA+SYD Y+N
Sbjct: 781 LGFALFNLRWCAMLGYSVCCSPNQSPWAMRLASSYDGYKN 814

[Close]

BLAST of Sed0015348 vs. ExPASy TrEMBL
Match: A0A5A7V601 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5463G00050 PE=4 SV=1)

HSP 1 Score: 1256.1 bits (3249), Expect = 0.0e+00
Identity = 638/818 (78.00%), Postives = 711/818 (86.92%), Query Frame = 0


Query: 3   RARSRFGSIADSLYRFKPDEHGRRQEASRLVFHRAFLISKGSQFLVNGAESTKFMQMRIV 62
           +A  R GSIADS+YRFKP E  R+Q+AS+LVFHRA LISKGS+   NGAEST FMQ++IV
Sbjct: 70  KASFRLGSIADSIYRFKPHELVRKQDASKLVFHRALLISKGSEIWGNGAESTAFMQIQIV 129

Query: 63  NALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEERGIFL 122
           +AL LGDR+ ASN+L+ LGQEK SLTADNFVRILSYCAKSPDPLF METWKIMEERGIFL
Sbjct: 130 DALRLGDRNKASNLLMVLGQEKCSLTADNFVRILSYCAKSPDPLFVMETWKIMEERGIFL 189

Query: 123 NHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVSRC 182
           N+TCSLLMIEALCKGGYLDEAFGLINFLAESH MFPVLPVYNCFLRACA RQS VH S+C
Sbjct: 190 NNTCSLLMIEALCKGGYLDEAFGLINFLAESHVMFPVLPVYNCFLRACAIRQSTVHASQC 249

Query: 183 LDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFVHYYSPSFLSLRKFIWSCTRL 242
           LDLMDH+MVGKNE+TYSELLKLAVCQ+N SSVHEIW DFV  YSPS  SLRKFIWS  RL
Sbjct: 250 LDLMDHRMVGKNEATYSELLKLAVCQENSSSVHEIWTDFVKNYSPSVSSLRKFIWSFARL 309

Query: 243 GDLKSAYMTLQKMVGLAVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELCYK 302
           GDL SAY  LQKMV LA GA G KL S  LDIPIP RTEFY NNF FEE   S DE   K
Sbjct: 310 GDLTSAYTALQKMVALATGATGRKLQS--LDIPIPLRTEFYHNNFNFEEKEPSIDEFFCK 369

Query: 303 KMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRDCG 362
           KMVP +G +G  SVND+KC E  +G LT+ NN+RS+FV KVLRWS +DV+ +C+   +CG
Sbjct: 370 KMVPWNGDVGGISVNDMKCGE--TGPLTVPNNHRSSFVRKVLRWSSNDVMRSCSLAGNCG 429

Query: 363 LAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAAVS 422
           LAEQLMQQMH+LGLQPSSHTFDGFVRSVVSE+GFS GM+ILK+MQQR L+PYDSTLAAVS
Sbjct: 430 LAEQLMQQMHKLGLQPSSHTFDGFVRSVVSERGFSAGMEILKVMQQRGLEPYDSTLAAVS 489

Query: 423 ISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLPDV 482
           +SCSKALELDLAEALLE++SACP PYPFNAFLSAC +MD+PERA+RMLVKMKQMKV+PDV
Sbjct: 490 VSCSKALELDLAEALLERLSACPYPYPFNAFLSACGVMDQPERAMRMLVKMKQMKVVPDV 549

Query: 483 KTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKALGA 542
           +TYE LYSLFGNVNAPYE GD+LSQVD AKRIRMIEMDM KHGIQ+SH SM  LLKALGA
Sbjct: 550 RTYELLYSLFGNVNAPYEEGDKLSQVDAAKRIRMIEMDMGKHGIQYSHFSMMNLLKALGA 609

Query: 543 EGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNMKHSGSFP 602
           EGM  E+LQYLNLAENLF+Y NT LG P+YNTVL  LV SKEI+MA+ELFNNMK+SG FP
Sbjct: 610 EGMKKEVLQYLNLAENLFYYNNTSLGMPVYNTVLHFLVDSKEIYMAIELFNNMKNSGFFP 669

Query: 603 DAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALNLL 662
           DA TFE M+DCCSVMGCLKSA ALLS+M+RSGFCPQ+LTYTSLVKIVLG+GRFDDALNLL
Sbjct: 670 DAATFEIMLDCCSVMGCLKSAFALLSLMIRSGFCPQILTYTSLVKIVLGFGRFDDALNLL 729

Query: 663 DQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYVDL 722
           DQASSEGIELDV+IMN I+ KACEK RIDVIEF+VE+M+REKIQPDPS CH+VFSAYV+L
Sbjct: 730 DQASSEGIELDVIIMNTIMRKACEKARIDVIEFLVEKMNREKIQPDPSTCHNVFSAYVNL 789

Query: 723 GYHSTAMEALQVLSMRM-LCKEDGTSPDLTDYVEKFVLSEDSEVDSRILELFECSEENLC 782
           GYHSTAMEALQVLSMRM LC+ED  S  +T+Y+E FVL+ED+  DSRI E F+CS E L 
Sbjct: 790 GYHSTAMEALQVLSMRMLLCEEDDDS--VTEYMENFVLAEDTGADSRIAEFFKCSREYLG 849

Query: 783 FALFNLRWSAMLGYSLCSSPSQSPWTMRLANSYDDYRN 820
           FALFNLRW AMLGYS+C SP+QSPW MRLA+SYD Y+N
Sbjct: 850 FALFNLRWCAMLGYSVCCSPNQSPWAMRLASSYDGYKN 881

[Close]

BLAST of Sed0015348 vs. TAIR 10
Match: AT1G76280.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 732.3 bits (1889), Expect = 4.4e-211
Identity = 395/780 (50.64%), Postives = 528/780 (67.69%), Query Frame = 0


Query: 43  GSQFLVNGAESTKFMQMRIVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKS 102
           G++F +   + +K +Q++IV+AL  G+R GAS +L +L Q   SL+AD+F  IL YCA+S
Sbjct: 51  GNEF-IRCQDESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHDILYYCARS 110

Query: 103 PDPLFSMETWKIMEERGIFLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPV 162
           PDP+    T+ +M ++ I L+    L ++++LC GG+LD+A   I+ + E   + P+LP+
Sbjct: 111 PDPV----TYSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPI 170

Query: 163 YNCFLRACAKRQSMVHVSRCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFV 222
           YN FL ACA+ +S+ H S+CL+LMD + VGKN  TY  LLKLAV Q+NLS+V++IW  +V
Sbjct: 171 YNFFLGACARTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYV 230

Query: 223 HYYSPSFLSLRKFIWSCTRLGDLKSAYMTLQKMVGLA------VGAAGGKLPSLGLDIPI 282
           ++Y+   LSLR+FIWS TRLGDLKSAY  LQ MV LA      V +  GKL S  L IP+
Sbjct: 231 NHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPV 290

Query: 283 PSRTEFYSNNFIFEENGHSTDELCYKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYR 342
           PS+ E  S  F                          F V D   +   S  + L   + 
Sbjct: 291 PSKDETGSEKF-------------------------AFGVTDRIVDCNSSSKVALPKGHN 350

Query: 343 SNFVTKVLRWSFSDVIHACAQTRDCGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGF 402
                +VLRWSF+DVIHAC Q+++  LAEQLM QM  LGL PSSHT+DGF+R+V   +G+
Sbjct: 351 KILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGY 410

Query: 403 SDGMQILKIMQQRKLKPYDSTLAAVSISCSKALELDLAEALLEQISACPNPYPFNAFLSA 462
             GM +LK+MQQ+ LKPYDSTLA V+  CSKAL++DLAE LL+QIS C   YPFN  L+A
Sbjct: 411 EYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAA 470

Query: 463 CDMMDRPERALRMLVKMKQMKVLPDVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRM 522
            D +D+PERA+R+L +MK++K+ PD++TYE L+SLFGNVNAPYE G+ LSQVD  KRI  
Sbjct: 471 YDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINA 530

Query: 523 IEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVL 582
           IEMDM ++G QHS +S   +L+ALGAEGM  E++++L  AENL  + N +LGTP YN VL
Sbjct: 531 IEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVL 590

Query: 583 SSLVKSKEIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFC 642
            SL+++ E  M + +F  MK  G   D  T+  MIDCCS++   KSA AL+SMM+R GF 
Sbjct: 591 HSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFS 650

Query: 643 PQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFV 702
           P+ +T+T+L+KI+L    F++ALNLLDQA+ E I LDV+  N IL KA EKG IDVIE++
Sbjct: 651 PKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYI 710

Query: 703 VERMSREKIQPDPSVCHSVFSAYVDLGYHSTAMEALQVLSMRMLCKEDGTS--PDLTDYV 762
           VE+M REK+ PDP+ CH VFS YV+ GYH+TA+EAL VLS+RML +ED  S      +  
Sbjct: 711 VEQMHREKVNPDPTTCHYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKIELE 770

Query: 763 EKFVLSEDSEVDSRILELFECSEENLCFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSY 815
           E FV+SED E +++I+ELF  SEE+L  AL NLRW AMLG  +  S  QSPW   L+N Y
Sbjct: 771 ENFVMSEDPEAETKIIELFRKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARALSNKY 800

[Close]

BLAST of Sed0015348 vs. TAIR 10
Match: AT1G76280.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 689.9 bits (1779), Expect = 2.5e-198
Identity = 381/780 (48.85%), Postives = 508/780 (65.13%), Query Frame = 0


Query: 43  GSQFLVNGAESTKFMQMRIVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKS 102
           G++F +   + +K +Q++IV+AL  G+R GAS +L +L Q   SL+AD+F  IL YCA+S
Sbjct: 51  GNEF-IRCQDESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHDILYYCARS 110

Query: 103 PDPLFSMETWKIMEERGIFLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPV 162
           PDP+F MET+ +M ++ I L+    L ++++LC GG+LD+A   I+ + E   + P+LP+
Sbjct: 111 PDPVFVMETYSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPI 170

Query: 163 YNCFLRACAKRQSMVHVSRCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFV 222
           YN FL ACA+ +S+ H S+CL+LMD + VGKN  TY  LLKLAV Q+NLS+V++IW  +V
Sbjct: 171 YNFFLGACARTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYV 230

Query: 223 HYYSPSFLSLRKFIWSCTRLGDLKSAYMTLQKMVGLA------VGAAGGKLPSLGLDIPI 282
           ++Y+   LSLR+FIWS TRLGDLKSAY  LQ MV LA      V +  GKL S  L IP+
Sbjct: 231 NHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPV 290

Query: 283 PSRTEFYSNNFIFEENGHSTDELCYKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYR 342
           PS+ E  S  F                          F V D   +   S  + L   + 
Sbjct: 291 PSKDETGSEKF-------------------------AFGVTDRIVDCNSSSKVALPKGHN 350

Query: 343 SNFVTKVLRWSFSDVIHACAQTRDCGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGF 402
                +VLRWSF+DVIHAC Q+++  LAEQLM Q                          
Sbjct: 351 KILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQ-------------------------- 410

Query: 403 SDGMQILKIMQQRKLKPYDSTLAAVSISCSKALELDLAEALLEQISACPNPYPFNAFLSA 462
                 LK+MQQ+ LKPYDSTLA V+  CSKAL++DLAE LL+QIS C   YPFN  L+A
Sbjct: 411 ------LKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAA 470

Query: 463 CDMMDRPERALRMLVKMKQMKVLPDVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRM 522
            D +D+PERA+R+L +MK++K+ PD++TYE L+SLFGNVNAPYE G+ LSQVD  KRI  
Sbjct: 471 YDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINA 530

Query: 523 IEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVL 582
           IEMDM ++G QHS +S   +L+ALGAEGM  E++++L  AENL  + N +LGTP YN VL
Sbjct: 531 IEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVL 590

Query: 583 SSLVKSKEIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFC 642
            SL+++ E  M + +F  MK  G   D  T+  MIDCCS++   KSA AL+SMM+R GF 
Sbjct: 591 HSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFS 650

Query: 643 PQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFV 702
           P+ +T+T+L+KI+L    F++ALNLLDQA+ E I LDV+  N IL KA EKG IDVIE++
Sbjct: 651 PKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYI 710

Query: 703 VERMSREKIQPDPSVCHSVFSAYVDLGYHSTAMEALQVLSMRMLCKEDGTS--PDLTDYV 762
           VE+M REK+ PDP+ CH VFS YV+ GYH+TA+EAL VLS+RML +ED  S      +  
Sbjct: 711 VEQMHREKVNPDPTTCHYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKIELE 770

Query: 763 EKFVLSEDSEVDSRILELFECSEENLCFALFNLRWSAMLGYSLCSSPSQSPWTMRLANSY 815
           E FV+SED E +++I+ELF  SEE+L  AL NLRW AMLG  +  S  QSPW   L+N Y
Sbjct: 771 ENFVMSEDPEAETKIIELFRKSEEHLAAALLNLRWCAMLGGRIIWSEDQSPWARALSNKY 772

[Close]

BLAST of Sed0015348 vs. TAIR 10
Match: AT1G76280.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 609.8 bits (1571), Expect = 3.3e-174
Identity = 328/658 (49.85%), Postives = 445/658 (67.63%), Query Frame = 0


Query: 43  GSQFLVNGAESTKFMQMRIVNALCLGDRSGASNMLIELGQEKLSLTADNFVRILSYCAKS 102
           G++F +   + +K +Q++IV+AL  G+R GAS +L +L Q   SL+AD+F  IL YCA+S
Sbjct: 51  GNEF-IRCQDESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHDILYYCARS 110

Query: 103 PDPLFSMETWKIMEERGIFLNHTCSLLMIEALCKGGYLDEAFGLINFLAESHAMFPVLPV 162
           PDP+F MET+ +M ++ I L+    L ++++LC GG+LD+A   I+ + E   + P+LP+
Sbjct: 111 PDPVFVMETYSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPI 170

Query: 163 YNCFLRACAKRQSMVHVSRCLDLMDHKMVGKNESTYSELLKLAVCQKNLSSVHEIWADFV 222
           YN FL ACA+ +S+ H S+CL+LMD + VGKN  TY  LLKLAV Q+NLS+V++IW  +V
Sbjct: 171 YNFFLGACARTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYV 230

Query: 223 HYYSPSFLSLRKFIWSCTRLGDLKSAYMTLQKMVGLA------VGAAGGKLPSLGLDIPI 282
           ++Y+   LSLR+FIWS TRLGDLKSAY  LQ MV LA      V +  GKL S  L IP+
Sbjct: 231 NHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSNRGKLHSTRLYIPV 290

Query: 283 PSRTEFYSNNFIFEENGHSTDELCYKKMVPHDGGIGKFSVNDIKCEEVGSGSLTLQNNYR 342
           PS+ E  S  F                          F V D   +   S  + L   + 
Sbjct: 291 PSKDETGSEKF-------------------------AFGVTDRIVDCNSSSKVALPKGHN 350

Query: 343 SNFVTKVLRWSFSDVIHACAQTRDCGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGF 402
                +VLRWSF+DVIHAC Q+++  LAEQLM QM  LGL PSSHT+DGF+R+V   +G+
Sbjct: 351 KILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGY 410

Query: 403 SDGMQILKIMQQRKLKPYDSTLAAVSISCSKALELDLAEALLEQISACPNPYPFNAFLSA 462
             GM +LK+MQQ+ LKPYDSTLA V+  CSKAL++DLAE LL+QIS C   YPFN  L+A
Sbjct: 411 EYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAA 470

Query: 463 CDMMDRPERALRMLVKMKQMKVLPDVKTYEHLYSLFGNVNAPYELGDRLSQVDVAKRIRM 522
            D +D+PERA+R+L +MK++K+ PD++TYE L+SLFGNVNAPYE G+ LSQVD  KRI  
Sbjct: 471 YDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINA 530

Query: 523 IEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVL 582
           IEMDM ++G QHS +S   +L+ALGAEGM  E++++L  AENL  + N +LGTP YN VL
Sbjct: 531 IEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVL 590

Query: 583 SSLVKSKEIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFC 642
            SL+++ E  M + +F  MK  G   D  T+  MIDCCS++   KSA AL+SMM+R GF 
Sbjct: 591 HSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFS 650

Query: 643 PQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKACEKGRIDVIE 695
           P+ +T+T+L+KI+L    F++ALNLLDQA+ E I LDV+  N IL KA EK +I V++
Sbjct: 651 PKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKVKIFVVK 682

[Close]

BLAST of Sed0015348 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 2.3e-18
Identity = 98/410 (23.90%), Postives = 166/410 (40.49%), Query Frame = 0


Query: 348 FSDVIHACAQTRDCGLAEQLMQQMHELGLQPSSHTFDGFVRSVVSEKGFSDGMQILKIMQ 407
           +  +IH+ ++      A QL+++M  +G  P + TF+  +  +      ++  +++  M 
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314

Query: 408 QRKLKPYDSTLAAVSISCSKALELDLAEALLEQISACPNPYPFNAFLSACDMMDRPERAL 467
            R   P D T   +     K   +D A+ L  +I   P    FN  +       R + A 
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-PEIVIFNTLIHGFVTHGRLDDAK 374

Query: 468 RMLVKM-KQMKVLPDVKTYEHL---YSLFGNVNAPYELGDRLSQVDVAKRIRMIEMDMTK 527
            +L  M     ++PDV TY  L   Y   G V    E                +  DM  
Sbjct: 375 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE----------------VLHDMRN 434

Query: 528 HGIQHSHLSMKILLKALGAEGMTMELLQYLNLAENLFFYYNTHLGTPIYNTVLSSLVKSK 587
            G + +  S  IL+      G   E    LN         NT +G   +N ++S+  K  
Sbjct: 435 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT-VG---FNCLISAFCKEH 494

Query: 588 EIHMAVELFNNMKHSGSFPDAVTFEWMIDCCSVMGCLKSALALLSMMVRSGFCPQLLTYT 647
            I  AVE+F  M   G  PD  TF  +I     +  +K AL LL  M+  G     +TY 
Sbjct: 495 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 554

Query: 648 SLVKIVLGYGRFDDALNLLDQASSEGIELDVVIMNIILEKACEKGRIDVIEFVVERMSRE 707
           +L+   L  G   +A  L+++   +G  LD +  N +++  C  G +D    + E+M R+
Sbjct: 555 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 614

Query: 708 KIQPDPSVCHSVFSAYVDLGYHSTAMEALQVLSMRMLCKEDGTSPDLTDY 754
              P    C+ + +     G    A+E  + + +R      G++PD+  +
Sbjct: 615 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR------GSTPDIVTF 637

[Close]

BLAST of Sed0015348 vs. TAIR 10
Match: AT3G54980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 3.0e-18
Identity = 134/678 (19.76%), Postives = 269/678 (39.68%), Query Frame = 0


Query: 83  EKLSLTADNFVRILSYCAKSPDPLFSMETWKIMEER---GIFLNHTCSLLMIEALCKGGY 142
           E     +D  +R +S    +P P+ S+   K+++     G  +N      ++ A  K   
Sbjct: 121 ETYGRASDLLIRYVS--TSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQ 180

Query: 143 LDEAFGLINFLAESHAMFPVLPVYNCFLRACAKRQSMVHVSRCLDLMDHKMVGKNESTYS 202
            D A  ++N + E   + P  P  N  L A  +R S+         M    V  +  T  
Sbjct: 181 TDHAVDIVNQMLELD-VIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQ 240

Query: 203 ELLKLAVCQKNLSSVHEIWADFVHY-YSPSFLSLRKFIWSCTRLGDLKSAYMTLQKMVGL 262
            L++ ++ ++  +   E+ +  +     P  L     + +C +  DL  A   L++M   
Sbjct: 241 LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREM--- 300

Query: 263 AVGAAGGKLPSLGLDIPIPSRTEFYSNNFIFEENGHSTDELCYKKMVPHDGGIGKFSVND 322
                          + +PS+  + S      + G+  D +  K  +  DG     S+N 
Sbjct: 301 -----------KEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG----ISMNV 360

Query: 323 IKCEEVGSGSLTLQNNYRSNFVTKVLRWSFSDVIHACAQTRDCGLAEQLMQQMHELGLQP 382
           +    + +G    +NN               D++ A            L  +M + G  P
Sbjct: 361 VAATSLITGH--CKNN---------------DLVSALV----------LFDKMEKEGPSP 420

Query: 383 SSHTFDGFVRSVVSEKGFSDGMQILKIMQQRKLKPYDSTLAAVSISCSKALELDLAEALL 442
           +S TF   +            ++  K M+   L P    +  +     K  + + A  L 
Sbjct: 421 NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF 480

Query: 443 EQI--SACPNPYPFNAFLSACDMMDRPERALRMLVKMKQMKVLPDVKTYEHLYSLFGNVN 502
           ++   +   N +  N  LS      + + A  +L KM+   + P+V +Y ++  + G+  
Sbjct: 481 DESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV--MLGHC- 540

Query: 503 APYELGDRLSQVDVAKRIRMIEMDMTKHGIQHSHLSMKILLKALGAEGMTMELLQYLNLA 562
                  R   +D+A   R++  ++ + G++ ++ +  IL+            L+ +N  
Sbjct: 541 -------RQKNMDLA---RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 600

Query: 563 ENLFFYYNTHLGTPIYNTVLSSLVKSKEIHMAVELFNNM-KHSGSFPDAVTFEWMIDCCS 622
            +     N  +   +Y T+++ L K  +   A EL  NM +        +++  +ID   
Sbjct: 601 TS----SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 660

Query: 623 VMGCLKSALALLSMMVRSGFCPQLLTYTSLVKIVLGYGRFDDALNLLDQASSEGIELDVV 682
             G + SA+A    M  +G  P ++TYTSL+  +    R D AL + D+  ++G++LD+ 
Sbjct: 661 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 720

Query: 683 IMNIILEKACEKGRIDVIEFVVERMSREKIQPDPSVCHSVFSAYVDLGYHSTAMEALQVL 742
               +++  C++  ++    +   +  E + P   + +S+ S + +LG    A++    L
Sbjct: 721 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD----L 727

Query: 743 SMRMLCKEDGTSPDLTDY 754
             +ML  +DG   DL  Y
Sbjct: 781 YKKML--KDGLRCDLGTY 727

The following BLAST results are available for this feature:

BLAST of Sed0015348 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536089.1	0.0e+00	81.86	pentatricopeptide repeat-containing protein At1g76280 [Cucurbita pepo subsp. pep...	[more]
XP_022132690.1	0.0e+00	81.83	pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Momordica char...	[more]
XP_022937086.1	0.0e+00	81.62	pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Cucurbita mosc...	[more]
XP_022976056.1	0.0e+00	81.74	pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Cucurbita maxi...	[more]
XP_038897387.1	0.0e+00	80.00	pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Benincasa hisp...	[more]

BLAST of Sed0015348 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGQ6	3.5e-197	48.85	Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana OX...	[more]
Q9FMF6	3.3e-17	23.90	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
Q9SV46	4.3e-17	19.76	Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidop...	[more]
Q9SUD8	3.6e-16	24.54	Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana OX...	[more]
Q9SIC9	6.8e-15	24.83	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop...	[more]

BLAST of Sed0015348 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BT64	0.0e+00	81.83	pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Momordica ch...	[more]
A0A6J1F9C6	0.0e+00	81.62	pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1IFV2	0.0e+00	81.74	pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucurbita ma...	[more]
A0A1S3CEF2	0.0e+00	78.29	pentatricopeptide repeat-containing protein At1g76280 isoform X1 OS=Cucumis melo...	[more]
A0A5A7V601	0.0e+00	78.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Sed0015348 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76280.3	4.4e-211	50.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G76280.1	2.5e-198	48.85	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G76280.2	3.3e-174	49.85	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G64320.1	2.3e-18	23.90	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G54980.1	3.0e-18	19.76	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 446..494 e-value: 0.0024 score: 17.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 571..614 e-value: 1.0E-10 score: 41.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 130..148 e-value: 0.15 score: 12.4 coord: 347..376 e-value: 0.15 score: 12.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 610..637 e-value: 0.0013 score: 16.7 coord: 571..604 e-value: 4.4E-7 score: 27.7 coord: 348..379 e-value: 0.0016 score: 16.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 603..637 score: 10.161182
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 446..480 score: 9.032168
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 568..602 score: 9.88715
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 566..692 e-value: 2.8E-24 score: 87.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 336..441 e-value: 5.4E-12 score: 47.7 coord: 442..565 e-value: 8.4E-10 score: 40.5 coord: 57..261 e-value: 4.9E-15 score: 57.7
None	No IPR available	PANTHER	PTHR47859	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 2..688

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015348.1	Sed0015348.1	mRNA
Sed0015348.2	Sed0015348.2	mRNA
Sed0015348.3	Sed0015348.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding