Sed0015339 (gene) Chayote v1

Overview


Name	Sed0015339
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Sulfiredoxin
Location	LG01: 14867626 .. 14870816 (-)
RNA-Seq Expression	Sed0015339
Synteny	Sed0015339

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTCCAAACACAGGCTTAACTGTAGAGTTGTGATGGGATTCGGTTCTTCAATTGAATTATTGAGTCCTTTGAACTAAAAACGATAACAATCGTGAAAATTTCATGAGGTGTTATAAAATTCTATGGGGAGATTATAGAACTGTCAATCCAGACATTCTACTCCGCATTGGCGAGACAGAGAGAGAGAGAGTAGTGGGCGATGATGGCTAATCTTTTCATTCTCAAATTCCCAAATTTCAATTCCAGCTCAAGAATCATCTCTGCTTCAGCTTCATCGAACGGTTCTTCTCTCTTTCTGGTTTTCATTGATTAATTTCTCTCTTTTTTTCACTCAAAACAGTGTATGAATTAATTGGGTATTTTACCAATGAAATTGTAGGCGCTCATCCTTTATCGGCCGGCACCGGCACCGGCACCGGAGGTGGGCCTGTGATTCTGGAACTTCCTCTGGAGAAGATAAGGAGGCCATTAATGAGGACCAGATCTAACGACCCCAATAAGGTTAAAGAACTAATGGACAGTATACAACAAATTGGGCTTCAAGTTCCCGTGAGCTTTTTCTCTTCTCTTCTCTTCAATTCATCTTAACTTAACTCGTTTTCAATCTGGTTCGTCTGAAGATTAATGGGCTGAAATGATTTTGTTATTAGGGTTTATGATTTCTCTTACTGTCTACTACTGTTCTGAGTTTGAGGCTCTAAGGAATTGATATTATTTTAGTAGTGTAGTTAAGGATGAAATTCTTGGCATGTGTTATGATTTGGACTTGACTGTGGTAATCTGATAGGATGAGCAACTTTTAAGTGATGGAATATATGGTTTTGTTGCAAATTCATCTATGTTACTGGAGATGGCGCAGGAACTTCTTGATGAATGATTTTTTATATTCAAAAGTTCAATTGAGTAAATAGCTTAACACATTTGATAACCATTTGACTTTTTTCCTATAAAAAAAACATTGGTCTCATTTCTTTCAATGTAGTTAACTAGCCCTTAGTATCATGTTGAGGAATACTTGGTGGTTCAACTACTTGAGAGGGAGAGTATCGTAGTTTACCGTGTTATCTCATTGTATAAAAACAACTCAAAACCTGACCCAAAATCCAAAACGTTGTAACACTTTCATCTTATCGATGAAAATGTTTTGTTTCTTATAAAAATTAAACATTTGATCTCATTTCGTTCACTGTGGTCCGTAGTTAACTAGACCTCGAGGAACAAAACAGTGAAATGCAGAGGAATAACAAAGGTTTGAACTGGGTTTACTCTGTCCATGACAAACACAATTAGAATACAGTCACCCTAATAGGACTGAGAGAATTAAGTTGATTGAATCAATCGCTGAAATAATTGTGGTGCTCGAGAATTTGATCTTTGCCTGCCAAAGTCCATATGTTAAATGCATCAGGTGCCCTTTCCTTATCGTTAGAGGCATCCGTCGATATTTTGAGTAGTAAATAGAAGTTCTTATTATGAGCATACTAATGTGATAATCATGAACATTTTTAGGGTGAAAGTAGCTGATATTTTTTTGCATTAGGCAACATGTGCCCCGAAGATTTTATATAATGAACATATCATGTTACTTATTTTTTCTGATGTGGGTGCAGATTGATGTACTTGAAGTTGATGGAATTTATTACGGTATGTTTTTCCTTTTTGGATAAGAAACAATTTCATTAATGATTATGAAATTACAACCGGAGGTAGATAAGGTTCAATTACAAAAGAGATCTCTAACTATTAATTAACATGTCATAACTATAAGCATAAAATAGAGGAGAAATTTTATACCACGACACCACCATGTATGTGATATTATCAATGAATCTGTTGTAGGAGGAGAATCTGTCGTTTAAAAGTTTGTTGGTTTCTTTCTAACCACATACTGAGCTTTCAACAACAGATTCTCGCCCTACAACCGATTCATTGATAATGTTACATGCATGGTAAACTACAACAGATTCTCCTCCTAATGAACACTTATCCTATTTCTTTCTTTAAAAAGATTAAGGATATATTTCAAGTTCAATTCACAAACTTCAAAACCTTTCAATTTTGTAACTAATGGTTCTCTGAGCTTTCAACTGTGACTAATTAGATGTTGAGCTTCAATTTTGTGGCTAATAGACTTCTGAACTTTCAATTTTGTGTCTTGACTTCAATATCTTTTAAAGTTTACAAACTTATTAGACTCAAAATCGAAAGTTTAATATTGTTAAAAGTTCTCAGACTTAACTTTTTTGTAAGTTAAGAGAAGTGGTCTACTTAACACAGACATTAAGATTACAGAGACTTGCTTGATACCGATTGTTAATCATCAAAATTATTGTCTTTGTACCATAGACATGTTTCTGTTTTCGTATATTTTGAGTAAGCTTGATTAGGTGTATAGTAATTGGAAATTCAGTTCTGCTTTTATCTTCCATTATGCCATTACAAATTTTCTGTCTATTTGAGCAGCCAAAGATTGTTTTCAAAGAATGTTTGGCAAACTGAAACAAGATTTTCATTCGAATTCGAATTCGAATTCCAACTCAATTGTCTATTTTGGCAAACTAATGTTGCATCCGGTTTGTCATTTTGAAGAACTGGATTCCTTCCCATGTCTATAGGTTTTTCTGGTTGTCATCGTTATGAGGCTCATCAACGCCTTGGACTTCCTACAATCCGCTGCAAAATTCGTCGTGGAACAAAAGAAACTCTGAGGTTTGTTTCACTAAATATTATACATGCCATCTTTTTATAGCATAATAGCGAATTGTGGGATTCAAATTGTAGACCTCGTGATTGTCAACTGAGCTGTTCGGATAGACCTTATGGTTATAAATGTGATCTATTTCTAGTGATTAATTTTACCTTCGTTTAACTTTATCTCATTTCAATGTTTTTTTGTTTTTTTTGTTCTTTATCATCATGCAGGCACCACATGCGTTGAAGTTTCATGAAGCTGCATTGGCAAGTTCCATCAAACTATTTATTACTTTTAATGCCCATCAAAAGCTATTACTCAATGAAACAAGCATGTGTATAATAATAACATGCAAATATTATCAATGTCAAAGTTTACATGTAAATAAACCATTACTTATAGATCCATTTCAATTTCTAAAATCTTTTCTAACTTAAACATTCAAGATAGCAATACATACAAAGCTTTGAGTTCAATTGCGAGAAATTCGAGCTTAT

mRNA sequence

CTCGTCCAAACACAGGCTTAACTGTAGAGTTGTGATGGGATTCGGTTCTTCAATTGAATTATTGAGTCCTTTGAACTAAAAACGATAACAATCGTGAAAATTTCATGAGGTGTTATAAAATTCTATGGGGAGATTATAGAACTGTCAATCCAGACATTCTACTCCGCATTGGCGAGACAGAGAGAGAGAGAGTAGTGGGCGATGATGGCTAATCTTTTCATTCTCAAATTCCCAAATTTCAATTCCAGCTCAAGAATCATCTCTGCTTCAGCTTCATCGAACGGCGCTCATCCTTTATCGGCCGGCACCGGCACCGGCACCGGAGGTGGGCCTGTGATTCTGGAACTTCCTCTGGAGAAGATAAGGAGGCCATTAATGAGGACCAGATCTAACGACCCCAATAAGGTTAAAGAACTAATGGACAGTATACAACAAATTGGGCTTCAAGTTCCCATTGATGTACTTGAAGTTGATGGAATTTATTACGGTTTTTCTGGTTGTCATCGTTATGAGGCTCATCAACGCCTTGGACTTCCTACAATCCGCTGCAAAATTCGTCGTGGAACAAAAGAAACTCTGAGGCACCACATGCGTTGAAGTTTCATGAAGCTGCATTGGCAAGTTCCATCAAACTATTTATTACTTTTAATGCCCATCAAAAGCTATTACTCAATGAAACAAGCATGTGTATAATAATAACATGCAAATATTATCAATGTCAAAGTTTACATGTAAATAAACCATTACTTATAGATCCATTTCAATTTCTAAAATCTTTTCTAACTTAAACATTCAAGATAGCAATACATACAAAGCTTTGAGTTCAATTGCGAGAAATTCGAGCTTAT

Coding sequence (CDS)

ATGATGGCTAATCTTTTCATTCTCAAATTCCCAAATTTCAATTCCAGCTCAAGAATCATCTCTGCTTCAGCTTCATCGAACGGCGCTCATCCTTTATCGGCCGGCACCGGCACCGGCACCGGAGGTGGGCCTGTGATTCTGGAACTTCCTCTGGAGAAGATAAGGAGGCCATTAATGAGGACCAGATCTAACGACCCCAATAAGGTTAAAGAACTAATGGACAGTATACAACAAATTGGGCTTCAAGTTCCCATTGATGTACTTGAAGTTGATGGAATTTATTACGGTTTTTCTGGTTGTCATCGTTATGAGGCTCATCAACGCCTTGGACTTCCTACAATCCGCTGCAAAATTCGTCGTGGAACAAAAGAAACTCTGAGGCACCACATGCGTTGA

Protein sequence

MMANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMRTRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRRGTKETLRHHMR

Homology

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BLAST of Sed0015339 vs. NCBI nr
Match: XP_004145439.1 (sulfiredoxin, chloroplastic/mitochondrial [Cucumis sativus] >KGN66863.1 hypothetical protein Csa_007028 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 2.5e-57
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MMANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMR 60
           MMANLFILKFP+F+SS R +SASASSNGAHPLSAG+G G+  GP+ILELPLEKIRRPLMR
Sbjct: 1   MMANLFILKFPSFSSSLRTVSASASSNGAHPLSAGSGNGS--GPMILELPLEKIRRPLMR 60

Query: 61  TRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRR 120
           TR+NDP+KVKELMDSIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQ LGLPTIRCKIRR
Sbjct: 61  TRANDPDKVKELMDSIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQHLGLPTIRCKIRR 120

Query: 121 GTKETLRHHMR 132
           GTKETLRHH+R
Sbjct: 121 GTKETLRHHLR 129

[Close]

BLAST of Sed0015339 vs. NCBI nr
Match: XP_023519176.1 (sulfiredoxin, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.3 bits (591), Expect = 2.5e-57
Identity = 113/132 (85.61%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MMANLFILKFPNFNSSSRIISASASS-NGAHPLSAGTGTGTGGGPVILELPLEKIRRPLM 60
           MMANLF+L FP+++SS RI+SASASS NGAHPLSAG+G G+G GPVILELPLEKIRRPLM
Sbjct: 40  MMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGSGSGPVILELPLEKIRRPLM 99

Query: 61  RTRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIR 120
           RTRSN+P+K+KELM+SIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQRLGLPTIRCKIR
Sbjct: 100 RTRSNNPDKIKELMESIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKIR 159

Query: 121 RGTKETLRHHMR 132
           RGTKETLRHH+R
Sbjct: 160 RGTKETLRHHLR 171

[Close]

BLAST of Sed0015339 vs. NCBI nr
Match: XP_038895024.1 (sulfiredoxin, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-57
Identity = 113/131 (86.26%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MMANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMR 60
           +MANLFIL FP+F+SS R +SASASSNGAHPLSAG+G+G+  GP+ILELPLEKIRRPLMR
Sbjct: 21  LMANLFILNFPSFSSSLRTVSASASSNGAHPLSAGSGSGS--GPMILELPLEKIRRPLMR 80

Query: 61  TRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRR 120
           TR+NDP+KVKELMDSIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQRLGLPTIRCKIRR
Sbjct: 81  TRANDPDKVKELMDSIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKIRR 140

Query: 121 GTKETLRHHMR 132
           GTKETLRHH+R
Sbjct: 141 GTKETLRHHLR 149

[Close]

BLAST of Sed0015339 vs. NCBI nr
Match: XP_008459019.2 (PREDICTED: sulfiredoxin, chloroplastic/mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MMANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMR 60
           MMANLFILKFP+F+SS R +SASASSNGA PLSAG+G G+  GP+ILELPLEKIRRPLMR
Sbjct: 1   MMANLFILKFPSFSSSLRTVSASASSNGALPLSAGSGNGS--GPMILELPLEKIRRPLMR 60

Query: 61  TRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRR 120
           TR+NDP+KVKELMDSIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQRLGLPTIRCKIRR
Sbjct: 61  TRANDPDKVKELMDSIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKIRR 120

Query: 121 GTKETLRHHMR 132
           GTKETLRHH+R
Sbjct: 121 GTKETLRHHLR 129

[Close]

BLAST of Sed0015339 vs. NCBI nr
Match: XP_023001620.1 (sulfiredoxin, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 227.3 bits (578), Expect = 7.9e-56
Identity = 113/134 (84.33%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 1   MMANLFILKFPNFNSSSRIISASASS-NGAHPLSAGT--GTGTGGGPVILELPLEKIRRP 60
           MMANLF+L FP+++SS RI+SASASS NGAHPLSAG+  G G+G GPVILELPLEKIRRP
Sbjct: 40  MMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGGGSGSGPVILELPLEKIRRP 99

Query: 61  LMRTRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCK 120
           LMRTRSN+P+K+KELM+SIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQRLGLPTIRCK
Sbjct: 100 LMRTRSNNPDKIKELMESIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCK 159

Query: 121 IRRGTKETLRHHMR 132
           IRRGTKETLRHH+R
Sbjct: 160 IRRGTKETLRHHLR 173

[Close]

BLAST of Sed0015339 vs. ExPASy Swiss-Prot
Match: Q8GY89 (Sulfiredoxin, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SRX PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.0e-45
Identity = 96/130 (73.85%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 2   MANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMRT 61
           MANL +++ P    S R  S SASS+   P   G G+  G GP+I+ELPLEKIRRPLMRT
Sbjct: 1   MANL-MMRLP---ISLRSFSVSASSSNGSPPVIG-GSSGGVGPMIVELPLEKIRRPLMRT 60

Query: 62  RSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRRG 121
           RSND NKVKELMDSI+QIGLQVPIDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKIR+G
Sbjct: 61  RSNDQNKVKELMDSIRQIGLQVPIDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKIRKG 120

Query: 122 TKETLRHHMR 132
           TKETLRHH+R
Sbjct: 121 TKETLRHHLR 125

[Close]

BLAST of Sed0015339 vs. ExPASy Swiss-Prot
Match: Q54RQ8 (BEACH domain-containing protein lvsE OS=Dictyostelium discoideum OX=44689 GN=lvsE PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 46  ILELPLEKIRRPLMRTRSNDPNKVKELMDSIQQIGLQV-PIDVLEVDG------IYYGFS 105
           + E+P+  I RPL      D  KV  LM++I+  G+++ PIDV  V G       Y+ F 
Sbjct: 10  VTEMPMSVIHRPL--PSELDEEKVLSLMETIKS-GVEIPPIDVNWVKGKDENNNYYFSFG 69

Query: 106 GCHRYEAHQRLGLPTIRCKIRRGTKETLR 128
           GCHRYEA +RL L TIR +I + T   ++
Sbjct: 70  GCHRYEATKRLNLKTIRARIIKSTPSDIK 95

[Close]

BLAST of Sed0015339 vs. ExPASy Swiss-Prot
Match: Q9VX10 (Putative sulfiredoxin OS=Drosophila melanogaster OX=7227 GN=CG6762 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.3e-08
Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 49  LPLEKIRRPLMRTRSNDPNKVKELMDSIQQIGLQ---VPIDVLEVDG-----IYYGFSGC 108
           +P+  I+RP+      D  KV+ LM++I+    +    PID+L + G      Y+ F GC
Sbjct: 66  VPMSVIQRPIPSVL--DEQKVQSLMETIKNETSEDEVPPIDLLWISGSEGGDYYFSFGGC 125

Query: 109 HRYEAHQRLGLPTIRCKIRRGTKETLRHHM 131
           HR+EA++RL  PTI+ K+ + T   L H+M
Sbjct: 126 HRFEAYKRLQRPTIKAKLVKSTLGDLYHYM 153

[Close]

BLAST of Sed0015339 vs. ExPASy Swiss-Prot
Match: P36077 (Sulfiredoxin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SRX1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.3e-04
Identity = 32/111 (28.83%), Postives = 50/111 (45.05%), Query Frame = 0


Query: 48  ELPLEKIRRPLMRTRSNDPNKVKELMDSIQQI------------------GLQVPIDVLE 107
           E+PL +IRRPL      DP K+  ++ +++ I                  G   P+DVL 
Sbjct: 12  EIPLSEIRRPLAPVL--DPQKIDAMVATMKGIPTASKTCSLEQAEAAASAGELPPVDVLG 71

Query: 108 V----DGIYYGFSGCHRYEAHQRLGLPT------IRCKIRRGTKETLRHHM 131
           V      +YY F GCHR +A+ R    T      +RC++   T   +R ++
Sbjct: 72  VRVKGQTLYYAFGGCHRLQAYDRRARETQNAAFPVRCRVLPATPRQIRMYL 120

[Close]

BLAST of Sed0015339 vs. ExPASy TrEMBL
Match: A0A0A0LYK6 (Sulfiredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G701390 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MMANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMR 60
           MMANLFILKFP+F+SS R +SASASSNGAHPLSAG+G G+  GP+ILELPLEKIRRPLMR
Sbjct: 1   MMANLFILKFPSFSSSLRTVSASASSNGAHPLSAGSGNGS--GPMILELPLEKIRRPLMR 60

Query: 61  TRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRR 120
           TR+NDP+KVKELMDSIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQ LGLPTIRCKIRR
Sbjct: 61  TRANDPDKVKELMDSIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQHLGLPTIRCKIRR 120

Query: 121 GTKETLRHHMR 132
           GTKETLRHH+R
Sbjct: 121 GTKETLRHHLR 129

[Close]

BLAST of Sed0015339 vs. ExPASy TrEMBL
Match: A0A1S3C9S2 (Sulfiredoxin OS=Cucumis melo OX=3656 GN=LOC103498252 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.9e-57
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MMANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMR 60
           MMANLFILKFP+F+SS R +SASASSNGA PLSAG+G G+  GP+ILELPLEKIRRPLMR
Sbjct: 1   MMANLFILKFPSFSSSLRTVSASASSNGALPLSAGSGNGS--GPMILELPLEKIRRPLMR 60

Query: 61  TRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRR 120
           TR+NDP+KVKELMDSIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQRLGLPTIRCKIRR
Sbjct: 61  TRANDPDKVKELMDSIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKIRR 120

Query: 121 GTKETLRHHMR 132
           GTKETLRHH+R
Sbjct: 121 GTKETLRHHLR 129

[Close]

BLAST of Sed0015339 vs. ExPASy TrEMBL
Match: A0A6J1KLP6 (Sulfiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111495694 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.8e-56
Identity = 113/134 (84.33%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 1   MMANLFILKFPNFNSSSRIISASASS-NGAHPLSAGT--GTGTGGGPVILELPLEKIRRP 60
           MMANLF+L FP+++SS RI+SASASS NGAHPLSAG+  G G+G GPVILELPLEKIRRP
Sbjct: 40  MMANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGGGSGSGPVILELPLEKIRRP 99

Query: 61  LMRTRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCK 120
           LMRTRSN+P+K+KELM+SIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQRLGLPTIRCK
Sbjct: 100 LMRTRSNNPDKIKELMESIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCK 159

Query: 121 IRRGTKETLRHHMR 132
           IRRGTKETLRHH+R
Sbjct: 160 IRRGTKETLRHHLR 173

[Close]

BLAST of Sed0015339 vs. ExPASy TrEMBL
Match: A0A6J1CLT5 (Sulfiredoxin OS=Momordica charantia OX=3673 GN=LOC111012631 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.5e-56
Identity = 112/130 (86.15%), Postives = 123/130 (94.62%), Query Frame = 0


Query: 2   MANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMRT 61
           MANLFILK P+ +S+ R +S SASSNGAHPLSAG+G+G+  GPVILELPLEKIRRPLMRT
Sbjct: 1   MANLFILKVPSCSSALRSVSVSASSNGAHPLSAGSGSGS--GPVILELPLEKIRRPLMRT 60

Query: 62  RSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRRG 121
           R+NDPNKV+ELMDSIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQRLGLPTIRCKIRRG
Sbjct: 61  RANDPNKVQELMDSIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKIRRG 120

Query: 122 TKETLRHHMR 132
           TKETLRHHMR
Sbjct: 121 TKETLRHHMR 128

[Close]

BLAST of Sed0015339 vs. ExPASy TrEMBL
Match: A0A6J1EK79 (Sulfiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111434089 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.5e-56
Identity = 112/132 (84.85%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 2   MANLFILKFPNFNSSSRIISASASS-NGAHPLSAGT-GTGTGGGPVILELPLEKIRRPLM 61
           MANLF+L FP+++SS RI+SASASS NGAHPLSAG+ G G+G GPVILELPLEKIRRPLM
Sbjct: 41  MANLFVLNFPSYSSSFRIVSASASSTNGAHPLSAGSGGGGSGSGPVILELPLEKIRRPLM 100

Query: 62  RTRSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIR 121
           RTRSN+P+K+KELM+SIQ+IGLQVPIDVLEVDG+YYGFSGCHRYEAHQRLGLPTIRCKIR
Sbjct: 101 RTRSNNPDKIKELMESIQEIGLQVPIDVLEVDGVYYGFSGCHRYEAHQRLGLPTIRCKIR 160

Query: 122 RGTKETLRHHMR 132
           RGTKETLRHH+R
Sbjct: 161 RGTKETLRHHLR 172

[Close]

BLAST of Sed0015339 vs. TAIR 10
Match: AT1G31170.1 (sulfiredoxin )

HSP 1 Score: 181.8 bits (460), Expect = 3.6e-46
Identity = 96/130 (73.85%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 2   MANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMRT 61
           MANL +++ P    S R  S SASS+   P   G G+  G GP+I+ELPLEKIRRPLMRT
Sbjct: 1   MANL-MMRLP---ISLRSFSVSASSSNGSPPVIG-GSSGGVGPMIVELPLEKIRRPLMRT 60

Query: 62  RSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRRG 121
           RSND NKVKELMDSI+QIGLQVPIDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKIR+G
Sbjct: 61  RSNDQNKVKELMDSIRQIGLQVPIDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKIRKG 120

Query: 122 TKETLRHHMR 132
           TKETLRHH+R
Sbjct: 121 TKETLRHHLR 125

[Close]

BLAST of Sed0015339 vs. TAIR 10
Match: AT1G31170.2 (sulfiredoxin )

HSP 1 Score: 181.8 bits (460), Expect = 3.6e-46
Identity = 96/130 (73.85%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 2   MANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMRT 61
           MANL +++ P    S R  S SASS+   P   G G+  G GP+I+ELPLEKIRRPLMRT
Sbjct: 1   MANL-MMRLP---ISLRSFSVSASSSNGSPPVIG-GSSGGVGPMIVELPLEKIRRPLMRT 60

Query: 62  RSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRRG 121
           RSND NKVKELMDSI+QIGLQVPIDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKIR+G
Sbjct: 61  RSNDQNKVKELMDSIRQIGLQVPIDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKIRKG 120

Query: 122 TKETLRHHMR 132
           TKETLRHH+R
Sbjct: 121 TKETLRHHLR 125

[Close]

BLAST of Sed0015339 vs. TAIR 10
Match: AT1G31170.4 (sulfiredoxin )

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-43
Identity = 93/126 (73.81%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 2   MANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMRT 61
           MANL +++ P    S R  S SASS+   P   G G+  G GP+I+ELPLEKIRRPLMRT
Sbjct: 1   MANL-MMRLP---ISLRSFSVSASSSNGSPPVIG-GSSGGVGPMIVELPLEKIRRPLMRT 60

Query: 62  RSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRRG 121
           RSND NKVKELMDSI+QIGLQVPIDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKIR+G
Sbjct: 61  RSNDQNKVKELMDSIRQIGLQVPIDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKIRKG 120

Query: 122 TKETLR 128
           TKETLR
Sbjct: 121 TKETLR 121

[Close]

BLAST of Sed0015339 vs. TAIR 10
Match: AT1G31170.3 (sulfiredoxin )

HSP 1 Score: 172.6 bits (436), Expect = 2.2e-43
Identity = 94/130 (72.31%), Postives = 106/130 (81.54%), Query Frame = 0


Query: 2   MANLFILKFPNFNSSSRIISASASSNGAHPLSAGTGTGTGGGPVILELPLEKIRRPLMRT 61
           MANL +++ P    S R  S SASS+   P   G G+  G GP+I+ELPLEKIRRPLMRT
Sbjct: 1   MANL-MMRLP---ISLRSFSVSASSSNGSPPVIG-GSSGGVGPMIVELPLEKIRRPLMRT 60

Query: 62  RSNDPNKVKELMDSIQQIGLQVPIDVLEVDGIYYGFSGCHRYEAHQRLGLPTIRCKIRRG 121
           RSND NKVKELMDSI+QIGLQ  IDV+EVDG YYGFSGCHRYEAHQ+LGLPTIRCKIR+G
Sbjct: 61  RSNDQNKVKELMDSIRQIGLQ--IDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKIRKG 120

Query: 122 TKETLRHHMR 132
           TKETLRHH+R
Sbjct: 121 TKETLRHHLR 123

The following BLAST results are available for this feature:

BLAST of Sed0015339 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145439.1	2.5e-57	87.02	sulfiredoxin, chloroplastic/mitochondrial [Cucumis sativus] >KGN66863.1 hypothet...	[more]
XP_023519176.1	2.5e-57	85.61	sulfiredoxin, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_038895024.1	4.2e-57	86.26	sulfiredoxin, chloroplastic/mitochondrial [Benincasa hispida]	[more]
XP_008459019.2	1.2e-56	87.02	PREDICTED: sulfiredoxin, chloroplastic/mitochondrial isoform X2 [Cucumis melo]	[more]
XP_023001620.1	7.9e-56	84.33	sulfiredoxin, chloroplastic/mitochondrial-like [Cucurbita maxima]	[more]

BLAST of Sed0015339 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GY89	5.0e-45	73.85	Sulfiredoxin, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SRX...	[more]
Q54RQ8	2.9e-08	40.45	BEACH domain-containing protein lvsE OS=Dictyostelium discoideum OX=44689 GN=lvs...	[more]
Q9VX10	8.3e-08	36.67	Putative sulfiredoxin OS=Drosophila melanogaster OX=7227 GN=CG6762 PE=2 SV=1	[more]
P36077	3.3e-04	28.83	Sulfiredoxin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]

BLAST of Sed0015339 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYK6	1.2e-57	87.02	Sulfiredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G701390 PE=3 SV=1	[more]
A0A1S3C9S2	5.9e-57	87.02	Sulfiredoxin OS=Cucumis melo OX=3656 GN=LOC103498252 PE=3 SV=1	[more]
A0A6J1KLP6	3.8e-56	84.33	Sulfiredoxin OS=Cucurbita maxima OX=3661 GN=LOC111495694 PE=3 SV=1	[more]
A0A6J1CLT5	6.5e-56	86.15	Sulfiredoxin OS=Momordica charantia OX=3673 GN=LOC111012631 PE=3 SV=1	[more]
A0A6J1EK79	8.5e-56	84.85	Sulfiredoxin OS=Cucurbita moschata OX=3662 GN=LOC111434089 PE=3 SV=1	[more]

BLAST of Sed0015339 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31170.1	3.6e-46	73.85	sulfiredoxin	[more]
AT1G31170.2	3.6e-46	73.85	sulfiredoxin	[more]
AT1G31170.4	1.3e-43	73.81	sulfiredoxin	[more]
AT1G31170.3	2.2e-43	72.31	sulfiredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1530.10		coord: 44..90 e-value: 2.9E-6 score: 29.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..44
IPR016692	Sulfiredoxin	PANTHER	PTHR21348	UNCHARACTERIZED	coord: 15..86
IPR036086	ParB/Sulfiredoxin superfamily	SUPERFAMILY	110849	ParB/Sulfiredoxin	coord: 41..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015339.1	Sed0015339.1	mRNA
Sed0015339.2	Sed0015339.2	mRNA
Sed0015339.3	Sed0015339.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0032542	sulfiredoxin activity