Sed0015311 (gene) Chayote v1

Overview


Name	Sed0015311
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc-finger homeodomain protein 9-like
Location	LG08: 39388463 .. 39389295 (+)
RNA-Seq Expression	Sed0015311
Synteny	Sed0015311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACACACTCAAACAAACAAAACCAAAACTTACACACACAGAAACAAAGATCAGATCGAGAGAAAAAAAAGAATGGATGGAGAAAACTCAAACTACCATTACAGAGAATGCCTTCGGAACCACGCCGCCAGTCTCGGCAGCTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGCTGCAGGCAACCTCCTCAACTGCGCCGCGTGCGGCTGCCACCGCAACTTCCACCGTAAAGTCACCTACATCGTCGGTGGCGCCCGCGACGACCTCGTGACGGACTACGACCGTCATGCTGTCGTCGACTACGCTGCCCCCGACGACACCGACCGCAGCGGTGGCAAAAAGCGGTTTCGTACAAAATTCACGGCGGATCAGAGGGAAAAGATGCTGGCATTTGCTGAGAAGTTAGGGTGGAAGCTACAGCGGAGAGATCTCGACGACGAGATCGAGCGATTCTGCCGGAGCGTGGGCGTCACGCGCCACGTGTTCAAGGTTTGGATGCACAATCATAAGAATTCTTTTTCTTCAAATTCTGCTGCGTCCACTGGAAATGCCTCTTCCCTAACGCACCAAGATTGATTGATTAAGGTTGATTAATCAATTAATTAATCAGTAGAAATTAGAGAGGCCTAATTGATTTCCCCTTTCAGATCCCTTTTTTATTCTTGCTAAAAAGGGTCTAGTTTATATATCACTATAATATCTCTATCTCCCTTTTTGTTGTATTGTATAAAACTAATTTTCTTTTAAGGACAAAAAAAAGGTATGCTTTTTATTTCCTCCAATTTTTCATGAAAATTGACATTCACTCATGCATTGAGAACAGAAGAC

mRNA sequence

TACACACTCAAACAAACAAAACCAAAACTTACACACACAGAAACAAAGATCAGATCGAGAGAAAAAAAAGAATGGATGGAGAAAACTCAAACTACCATTACAGAGAATGCCTTCGGAACCACGCCGCCAGTCTCGGCAGCTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGCTGCAGGCAACCTCCTCAACTGCGCCGCGTGCGGCTGCCACCGCAACTTCCACCGTAAAGTCACCTACATCGTCGGTGGCGCCCGCGACGACCTCGTGACGGACTACGACCGTCATGCTGTCGTCGACTACGCTGCCCCCGACGACACCGACCGCAGCGGTGGCAAAAAGCGGTTTCGTACAAAATTCACGGCGGATCAGAGGGAAAAGATGCTGGCATTTGCTGAGAAGTTAGGGTGGAAGCTACAGCGGAGAGATCTCGACGACGAGATCGAGCGATTCTGCCGGAGCGTGGGCGTCACGCGCCACGTGTTCAAGGTTTGGATGCACAATCATAAGAATTCTTTTTCTTCAAATTCTGCTGCGTCCACTGGAAATGCCTCTTCCCTAACGCACCAAGATTGATTGATTAAGGTTGATTAATCAATTAATTAATCAGTAGAAATTAGAGAGGCCTAATTGATTTCCCCTTTCAGATCCCTTTTTTATTCTTGCTAAAAAGGGTCTAGTTTATATATCACTATAATATCTCTATCTCCCTTTTTGTTGTATTGTATAAAACTAATTTTCTTTTAAGGACAAAAAAAAGGTATGCTTTTTATTTCCTCCAATTTTTCATGAAAATTGACATTCACTCATGCATTGAGAACAGAAGAC

Coding sequence (CDS)

ATGGATGGAGAAAACTCAAACTACCATTACAGAGAATGCCTTCGGAACCACGCCGCCAGTCTCGGCAGCTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGCTGCAGGCAACCTCCTCAACTGCGCCGCGTGCGGCTGCCACCGCAACTTCCACCGTAAAGTCACCTACATCGTCGGTGGCGCCCGCGACGACCTCGTGACGGACTACGACCGTCATGCTGTCGTCGACTACGCTGCCCCCGACGACACCGACCGCAGCGGTGGCAAAAAGCGGTTTCGTACAAAATTCACGGCGGATCAGAGGGAAAAGATGCTGGCATTTGCTGAGAAGTTAGGGTGGAAGCTACAGCGGAGAGATCTCGACGACGAGATCGAGCGATTCTGCCGGAGCGTGGGCGTCACGCGCCACGTGTTCAAGGTTTGGATGCACAATCATAAGAATTCTTTTTCTTCAAATTCTGCTGCGTCCACTGGAAATGCCTCTTCCCTAACGCACCAAGATTGA

Protein sequence

MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDAAGNLLNCAACGCHRNFHRKVTYIVGGARDDLVTDYDRHAVVDYAAPDDTDRSGGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLTHQD

Homology

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BLAST of Sed0015311 vs. NCBI nr
Match: XP_004137520.1 (zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical protein Csa_014376 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 149/178 (83.71%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD   +  NLL+CAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIVGGAR-------DDLVTDYDRHAVVDYAAPDDTDRSGG--KKRFRTKFTADQREKMLA 120
           YI GG R       DD + DYDRHAVV+YAA  DT+RSGG  KKRFRTKFTADQ+EKMLA
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAA-DTERSGGGSKKRFRTKFTADQKEKMLA 120

Query: 121 FAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           FAEKLGWKLQR+DLDDEIERFCRSVGVTR VFKVWMHNHKNSFSSNS ASTGNASSLT
Sbjct: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNS-ASTGNASSLT 176

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BLAST of Sed0015311 vs. NCBI nr
Match: XP_038895089.1 (zinc-finger homeodomain protein 9-like [Benincasa hispida])

HSP 1 Score: 285.0 bits (728), Expect = 4.1e-73
Identity = 149/180 (82.78%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDAA---GNLLNCAACGCHRNFHRKVT 60
           M+GENSNYHYRECLRNHAASLGSYATDGCGEFTLD A    NLL+CAACGCHRNFHRKVT
Sbjct: 1   MEGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIVGGAR-------DDLVTDYDRHAVVDYAAPDDTDRSGG----KKRFRTKFTADQREKM 120
           YI GG R       DD + DYDRHAVV+YAA  DT+RSGG    KKRFRTKFTADQ+EKM
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAA-DTERSGGGGGSKKRFRTKFTADQKEKM 120

Query: 121 LAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           LAFAEKLGWKLQR+DLDDEIERFCRSVGVTR VFKVWMHNHKNSFSSNS ASTGNASSLT
Sbjct: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNS-ASTGNASSLT 178

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BLAST of Sed0015311 vs. NCBI nr
Match: XP_008467173.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 148/180 (82.22%), Postives = 155/180 (86.11%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD   +  NLL+CAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIVGG--------ARDDLVTDYDRHAVVDYAAPDDTDRSGG---KKRFRTKFTADQREKM 120
           YI GG        A DD + DYDRHAVV+YAA  DT+RSGG   KKRFRTKFT DQ+EKM
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAA-DTERSGGGGSKKRFRTKFTVDQKEKM 120

Query: 121 LAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           LAFAEKLGWKLQR+DLDDEIERFCRSVGVTR VFKVWMHNHKNSFSSNS ASTGNASSLT
Sbjct: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNS-ASTGNASSLT 178

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BLAST of Sed0015311 vs. NCBI nr
Match: XP_022137470.1 (zinc-finger homeodomain protein 10-like [Momordica charantia])

HSP 1 Score: 269.6 bits (688), Expect = 1.8e-68
Identity = 139/173 (80.35%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDAAG---NLLNCAACGCHRNFHRKVT 60
           M+GENSNYHYRECLRNHAASLGSYATDGCGEFTLD A    N L+CAACGCHRNFHRK+T
Sbjct: 1   MEGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLT 60

Query: 61  YIV---GGARDD-LVTDYDRHAVVDYAAPDDTDRSGGKKRFRTKFTADQREKMLAFAEKL 120
           YIV     A DD L  DYDRHAVV+Y+   DT    GKKRFRTKFT DQ++KMLAFAEKL
Sbjct: 61  YIVAPRASASDDALNIDYDRHAVVEYSPAADT----GKKRFRTKFTPDQKDKMLAFAEKL 120

Query: 121 GWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           GWKLQR+DLDDEIERFCRSVGVTR VFKVWMHNHKN+FSS SAASTGNASSLT
Sbjct: 121 GWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAASTGNASSLT 169

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BLAST of Sed0015311 vs. NCBI nr
Match: XP_022924045.1 (zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc-finger homeodomain protein 8-like [Cucurbita maxima] >XP_023519958.1 zinc-finger homeodomain protein 8-like [Cucurbita pepo subsp. pepo] >KAG6584298.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019891.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 140/172 (81.40%), Postives = 146/172 (84.88%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD   +  N L+C ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIVGGARDDLVTDYDRHAVVDY-AAPDDTDRS--GGKKRFRTKFTADQREKMLAFAEKLG 120
           YI GG R    T  D   ++DY  A  DT+RS  GGKKRFRTKFTADQREKMLAFAEKLG
Sbjct: 61  YIAGGGRSSAATADD---LMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLG 120

Query: 121 WKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           WKLQRRDLDDEIERFCRSVGVTR VFKVWMHNHKNSFSSNS ASTGNASSLT
Sbjct: 121 WKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNS-ASTGNASSLT 168

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BLAST of Sed0015311 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-35
Identity = 88/179 (49.16%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEF-------TLDAAGNLLNCAACGCHRNFHRK 62
           G  +   YRECL+NHA ++G +A DGC EF       TLDA    L CAACGCHRNFHRK
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDA----LKCAACGCHRNFHRK 101

Query: 63  VTYIVGGARDDLVTDYDR----HAVVDY------AAP--------DDTDRS------GGK 122
            T  +GG    + T Y+R    H    Y      AAP        D+ D S      G  
Sbjct: 102 ETESIGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTT 161

Query: 123 KRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNS 151
           KRFRTKFTA+Q+EKMLAFAE+LGW++Q+ D D  +E+FC   GV R V K+WMHN+KNS
Sbjct: 162 KRFRTKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

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BLAST of Sed0015311 vs. ExPASy Swiss-Prot
Match: A2XLF4 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.8e-32
Identity = 85/184 (46.20%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRK------VTYIV 69
           YREC+RNHAA LG+YA DGC E+T D    AG  L CAACGCHRNFHRK       T   
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDDGHPAG--LLCAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGARDDLV--------------TDYDRHAVVDYA-----APDDTDRSGGKKRFRTKFTAD 129
           GGA    V                Y   A +  A       D    SGG++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QREKMLAFAEKLGWKLQRRDL-----DDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSA 161
           Q+ +ML FAE+LGW++ +R+      DDE+ RFCR +GV R VFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]

BLAST of Sed0015311 vs. ExPASy Swiss-Prot
Match: Q10DV5 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.8e-32
Identity = 85/184 (46.20%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRK------VTYIV 69
           YREC+RNHAA LG+YA DGC E+T D    AG  L CAACGCHRNFHRK       T   
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDDGHPAG--LLCAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GGARDDLV--------------TDYDRHAVVDYA-----APDDTDRSGGKKRFRTKFTAD 129
           GGA    V                Y   A +  A       D    SGG++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QREKMLAFAEKLGWKLQRRDL-----DDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSA 161
           Q+ +ML FAE+LGW++ +R+      DDE+ RFCR +GV R VFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]

BLAST of Sed0015311 vs. ExPASy Swiss-Prot
Match: Q2QW44 (Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD3 PE=3 SV=3)

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-29
Identity = 79/185 (42.70%), Postives = 104/185 (56.22%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEF-------TLDAAGNLLNCAACGCHRNFHRKVT----- 69
           YRECL+NHAA++G  ATDGCGEF       +LDA    L C+ACGCHRNFHRK       
Sbjct: 74  YRECLKNHAAAIGGSATDGCGEFMPGGEEGSLDA----LRCSACGCHRNFHRKELDAAAA 133

Query: 70  --------YIVG-GARDDLVTDYDRHAVVDYAAP-----------------DDTDRSGG- 129
                    ++G GA       +  H +V    P                 D   R GG 
Sbjct: 134 PPLHHHHHQLLGVGAHPRGHGHHHHHLLVAALPPPTRMVMPLSAMHTSESDDAAARPGGG 193

Query: 130 ---KKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNH 153
              +KRFRTKFTA+Q+ +ML FAE++GW+LQ+ + D  ++RFC+ VGV R V KVWMHN+
Sbjct: 194 AAARKRFRTKFTAEQKARMLGFAEEVGWRLQKLE-DAVVQRFCQEVGVKRRVLKVWMHNN 253

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BLAST of Sed0015311 vs. ExPASy Swiss-Prot
Match: Q7X7N3 (Zinc-finger homeodomain protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD8 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.5e-29
Identity = 79/218 (36.24%), Postives = 106/218 (48.62%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDAAGNLLNCAACGCHRNFHRKVTYIVGGA------ 69
           Y+EC+RNHAA++G  A DGCGE+ + A+ + L CAACGCHR+FHR+    +GG       
Sbjct: 23  YKECMRNHAAAMGGQAFDGCGEY-MPASPDSLKCAACGCHRSFHRRAAAGIGGGPVFFRP 82

Query: 70  --------------------------RDDLVTDYDRHAV--------------------- 129
                                        L   Y  HAV                     
Sbjct: 83  PPPPQPHSHHAALQGFLPSSVPAPAPPPQLALPY--HAVPAAAWHHAAAAAAGRAGSETP 142

Query: 130 --VDYAAPDDTDRSG-------GKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIE 166
             +D   P     SG       G+KRFRTKFT +Q+E+M  FAEK GW++ R D D  ++
Sbjct: 143 PRMDDFGPGSAGGSGSGGGGIFGRKRFRTKFTPEQKERMREFAEKQGWRINRND-DGALD 202

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BLAST of Sed0015311 vs. ExPASy TrEMBL
Match: A0A0A0LQK4 (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.9e-74
Identity = 149/178 (83.71%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD   +  NLL+CAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIVGGAR-------DDLVTDYDRHAVVDYAAPDDTDRSGG--KKRFRTKFTADQREKMLA 120
           YI GG R       DD + DYDRHAVV+YAA  DT+RSGG  KKRFRTKFTADQ+EKMLA
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAA-DTERSGGGSKKRFRTKFTADQKEKMLA 120

Query: 121 FAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           FAEKLGWKLQR+DLDDEIERFCRSVGVTR VFKVWMHNHKNSFSSNS ASTGNASSLT
Sbjct: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNS-ASTGNASSLT 176

[Close]

BLAST of Sed0015311 vs. ExPASy TrEMBL
Match: A0A1S3CU70 (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.8e-73
Identity = 148/180 (82.22%), Postives = 155/180 (86.11%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD   +  NLL+CAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIVGG--------ARDDLVTDYDRHAVVDYAAPDDTDRSGG---KKRFRTKFTADQREKM 120
           YI GG        A DD + DYDRHAVV+YAA  DT+RSGG   KKRFRTKFT DQ+EKM
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAA-DTERSGGGGSKKRFRTKFTVDQKEKM 120

Query: 121 LAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           LAFAEKLGWKLQR+DLDDEIERFCRSVGVTR VFKVWMHNHKNSFSSNS ASTGNASSLT
Sbjct: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNS-ASTGNASSLT 178

[Close]

BLAST of Sed0015311 vs. ExPASy TrEMBL
Match: A0A6J1C6R0 (zinc-finger homeodomain protein 10-like OS=Momordica charantia OX=3673 GN=LOC111008907 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.7e-69
Identity = 139/173 (80.35%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDAAG---NLLNCAACGCHRNFHRKVT 60
           M+GENSNYHYRECLRNHAASLGSYATDGCGEFTLD A    N L+CAACGCHRNFHRK+T
Sbjct: 1   MEGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLT 60

Query: 61  YIV---GGARDD-LVTDYDRHAVVDYAAPDDTDRSGGKKRFRTKFTADQREKMLAFAEKL 120
           YIV     A DD L  DYDRHAVV+Y+   DT    GKKRFRTKFT DQ++KMLAFAEKL
Sbjct: 61  YIVAPRASASDDALNIDYDRHAVVEYSPAADT----GKKRFRTKFTPDQKDKMLAFAEKL 120

Query: 121 GWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           GWKLQR+DLDDEIERFCRSVGVTR VFKVWMHNHKN+FSS SAASTGNASSLT
Sbjct: 121 GWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAASTGNASSLT 169

[Close]

BLAST of Sed0015311 vs. ExPASy TrEMBL
Match: A0A6J1KHP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111495841 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.4e-68
Identity = 140/172 (81.40%), Postives = 146/172 (84.88%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD   +  N L+C ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIVGGARDDLVTDYDRHAVVDY-AAPDDTDRS--GGKKRFRTKFTADQREKMLAFAEKLG 120
           YI GG R    T  D   ++DY  A  DT+RS  GGKKRFRTKFTADQREKMLAFAEKLG
Sbjct: 61  YIAGGGRSSAATADD---LMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLG 120

Query: 121 WKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           WKLQRRDLDDEIERFCRSVGVTR VFKVWMHNHKNSFSSNS ASTGNASSLT
Sbjct: 121 WKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNS-ASTGNASSLT 168

[Close]

BLAST of Sed0015311 vs. ExPASy TrEMBL
Match: A0A6J1EDP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111431593 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.4e-68
Identity = 140/172 (81.40%), Postives = 146/172 (84.88%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD---AAGNLLNCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLD   +  N L+C ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIVGGARDDLVTDYDRHAVVDY-AAPDDTDRS--GGKKRFRTKFTADQREKMLAFAEKLG 120
           YI GG R    T  D   ++DY  A  DT+RS  GGKKRFRTKFTADQREKMLAFAEKLG
Sbjct: 61  YIAGGGRSSAATADD---LMDYDQAATDTERSGGGGKKRFRTKFTADQREKMLAFAEKLG 120

Query: 121 WKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNSFSSNSAASTGNASSLT 167
           WKLQRRDLDDEIERFCRSVGVTR VFKVWMHNHKNSFSSNS ASTGNASSLT
Sbjct: 121 WKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNS-ASTGNASSLT 168

[Close]

BLAST of Sed0015311 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 88/179 (49.16%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEF-------TLDAAGNLLNCAACGCHRNFHRK 62
           G  +   YRECL+NHA ++G +A DGC EF       TLDA    L CAACGCHRNFHRK
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDA----LKCAACGCHRNFHRK 101

Query: 63  VTYIVGGARDDLVTDYDR----HAVVDY------AAP--------DDTDRS------GGK 122
            T  +GG    + T Y+R    H    Y      AAP        D+ D S      G  
Sbjct: 102 ETESIGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTT 161

Query: 123 KRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNHKNS 151
           KRFRTKFTA+Q+EKMLAFAE+LGW++Q+ D D  +E+FC   GV R V K+WMHN+KNS
Sbjct: 162 KRFRTKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]

BLAST of Sed0015311 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 74/214 (34.58%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 5   NSNYHYRECLRNHAASLGSYATDGCGEF-----TLDAAGNLLNCAACGCHRNFHRKVT-- 64
           N+   Y+ECL+NHAA++G +A DGCGEF     +  +    L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 65  -------YIVGGARDDLVTDYDRH------------------------------------ 124
                   ++  +      +Y  H                                    
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 125 -------AVVDYAAPDD--TDRSGGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDE 160
                  + +++AA  +  +   G +KRFRTKF+++Q+EKM  FA+++GWK+Q+RD +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

[Close]

BLAST of Sed0015311 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 73/187 (39.04%), Postives = 100/187 (53.48%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFT---LDAAGNLLNCAACGCHRNFHRKVTYI 62
           G  S + +RECL+N A ++G +A DGCGEF    ++   + L CAACGCHRNFHRK    
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  VGGARDDLVTD------YDRHAVVDYAAP-------------------------DDTDRS 122
              A             Y   A V Y  P                            +  
Sbjct: 128 FHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAG 187

Query: 123 GG-KKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVFKVWMHNH 155
           GG +KR RTKFTA+Q+E+MLA AE++GW++QR+D D+ I+RFC+  GV R V KVW+HN+
Sbjct: 188 GGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNN 247

[Close]

BLAST of Sed0015311 vs. TAIR 10
Match: AT1G14440.1 (homeobox protein 31 )

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 76/195 (38.97%), Postives = 100/195 (51.28%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFT---LDAAGNLLNCAACGCHRNFHRKVTYIVGGARDD 69
           Y+ECL+NHAA++G  ATDGCGEF     D +   L C+AC CHRNFHRK   + G     
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRK--EVEGELAAT 149

Query: 70  LVTDYDRH-------------------------AVVDYAAPDDTDRS------------- 129
            ++ Y +H                          V +Y    +   S             
Sbjct: 150 AMSPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTAS 209

Query: 130 --------GGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVF 156
                     KKRFRTKFT +Q+EKML+FAEK+GWK+QR++ D  ++RFC  +GV R V 
Sbjct: 210 RSLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVL 269

[Close]

BLAST of Sed0015311 vs. TAIR 10
Match: AT1G14440.2 (homeobox protein 31 )

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 76/195 (38.97%), Postives = 100/195 (51.28%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFT---LDAAGNLLNCAACGCHRNFHRKVTYIVGGARDD 69
           Y+ECL+NHAA++G  ATDGCGEF     D +   L C+AC CHRNFHRK   + G     
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRK--EVEGELAAT 149

Query: 70  LVTDYDRH-------------------------AVVDYAAPDDTDRS------------- 129
            ++ Y +H                          V +Y    +   S             
Sbjct: 150 AMSPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTAS 209

Query: 130 --------GGKKRFRTKFTADQREKMLAFAEKLGWKLQRRDLDDEIERFCRSVGVTRHVF 156
                     KKRFRTKFT +Q+EKML+FAEK+GWK+QR++ D  ++RFC  +GV R V 
Sbjct: 210 RSLPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVL 269

The following BLAST results are available for this feature:

BLAST of Sed0015311 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137520.1	1.4e-73	83.71	zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical pro...	[more]
XP_038895089.1	4.1e-73	82.78	zinc-finger homeodomain protein 9-like [Benincasa hispida]	[more]
XP_008467173.1	1.2e-72	82.22	PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo]	[more]
XP_022137470.1	1.8e-68	80.35	zinc-finger homeodomain protein 10-like [Momordica charantia]	[more]
XP_022924045.1	1.5e-67	81.40	zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc...	[more]

BLAST of Sed0015311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB61	1.6e-35	49.16	Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
A2XLF4	4.8e-32	46.20	Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD...	[more]
Q10DV5	4.8e-32	46.20	Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Z...	[more]
Q2QW44	5.0e-29	42.70	Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]
Q7X7N3	6.5e-29	36.24	Zinc-finger homeodomain protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]

BLAST of Sed0015311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQK4	6.9e-74	83.71	Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G0430...	[more]
A0A1S3CU70	5.8e-73	82.22	zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 P...	[more]
A0A6J1C6R0	8.7e-69	80.35	zinc-finger homeodomain protein 10-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KHP1	7.4e-68	81.40	zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC1114958...	[more]
A0A6J1EDP1	7.4e-68	81.40	zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of Sed0015311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24660.1	1.1e-36	49.16	homeobox protein 22	[more]
AT3G28920.1	1.3e-29	34.58	homeobox protein 34	[more]
AT5G65410.1	1.3e-29	39.04	homeobox protein 25	[more]
AT1G14440.1	1.8e-29	38.97	homeobox protein 31	[more]
AT1G14440.2	1.8e-29	38.97	homeobox protein 31	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 8..57 e-value: 2.8E-22 score: 78.8
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 9..55 e-value: 1.4E-21 score: 74.6
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 10..56 score: 22.427622
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 91..149 e-value: 2.1E-28 score: 96.0
None	No IPR available	GENE3D	1.10.10.60		coord: 78..155 e-value: 1.0E-33 score: 117.0
None	No IPR available	PANTHER	PTHR31948:SF16	ZINC-FINGER HOMEODOMAIN PROTEIN 11	coord: 5..157
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 5..157
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 82..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015311.1	Sed0015311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding