Sed0015290 (gene) Chayote v1

Overview


Name	Sed0015290
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	LG01: 17929741 .. 17937590 (-)
RNA-Seq Expression	Sed0015290
Synteny	Sed0015290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGGCCTTAGCTTGTGGTTGATGGGTTGTGGCTCGAAGAAACTTTCTCAAATAGGAAAGAGCAATATCAGTCCACACAGCCAAGCAATAAAATGAAGCAGTGTGTGTGAGATAAGGTTGATGCGTTGTGGCTCCAATGGCGACCTTTCAGTTTGAGCCACAAGCTTCTCCATCTTCCTCATTCCTCGGGAGCTCTCTTCTTCCACAGCTTCGTAGTCCGACCCCCACAACCCTTCATCTTCGGAACACCCACTCCATCCCTCGTCGTCCGATCTGCACAGCTTCTTGGCAGGAGGTTTGTTGTACAACAACAACAACAACAACAGCAATCTATGCTATTATCTCTGATTGCTTACTCTTCTTCGTTTTGCTTTAGCTTGCCGGGGTTCTCGTTTTCTCCGCAATTCCCTTCACCGCTGTCAAAGCCGTCGCCAACAGCCCACTCGGGGCGTCGCTCCAGAGGCAATTGCAGAAGAAAAAAAACGCTGCCATCGCCAATTCTTCCACCTTCAACGCTCTTGCCGCCCAGGCTAGAAAACGCAGGTAATCCCTCTTCTAACACATCCTCTACATTTTCTGTTCCAACTGCTCACTCATTTCCGCCCTTGTAAACTGTTCTAAGTGTTGGCTTCGTAATAAAGAACCCGAATATTGTAGTCCGTAGTCATATACACGATGATTCGTTATTGATCTGGTTAGATTTATTATATTCAGTGTTTCAAAAATCATTTGAGGCGAGGCGGGGCAGAGAGAAAATGCCTCGAGGCTTAAGCCTCGCAAGGGAAAATTGTAGCGGCCGCCTCATAAGAGAAAGGCGTACACCTCTCCATCAAATTGCCTTTTGTTTTCAAATTATGGCTGAAAGTTTAAATTAAATGTAAAATCTTTTTATCCAGACAGTGGACCATTCAAATAGGCCCATATTACATTTTAAAAATTATTTATTGGTTGACCTAAAAGTAAAGTGACTTATAACCGAAGACAAAAGGTCAAAAAAAATATTTGATATGATGACTACTCTATCGATGATCCCATTAGTAATAGTGAAAATGATAATGATTTTTTGGATGATCTTTAGAACACAATATGGATCAACTGGTTAGATTTTTTTATAGCAACATTTATATTGAGTTTTTTGTGTAGTTTTAAGGAGTATTACCTAATTTAAATACAAAATGTTTTATCTTTTTTTATTAAAATATGTTTCTTTAAATTTTTAAATGAGGCTTATGCCTCATTACACCTCGAGACTTAAGTCTCGCCTCTTCCAAAGAAAACGCCTCGAGGCCGCCTCACGCCTTTTAAAACATTTGATTATATTTAGTATTTAGTTGTTATAATATTTAGTTTACTTACGTATTTCATTGTATAAATATTCATATAAATAAAATGTCTAGTTTCTACTCTTCCAAATTAATGCTCTTTGGTCTGGGTGGCCATCCAACGTACATGCAAGAAGAGGAGCTTAGTTGTCATAGCTTGAGTAGAGCAGAAAGAAGAGCTGAGAAGCCATTAACGGAGGTTGAAAGAAAATATAGAAAGTGTATAATTGAGGAAGACGAAGTTGAAGGCTATATTGTACCAACTCACACATTACAACCTAATAATTAACTATATATAGAAAAAGACATTCTAACCAAATGGGCCCAATGAGCCTTTATACACTAATATTGACAACAACCTAACTAACATTAATACTACTAATGCTATTCTAATCTATACTAATCTAACCATTGTATTAATACTCTAACATAGCCTAAATGACAAAAGGGTGATTCAAAGTGTCCATACATCAATTTGTCGGGGGTTTAAATTCTGCTGGTTGTCTAAAGTTGGGGCATAACATAGTGCCCCCAAAAGTCTTCTTTGCTAAAGAAACATGCAAGATAGTGCCCCTTCTAAAGTTTTGGTGACTCGCCTCATGAATGGCCAACATGATTGACGATGAGATGTGGGTCTTCTCCACACACTTCTCCCTCCTGACGTGATGAGTCTTGATCTTATCCAATATTTTAAAAAGTGCAAGGTGCACTAAGGCGCAATGGCCCTATGGAGCCTGAGGCGCAAGGCTCACCAAAAGGCGAGGGATTTTTTACCTAAGACACACTATATAAAAAAACACAAAAAATATATATGCGTGTGTGTGTATACACAATAAAACATTTCCATAGATATAAATGAAGTTTTAACCAAGAATCATATATAAAACATACATTACATTTAACTATTAACCTTCATTCATGAATAGAAATGAAGTTTAACAAAGAATCTATATAAAACATACATAAGATTCAACTATTAACCTTTCATTTTAAGCGAATGTTGTCTTTGTGCGTTAAAAAATTAAGTTATTTAAGGCATTGAAATGTCTTGAATCAATTACGTCGCGCTTCGAATGACTAGTAGGGACTCTAAAACACAAAAAATTGAGGTAAAACCCTAAAAAACCCTAAGAAAACACAAAAGCCCACAAGGCACGCGCCTTTTGGTACCCAAGGCTTCATGTAAGGCGCCAAAAGGCACGCGCCTAATTAACCGCGCCTCGCTTTTCCCAAGCGAGGCGAAAGGTTCGACTTATGCCAAGGCGCACCTTTTAAAACACTGCATGTGAGTACATTTAGTGCAATTGATTCATGAGATAATCTTTGGGTGCGCAAGCCCTCCCCACTTAGGCATAAGTTGGATGTTCAACTTCCCGAGAGCTACAAAACAAGTTTTTCATATTTTCTCCATGTAAAAAAAAAAAGCCTAAGAACTTGACCTTCTCCTCAGTAACATTATTATTTTATCTAGGAATATTTTTTTTGTTTCCCATCTTTTTTTGGAAAGAAACTGCATTATAGGTATGAAATTAGAGGCAAATAGCCAATTACAAAAGAGAACTCTAGTTATTCAAAGAGTGTCACGGAAGAGAGGAGATTGTTTACACCAAGAAACAACAACAATAGTAATATTTTCAATAAATTTGAAAAGGTTCGTGTATGTTCCCTTTCCGGTTGTTCCTTTCTCTCCACAAATGCCAGCAAAATGCTCGGACAAAGTTGTCCCAGAGCAGCTTCTTTTTGTCTTTAAATGGATGACCAGAAGACTAGTGTCTAGGAGAGAGTGAGTATCCCCAGGAAGCACACAGGGCCAAGAGAAGCAGTCTCTCATGTAGTCCCAAAAATAATTGGCATATGTGCAATTGATGAAAAGGTGTTGTTGAGATTCATTGGATTGATTGCATATTGAACACCAATTTGGAGTGCGACACCTGGAAGGCATTCTTCTTTGCAACATATCATTGGTGTTAACAACCTTTTTGAGAAGTTACCACAGAAAGAATTTTATTTTCTTGGGATATTTGTCCCTCCAAATAGTCACAAAAATATTATCAATAGTTCTTTCGGTAAGCCCATTGATATCAAGGATGTGCGATTGTATCGAGAAGAGGACATTTTCTTCCAGTCTCCAAATAATCTGATCTTCACCAATCAAAGGTCTGACCTCCATCATTAGACCAAATAGAGTGCAAGCTTCGTAATTTCATCATCCTTGAGGTTTCTTCTAAAAAAATAGTACCAAGAGGAACAATTATCAATCCAAGCTTCTCTCACAGTCAAATCTTTCTTAGTGGTGAGGGCAAATAGTAGAGGGAATTGCTGATGCAGTGGCTCATTGTTGATCCATGTGTCTTTCCAGAAGTGTGTGGCAGATCCATCTCTAATTTTGTGTGAGATTCTATCCCGAATAAGGGGGAGTAGATCAGCTGTGTTCTTCCACAGTCCTTTGTATGATGGATTCTTAATCACCTTGGTCGAATTGCCTCCCGGTTCTGTGCCATAAATGAATGCAATGGTCTTCCTCCACGAGGCCGATTTCCTAGACCGTAGACTCTTTTGGAATATTCAATCTTTAATTTCACGTACATTTTATTCTCTATATCTTTTACGTTCTGCAAATTTCTTCCTTATTTGGTGTTATGAATTATTGTTTTTCTAACTATGAATGTCCAACGGTCAGGACAAATATAAACAAATTGTACACTTGATTCTAGTTGCGTCATATTGTAATACCATTTTATTCGTGAATAATTGCAGCTCATGGTATGGAGAAGAGCGTCCTCGCTGGCTTGGTCCAATACCGTATGATTATCCAAAATATCTGATAGGTGAACTGCCAGGTGATTACGGATTTGATATTGCAGGTCTGAGTGAAGATCCTGTGGCTTTTCAGAAGTACTTCAAGTATATTAATCTTCTTATAGCCTAAATTTCTCGTCTGCTGTTCCTTTTTTCGCAAATATATGGAATTATAAGTAGATTTATTAGTCCATACCATAAGAAAATGTGATATGTGACTTGTGAATAGCGACTAGACAAAGGGACACCATTATGATGATTATCAATGCACATATGCAGGGACAGTAATGAAATGATCTTGCGAACATTATATAGACATGACCTTGAATTCATCCCTGAATATTTATCCACATATTTGTTAGCTATGACACCAGACTTACGTACTCCACAGCTTGCAATCCAACTCTGAAGCCATTTGAGCTATTCTGTATGCAATATAACTTAGCCGACTAAAATTATCTTAGATAAGCAACTCTTATTGAAAAAATATATATATTTAATTTTTTATTATTTAATTCATTTCTTTACTCTATTATATCAGCTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCGTTTCATTTCATTGAACCCATCTGGTGGCGAGTTGGCTATTCAAAACTTAAGGTTTGTTTTTCCTCCATCTTCTGGATATTTATTACATGAAATCTTTCTCTCGTGTCCACCTACCTAAAAATTAATTTTCTACGGATTTCCTTAATATCCAAATATTGTAAGATCAGACTGTATGCCTCATGACAATAGTCGAGCTGTAAGAAAACGGGTCCGAACAGTCTCGGATAAAAAAAAAAAACTATCTCACCTGTCTATAAGTTTTGTTTCTATATTTTCACCCTTCTATCTGGTTATATTTCTCATCACTCTCAAGTTGTTGTTTATCTTACTGTTTCTGTTCAATATTGTTATATTTTAGGTCCCACTTGATAATCATTTGATTTTTCGTTTTTTGTTTTTGAAATTAAAGCTTTTATTTACTAAAATTCTGTACATACGAGTTCATGTATGTAATTGTTTTTTATATTTGTCAATGTCCGGGCCAACTTATGCGTACCTTGACTATTTTTACGAGACAACTGCTTAACCCTACTACATTTGATTGCTATGATGATTCGTAAGAAATTAATTTCTAGGTAAGTAGTTACCATGAGTTTTACTCGCCCTATTTGACCACCAGGGCAACCATGATTGTTATGTCTCCCTTTATTTATGAAATCAAATAATAAACTAATACTACACCTCTTTTTTTTATATCCACGACTGTCTGAGCCAGATTGCGTGCACCTCAACTAGGGGTGTTCGTCGGTACTGGTGGGTCGTCCTCTGAGTCACTCTCGCAAACAAAGAAAAAAAGAGATGGAATTAATTCAAGCCAACACTCTTTGCTTTCGCTTCGCTTGCTTCGCACCTCTCCTTTCCTTTCGGTCTCGCATATTCCATTTCTGCAACATTAATAGAAGAAAGAAGCGCTGCTGCTTTACTTGATATTGTATTTCCCGAGTGAAAGAATAAATAAGGTGAAATTGTGATAGAAGCTGCTTGACGCATCTTTCCCGAACGAAGCGAAGCCAATTTCCCATGTTTACAAGGTTCGGTCGGGGTTGTTTTTTTGGAGAAAACCGACATTGATAAACGACATATCGGTTTTCTAATAATAAAAACCGAAAAAAATTTTGAATCGAGAATTCCGACCGACGGTCGGTCGGGTCGGTTAAGGTTTTTTTTAAAAAAAATCTAAATATTTTTCATTTGGAAACCATGGATTTACTCTTATAACTTAATTTTTTTAGAAAATTTTCCGACCGACCGACCGTCGGTTAATTATTTAATTTAACCGACTCCGACCGACCGACCTTGATTCGGTCGGTTTTGGTCGGTCGGTTCGGTTTTCGGATAAAATGTGAACACCCCTAACCTCAACTATTGTCGTCTGACCCTACCAGTTTGGATGTGAAGGAAAATAATACACCTTTACCTCTTATTAGTTAGAGATTAGTTACTCAGTAGTTAGTTAGGCTAAGCAAAAATTAAATAGTTTTGTAGCATATGCTTGTAACTAAGTTAAAACAATTTTATTATAATAAACTCATTTAAAATGAACAAAAAGAAACCTAAGTTCAATTTTTGACGGGTAACCAACCAATACCAAACTGGTAGAATTTAAGAGAAAAAGTAGAGACTCGAATATCATACAACCTGCTTAATATTGACTTTATAGGATTTAGCAACAACTAACAGCAATCCAAGGGAGCGAATTGTGACACAACTCTAGCTCATAGTACCTAACTTTAGAGAGACAATGAAAGAGGAGGTGAGAGAAGAAATGTTTTCTGAGATAGTGTATTGCAAGAGGTGGAAGAGCCTTCTTTATTTAGGTTCAAGAAAGGAAAGAGTGTTGATTATAAAGTTGGAGATACAAAATCTTTGAAATTCTAAAGCTAATTTTGATAATGTTAGTTAATTCTAGATTTATTTTCTAGCAGCGTAGGGATAACTTTTCACCTACAACGTTTCGTATTTCCTTCTTAAAAATTCATGGTGGTGTAGTACCTCACCCTAACTTCCCGCACTTATCTTACTGTTTGTATTCTCTTTCCACCAGGGAGATACACTCGATTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTAATGGTAACCTATATCAGACAATCTTCTTTTTGTCATATCCATTGGGTACTTTAATTAAATGGTTGGGGAAAGCGTGACATTATAACATGTTCTGTTCTAGGTTCAACTTGTGTTAACCTAAATCAGAAGTCTACATCTTTCCATTCCACCAAAACACAACAAATAGTTTGGTTCCCATTGCATAAGCTTGTTTGAAAATTAGGAAATAAAATTTTCCTTTTGGAGATTACACAAGTTAGAGAAAATTAGATGTTCTATTGCTAAGTTGAGTGTATTAAACTATCATTTGTCTGATTGTTTTTACAACTGTATGATGCAAATTAAAATGCAAATAGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATTTGCCGGGGGATATAAATTATCCAGGTGGTGTATTGTTTGATCCCTTGAACCTGTCCAAGGATGCTGCAGCGTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCATGGCTAGGATTTTACAGTCAAGCAGCATTGACCGGTAAGGGACCGGTCCAAAACCTTGTCGACCACATTTCAGACCCTTTCCACAATAACTTCCTTTCCCTGCTCAACTGACTGGAATTTGGGCTAGAAGGTATAGTTTCTTCAAATCTGTATAGTGTTTGTATATCTGTATAGTATTTGTACGTAACGGATGAGTTGATACTTGATGGCATGGTGTTACTATAAATATTTTATCTTAGTTATATAAAGTATCTTTGGTCATAGTACTGCTGATGTGCTCTTGTAATTTTGAAATGCTGTTGTATTTGTGATATTCATGACATCCACCCCCTATAGGCCTTGTTGGTTCTTACAGCATTTCATTTCAATTTTTTTGGTTGAAATGAAATGAGGTCCCTACAAAATGAATGATGAAGAGAGAATAATTAGGTGGAGGAGTCTTTATCAGCCT

mRNA sequence

CCGGGCCTTAGCTTGTGGTTGATGGGTTGTGGCTCGAAGAAACTTTCTCAAATAGGAAAGAGCAATATCAGTCCACACAGCCAAGCAATAAAATGAAGCAGTGTGTGTGAGATAAGGTTGATGCGTTGTGGCTCCAATGGCGACCTTTCAGTTTGAGCCACAAGCTTCTCCATCTTCCTCATTCCTCGGGAGCTCTCTTCTTCCACAGCTTCGTAGTCCGACCCCCACAACCCTTCATCTTCGGAACACCCACTCCATCCCTCGTCGTCCGATCTGCACAGCTTCTTGGCAGGAGCTTGCCGGGGTTCTCGTTTTCTCCGCAATTCCCTTCACCGCTGTCAAAGCCGTCGCCAACAGCCCACTCGGGGCGTCGCTCCAGAGGCAATTGCAGAAGAAAAAAAACGCTGCCATCGCCAATTCTTCCACCTTCAACGCTCTTGCCGCCCAGGCTAGAAAACGCAGCTCATGGTATGGAGAAGAGCGTCCTCGCTGGCTTGGTCCAATACCGTATGATTATCCAAAATATCTGATAGGTGAACTGCCAGGTGATTACGGATTTGATATTGCAGGTCTGAGTGAAGATCCTGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCGTTTCATTTCATTGAACCCATCTGGTGGCGAGTTGGCTATTCAAAACTTAAGGGAGATACACTCGATTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTAATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATTTGCCGGGGGATATAAATTATCCAGGTGGTGTATTGTTTGATCCCTTGAACCTGTCCAAGGATGCTGCAGCGTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCATGGCTAGGATTTTACAGTCAAGCAGCATTGACCGGTAAGGGACCGGTCCAAAACCTTGTCGACCACATTTCAGACCCTTTCCACAATAACTTCCTTTCCCTGCTCAACTGACTGGAATTTGGGCTAGAAGGTATAGTTTCTTCAAATCTGTATAGTGTTTGTATATCTGTATAGTATTTGTACGTAACGGATGAGTTGATACTTGATGGCATGGTGTTACTATAAATATTTTATCTTAGTTATATAAAGTATCTTTGGTCATAGTACTGCTGATGTGCTCTTGTAATTTTGAAATGCTGTTGTATTTGTGATATTCATGACATCCACCCCCTATAGGCCTTGTTGGTTCTTACAGCATTTCATTTCAATTTTTTTGGTTGAAATGAAATGAGGTCCCTACAAAATGAATGATGAAGAGAGAATAATTAGGTGGAGGAGTCTTTATCAGCCT

Coding sequence (CDS)

ATGGCGACCTTTCAGTTTGAGCCACAAGCTTCTCCATCTTCCTCATTCCTCGGGAGCTCTCTTCTTCCACAGCTTCGTAGTCCGACCCCCACAACCCTTCATCTTCGGAACACCCACTCCATCCCTCGTCGTCCGATCTGCACAGCTTCTTGGCAGGAGCTTGCCGGGGTTCTCGTTTTCTCCGCAATTCCCTTCACCGCTGTCAAAGCCGTCGCCAACAGCCCACTCGGGGCGTCGCTCCAGAGGCAATTGCAGAAGAAAAAAAACGCTGCCATCGCCAATTCTTCCACCTTCAACGCTCTTGCCGCCCAGGCTAGAAAACGCAGCTCATGGTATGGAGAAGAGCGTCCTCGCTGGCTTGGTCCAATACCGTATGATTATCCAAAATATCTGATAGGTGAACTGCCAGGTGATTACGGATTTGATATTGCAGGTCTGAGTGAAGATCCTGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGTGCTTTAATTCCAGAGATCTTAGATATTTTTGGAGCGTTTCATTTCATTGAACCCATCTGGTGGCGAGTTGGCTATTCAAAACTTAAGGGAGATACACTCGATTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCCATTTTAATGGTTGGACCCGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATTTGCCGGGGGATATAAATTATCCAGGTGGTGTATTGTTTGATCCCTTGAACCTGTCCAAGGATGCTGCAGCGTTTGAGGAACTTAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCATGGCTAGGATTTTACAGTCAAGCAGCATTGACCGGTAAGGGACCGGTCCAAAACCTTGTCGACCACATTTCAGACCCTTTCCACAATAACTTCCTTTCCCTGCTCAACTGA

Protein sequence

MATFQFEPQASPSSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLVFSAIPFTAVKAVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRWLGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLVDHISDPFHNNFLSLLN

Homology

[Close]

BLAST of Sed0015290 vs. NCBI nr
Match: XP_038898449.1 (chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 584.7 bits (1506), Expect = 4.9e-163
Identity = 287/322 (89.13%), Postives = 302/322 (93.79%), Query Frame = 0


Query: 10  ASPSSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLVFSAIPFTAVK 69
           +S S+SF GSS L +LRS TP TL+LRN HSIP R  C ASWQELAGVL+FSAIPFTAVK
Sbjct: 26  SSSSASFYGSS-LQRLRSRTP-TLNLRNGHSIPHRSTCRASWQELAGVLIFSAIPFTAVK 85

Query: 70  AVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRWLGPIPYDYPK 129
           A+ANSPLG SLQRQL+KKK +AIANSS F  LA +ARK SSWYGEERPRWLGP+PYDYPK
Sbjct: 86  AIANSPLGESLQRQLEKKKKSAIANSSKFKVLAEEARKDSSWYGEERPRWLGPLPYDYPK 145

Query: 130 YLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFI 189
           YL GELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHF 
Sbjct: 146 YLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFT 205

Query: 190 EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP 249
           EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGV+VIAICQAILMVGPEYARYCGIEALEP
Sbjct: 206 EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVVVIAICQAILMVGPEYARYCGIEALEP 265

Query: 250 LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG 309
           LGI+LPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Sbjct: 266 LGIFLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG 325

Query: 310 PVQNLVDHISDPFHNNFLSLLN 332
           PVQNL++HISDPFHNNFLSLLN
Sbjct: 326 PVQNLLEHISDPFHNNFLSLLN 345

[Close]

BLAST of Sed0015290 vs. NCBI nr
Match: XP_008453032.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo])

HSP 1 Score: 581.6 bits (1498), Expect = 4.2e-162
Identity = 285/322 (88.51%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 10  ASPSSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLVFSAIPFTAVK 69
           +S S+SF G + L QLR P  TTL+LR+ HSI  R  C ASWQELAGVL+FSA+PFTAVK
Sbjct: 50  SSSSASFYG-TYLQQLR-PLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVK 109

Query: 70  AVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRWLGPIPYDYPK 129
           A+ANSPLG SLQRQL+KKK +A+ANSS F ALA +ARK SSWYGEERPRWLGP+PYDYPK
Sbjct: 110 AIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPK 169

Query: 130 YLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFI 189
           YL GELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHF 
Sbjct: 170 YLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFT 229

Query: 190 EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP 249
           EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP
Sbjct: 230 EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP 289

Query: 250 LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG 309
           LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Sbjct: 290 LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG 349

Query: 310 PVQNLVDHISDPFHNNFLSLLN 332
           PVQNL+DHISDPFHNNFLSLLN
Sbjct: 350 PVQNLLDHISDPFHNNFLSLLN 369

[Close]

BLAST of Sed0015290 vs. NCBI nr
Match: XP_004145567.1 (chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-161
Identity = 283/321 (88.16%), Postives = 298/321 (92.83%), Query Frame = 0


Query: 11  SPSSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLVFSAIPFTAVKA 70
           S SS+ L  + L Q R P  TTL+LR+ HSI  R  C ASWQELAGVL+FSAIPFTAVKA
Sbjct: 14  SSSSASLFGTYLQQFR-PLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAIPFTAVKA 73

Query: 71  VANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRWLGPIPYDYPKY 130
           +ANSPLG SLQRQL+KKKN+A+ANSS F ALA +ARK SSWYGEERPRWLGP+PYDYPKY
Sbjct: 74  IANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPKY 133

Query: 131 LIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFIE 190
           L GELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGAL+PEILDIFGAFHF E
Sbjct: 134 LTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAMLASLGALVPEILDIFGAFHFTE 193

Query: 191 PIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPL 250
           PIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPL
Sbjct: 194 PIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPL 253

Query: 251 GIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP 310
           GIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
Sbjct: 254 GIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP 313

Query: 311 VQNLVDHISDPFHNNFLSLLN 332
           VQNL+DHI+DPFHNNFLSLLN
Sbjct: 314 VQNLLDHIADPFHNNFLSLLN 333

[Close]

BLAST of Sed0015290 vs. NCBI nr
Match: XP_022936160.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata])

HSP 1 Score: 579.3 bits (1492), Expect = 2.1e-161
Identity = 287/332 (86.45%), Postives = 304/332 (91.57%), Query Frame = 0


Query: 6   FEPQASP------SSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLV 65
           F+P  SP      S+SF GSS L QLRS T   L+LRN+ SIP R  CTASWQELAGVL+
Sbjct: 6   FQPHTSPSAISSSSASFYGSS-LQQLRSRT-IALNLRNSPSIPHRFTCTASWQELAGVLI 65

Query: 66  FSAIPFTAVKAVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRW 125
           FSAIPFTAVKA+ANSP G SLQRQL+KKKNAA+A SS F ALA QARK SSWYGE+RPRW
Sbjct: 66  FSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPRW 125

Query: 126 LGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEI 185
           LGP+PY+YPKYL GELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGAL+PEI
Sbjct: 126 LGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPEI 185

Query: 186 LDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 245
           LDIFGAFHF EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA
Sbjct: 186 LDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 245

Query: 246 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 305
           RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF
Sbjct: 246 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 305

Query: 306 YSQAALTGKGPVQNLVDHISDPFHNNFLSLLN 332
           YSQAALTGKGP+QNL++H+SDPFHNNFLSLLN
Sbjct: 306 YSQAALTGKGPIQNLLEHVSDPFHNNFLSLLN 335

[Close]

BLAST of Sed0015290 vs. NCBI nr
Match: XP_023521109.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578.2 bits (1489), Expect = 4.6e-161
Identity = 286/332 (86.14%), Postives = 304/332 (91.57%), Query Frame = 0


Query: 6   FEPQASP------SSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLV 65
           F+P  SP      S+SF GSS L QLRS T   L+LRN+ SIP R  CTASWQELAGVL+
Sbjct: 6   FQPHTSPSAISSSSASFYGSS-LQQLRSRT-IALNLRNSPSIPHRFTCTASWQELAGVLI 65

Query: 66  FSAIPFTAVKAVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRW 125
           FSAIPFTAVKA+ANSP G SLQRQL+KKKNAA+A SS F ALA +ARK SSWYGE+RPRW
Sbjct: 66  FSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEEARKDSSWYGEKRPRW 125

Query: 126 LGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEI 185
           LGP+PY+YPKYL GELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGAL+PEI
Sbjct: 126 LGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPEI 185

Query: 186 LDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 245
           LDIFGAFHF EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA
Sbjct: 186 LDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 245

Query: 246 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 305
           RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF
Sbjct: 246 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 305

Query: 306 YSQAALTGKGPVQNLVDHISDPFHNNFLSLLN 332
           YSQAALTGKGP+QNL++H+SDPFHNNFLSLLN
Sbjct: 306 YSQAALTGKGPIQNLLEHVSDPFHNNFLSLLN 335

[Close]

BLAST of Sed0015290 vs. ExPASy Swiss-Prot
Match: Q9C9K1 (Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB7 PE=2 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 8.0e-140
Identity = 241/331 (72.81%), Postives = 276/331 (83.38%), Query Frame = 0


Query: 1   MATFQFEPQASPSSSFLGSSLLPQLRSPTPTTLHLRNTHSIPR-RPICTASWQELAGVLV 60
           MA FQ E  +S SSS+     LP++    P     RN  ++ + R IC ASWQELAGVLV
Sbjct: 1   MALFQ-EKLSSLSSSYSSIHSLPRILVSKP-----RNRIAVTKSRSICRASWQELAGVLV 60

Query: 61  FSAIPFTAVKAVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRW 120
           FSAIPFTAVKA+ANS +G SL+R+L++KK  A+ NSS F + A +AR  S WYG+ERPRW
Sbjct: 61  FSAIPFTAVKAIANSSIGVSLRRRLEEKKKEAVENSSRFKSKAQEARNDSKWYGKERPRW 120

Query: 121 LGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEI 180
            GPIPYDYP YL GELPGDYGFDIAGL +D + F KYFNFEILHARWAMLA+LGALIPE+
Sbjct: 121 FGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEV 180

Query: 181 LDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 240
            D+ G FHF EP+WWRVGYSKL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYA
Sbjct: 181 FDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYA 240

Query: 241 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 300
           RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGF
Sbjct: 241 RYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGF 300

Query: 301 YSQAALTGKGPVQNLVDHISDPFHNNFLSLL 331
           Y+QAA TGKGPVQNLVDH+SDP HNN +++L
Sbjct: 301 YAQAAFTGKGPVQNLVDHVSDPLHNNLIAML 325

[Close]

BLAST of Sed0015290 vs. ExPASy Swiss-Prot
Match: P22686 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii OX=3054 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-52
Identity = 113/245 (46.12%), Postives = 141/245 (57.55%), Query Frame = 0


Query: 82  RQLQKKKNAAIANSSTFNALAAQARKRS-SWYGEERPRWLGPIPYDYPKYLIGELPGDYG 141
           R L  K  AA   + T    AA A+     WYG +R +WLGP   + P YL GE PGDYG
Sbjct: 9   RALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYG 68

Query: 142 FDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFIEPIWWRVGYSK 201
           +D AGLS DP  F+KY   E++HARWA+L +LG L PE+L  +    F EP+W++ G   
Sbjct: 69  WDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQI 128

Query: 202 LKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINY 261
                LDYLG P   L  +Q ++     Q +LM   E  R  G  A E L    PG+   
Sbjct: 129 FSEGGLDYLGSPA--LIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGE--- 188

Query: 262 PGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLVDHISD 321
                FDPL L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP+QNL DH++D
Sbjct: 189 ----SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLAD 244

Query: 322 PFHNN 326
           P  NN
Sbjct: 249 PGTNN 244

[Close]

BLAST of Sed0015290 vs. ExPASy Swiss-Prot
Match: P14278 (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB4 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-52
Identity = 111/218 (50.92%), Postives = 136/218 (62.39%), Query Frame = 0


Query: 108 RSSWYGEERPRWLGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWA 167
           +S WYGE+RP++LGP     P YL GE PGDYG+D AGLS DP  F +    E++H RWA
Sbjct: 46  QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105

Query: 168 MLASLGALIPEILDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAI 227
           ML +LG + PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++ I  
Sbjct: 106 MLGALGCVFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAIWA 165

Query: 228 CQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIK 287
           CQ +LM   E  R  G     PLG  L  D  YPGG  FDPL L+ D  AF ELKVKEIK
Sbjct: 166 CQVVLMGFVEGYRVGG----GPLGEGL--DKIYPGGA-FDPLGLADDPEAFAELKVKEIK 225

Query: 288 NGRLAMVAWLGFYSQAALTGKGPVQNLVDHISDPFHNN 326
           NGRLAM +  GF+ QA +TGKGP++NL DHI+DP  NN
Sbjct: 226 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANN 253

[Close]

BLAST of Sed0015290 vs. ExPASy Swiss-Prot
Match: Q9XF87 (Chlorophyll a-b binding protein 2.4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.4 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.3e-52
Identity = 114/242 (47.11%), Postives = 145/242 (59.92%), Query Frame = 0


Query: 84  LQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRWLGPIPYDYPKYLIGELPGDYGFDI 143
           L +K  A+            ++  +S WYG +RP++LGP   + P YL GE PGDYG+D 
Sbjct: 23  LLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDT 82

Query: 144 AGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFIEPIWWRVGYSKLKG 203
           AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G      
Sbjct: 83  AGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSE 142

Query: 204 DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGG 263
             LDYLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG
Sbjct: 143 GGLDYLGNP--NLIHAQSILAIWACQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGG 202

Query: 264 VLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLVDHISDPFH 323
             FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL DHI+DP  
Sbjct: 203 A-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVA 254

Query: 324 NN 326
           NN
Sbjct: 263 NN 254

[Close]

BLAST of Sed0015290 vs. ExPASy Swiss-Prot
Match: P07370 (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB1B PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.3e-52
Identity = 110/226 (48.67%), Postives = 139/226 (61.50%), Query Frame = 0


Query: 100 ALAAQARKRSSWYGEERPRWLGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNF 159
           A+A  A   S WYG +R ++LGP   + P YL GE PGDYG+D AGLS DP  F K    
Sbjct: 38  AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97

Query: 160 EILHARWAMLASLGALIPEILDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGS 219
           E++H RWAML +LG + PE+L   G   F E +W++ G        LDYLG P   L  +
Sbjct: 98  EVIHCRWAMLGALGCVFPELLARNGV-KFGEAVWFKAGSQIFSEGGLDYLGNPS--LVHA 157

Query: 220 QGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFE 279
           Q ++ I  CQ +LM   E  R  G     PLG  +  D  YPGG  FDPL L++D  AF 
Sbjct: 158 QSILAIWACQVVLMGAVEGYRIAG----GPLGEVV--DPLYPGG-SFDPLGLAEDPEAFA 217

Query: 280 ELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLVDHISDPFHNN 326
           ELKVKEIKNGRLAM +  GF+ QA +TGKGP++NL DH++DP +NN
Sbjct: 218 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253

[Close]

BLAST of Sed0015290 vs. ExPASy TrEMBL
Match: A0A1S3BWE1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493859 PE=3 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.0e-162
Identity = 285/322 (88.51%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 10  ASPSSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLVFSAIPFTAVK 69
           +S S+SF G + L QLR P  TTL+LR+ HSI  R  C ASWQELAGVL+FSA+PFTAVK
Sbjct: 50  SSSSASFYG-TYLQQLR-PLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVK 109

Query: 70  AVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRWLGPIPYDYPK 129
           A+ANSPLG SLQRQL+KKK +A+ANSS F ALA +ARK SSWYGEERPRWLGP+PYDYPK
Sbjct: 110 AIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPK 169

Query: 130 YLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFI 189
           YL GELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHF 
Sbjct: 170 YLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFT 229

Query: 190 EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP 249
           EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP
Sbjct: 230 EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP 289

Query: 250 LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG 309
           LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Sbjct: 290 LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG 349

Query: 310 PVQNLVDHISDPFHNNFLSLLN 332
           PVQNL+DHISDPFHNNFLSLLN
Sbjct: 350 PVQNLLDHISDPFHNNFLSLLN 369

[Close]

BLAST of Sed0015290 vs. ExPASy TrEMBL
Match: A0A6J1FCV0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442842 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.0e-161
Identity = 287/332 (86.45%), Postives = 304/332 (91.57%), Query Frame = 0


Query: 6   FEPQASP------SSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLV 65
           F+P  SP      S+SF GSS L QLRS T   L+LRN+ SIP R  CTASWQELAGVL+
Sbjct: 6   FQPHTSPSAISSSSASFYGSS-LQQLRSRT-IALNLRNSPSIPHRFTCTASWQELAGVLI 65

Query: 66  FSAIPFTAVKAVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRW 125
           FSAIPFTAVKA+ANSP G SLQRQL+KKKNAA+A SS F ALA QARK SSWYGE+RPRW
Sbjct: 66  FSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPRW 125

Query: 126 LGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEI 185
           LGP+PY+YPKYL GELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGAL+PEI
Sbjct: 126 LGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPEI 185

Query: 186 LDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 245
           LDIFGAFHF EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA
Sbjct: 186 LDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 245

Query: 246 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 305
           RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF
Sbjct: 246 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 305

Query: 306 YSQAALTGKGPVQNLVDHISDPFHNNFLSLLN 332
           YSQAALTGKGP+QNL++H+SDPFHNNFLSLLN
Sbjct: 306 YSQAALTGKGPIQNLLEHVSDPFHNNFLSLLN 335

[Close]

BLAST of Sed0015290 vs. ExPASy TrEMBL
Match: A0A6J1IGJ6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111474607 PE=3 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.5e-161
Identity = 285/332 (85.84%), Postives = 303/332 (91.27%), Query Frame = 0


Query: 6   FEPQASP------SSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLV 65
           F P  SP      S+SF GSS L QLRS T   L+LRN+ SIP R  CTASWQELAG+L+
Sbjct: 6   FHPHTSPSAVSSSSASFYGSS-LQQLRSRT-IALNLRNSPSIPHRFTCTASWQELAGILI 65

Query: 66  FSAIPFTAVKAVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRW 125
           FSAIPFTAVKA+ANSP G SLQRQL+KKKNAA+A SS F ALA QARK SSWYGE+RPRW
Sbjct: 66  FSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPRW 125

Query: 126 LGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEI 185
           LGP+PY+YPKYL GELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGAL+PEI
Sbjct: 126 LGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPEI 185

Query: 186 LDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 245
           LDIFGAFHF EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA
Sbjct: 186 LDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 245

Query: 246 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 305
           RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLS+DAAAFEELKVKEIKNGRLAMVAWLGF
Sbjct: 246 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSEDAAAFEELKVKEIKNGRLAMVAWLGF 305

Query: 306 YSQAALTGKGPVQNLVDHISDPFHNNFLSLLN 332
           YSQAALTGKGP+QNL++H+SDPFHNNFLSLLN
Sbjct: 306 YSQAALTGKGPIQNLLEHVSDPFHNNFLSLLN 335

[Close]

BLAST of Sed0015290 vs. ExPASy TrEMBL
Match: A0A5A7VCG1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G004020 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.5e-160
Identity = 283/322 (87.89%), Postives = 298/322 (92.55%), Query Frame = 0


Query: 10  ASPSSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQELAGVLVFSAIPFTAVK 69
           +S S+SF G + L QLR P  TTL+LR+ HSI  R  C ASWQELAGVL+FSA+PFTAVK
Sbjct: 14  SSSSASFYG-TYLQQLR-PLTTTLNLRSNHSISHRSTCRASWQELAGVLIFSAVPFTAVK 73

Query: 70  AVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRWLGPIPYDYPK 129
           A+ANSPLG SLQRQL+KKK +A+ANSS F ALA +ARK SSWYGEERPRWLGP+PYDYPK
Sbjct: 74  AIANSPLGESLQRQLEKKKKSAVANSSKFKALAEEARKDSSWYGEERPRWLGPLPYDYPK 133

Query: 130 YLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFI 189
           YL GELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGAL+PEILDIFGAFHF 
Sbjct: 134 YLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFT 193

Query: 190 EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP 249
           EPIWWRVGYSKLK  TLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP
Sbjct: 194 EPIWWRVGYSKLKVYTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEP 253

Query: 250 LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG 309
           LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Sbjct: 254 LGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG 313

Query: 310 PVQNLVDHISDPFHNNFLSLLN 332
           PVQNL+DHISDPFHNNFLSLLN
Sbjct: 314 PVQNLLDHISDPFHNNFLSLLN 333

[Close]

BLAST of Sed0015290 vs. ExPASy TrEMBL
Match: A0A6J1CK83 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012208 PE=3 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.8e-158
Identity = 283/337 (83.98%), Postives = 298/337 (88.43%), Query Frame = 0


Query: 1   MATFQFEPQASP------SSSFLGSSLLPQLRSPTPTTLHLRNTHSIPRRPICTASWQEL 60
           MA    +P  SP      S+SF GSSL        P   +LRN+ S+P R  C ASWQEL
Sbjct: 4   MAMAILQPHTSPSAIPSSSASFYGSSL------QQPRLSNLRNSRSVPYRSTCKASWQEL 63

Query: 61  AGVLVFSAIPFTAVKAVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGE 120
           AGVL+FSAIPFTAVKA+ANSPLG SLQRQ++KKK AAIANSS F ALA +ARK SSWYGE
Sbjct: 64  AGVLIFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGE 123

Query: 121 ERPRWLGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGA 180
           ERPRWLGPIPY+YPKYL G+LPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGA
Sbjct: 124 ERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGA 183

Query: 181 LIPEILDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMV 240
           LIPEILDI GAFHF EPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMV
Sbjct: 184 LIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMV 243

Query: 241 GPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMV 300
           GPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMV
Sbjct: 244 GPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMV 303

Query: 301 AWLGFYSQAALTGKGPVQNLVDHISDPFHNNFLSLLN 332
           AWLGFYSQAALTGKGPVQNL++HISDPFHNNFLSLLN
Sbjct: 304 AWLGFYSQAALTGKGPVQNLLEHISDPFHNNFLSLLN 334

[Close]

BLAST of Sed0015290 vs. TAIR 10
Match: AT1G76570.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 498.0 bits (1281), Expect = 5.7e-141
Identity = 241/331 (72.81%), Postives = 276/331 (83.38%), Query Frame = 0


Query: 1   MATFQFEPQASPSSSFLGSSLLPQLRSPTPTTLHLRNTHSIPR-RPICTASWQELAGVLV 60
           MA FQ E  +S SSS+     LP++    P     RN  ++ + R IC ASWQELAGVLV
Sbjct: 1   MALFQ-EKLSSLSSSYSSIHSLPRILVSKP-----RNRIAVTKSRSICRASWQELAGVLV 60

Query: 61  FSAIPFTAVKAVANSPLGASLQRQLQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRW 120
           FSAIPFTAVKA+ANS +G SL+R+L++KK  A+ NSS F + A +AR  S WYG+ERPRW
Sbjct: 61  FSAIPFTAVKAIANSSIGVSLRRRLEEKKKEAVENSSRFKSKAQEARNDSKWYGKERPRW 120

Query: 121 LGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEI 180
            GPIPYDYP YL GELPGDYGFDIAGL +D + F KYFNFEILHARWAMLA+LGALIPE+
Sbjct: 121 FGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEV 180

Query: 181 LDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYA 240
            D+ G FHF EP+WWRVGYSKL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYA
Sbjct: 181 FDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYA 240

Query: 241 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 300
           RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGF
Sbjct: 241 RYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGF 300

Query: 301 YSQAALTGKGPVQNLVDHISDPFHNNFLSLL 331
           Y+QAA TGKGPVQNLVDH+SDP HNN +++L
Sbjct: 301 YAQAAFTGKGPVQNLVDHVSDPLHNNLIAML 325

[Close]

BLAST of Sed0015290 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-53
Identity = 114/242 (47.11%), Postives = 145/242 (59.92%), Query Frame = 0


Query: 84  LQKKKNAAIANSSTFNALAAQARKRSSWYGEERPRWLGPIPYDYPKYLIGELPGDYGFDI 143
           L +K  A+            ++  +S WYG +RP++LGP   + P YL GE PGDYG+D 
Sbjct: 23  LLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDT 82

Query: 144 AGLSEDPVAFQKYFNFEILHARWAMLASLGALIPEILDIFGAFHFIEPIWWRVGYSKLKG 203
           AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G      
Sbjct: 83  AGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSE 142

Query: 204 DTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGG 263
             LDYLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG
Sbjct: 143 GGLDYLGNP--NLIHAQSILAIWACQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGG 202

Query: 264 VLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLVDHISDPFH 323
             FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP++NL DHI+DP  
Sbjct: 203 A-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVA 254

Query: 324 NN 326
           NN
Sbjct: 263 NN 254

[Close]

BLAST of Sed0015290 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 203.4 bits (516), Expect = 2.9e-52
Identity = 109/218 (50.00%), Postives = 137/218 (62.84%), Query Frame = 0


Query: 108 RSSWYGEERPRWLGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWA 167
           +S WYG +RP++LGP   + P YL GE PGDYG+D AGLS DP  F K    E++H+RWA
Sbjct: 46  QSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105

Query: 168 MLASLGALIPEILDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAI 227
           ML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++ I  
Sbjct: 106 MLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 165

Query: 228 CQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIK 287
            Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+K
Sbjct: 166 VQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKVKELK 225

Query: 288 NGRLAMVAWLGFYSQAALTGKGPVQNLVDHISDPFHNN 326
           NGRLAM +  GF+ QA +TGKGP++NL DH++DP  NN
Sbjct: 226 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253

[Close]

BLAST of Sed0015290 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 203.4 bits (516), Expect = 2.9e-52
Identity = 109/218 (50.00%), Postives = 137/218 (62.84%), Query Frame = 0


Query: 108 RSSWYGEERPRWLGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWA 167
           +S WYG +RP++LGP   + P YL GE PGDYG+D AGLS DP  F K    E++H+RWA
Sbjct: 46  QSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105

Query: 168 MLASLGALIPEILDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAI 227
           ML +LG   PEIL   G   F E +W++ G        LDYLG P  +L  +Q ++ I  
Sbjct: 106 MLGALGCTFPEILSKNGV-KFGEAVWFKAGSQIFSEGGLDYLGNP--NLIHAQSILAIWA 165

Query: 228 CQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIK 287
            Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+K
Sbjct: 166 VQVVLMGFIEGYRIGG----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKVKELK 225

Query: 288 NGRLAMVAWLGFYSQAALTGKGPVQNLVDHISDPFHNN 326
           NGRLAM +  GF+ QA +TGKGP++NL DH++DP  NN
Sbjct: 226 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253

[Close]

BLAST of Sed0015290 vs. TAIR 10
Match: AT5G54270.1 (light-harvesting chlorophyll B-binding protein 3 )

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-51
Identity = 100/215 (46.51%), Postives = 131/215 (60.93%), Query Frame = 0


Query: 111 WYGEERPRWLGPIPYDYPKYLIGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLA 170
           WYG +R ++LGP     P YL GE PGDYG+D AGLS DP AF K    E++H RWAML 
Sbjct: 47  WYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106

Query: 171 SLGALIPEILDIFGAFHFIEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQA 230
           + G + PE+L  +    F EP+W++ G        LDYLG P  +L  +Q ++ +   Q 
Sbjct: 107 AFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNP--NLVHAQSILAVLGFQV 166

Query: 231 ILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGR 290
           ILM   E  R  G++ +        G+  YPGG  FDPL L+ D   F ELKVKEIKNGR
Sbjct: 167 ILMGLVEGFRINGLDGVG------EGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGR 226

Query: 291 LAMVAWLGFYSQAALTGKGPVQNLVDHISDPFHNN 326
           LAM +  GF+ QA +TGKGP++NL+DH+ +P  NN
Sbjct: 227 LAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253

The following BLAST results are available for this feature:

BLAST of Sed0015290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898449.1	4.9e-163	89.13	chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_008453032.2	4.2e-162	88.51	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis m...	[more]
XP_004145567.1	1.6e-161	88.16	chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]	[more]
XP_022936160.1	2.1e-161	86.45	chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]	[more]
XP_023521109.1	4.6e-161	86.14	chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0015290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9K1	8.0e-140	72.81	Chlorophyll a-b binding protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P22686	1.3e-52	46.12	Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas ...	[more]
P14278	2.8e-52	50.92	Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
Q9XF87	6.3e-52	47.11	Chlorophyll a-b binding protein 2.4, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
P07370	6.3e-52	48.67	Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of Sed0015290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWE1	2.0e-162	88.51	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1FCV0	1.0e-161	86.45	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1IGJ6	6.5e-161	85.84	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7VCG1	2.5e-160	87.89	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1CK83	1.8e-158	83.98	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Sed0015290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76570.1	5.7e-141	72.81	Chlorophyll A-B binding family protein	[more]
AT3G27690.1	4.4e-53	47.11	photosystem II light harvesting complex gene 2.3	[more]
AT2G05100.1	2.9e-52	50.00	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	2.9e-52	50.00	photosystem II light harvesting complex gene 2.2	[more]
AT5G54270.1	1.4e-51	46.51	light-harvesting chlorophyll B-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 128..303 e-value: 2.0E-40 score: 138.9
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 118..330 e-value: 2.8E-69 score: 235.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR21649:SF74	CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC	coord: 47..326
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 110..329
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 47..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015290.1	Sed0015290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding