Sed0015287 (gene) Chayote v1

Overview


Name	Sed0015287
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Calcium-binding EF hand family protein
Location	LG04: 47011336 .. 47012921 (-)
RNA-Seq Expression	Sed0015287
Synteny	Sed0015287

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAGGTCCCATTTCATTTTACTTCAAAAGCTATGGACCTGACCGTTCATAGAGATTACTTTTGATTTGAATTGTTTGAATTGTCAACATCTGACATCATTAGTAATCTAGCAAATGAAGTGGATGATCTATCTATTGATAATAGTGAACACTTTGTTTTTCTTGCTTCCTTGAGTTTAATGTCAAATATCACTGCTCATTGATTTCTGATCATTTCTGCTCTGGATGATATGTAGGTATTGATTGAATTTACTCATGATCAACACAAAAGGTAAGCAAGACTGAGTTTAAAGAAGTTCTCTCTGATCTTCTGCTCGGCATGGCTACCGGGTTGAAGCGAGATCCTATCATTATACTTCGCATCGATGGAGAAGACCTCCTTGAATTCATCAATGGCCCTGCTTACGAGCCCGAGATGGTTGACGCCTTTTCACAAATCGAGCGATCCGGAGGATCTCTTCGTGATTACATTGTTAAAGCTTTTGAAAATCTTACTGTGGAACAAGGGATGCCTCCTCCTTCAGACCCTTGGGTAATTATTTGAATAGAACCAATAAAACTTTGTTTAGCAATTTTACTCTATTCATGATTAGTAATATTTCTAGTAGTTTTATGTTTGAACTTGTTCCATCTTCTTGTTAGGTTATGAGCGATATTGTTGAACCAGCTCTCGAGTGGTGTGCGGCAAAGGAGAATTGGGACAGACCCGTCTCGCAAGAGACATTCATGTTGGAATTCAAAAGAGCTGCAGAGTGGGTAGCTCGACGCCTAAAAGAAAAGCCTGTTATTGTCGCTCATAGTGAAAACACCTTTGATGGCAGTGGCATTCGAAGACTGTTATCCAACAAATTCGAACTCGACAAGGTTATATAGCATCATAGTACTGTTTCTCAACAGTCTTTGCTTGATTAATATTGTTCTTGCATCATGTTTTGTGCTTCATCTGTCATAATTTGATCCGGGTGCAGTCACTGAAGACGGCAGTTCAGAGTGTCCCAAAAGATAAAACTGGGAAATTGTCAAAGGAACATCTGCAGTTGGCATTGGATCTGGTTGCTCCGTTAGCTGGTTTACCGCCGCTAGATTCCCTCGATCAGGTTACCGAACAATTAAATCAACAATCATCAATAACTTTAACATCAAGCGAACAATTAGCATAAACTTATGTTTGCCTTGTATAATTTAATCTACAGATGGGCAAGCGGCTCGTCGACGTATTCAAGATGGTTGATGCCAACGATGGGAAAGCAGTTGAAGAAGACGAGTTCAAGAAACTATTGACTGAGATTCTGGGAGCAGTGATGTTGCAGTTGGAAAGCAATCCAATCTCAGTTTCTTCAAATTCTGTTGTGCATGAGCCTCTTGCCTGCTCTTCTACGCTCTTGACTCCATTCTCTTAGTAATCATGTGAAACAGAGCTATTCTAAGGTAAAAAAAATGACATTTGTATAAGTTATCCTAATATTTGGAGCTTATTAACTGCAATAGAGAAAAGGACATGCAGCCTAGGCTTGTCATTTCAAATTAGCTTAGAGTTGGCTGTTCCTTATTACAGGCTGAAAAATGATGCTCCCTTGAATTAATA

mRNA sequence

TTAAAGGTCCCATTTCATTTTACTTCAAAAGCTATGGACCTGACCGTTCATAGAGATTACTTTTGATTTGAATTGTTTGAATTGTCAACATCTGACATCATTAGTAATCTAGCAAATGAAGTGGATGATCTATCTATTGATAATAGTATTGATTGAATTTACTCATGATCAACACAAAAGGTAAGCAAGACTGAGTTTAAAGAAGTTCTCTCTGATCTTCTGCTCGGCATGGCTACCGGGTTGAAGCGAGATCCTATCATTATACTTCGCATCGATGGAGAAGACCTCCTTGAATTCATCAATGGCCCTGCTTACGAGCCCGAGATGGTTGACGCCTTTTCACAAATCGAGCGATCCGGAGGATCTCTTCGTGATTACATTGTTAAAGCTTTTGAAAATCTTACTGTGGAACAAGGGATGCCTCCTCCTTCAGACCCTTGGGTTATGAGCGATATTGTTGAACCAGCTCTCGAGTGGTGTGCGGCAAAGGAGAATTGGGACAGACCCGTCTCGCAAGAGACATTCATGTTGGAATTCAAAAGAGCTGCAGAGTGGGTAGCTCGACGCCTAAAAGAAAAGCCTGTTATTGTCGCTCATAGTGAAAACACCTTTGATGGCAGTGGCATTCGAAGACTGTTATCCAACAAATTCGAACTCGACAAGTCACTGAAGACGGCAGTTCAGAGTGTCCCAAAAGATAAAACTGGGAAATTGTCAAAGGAACATCTGCAGTTGGCATTGGATCTGGTTGCTCCGTTAGCTGGTTTACCGCCGCTAGATTCCCTCGATCAGATGGGCAAGCGGCTCGTCGACGTATTCAAGATGGTTGATGCCAACGATGGGAAAGCAGTTGAAGAAGACGAGTTCAAGAAACTATTGACTGAGATTCTGGGAGCAGTGATGTTGCAGTTGGAAAGCAATCCAATCTCAGTTTCTTCAAATTCTGTTGTGCATGAGCCTCTTGCCTGCTCTTCTACGCTCTTGACTCCATTCTCTTAGTAATCATGTGAAACAGAGCTATTCTAAGGTAAAAAAAATGACATTTGTATAAGTTATCCTAATATTTGGAGCTTATTAACTGCAATAGAGAAAAGGACATGCAGCCTAGGCTTGTCATTTCAAATTAGCTTAGAGTTGGCTGTTCCTTATTACAGGCTGAAAAATGATGCTCCCTTGAATTAATA

Coding sequence (CDS)

ATGGCTACCGGGTTGAAGCGAGATCCTATCATTATACTTCGCATCGATGGAGAAGACCTCCTTGAATTCATCAATGGCCCTGCTTACGAGCCCGAGATGGTTGACGCCTTTTCACAAATCGAGCGATCCGGAGGATCTCTTCGTGATTACATTGTTAAAGCTTTTGAAAATCTTACTGTGGAACAAGGGATGCCTCCTCCTTCAGACCCTTGGGTTATGAGCGATATTGTTGAACCAGCTCTCGAGTGGTGTGCGGCAAAGGAGAATTGGGACAGACCCGTCTCGCAAGAGACATTCATGTTGGAATTCAAAAGAGCTGCAGAGTGGGTAGCTCGACGCCTAAAAGAAAAGCCTGTTATTGTCGCTCATAGTGAAAACACCTTTGATGGCAGTGGCATTCGAAGACTGTTATCCAACAAATTCGAACTCGACAAGTCACTGAAGACGGCAGTTCAGAGTGTCCCAAAAGATAAAACTGGGAAATTGTCAAAGGAACATCTGCAGTTGGCATTGGATCTGGTTGCTCCGTTAGCTGGTTTACCGCCGCTAGATTCCCTCGATCAGATGGGCAAGCGGCTCGTCGACGTATTCAAGATGGTTGATGCCAACGATGGGAAAGCAGTTGAAGAAGACGAGTTCAAGAAACTATTGACTGAGATTCTGGGAGCAGTGATGTTGCAGTTGGAAAGCAATCCAATCTCAGTTTCTTCAAATTCTGTTGTGCATGAGCCTCTTGCCTGCTCTTCTACGCTCTTGACTCCATTCTCTTAG

Protein sequence

MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTVEQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVIVAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGLPPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSVVHEPLACSSTLLTPFS

Homology

[Close]

BLAST of Sed0015287 vs. NCBI nr
Match: XP_038886819.1 (uncharacterized protein LOC120077051 isoform X1 [Benincasa hispida])

HSP 1 Score: 433.3 bits (1113), Expect = 1.4e-117
Identity = 219/256 (85.55%), Postives = 233/256 (91.02%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILRIDGEDLLEFIN PAYEPEMV  FSQI    GSL DYI KAFENLTV
Sbjct: 120 MAAGLKRDPIVILRIDGEDLLEFINSPAYEPEMVATFSQINLPEGSLHDYIFKAFENLTV 179

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           EQGMPPPSDPWVMSDIVEPALE+C   ENWD+PVSQETF+LEFKRAAE VA+RLKE+PVI
Sbjct: 180 EQGMPPPSDPWVMSDIVEPALEFCDVGENWDKPVSQETFLLEFKRAAEHVAQRLKEQPVI 239

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLSNKFELDKSL TA+QSVPKDKTGKL KEHLQLALDLV PLAGL
Sbjct: 240 VAHSENTFDGSSIRRLLSNKFELDKSLNTALQSVPKDKTGKLPKEHLQLALDLVGPLAGL 299

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL ++++M K L+DVFKMVDA+DGKAV+EDEFKKLLTEILGAVMLQLE NPISVSSNSV
Sbjct: 300 PPLGAINEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSV 359

Query: 241 VHEPLACSSTLLTPFS 257
           VHEPLACSSTLLTP S
Sbjct: 360 VHEPLACSSTLLTPSS 375

[Close]

BLAST of Sed0015287 vs. NCBI nr
Match: XP_038886820.1 (uncharacterized protein LOC120077051 isoform X2 [Benincasa hispida])

HSP 1 Score: 433.3 bits (1113), Expect = 1.4e-117
Identity = 219/256 (85.55%), Postives = 233/256 (91.02%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILRIDGEDLLEFIN PAYEPEMV  FSQI    GSL DYI KAFENLTV
Sbjct: 1   MAAGLKRDPIVILRIDGEDLLEFINSPAYEPEMVATFSQINLPEGSLHDYIFKAFENLTV 60

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           EQGMPPPSDPWVMSDIVEPALE+C   ENWD+PVSQETF+LEFKRAAE VA+RLKE+PVI
Sbjct: 61  EQGMPPPSDPWVMSDIVEPALEFCDVGENWDKPVSQETFLLEFKRAAEHVAQRLKEQPVI 120

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLSNKFELDKSL TA+QSVPKDKTGKL KEHLQLALDLV PLAGL
Sbjct: 121 VAHSENTFDGSSIRRLLSNKFELDKSLNTALQSVPKDKTGKLPKEHLQLALDLVGPLAGL 180

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL ++++M K L+DVFKMVDA+DGKAV+EDEFKKLLTEILGAVMLQLE NPISVSSNSV
Sbjct: 181 PPLGAINEMDKLLLDVFKMVDADDGKAVKEDEFKKLLTEILGAVMLQLEGNPISVSSNSV 240

Query: 241 VHEPLACSSTLLTPFS 257
           VHEPLACSSTLLTP S
Sbjct: 241 VHEPLACSSTLLTPSS 256

[Close]

BLAST of Sed0015287 vs. NCBI nr
Match: XP_022136155.1 (uncharacterized protein LOC111007917 [Momordica charantia])

HSP 1 Score: 426.0 bits (1094), Expect = 2.3e-115
Identity = 216/256 (84.38%), Postives = 230/256 (89.84%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILRIDGEDLLEFINGPAYEPEMV  FSQIE    SL DYIVKAFENLTV
Sbjct: 116 MAAGLKRDPIVILRIDGEDLLEFINGPAYEPEMVAIFSQIELPDSSLHDYIVKAFENLTV 175

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           E GMPPP+DPWVMSDIVEPA+E CAA ENWD PVSQE F+LEFKRAA+ VA+RLKE+PVI
Sbjct: 176 ELGMPPPADPWVMSDIVEPAIESCAAGENWDVPVSQEIFLLEFKRAADHVAQRLKEQPVI 235

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLS KFELDKSL  A+QSVPKDKTGKL KEHLQLALD++APLAGL
Sbjct: 236 VAHSENTFDGSSIRRLLSKKFELDKSLNAALQSVPKDKTGKLPKEHLQLALDMIAPLAGL 295

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL +LDQM K + DVFKMVDA+DGKAV+EDEFKKLLTEILGA MLQLE NPISVSSNSV
Sbjct: 296 PPLGALDQMDKLMSDVFKMVDADDGKAVKEDEFKKLLTEILGAAMLQLEGNPISVSSNSV 355

Query: 241 VHEPLACSSTLLTPFS 257
           VHEPLACSSTLLTP S
Sbjct: 356 VHEPLACSSTLLTPSS 371

[Close]

BLAST of Sed0015287 vs. NCBI nr
Match: XP_008447994.1 (PREDICTED: uncharacterized protein LOC103490312 isoform X2 [Cucumis melo])

HSP 1 Score: 423.3 bits (1087), Expect = 1.5e-114
Identity = 213/254 (83.86%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILR+DGEDLLEFIN  AYEPEM+  FS+I    GSL DYIVKAFENLTV
Sbjct: 39  MAAGLKRDPIVILRMDGEDLLEFINSSAYEPEMIATFSEINLPEGSLHDYIVKAFENLTV 98

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           EQGMPPPSD WVMSDI+EPALE CAA ENWD+PVSQE F+ EFKRAAE VA+RLKE+PVI
Sbjct: 99  EQGMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLFEFKRAAEHVAQRLKEQPVI 158

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLSNKFELDKSL TA+QSVP+DKTGKL KEHLQLALDLVAPLAGL
Sbjct: 159 VAHSENTFDGSSIRRLLSNKFELDKSLNTALQSVPRDKTGKLPKEHLQLALDLVAPLAGL 218

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL +LD+M K L+DVFKMVDA+DGK V+EDEFKKLLTEILGAVMLQLE +PISVSSNSV
Sbjct: 219 PPLGALDEMDKLLLDVFKMVDADDGKVVKEDEFKKLLTEILGAVMLQLEGSPISVSSNSV 278

Query: 241 VHEPLACSSTLLTP 255
           VHEPLACSSTLLTP
Sbjct: 279 VHEPLACSSTLLTP 292

[Close]

BLAST of Sed0015287 vs. NCBI nr
Match: XP_008447993.1 (PREDICTED: uncharacterized protein LOC103490312 isoform X1 [Cucumis melo] >KAA0049721.1 hypothetical protein E6C27_scaffold76G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 1.5e-114
Identity = 213/254 (83.86%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILR+DGEDLLEFIN  AYEPEM+  FS+I    GSL DYIVKAFENLTV
Sbjct: 113 MAAGLKRDPIVILRMDGEDLLEFINSSAYEPEMIATFSEINLPEGSLHDYIVKAFENLTV 172

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           EQGMPPPSD WVMSDI+EPALE CAA ENWD+PVSQE F+ EFKRAAE VA+RLKE+PVI
Sbjct: 173 EQGMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLFEFKRAAEHVAQRLKEQPVI 232

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLSNKFELDKSL TA+QSVP+DKTGKL KEHLQLALDLVAPLAGL
Sbjct: 233 VAHSENTFDGSSIRRLLSNKFELDKSLNTALQSVPRDKTGKLPKEHLQLALDLVAPLAGL 292

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL +LD+M K L+DVFKMVDA+DGK V+EDEFKKLLTEILGAVMLQLE +PISVSSNSV
Sbjct: 293 PPLGALDEMDKLLLDVFKMVDADDGKVVKEDEFKKLLTEILGAVMLQLEGSPISVSSNSV 352

Query: 241 VHEPLACSSTLLTP 255
           VHEPLACSSTLLTP
Sbjct: 353 VHEPLACSSTLLTP 366

[Close]

BLAST of Sed0015287 vs. ExPASy TrEMBL
Match: A0A6J1C333 (uncharacterized protein LOC111007917 OS=Momordica charantia OX=3673 GN=LOC111007917 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 216/256 (84.38%), Postives = 230/256 (89.84%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILRIDGEDLLEFINGPAYEPEMV  FSQIE    SL DYIVKAFENLTV
Sbjct: 116 MAAGLKRDPIVILRIDGEDLLEFINGPAYEPEMVAIFSQIELPDSSLHDYIVKAFENLTV 175

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           E GMPPP+DPWVMSDIVEPA+E CAA ENWD PVSQE F+LEFKRAA+ VA+RLKE+PVI
Sbjct: 176 ELGMPPPADPWVMSDIVEPAIESCAAGENWDVPVSQEIFLLEFKRAADHVAQRLKEQPVI 235

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLS KFELDKSL  A+QSVPKDKTGKL KEHLQLALD++APLAGL
Sbjct: 236 VAHSENTFDGSSIRRLLSKKFELDKSLNAALQSVPKDKTGKLPKEHLQLALDMIAPLAGL 295

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL +LDQM K + DVFKMVDA+DGKAV+EDEFKKLLTEILGA MLQLE NPISVSSNSV
Sbjct: 296 PPLGALDQMDKLMSDVFKMVDADDGKAVKEDEFKKLLTEILGAAMLQLEGNPISVSSNSV 355

Query: 241 VHEPLACSSTLLTPFS 257
           VHEPLACSSTLLTP S
Sbjct: 356 VHEPLACSSTLLTPSS 371

[Close]

BLAST of Sed0015287 vs. ExPASy TrEMBL
Match: A0A5D3CLV7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00920 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.1e-115
Identity = 213/254 (83.86%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILR+DGEDLLEFIN  AYEPEM+  FS+I    GSL DYIVKAFENLTV
Sbjct: 119 MAAGLKRDPIVILRMDGEDLLEFINSSAYEPEMIATFSEINLPEGSLHDYIVKAFENLTV 178

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           EQGMPPPSD WVMSDI+EPALE CAA ENWD+PVSQE F+ EFKRAAE VA+RLKE+PVI
Sbjct: 179 EQGMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLFEFKRAAEHVAQRLKEQPVI 238

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLSNKFELDKSL TA+QSVP+DKTGKL KEHLQLALDLVAPLAGL
Sbjct: 239 VAHSENTFDGSSIRRLLSNKFELDKSLNTALQSVPRDKTGKLPKEHLQLALDLVAPLAGL 298

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL +LD+M K L+DVFKMVDA+DGK V+EDEFKKLLTEILGAVMLQLE +PISVSSNSV
Sbjct: 299 PPLGALDEMDKLLLDVFKMVDADDGKVVKEDEFKKLLTEILGAVMLQLEGSPISVSSNSV 358

Query: 241 VHEPLACSSTLLTP 255
           VHEPLACSSTLLTP
Sbjct: 359 VHEPLACSSTLLTP 372

[Close]

BLAST of Sed0015287 vs. ExPASy TrEMBL
Match: A0A5A7U809 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00680 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.1e-115
Identity = 213/254 (83.86%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILR+DGEDLLEFIN  AYEPEM+  FS+I    GSL DYIVKAFENLTV
Sbjct: 113 MAAGLKRDPIVILRMDGEDLLEFINSSAYEPEMIATFSEINLPEGSLHDYIVKAFENLTV 172

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           EQGMPPPSD WVMSDI+EPALE CAA ENWD+PVSQE F+ EFKRAAE VA+RLKE+PVI
Sbjct: 173 EQGMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLFEFKRAAEHVAQRLKEQPVI 232

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLSNKFELDKSL TA+QSVP+DKTGKL KEHLQLALDLVAPLAGL
Sbjct: 233 VAHSENTFDGSSIRRLLSNKFELDKSLNTALQSVPRDKTGKLPKEHLQLALDLVAPLAGL 292

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL +LD+M K L+DVFKMVDA+DGK V+EDEFKKLLTEILGAVMLQLE +PISVSSNSV
Sbjct: 293 PPLGALDEMDKLLLDVFKMVDADDGKVVKEDEFKKLLTEILGAVMLQLEGSPISVSSNSV 352

Query: 241 VHEPLACSSTLLTP 255
           VHEPLACSSTLLTP
Sbjct: 353 VHEPLACSSTLLTP 366

[Close]

BLAST of Sed0015287 vs. ExPASy TrEMBL
Match: A0A1S3BJB5 (uncharacterized protein LOC103490312 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490312 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.1e-115
Identity = 213/254 (83.86%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILR+DGEDLLEFIN  AYEPEM+  FS+I    GSL DYIVKAFENLTV
Sbjct: 1   MAAGLKRDPIVILRMDGEDLLEFINSSAYEPEMIATFSEINLPEGSLHDYIVKAFENLTV 60

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           EQGMPPPSD WVMSDI+EPALE CAA ENWD+PVSQE F+ EFKRAAE VA+RLKE+PVI
Sbjct: 61  EQGMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLFEFKRAAEHVAQRLKEQPVI 120

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLSNKFELDKSL TA+QSVP+DKTGKL KEHLQLALDLVAPLAGL
Sbjct: 121 VAHSENTFDGSSIRRLLSNKFELDKSLNTALQSVPRDKTGKLPKEHLQLALDLVAPLAGL 180

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL +LD+M K L+DVFKMVDA+DGK V+EDEFKKLLTEILGAVMLQLE +PISVSSNSV
Sbjct: 181 PPLGALDEMDKLLLDVFKMVDADDGKVVKEDEFKKLLTEILGAVMLQLEGSPISVSSNSV 240

Query: 241 VHEPLACSSTLLTP 255
           VHEPLACSSTLLTP
Sbjct: 241 VHEPLACSSTLLTP 254

[Close]

BLAST of Sed0015287 vs. ExPASy TrEMBL
Match: A0A1S3BIQ3 (uncharacterized protein LOC103490312 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490312 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.1e-115
Identity = 213/254 (83.86%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERSGGSLRDYIVKAFENLTV 60
           MA GLKRDPI+ILR+DGEDLLEFIN  AYEPEM+  FS+I    GSL DYIVKAFENLTV
Sbjct: 113 MAAGLKRDPIVILRMDGEDLLEFINSSAYEPEMIATFSEINLPEGSLHDYIVKAFENLTV 172

Query: 61  EQGMPPPSDPWVMSDIVEPALEWCAAKENWDRPVSQETFMLEFKRAAEWVARRLKEKPVI 120
           EQGMPPPSD WVMSDI+EPALE CAA ENWD+PVSQE F+ EFKRAAE VA+RLKE+PVI
Sbjct: 173 EQGMPPPSDSWVMSDIIEPALESCAAGENWDKPVSQEIFLFEFKRAAEHVAQRLKEQPVI 232

Query: 121 VAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLAGL 180
           VAHSENTFDGS IRRLLSNKFELDKSL TA+QSVP+DKTGKL KEHLQLALDLVAPLAGL
Sbjct: 233 VAHSENTFDGSSIRRLLSNKFELDKSLNTALQSVPRDKTGKLPKEHLQLALDLVAPLAGL 292

Query: 181 PPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSNSV 240
           PPL +LD+M K L+DVFKMVDA+DGK V+EDEFKKLLTEILGAVMLQLE +PISVSSNSV
Sbjct: 293 PPLGALDEMDKLLLDVFKMVDADDGKVVKEDEFKKLLTEILGAVMLQLEGSPISVSSNSV 352

Query: 241 VHEPLACSSTLLTP 255
           VHEPLACSSTLLTP
Sbjct: 353 VHEPLACSSTLLTP 366

[Close]

BLAST of Sed0015287 vs. TAIR 10
Match: AT4G38810.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-81
Identity = 149/253 (58.89%), Postives = 196/253 (77.47%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERS-GGSLRDYIVKAFENLT 60
           MA GLKRDPI+ILR+DGEDL EF++GP YE E +  FS++  S   SLRD IVKA ++L+
Sbjct: 1   MAAGLKRDPIVILRMDGEDLSEFVHGPGYEIESISVFSELSSSKDASLRDCIVKALQSLS 60

Query: 61  VEQGMPPPSDPWVMSDIVEPALEWCAAKEN-WDRPVSQETFMLEFKRAAEWVARRLKEKP 120
           V+ GMPP +DPWVMS+IVEP ++ C  +E+  ++  SQE F+  FKR  E VA+RL E+P
Sbjct: 61  VDHGMPPSNDPWVMSNIVEPIVDSCLDEEDKREKSASQERFLEAFKRVVESVAQRLNEQP 120

Query: 121 VIVAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLA 180
           VIVAHSENTFDGSGIRRLLSNKFE DK+L  A++++PKD+ GK+SK +L+  LD VAP A
Sbjct: 121 VIVAHSENTFDGSGIRRLLSNKFEFDKALNVAMETIPKDRQGKVSKGYLRAVLDTVAPSA 180

Query: 181 GLPPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSN 240
            LPP+ ++ QM   +++  KMV+ +DG  V+E+EFKK + EILG++MLQLE +PISVSSN
Sbjct: 181 TLPPIGAVSQMDNMIMEALKMVNGDDGNVVKEEEFKKTMAEILGSIMLQLEGSPISVSSN 240

Query: 241 SVVHEPLACSSTL 252
           SVVHEPL  ++ L
Sbjct: 241 SVVHEPLTSATFL 253

[Close]

BLAST of Sed0015287 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-81
Identity = 149/253 (58.89%), Postives = 196/253 (77.47%), Query Frame = 0


Query: 1   MATGLKRDPIIILRIDGEDLLEFINGPAYEPEMVDAFSQIERS-GGSLRDYIVKAFENLT 60
           MA GLKRDPI+ILR+DGEDL EF++GP YE E +  FS++  S   SLRD IVKA ++L+
Sbjct: 111 MAAGLKRDPIVILRMDGEDLSEFVHGPGYEIESISVFSELSSSKDASLRDCIVKALQSLS 170

Query: 61  VEQGMPPPSDPWVMSDIVEPALEWCAAKEN-WDRPVSQETFMLEFKRAAEWVARRLKEKP 120
           V+ GMPP +DPWVMS+IVEP ++ C  +E+  ++  SQE F+  FKR  E VA+RL E+P
Sbjct: 171 VDHGMPPSNDPWVMSNIVEPIVDSCLDEEDKREKSASQERFLEAFKRVVESVAQRLNEQP 230

Query: 121 VIVAHSENTFDGSGIRRLLSNKFELDKSLKTAVQSVPKDKTGKLSKEHLQLALDLVAPLA 180
           VIVAHSENTFDGSGIRRLLSNKFE DK+L  A++++PKD+ GK+SK +L+  LD VAP A
Sbjct: 231 VIVAHSENTFDGSGIRRLLSNKFEFDKALNVAMETIPKDRQGKVSKGYLRAVLDTVAPSA 290

Query: 181 GLPPLDSLDQMGKRLVDVFKMVDANDGKAVEEDEFKKLLTEILGAVMLQLESNPISVSSN 240
            LPP+ ++ QM   +++  KMV+ +DG  V+E+EFKK + EILG++MLQLE +PISVSSN
Sbjct: 291 TLPPIGAVSQMDNMIMEALKMVNGDDGNVVKEEEFKKTMAEILGSIMLQLEGSPISVSSN 350

Query: 241 SVVHEPLACSSTL 252
           SVVHEPL  ++ L
Sbjct: 351 SVVHEPLTSATFL 363

The following BLAST results are available for this feature:

BLAST of Sed0015287 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886819.1	1.4e-117	85.55	uncharacterized protein LOC120077051 isoform X1 [Benincasa hispida]	[more]
XP_038886820.1	1.4e-117	85.55	uncharacterized protein LOC120077051 isoform X2 [Benincasa hispida]	[more]
XP_022136155.1	2.3e-115	84.38	uncharacterized protein LOC111007917 [Momordica charantia]	[more]
XP_008447994.1	1.5e-114	83.86	PREDICTED: uncharacterized protein LOC103490312 isoform X2 [Cucumis melo]	[more]
XP_008447993.1	1.5e-114	83.86	PREDICTED: uncharacterized protein LOC103490312 isoform X1 [Cucumis melo] >KAA00...	[more]

BLAST of Sed0015287 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C333	1.1e-115	84.38	uncharacterized protein LOC111007917 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3CLV7	7.1e-115	83.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U809	7.1e-115	83.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BJB5	7.1e-115	83.86	uncharacterized protein LOC103490312 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BIQ3	7.1e-115	83.86	uncharacterized protein LOC103490312 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0015287 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38810.1	2.3e-81	58.89	Calcium-binding EF-hand family protein	[more]
AT4G38810.2	2.3e-81	58.89	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34574:SF2	CALCIUM-BINDING EF-HAND FAMILY PROTEIN	coord: 1..254
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..254
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 201..213
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 188..223 score: 8.599581
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 144..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015287.1	Sed0015287.1	mRNA
Sed0015287.2	Sed0015287.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding