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Sed0015284 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAACAGGGCTATTCGCCGCTTCCATCGCCGCCGCCACCGCCATGTCACCTCCGCCGTCGGCCTCCCCGAAAACCACCGTCTCCGATCAGGTAAAAATACCACAAATTAATTCCCACCCATTTATTTATAAATCTCAAAGCTCTCTTTAGAATCAAATAACCCACGTGGGACAAATCATTTTCAGGAAAACAGAGACGGGGAAATTAGTCCGGCGAGAAGATCGGTGGCGGCGGCGGCGGTTCAGTTTGCTCCGAGATTCGATGGGTTGCGGTTCATTGAAACTCTGGTCGCGGCTCATAGATGA ATGAAGAAAACAGGGCTATTCGCCGCTTCCATCGCCGCCGCCACCGCCATGTCACCTCCGCCGTCGGCCTCCCCGAAAACCACCGTCTCCGATCAGGAAAACAGAGACGGGGAAATTAGTCCGGCGAGAAGATCGGTGGCGGCGGCGGCGGTTCAGTTTGCTCCGAGATTCGATGGGTTGCGGTTCATTGAAACTCTGGTCGCGGCTCATAGATGA ATGAAGAAAACAGGGCTATTCGCCGCTTCCATCGCCGCCGCCACCGCCATGTCACCTCCGCCGTCGGCCTCCCCGAAAACCACCGTCTCCGATCAGGAAAACAGAGACGGGGAAATTAGTCCGGCGAGAAGATCGGTGGCGGCGGCGGCGGTTCAGTTTGCTCCGAGATTCGATGGGTTGCGGTTCATTGAAACTCTGGTCGCGGCTCATAGATGA MKKTGLFAASIAAATAMSPPPSASPKTTVSDQENRDGEISPARRSVAAAAVQFAPRFDGLRFIETLVAAHR Homology
BLAST of Sed0015284 vs. NCBI nr
Match: XP_038888462.1 (uncharacterized protein LOC120078298 [Benincasa hispida]) HSP 1 Score: 77.8 bits (190), Expect = 4.2e-11 Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Sed0015284 vs. NCBI nr
Match: XP_023554654.1 (uncharacterized protein LOC111811842 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 75.1 bits (183), Expect = 2.7e-10 Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Sed0015284 vs. NCBI nr
Match: XP_022969313.1 (uncharacterized protein LOC111468357 [Cucurbita maxima]) HSP 1 Score: 74.3 bits (181), Expect = 4.7e-10 Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of Sed0015284 vs. NCBI nr
Match: KGN43613.1 (hypothetical protein Csa_020428 [Cucumis sativus]) HSP 1 Score: 73.9 bits (180), Expect = 6.1e-10 Identity = 55/80 (68.75%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of Sed0015284 vs. NCBI nr
Match: XP_022952670.1 (uncharacterized protein LOC111455296 [Cucurbita moschata] >KAG6572361.1 hypothetical protein SDJN03_29089, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011972.1 hypothetical protein SDJN02_26880 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 73.6 bits (179), Expect = 7.9e-10 Identity = 51/79 (64.56%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of Sed0015284 vs. ExPASy TrEMBL
Match: A0A6J1I0M0 (uncharacterized protein LOC111468357 OS=Cucurbita maxima OX=3661 GN=LOC111468357 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.3e-10 Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of Sed0015284 vs. ExPASy TrEMBL
Match: A0A0A0K2C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047970 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-10 Identity = 55/80 (68.75%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of Sed0015284 vs. ExPASy TrEMBL
Match: A0A6J1GMF4 (uncharacterized protein LOC111455296 OS=Cucurbita moschata OX=3662 GN=LOC111455296 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.8e-10 Identity = 51/79 (64.56%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of Sed0015284 vs. ExPASy TrEMBL
Match: A0A5D3C7A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003450 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.0e-10 Identity = 52/80 (65.00%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of Sed0015284 vs. ExPASy TrEMBL
Match: A0A1S3TD90 (uncharacterized protein LOC106754239 OS=Vigna radiata var. radiata OX=3916 GN=LOC106754239 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-06 Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of Sed0015284 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 2.7e-08 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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