Sed0015186 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGGAGCTCAGGCCCTGATGAAGAGGATTCCTCGCATCAACTTCCCCAAACGCCATTCTGGTCCGCCTCCCTCTTCCCCTTTTCTTCTCATTGCTTTCATCGATCATGATTTTTCTGAAACAGACCAAATCCTTTCTACCCATATGAAAAAATCTTCGCTTTTTTTTTTTCGTTTTAATCGCTGGTGTTTGTATTTGATTATTCGTGTTAGGATCCCACTATTGTGGCAGGTTGTAAACGTAGAGTTTTCCAAGCATTTATTTATTTTTTACCATTACTCATCTCATCGTCAATTGATTTTGGAATGGATATCACATTATCTAATATAGTATTTAGTCCCCAAGGGGTGACGCAGTGGTTGAAAATTTGGGTTTTGAGGGTGTGCTCCTCTCAAGTCTCGGGTTCGAGACTCACCTGGGACATTACTCTTTCGATGTTTCCGGTGCTTAGCCTAGGGACGAGTGTAGTTACCCTTGTTTCAAAAGTATAAGAATTAGATTAAATCCAAACAAGTATTCAATCAATTAAATCCAAACGAAATTGTGATATGATTGATGAACCCAAAAAGGATAACATCTCGAATGTGCATGTTAAGATCCCACTATTATTCCATGTTTCAAAAGTGGAGAGTCGTCTGCCAACAAGAGCAGAAGGTGGTCTTGGGTTTGAGTTCCATCCACCCCCAATTTTTATAATTTCAAAAAAAATAAAATAAAATGGAGAGTGGTCAGAACATTTATAAGATGTATAGGCTATGGATACCTATACTATTTAATAGTTCTTTAGTTTTGGACTTGTTCTTTGGCCTGACCTGTATTTATGGCTGTGATTTCATTTTTGTGTGGTTTCTTTTATATTGCTTGGAGTTGGCCTTTTTTTCTCTCTAGCATGGTTAGATGCTTGGTTGTCGGTATCGGATTTTATTTGATTTCTAGCTTGTTTTAGCTTGTTAATGGAGAACCTGGTGGAGTTATGTGGACTAATTATATTTGTTTTTTTCATGTTTGGATTTCATTTTGTTAATCTGGATTTTGAAAGGTAATGAAACAGATTAGAGTGGAACTTGATTCAAAGAATGGGGAGGGATAAGTTTTGTGCGAATTTCAATTTATTTTTTGATAACTGCAAAATTGGAGCCTTGTTCTTCTCATATATTGGGTATACATGTGCCCGCCCTAAGGCCCGGACTTGAAAGACACTTAGAGTTTCTATTTTTAGGCGTCGCTCACCCTATGTCTCGAAACGGAGACCTCTAAGTTAGTGTGGCCAAGAGACCACATACCCTTACCAATGAGAGGCTGATAGGTTTTTTATTTGATGAGGTTTTTTTTTGTGAAATAAGAAACAATTATTTGATGAGGTTTATATGAGAGGGAGATTGATTGTTTATACTTTTTCTGCTTCTGTTATGACATCTAAGGACTGCACTTGGAATGCTTAGAATTGAGGCTCAAGTGCTACCTATTTTTTAGAATCCCTTCTATGTATTTTTTTTTAAACAAGGGTAACCACGCCCGTTCCTAGAACAGGCACTGGGAGACATCGAAGGAGTAATGTCACAATTGAGTCTCGAACCTGCGACCTTGAGGGAGCATACCCTCAAAACCCAAGGCTTTAACCACTATGCGACCCCTTGGGGACAGAAACCCTTCTATGTATTTCTATGCCTATTTTAGAATGTCTCTCCAATTCCAGATAAAACACAAAATCGATTTGCCACTTATTTCTTAACTTCTTTTATGGTACATTTATATTTGGGGTTGGAGATTCAAATTCACAGTCATGACCTCTAGAGTGAAGATACATGCAAATTACCGCTAGACTCGGCCCGGTTTGACAGAAAAAGGAAGAGCTAGGAAAATGTATTAGAGTTTTATATTGTTGCTAACTTGTTTTAATCGACACCATCCCTCCGCGATCGTTAACAAGTTGAAATGTCTTATTATAATTTATATCATCAATTGTTGAATTATGTCTTGGTGATATGTTTACTAAAGTTATCTGCCAGTCATAGTAAATACTGAAGAAAGTTTTGCAGGTTCTACTTCCAAGACTCCATCAAGCAGTGGGGTGGATGATCAAATTTTCTTCTCATCTTTAAATGAAAATGCATCCAAAACTTATGGAGGAAAAGCTTCCCTTCAGCCTAAAAGGATTCCATTGTCCAATGAGGAGATTGAAGCTATTTTGGTAATAGAACCTTTTCCTATATTTGGTTGTTGCTTTTTACTGATTGTTCAATTTGTGCTCCAAGCATTCAATTTGAACTTTGCTTGTTGCAAGAAAGGAAATAAATCACCATGAGATTCAAACCTTAAAAAAATCCAAATTAATGATTAGCGAGTCGGAAGCATGAGCCATTTGTTTGTGATTTAGAAAGTCATCTTTTGTTGGCCTGGTGGTTAAAAACTCAAAAGGAATTTTGGAAACTAAGAGTTTTTTAGTTCAATCCTGGTCGTCTTCTATGTAGAAATTATTTTTTTATGGAATTTCTTTAACATCCAAATATTCAAAAATCAGGTAGTATGTCCAAACACTTCCGGATAAATAAAAAATAGTTTGTGAACGAGGACGAAGAGTTGATGTTTTTTCCTCCAGTATTATATATATTTCAGTTAGATATTAACTTTTTGCATGTTGATGTAAATAATAAAAGGAGAAAATAAGTGCAAGTCATGGTGATCATGTAACTTACCCAGTGTTTTAAAAAGCGCAAAGCACACTAAGGCGCAATGGCCCTCTGGAGCCTGAGGTGCAAGGCGCACCAAAAGGCGAGGGCTTTTTTACATAAGGCGCACTATATAAAAAAAACACAAAAAATATATATATATGTGTGTGTGTGTGTATACACAATAAAAACATTTCCATAGATATAAATGAAGTTTTAACCAAGAATAATATATAAAACATACATTACATTTAACTATTAACCTTCATTCATGAGTAGAAATGAAGTTTAACAAAGAATCTATACAAAACATACATAAGATTCAACCATTAACCTTTCATTTTAAGCGAATGTTGTCTATGTGAGTTAAAAAATTAAGTTATTTAAGGCATTAAAATGTCTTGAATCAGTTATGTTGCGCTTCGAATGGCTAGTACGGGGGTCTCGCGCGCCTTTTGGTGTATGAGTATTATATGCTTCTCAAGGTTTGTTTAGACAATCATCGATATAGAAAGATAAGAATAAGTAAATTTAGTTAAGATGAGTAGTTGTATGATAGGGAGTAGTAGAAAATAAAGAGTTGAAGTATATTAATTACCATTATTTTATAAATATTTTTTTTTAGAATTTCATTTTAAATTACGATTTTAGTCTTTATTTATTTGATTATATTAATAATCATCGTAACCATTATGAATTAATTTAATAGTCAACAAGTATCATAAATAATTGAGAAATGATGAGTTTAATTTATAATGACTATTTATCTATAAATTAATATTTTATATAAAAAAAATTGACATTAAAATATTAATAATTTTAAGATAATTACTTTTTTTTAATCAACAAATGAAGGGGATTTAATCATATAAATTCTTGATTATTAAATTACTATTTGAGTTCTACTTTTTTTTCTTTTCTGAATTACTGGGTTATACTTTTTATTAAACATTTAAAATTTAAAAAATTGAATCAACCACTCTTTAATTATTAGATTATACATCATCTTGATAGAATTATAATCAAGTAATATTCTTGTTGAGAATGATGACTTTTCAATATAATTCATAACATTATTGTTTATTTACAAGTTTTAAGTTGTAACACTAAAATGATGAAAATAAAATAATTAATTTTGATATTTAAATATTGTAGAGTGACGTGGGCTTCCATAGTAAGTAATTTTAAAAACTAAACAAGCATATAATCGAAAAGAAAAGATAGGAATCCATTGGCTTTCCCTATTCAAAATTAAACCTTATGATATACAAATCCCTAATGAAACCTAAACAATCAAAATTAATCCAAAATTTGAAACAATGCTAATTGGAGGGGCAAAATGGTATTTACAACGACAATATCGTGAGAAGAACACAACAAGAATCTAACGAGACCACATTTCGTGAACTACACAGCTCATCTCTCAACACAGGTGCGAAAATTTTCATCTTCTTTTCTCCTTTTATGATTCGTGTTGAATTCTGGAATCTGCCCTGAAATTCATTAGGATCATTTTTTGTTTAAGCAATTGTCTGTTTGTTGGGTGGAGATGAACTAATTAATCACTGCACATTCGAATTCAGCGATGGAAATCCTTGCTTTTTTTTTTCTGATTTTCTGTTTACGAACACCATTCTCTTGTTCTAGTAAAACGATGGTGATTTCTGGGTTTTATGGGCTTTTTGAGATTTGGTTGAATCGAAAGTTCTTCTGCTAACCCTACTTCTGAGTTAAGAATTGGGTGATTTAGGTGGGTCATGATCTGAGACAAATTTGATGATTGCTAATTGTATAGAACAATTAGTTAGTGCATGATAGTGAAGGAATATTAGTTAGGGCATGATTGGTCCCCAAGGAGTGGGACAGTGGTTGAAGATTTGGGTTTTAAAAATATGCTCCCTTCAAGATCTCAAGTTCGAAATTCGGTAACATTATTCTTCGATGTCTCCTGGTGCCTGGCCTAGAGATGGGCGTGATTACCCTTGTTTCAAAAAAAAAAAGTTAGGACATGATTGATAATGGCCTCCTTTTTAGTTTAAAAAAATATACTTCTTCAGATATGTTTTTTTTTTAATCTTTTGTCAATATAGTCAAATGATAGAAGAATTTTTTTTAAAAAACTACTAAATTTGAATCTTTTAACATAGTACTCAGTGAAACATTCCATATGGCTTAGAAGATTCATGACATACTGTTGCTGAGTTAAATGCAAGCTTAATTTTTTAAACATTAAAGTAAAAATCAAATGGTTATCGAACGGACATTTTTTGTAATTCGACAATGTTTGGGAGTGATGAATTTGAACCTATAACCTCTTGGTTATCACGTCATGCATCATGCGAACTGAACTCAACTCTTGTTATCACTTTCTTCGGAAGTTTCTACGCTAGAGCTCATAAGTCGGACCTTATCGTACCCTCATACCCTTTGATTTTACTTGGATTTTATACAAATGTCTGATGGTGTTTCCGAGGTTGACTTTGTGGTCTTTCCTCCTCTTCCCCTAGTGATATTGATGATGAACTCTTAATTTCTTATTTGCATTTATATATTCTGTACGCTGTAGTTGTGCTACTGA ATGGGCGGAGCTCAGGCCCTGATGAAGAGGATTCCTCGCATCAACTTCCCCAAACGCCATTCTGGTTCTACTTCCAAGACTCCATCAAGCAGTGGGGTGGATGATCAAATTTTCTTCTCATCTTTAAATGAAAATGCATCCAAAACTTATGGAGGAAAAGCTTCCCTTCAGCCTAAAAGGATTCCATTGTCCAATGAGGAGATTGAAGCTATTTTGTTGTGCTACTGA ATGGGCGGAGCTCAGGCCCTGATGAAGAGGATTCCTCGCATCAACTTCCCCAAACGCCATTCTGGTTCTACTTCCAAGACTCCATCAAGCAGTGGGGTGGATGATCAAATTTTCTTCTCATCTTTAAATGAAAATGCATCCAAAACTTATGGAGGAAAAGCTTCCCTTCAGCCTAAAAGGATTCCATTGTCCAATGAGGAGATTGAAGCTATTTTGTTGTGCTACTGA MGGAQALMKRIPRINFPKRHSGSTSKTPSSSGVDDQIFFSSLNENASKTYGGKASLQPKRIPLSNEEIEAILLCY Homology
BLAST of Sed0015186 vs. NCBI nr
Match: XP_038875405.1 (uncharacterized protein LOC120067868 [Benincasa hispida]) HSP 1 Score: 119.0 bits (297), Expect = 1.7e-23 Identity = 65/76 (85.53%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of Sed0015186 vs. NCBI nr
Match: XP_008437426.1 (PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo]) HSP 1 Score: 115.2 bits (287), Expect = 2.5e-22 Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of Sed0015186 vs. NCBI nr
Match: XP_023534508.1 (uncharacterized protein LOC111796047 [Cucurbita pepo subsp. pepo] >KAG6605594.1 hypothetical protein SDJN03_02911, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.5 bits (280), Expect = 1.6e-21 Identity = 61/76 (80.26%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Sed0015186 vs. NCBI nr
Match: XP_004143853.1 (uncharacterized protein LOC101205349 [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21 Identity = 61/76 (80.26%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Sed0015186 vs. NCBI nr
Match: KAG7035504.1 (hypothetical protein SDJN02_02300 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.1 bits (279), Expect = 2.1e-21 Identity = 60/78 (76.92%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of Sed0015186 vs. ExPASy TrEMBL
Match: A0A1S3AUJ6 (uncharacterized protein LOC103482844 OS=Cucumis melo OX=3656 GN=LOC103482844 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22 Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of Sed0015186 vs. ExPASy TrEMBL
Match: A0A0A0KMD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148700 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.0e-21 Identity = 61/76 (80.26%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Sed0015186 vs. ExPASy TrEMBL
Match: A0A6J1K8D8 (uncharacterized protein LOC111491585 OS=Cucurbita maxima OX=3661 GN=LOC111491585 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.7e-21 Identity = 60/76 (78.95%), Postives = 64/76 (84.21%), Query Frame = 0
BLAST of Sed0015186 vs. ExPASy TrEMBL
Match: A0A6J1H0Q6 (uncharacterized protein LOC111459363 OS=Cucurbita moschata OX=3662 GN=LOC111459363 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.7e-21 Identity = 60/76 (78.95%), Postives = 64/76 (84.21%), Query Frame = 0
BLAST of Sed0015186 vs. ExPASy TrEMBL
Match: A0A6J1DS43 (uncharacterized protein LOC111023342 OS=Momordica charantia OX=3673 GN=LOC111023342 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 6.9e-18 Identity = 55/76 (72.37%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of Sed0015186 vs. TAIR 10
Match: AT4G23885.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 6.6e-13 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Sed0015186 vs. TAIR 10
Match: AT5G24165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 5.2e-10 Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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