Sed0015152 (gene) Chayote v1

Overview


Name	Sed0015152
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L6
Location	LG07: 5064406 .. 5066349 (-)
RNA-Seq Expression	Sed0015152
Synteny	Sed0015152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCCAAAAACCCTAGAATTACCAGAAACCCGGATGTCATCCGAGGCGTTGGCAAGTACTCAAGGTCGAAGATGTATCACAAGCGAGGTCTCTGGGCCATCAAGGCCAAAAATGGCGGAGTCTTCCCTCGCCACGATGCCCACCCGAAATCTGATGCCGTAGCTGAGAAACCACCCAAGTTTTACCCCGCCGACGATGTCAAGAAGCCCCTTGTTAACAAGCGCAAGGCTAAGCTCACCAAGTTGAGGTATATGGTATGCTATGGTGTCTCCATTTGTTTGATGTTCAAACGAATTCTGTTTAATTTTTGCGTTGTTTGATGAAATCTGGTTCTGGGATGGGATCCATGTTAACTACTTATGCCCTTGTTGGTGTGCATTGTTTAGTGAATGTTTTTTTTTTTAAAAAAAATATTTGGTCTGTTCTTGATTTTAGAGCTGGCATTACTCCCGGTACTGTGTTGATTGTCCTTGCTGGGAGATTCAAGGGGAAGAGAGTTGTGTTTTTGAAGCAGCTTCCTTCTGGTTTGCTTCTTGTTACTGGTGAGTTCCCTTGTTTCCTTCTCAGACTTGGCCAGGCCTTACAACGTCTGAACTTTGGTGAAATTTTTATGATGTTCCATGGTTTTTTTAATTTGATTTGGATAGCCTTCTACATTTAGGTCCCGGTTGATAACCATTTCGTTTTTTTGTTTTTGGTTTATGAAATTTAAGCTTATTTCTACTCAAATTTCTAGCATATCCATATTTCCTTAAGAAAGTAGGTGAATACTAACCAAATTTCAAAAACATAAACAAGCTTTTAAAAGCTACTTTTTTTTATTTCCAAATTTTGGTTTTGTTTATTAAAATATAGGTAAGAGGTGGATATCCAAATAAGGAAAAAAGTATAGTAAGGTAGTTGTTGTTGGCTTAAGTTTCAATAAACAAGAAACGAAAAACAAAAAGATTATCAAACTGGACCTTATTATTTGATTTTGATAGGAAGATTATTGTGATTCTAATTTGTTTCCATCTTTTGATGTCATTTGTTTTATTTTTGTCTGTAATTTATACTTTGTGATAATGGGTTTTGGTTATTTTTCTTAGTAAGAAGTTCTTGACGAAGTATAAGTCATTTCTTAGCTGCCAACTCCAAGCATTTCCTTGATGTAATGCTTGCATTTTTAAAGTTGTCTGATTGAGTTTGGTTTGGTGTCCCTTAGAATGTAAATGTTGGTCTTTACTTCAGCCTGCGGGCTGTGAGTGATCTGCTGGGGAAGTTCTTCTATGGTTTACTTTCAACCAGAAATTCCAGAAGATGATTAGTTCTTTTCATTACAACATGTGTACACACTTTAAGTGTTAGCCATGTTCCTTATCTGTTTGCTCGGAAGTTTTCGACGATGAAGCTTGGATTTAGCATTCGATTTGATTAGTTTGTGTAGAAATAGAACACCAACTCACGTCAGCTTTTGATTTCTATTGAAAATGGATGTACTTTTAAACAGCACTATAACATGTTCTTCATGACTATAGGACCTTTCACGATTAATGGCGTTCCTTTAAGACGGGTAAACCAATCGTACGTGATTGCAACTTCCACCAAGGTTGACATCTCTGGAGTCAATGCAGAAAAGTTCGACGACAAGTATTTCTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGAGCGAAGGCGAATTCTTCGAGGCAGAGAAAGAGGTAGGAGTACCTGGATTGTTTGTCTATCCCCTCATCGTTTTATCTTTTTTGGCAATTGTAATTAATCGATTCGAACCTATTGTAGGAGAAAAGTGCCCTCCCAGCTGACAAGAAGGATGACCAGAAAGCTGTGGATACTCAATTGATAAAGTCTATTGAAGCTGTTCCAGAGCTGAAGGCATACTTGGCAGTAAGGTATTCTCTCAAGTCAGGAATGAAACCTCATGAGCTTGTCTTTTAG

mRNA sequence

ATGGCGCCCAAAAACCCTAGAATTACCAGAAACCCGGATGTCATCCGAGGCGTTGGCAAGTACTCAAGGTCGAAGATGTATCACAAGCGAGGTCTCTGGGCCATCAAGGCCAAAAATGGCGGAGTCTTCCCTCGCCACGATGCCCACCCGAAATCTGATGCCGTAGCTGAGAAACCACCCAAGTTTTACCCCGCCGACGATGTCAAGAAGCCCCTTGTTAACAAGCGCAAGGCTAAGCTCACCAAGTTGAGAGCTGGCATTACTCCCGGTACTGTGTTGATTGTCCTTGCTGGGAGATTCAAGGGGAAGAGAGTTGTGTTTTTGAAGCAGCTTCCTTCTGGTTTGCTTCTTGTTACTGGACCTTTCACGATTAATGGCGTTCCTTTAAGACGGGTAAACCAATCGTACGTGATTGCAACTTCCACCAAGGTTGACATCTCTGGAGTCAATGCAGAAAAGTTCGACGACAAGTATTTCTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGAGCGAAGGCGAATTCTTCGAGGCAGAGAAAGAGGAGAAAAGTGCCCTCCCAGCTGACAAGAAGGATGACCAGAAAGCTGTGGATACTCAATTGATAAAGTCTATTGAAGCTGTTCCAGAGCTGAAGGCATACTTGGCAGTAAGGTATTCTCTCAAGTCAGGAATGAAACCTCATGAGCTTGTCTTTTAG

Coding sequence (CDS)

ATGGCGCCCAAAAACCCTAGAATTACCAGAAACCCGGATGTCATCCGAGGCGTTGGCAAGTACTCAAGGTCGAAGATGTATCACAAGCGAGGTCTCTGGGCCATCAAGGCCAAAAATGGCGGAGTCTTCCCTCGCCACGATGCCCACCCGAAATCTGATGCCGTAGCTGAGAAACCACCCAAGTTTTACCCCGCCGACGATGTCAAGAAGCCCCTTGTTAACAAGCGCAAGGCTAAGCTCACCAAGTTGAGAGCTGGCATTACTCCCGGTACTGTGTTGATTGTCCTTGCTGGGAGATTCAAGGGGAAGAGAGTTGTGTTTTTGAAGCAGCTTCCTTCTGGTTTGCTTCTTGTTACTGGACCTTTCACGATTAATGGCGTTCCTTTAAGACGGGTAAACCAATCGTACGTGATTGCAACTTCCACCAAGGTTGACATCTCTGGAGTCAATGCAGAAAAGTTCGACGACAAGTATTTCTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGAGCGAAGGCGAATTCTTCGAGGCAGAGAAAGAGGAGAAAAGTGCCCTCCCAGCTGACAAGAAGGATGACCAGAAAGCTGTGGATACTCAATTGATAAAGTCTATTGAAGCTGTTCCAGAGCTGAAGGCATACTTGGCAGTAAGGTATTCTCTCAAGTCAGGAATGAAACCTCATGAGCTTGTCTTTTAG

Protein sequence

MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPPKFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTGPFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKEEKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF

Homology

[Close]

BLAST of Sed0015152 vs. NCBI nr
Match: XP_022959727.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >XP_023513505.1 60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo] >KAG6593324.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025671.1 60S ribosomal protein L6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 418.3 bits (1074), Expect = 4.3e-113
Identity = 213/231 (92.21%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+DA  EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSYVIATSTKV+ISGVN EKFDDKYFSKEVQKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEISGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPADKKDDQKAVDT LIKSIE VPELKAYLA R+SLKSGMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELAF 231

[Close]

BLAST of Sed0015152 vs. NCBI nr
Match: XP_023004644.1 (60S ribosomal protein L6-1-like [Cucurbita maxima])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 212/231 (91.77%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+DA  EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSYVIATSTKV+ SGVN EKFDDKYFSKEVQKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEFSGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPADKKDDQKAVDT LIKSIE VPELKAYLA R+SLKSGMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELTF 231

[Close]

BLAST of Sed0015152 vs. NCBI nr
Match: XP_022991926.1 (60S ribosomal protein L6-1-like [Cucurbita maxima])

HSP 1 Score: 414.8 bits (1065), Expect = 4.7e-112
Identity = 212/231 (91.77%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+DA AEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSY IATSTKVDISGVNAEKFDDKYFSKEVQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPAD+KDDQKAVDT LIKSIE VPELKAYLA R+SLK+GMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Sed0015152 vs. NCBI nr
Match: XP_011659463.1 (60S ribosomal protein L6-1 [Cucumis sativus] >KGN45157.1 hypothetical protein Csa_015877 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 4.7e-112
Identity = 212/231 (91.77%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+ A AEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSYVIATSTKVDISGVN+EKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPA+KKDDQKAVDT LIKSIEAVPELKAYL  R+SLK+GMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Sed0015152 vs. NCBI nr
Match: XP_038896966.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 414.5 bits (1064), Expect = 6.2e-112
Identity = 211/231 (91.34%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+DA  EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPTEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KLTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSYVIATSTKVDISGVN+EKFDDKYFSKEVQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKS LPADKKDDQ+AVDT LIKSIEAVPELKAYL  R+SLK+GMKPHELVF
Sbjct: 181 EKSGLPADKKDDQRAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Sed0015152 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.5e-100
Identity = 184/230 (80.00%), Postives = 201/230 (87.39%), Query Frame = 0


Query: 2   APKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPPK 61
           A + P++ RNPD+IRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA PK DA  EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+A ITPGTVLI+LAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKEE 181
           F INGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KKKKK+EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           K  +P +KK+DQK VD  LIKSIEAVPELK YL  R+SL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Sed0015152 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 8.1e-99
Identity = 184/228 (80.70%), Postives = 199/228 (87.28%), Query Frame = 0


Query: 4   KNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPPKFY 63
           + P++ RNPD+IRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA  K DA  EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTGPFT 123
           PA+DVKKPL N+R AK TKLRA ITPGTVLI+LAGRFKGKRVVFLKQL SGLLLVTGPF 
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K  +KKKKK+EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YL  R+SLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Sed0015152 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.5e-97
Identity = 182/228 (79.82%), Postives = 197/228 (86.40%), Query Frame = 0


Query: 4   KNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPPKFY 63
           +  ++ RNPD+IRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA  K DA  EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTGPFT 123
           PA+DVKKPL N+R AK  KLRA ITPGTVLI+LAGRFKGKRVVFLKQL SGLLLVTGPF 
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K  +KKKKK+EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YL  R+SLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Sed0015152 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-97
Identity = 177/228 (77.63%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 4   KNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPPKFY 63
           + P ++RNP+++RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H          EKPPKFY
Sbjct: 7   RKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFY 66

Query: 64  PADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTGPFT 123
           PADDVKKPL+NKRK K TKLRA ITPGTVLI+LAGRFKGKRVVFLKQL SGLLLVTGPF 
Sbjct: 67  PADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFK 126

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVIATSTKVDISGVN EKFDDKYF K+ +KK KK EGEFFEAEK+E +
Sbjct: 127 VNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVN 186

Query: 184 ALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
            LP +KKDDQKAVD  L+K+IE VPELKAYL  R+SLK+GMKPHELVF
Sbjct: 187 VLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of Sed0015152 vs. ExPASy Swiss-Prot
Match: P47911 (60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3)

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-47
Identity = 116/251 (46.22%), Postives = 155/251 (61.75%), Query Frame = 0


Query: 6   PRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAV---------- 65
           P  +RNP ++RG+G+YSRS MY ++ L+  K K      + +   K + V          
Sbjct: 49  PHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKKKKEKVLATVTKTVGG 108

Query: 66  ----------AEKPPKFYPADDVKKPLVNKRKAKLT----KLRAGITPGTVLIVLAGRFK 125
                       K P++YP +DV + L++  K   +    +LR+ ITPGTVLI+L GR +
Sbjct: 109 DKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHR 168

Query: 126 GKRVVFLKQLPSGLLLVTGPFTINGVPLRRVNQSYVIATSTKVDISGVNAEK-FDDKYFS 185
           GKRVVFLKQL SGLLLVTGP  IN VPLRR +Q +VIATSTKVDIS V   K   D YF 
Sbjct: 169 GKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFK 228

Query: 186 KEVQKKKKKSEGEFFEAEKEEKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSL 232
           K+  +K +  EGE F+ EK EK  +   +K DQKAVD Q++  I+AVP+L+ YL  ++SL
Sbjct: 229 KKQLRKPRHQEGEIFDTEK-EKYEITEQRKADQKAVDLQILPKIKAVPQLQGYLRSQFSL 288

[Close]

BLAST of Sed0015152 vs. ExPASy TrEMBL
Match: A0A6J1H5C5 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111460710 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.1e-113
Identity = 213/231 (92.21%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+DA  EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSYVIATSTKV+ISGVN EKFDDKYFSKEVQKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEISGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPADKKDDQKAVDT LIKSIE VPELKAYLA R+SLKSGMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELAF 231

[Close]

BLAST of Sed0015152 vs. ExPASy TrEMBL
Match: A0A6J1KWW3 (60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111497875 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 6.0e-113
Identity = 212/231 (91.77%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+DA  EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSYVIATSTKV+ SGVN EKFDDKYFSKEVQKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEFSGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPADKKDDQKAVDT LIKSIE VPELKAYLA R+SLKSGMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELTF 231

[Close]

BLAST of Sed0015152 vs. ExPASy TrEMBL
Match: A0A6J1JS55 (60S ribosomal protein L6-1-like OS=Cucurbita maxima OX=3661 GN=LOC111488421 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.3e-112
Identity = 212/231 (91.77%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+DA AEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSY IATSTKVDISGVNAEKFDDKYFSKEVQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPAD+KDDQKAVDT LIKSIE VPELKAYLA R+SLK+GMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Sed0015152 vs. ExPASy TrEMBL
Match: A0A0A0K9V0 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.3e-112
Identity = 212/231 (91.77%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+ A AEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSYVIATSTKVDISGVN+EKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPA+KKDDQKAVDT LIKSIEAVPELKAYL  R+SLK+GMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Sed0015152 vs. ExPASy TrEMBL
Match: A0A1S3CEA6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499900 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.0e-112
Identity = 212/231 (91.77%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MAPKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPP 60
           MAPK PR+TRNPD+IRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA PK+   AEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRA ITPGTVLI+LAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180
           PF INGVPLRRVNQSYVIATSTKVDISGVN+EKFDDKYFSKE QKKKKKSEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           EKSALPA+KKDDQKAVDT LIKSIEAVPELKAYL  R+SLK+GMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Sed0015152 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 366.3 bits (939), Expect = 1.8e-101
Identity = 184/230 (80.00%), Postives = 201/230 (87.39%), Query Frame = 0


Query: 2   APKNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPPK 61
           A + P++ RNPD+IRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA PK DA  EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+A ITPGTVLI+LAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FTINGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKEE 181
           F INGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KKKKK+EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
           K  +P +KK+DQK VD  LIKSIEAVPELK YL  R+SL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Sed0015152 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 361.3 bits (926), Expect = 5.8e-100
Identity = 184/228 (80.70%), Postives = 199/228 (87.28%), Query Frame = 0


Query: 4   KNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPPKFY 63
           + P++ RNPD+IRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA  K DA  EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTGPFT 123
           PA+DVKKPL N+R AK TKLRA ITPGTVLI+LAGRFKGKRVVFLKQL SGLLLVTGPF 
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K  +KKKKK+EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YL  R+SLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Sed0015152 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-98
Identity = 182/228 (79.82%), Postives = 197/228 (86.40%), Query Frame = 0


Query: 4   KNPRITRNPDVIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAHPKSDAVAEKPPKFY 63
           +  ++ RNPD+IRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA  K DA  EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRAGITPGTVLIVLAGRFKGKRVVFLKQLPSGLLLVTGPFT 123
           PA+DVKKPL N+R AK  KLRA ITPGTVLI+LAGRFKGKRVVFLKQL SGLLLVTGPF 
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKSEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K  +KKKKK+EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPADKKDDQKAVDTQLIKSIEAVPELKAYLAVRYSLKSGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YL  R+SLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of Sed0015152 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959727.1	4.3e-113	92.21	60S ribosomal protein L6-1-like [Cucurbita moschata] >XP_023513505.1 60S ribosom...	[more]
XP_023004644.1	1.2e-112	91.77	60S ribosomal protein L6-1-like [Cucurbita maxima]	[more]
XP_022991926.1	4.7e-112	91.77	60S ribosomal protein L6-1-like [Cucurbita maxima]	[more]
XP_011659463.1	4.7e-112	91.77	60S ribosomal protein L6-1 [Cucumis sativus] >KGN45157.1 hypothetical protein Cs...	[more]
XP_038896966.1	6.2e-112	91.34	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]

BLAST of Sed0015152 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	2.5e-100	80.00	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C5	8.1e-99	80.70	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
Q9C9C6	1.5e-97	79.82	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
P34091	2.0e-97	77.63	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
P47911	1.5e-47	46.22	60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3	[more]

BLAST of Sed0015152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5C5	2.1e-113	92.21	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111460710 PE=3 SV=1	[more]
A0A6J1KWW3	6.0e-113	91.77	60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111497875 PE=3 SV=1	[more]
A0A6J1JS55	2.3e-112	91.77	60S ribosomal protein L6-1-like OS=Cucurbita maxima OX=3661 GN=LOC111488421 PE=3...	[more]
A0A0A0K9V0	2.3e-112	91.77	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1	[more]
A0A1S3CEA6	3.0e-112	91.77	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499900 PE=3 SV=1	[more]

BLAST of Sed0015152 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	1.8e-101	80.00	Ribosomal protein L6 family protein	[more]
AT1G74050.1	5.8e-100	80.70	Ribosomal protein L6 family protein	[more]
AT1G74060.1	1.1e-98	79.82	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..170 e-value: 1.1E-16 score: 62.6
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 6..59 e-value: 1.4E-13 score: 50.9
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 1.2E-39 score: 135.3
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..193
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 7.83922E-78 score: 229.357
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 87..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015152.1	Sed0015152.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome