Sed0015143 (gene) Chayote v1

Overview


Name	Sed0015143
Type	gene
Organism	Sechium edule (Chayote v1)
Description	amino acid transporter AVT1A-like
Location	LG02: 45710174 .. 45713081 (-)
RNA-Seq Expression	Sed0015143
Synteny	Sed0015143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCATTGGCAAAGAGTATAGAGGAGAGATTACCAGCAAGATTTTCAAATAGCTGCTGGTGTTCCATTCTTATAAGAACTGCACTTGTTATCTCTTCTCTTTGTGTGGCTCTCCTTCTCCCATTTTTTGGTATGTTTTTGGCCTCATAATTTGGTCTCCTAAATAGGTTGAATTAAAAATAGAATTTACCCTCATCGGCACATTCTACCTACCTCTTAGTATTATATTTATAGCACAATTTTTTAAATAATTCATCTGTATAATTTTCTATCACTATAGAACTCAACCAATGATAGAACATTATTTTCTATCAATGATAGAACTCAACCAGTGATAGAGTATAATTTTCTATCAGTAATAGAATTCAACAAGTGATAGAATATTGAGTATACTATTGATTGAATTTTATCATTGATAAAATTCAAGCATTGATAGAATTCAATTTGAATTTTTTCTACTATAAATAAATTAGTTTTAATTTTATGCTATAGATGAACATATTTTAAACTTTTTTGTTATACATGTAGAATCCCCAATTAAAAATTTCACATTGTGGTCTTTAATTATGAATCTATTTTTAAAAGGTAAGGAACACATAGAAAAGACAGAATGGGCAAAATTTCAAAAACCATATTTGAATCAAAATATATATATTAGATAGTTTCTCCAACTAATGTTTCTCATTTAAAAAAAATGAACTGCAGGTCTAGTGATGGCTTTAATTGGTTCCCTTCTCTCCATACTCATTGTAAGTGTCTTCAATCCAATTTTCTTTTCCTTAAAAAAAAAATCAAATGCTAACATTATGGATTAAAAATAGTTCTTGTTTTAGGAAAGTCTAACATCTTGTATGACATAATAAAAAATTCGTTTGGATGTAATTTTTCAAAGAAAAAGTGGTTTTTCTTTAGGAAAAACAAGATTAAATTACACTGATGCCGATGAGCTTCGATTATTGTTTGGTCCATAACTTTTAATTAAAACTATATTTATAGGAGGAAAGCAAAAAGACTTTCCTAGTAGTTAAAGTACATCCAGAACTATCGACTTTCTTCAAAAGTGCTTATCAGTGTAGAAAGAAAAGTATTACATTACAAAATGCTTTTAATCATTTTATCAAAAAGAAAAAGAAAAACTTTGAATCATCAAAATAACTTTTGCATATTATTCTAAGAAAATATCACATTTGGTTCAGGCAATTATAATACCAGCCTCTTGCTTTTTGAAAATCATGGGGAAGGAAGCTTCCAATATACAGGTATGTGTATATTTGCGTTTTTTTAGAAGGATTATCGATTTTATTTATTTATTCTTTTGAAATAGAAGCATGTTTTAGTTTAGTGTGATAGTTTAAAATTAATGACAAGTGTCAATTTAATTAGTTTTATGTGTCCTTTAATTTTTTTAATTGAGTTTTACAAAAAAAAAAATGGAAAATACATTTTTAGTTGATAGGTTTGGGGTCTAGTTTCAATTTGATTAATAAAATTTTAAAATTGAACAATTTTATTTAGAGAAGTTGTGCTAAATAGTCCAATTTCACAAAATACTTGTAGATGTAAGTAAATTTGATTTTGTTTGCATCCATAGTCAAATATATGGTATAATTAATATTCTATCCTACGATATAATTTAGACAGTATTTTGTATTATTATTAATACATTATTATGTATTAATTATGGAATTTTGCATGTATAACAAAAAATGGTAAAATATTTCTATCTATATCACAAAATCAAAACTAATTCAATTGTATCACAAAATTCAAATAGAATTCTATCATCCATAAAATTCAATAAGTGATAAAGTTCTATCAGTGATAAAAAAAATTATATACTATAAATGAATTATTTTCAAAATTATGCTACAAATATAATGTAAGAGGTAAAATAAGCTGTTGATAGTAAATTTCCTATTAATTATACCGTATAATTTGTATATGGTAGGACTATGATTGCTAAATATTTTTTTGTGTAGTATTATAAATAATTTTTCAATTTGGCTTACTCCTAAAAATATCCATTTTTATTTATGACATTTCAATAATACTCATATTTAGTAAAAAATATGTTTGTTAAATAATGGACTAAAATTCACTATATTGATAAAGCAGTTATTTTAGTTTTCACGTAAATTTAATTTTTAAAAGAAAATAAATTAAAAAATCCACTAGGACTAATATAAGCATGTGGTAAAAATGTTAAGTTTAAAGACCCAAAAACTAAAAAGGTAATTTTTCTACAAATAAAATATAGTATTACAGTTAATGGACATAATATTCTAACATCTAAATAACAACAATAATAATAAACGGGTTCAGTTTTAAGATTTTATATTATTTTTTTTATAAATATTTAATTATAAGATTCAATATTGGTAATTACTTACCCTTGTTTAAAAAAAATGGTAATTATTTACTAATATAATTATTTATTACTTTAAACTCTAAAGTTACATGTTCGAACTTGAAAACAGTATTTAGTCTCATATAATTTTAGAGCAATAGTGTCATTTATGTAGGGTTTATTGATCCCCTCCCCTAATATATATACTCAAAATATATATATATAGACTTTGTAAACATTTTTTTTTCTTCTAAACTTACTATGACATAATACACATAAGATTGAAAGTCTTGTTGGTACATGTCTACATGAATCTATTAACCACGACAACTACAACATTCAGGGATTAGCTGGTAATTCAACCTACAATGAAACATTTTTTTAATGGGCTTATTAAAAAAAAATTGAAAAAATTGAAAAAAATCTTATCTTGTGTGTTTGTTGATATGTGGTGCATATAAATCACAGATATTATCATGCAAGGTGGTAATTGTTTTGGGCATCATTGGAGCAATCCTTGGAACATACTCTTCATTTTCACAGCTCATCAGCCAGTGA

mRNA sequence

ATGACTCCATTGGCAAAGAGTATAGAGGAGAGATTACCAGCAAGATTTTCAAATAGCTGCTGGTGTTCCATTCTTATAAGAACTGCACTTGTTATCTCTTCTCTTTGTGTGGCTCTCCTTCTCCCATTTTTTGGTCTAGTGATGGCTTTAATTGGTTCCCTTCTCTCCATACTCATTGCAATTATAATACCAGCCTCTTGCTTTTTGAAAATCATGGGGAAGGAAGCTTCCAATATACAGATATTATCATGCAAGGTGGTAATTGTTTTGGGCATCATTGGAGCAATCCTTGGAACATACTCTTCATTTTCACAGCTCATCAGCCAGTGA

Coding sequence (CDS)

ATGACTCCATTGGCAAAGAGTATAGAGGAGAGATTACCAGCAAGATTTTCAAATAGCTGCTGGTGTTCCATTCTTATAAGAACTGCACTTGTTATCTCTTCTCTTTGTGTGGCTCTCCTTCTCCCATTTTTTGGTCTAGTGATGGCTTTAATTGGTTCCCTTCTCTCCATACTCATTGCAATTATAATACCAGCCTCTTGCTTTTTGAAAATCATGGGGAAGGAAGCTTCCAATATACAGATATTATCATGCAAGGTGGTAATTGTTTTGGGCATCATTGGAGCAATCCTTGGAACATACTCTTCATTTTCACAGCTCATCAGCCAGTGA

Protein sequence

MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ

Homology

[Close]

BLAST of Sed0015143 vs. NCBI nr
Match: XP_038905343.1 (amino acid transporter AVT1A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 177.9 bits (450), Expect = 4.6e-41
Identity = 100/106 (94.34%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLPAR SNS WCSILIRTALVISSLCVALLLPFFGLVMALIGSLL ILIA
Sbjct: 453 MTPLAKSIEERLPARLSNSYWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLCILIA 512

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQL 107
           IIIPASCFLKIMGKEAS IQI+SCKVVI+LGIIGAILGTYSSFSQL
Sbjct: 513 IIIPASCFLKIMGKEASKIQIISCKVVILLGIIGAILGTYSSFSQL 558

[Close]

BLAST of Sed0015143 vs. NCBI nr
Match: XP_022147748.1 (amino acid transporter AVT1A-like [Momordica charantia])

HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39
Identity = 97/109 (88.99%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLPAR+SNS  CSILIRTALVISS+CVALLLPFFGLVMALIGSLL ILIA
Sbjct: 416 MTPLAKSIEERLPARYSNSYCCSILIRTALVISSVCVALLLPFFGLVMALIGSLLCILIA 475

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           IIIPASCFLKIMGKEA+N QI+SCKVVIVLGIIGAILGTYSSFS++  Q
Sbjct: 476 IIIPASCFLKIMGKEATNTQIISCKVVIVLGIIGAILGTYSSFSEIAHQ 524

[Close]

BLAST of Sed0015143 vs. NCBI nr
Match: XP_022983750.1 (amino acid transporter AVT1A-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 171.8 bits (434), Expect = 3.3e-39
Identity = 91/106 (85.85%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLPAR SNS WCSILIRTALV+SSLCVALLLPFFGLV+ALIGSLL ILIA
Sbjct: 427 MTPLAKSIEERLPARVSNSLWCSILIRTALVLSSLCVALLLPFFGLVLALIGSLLCILIA 486

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQL 107
           I+IPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTYSSFSQ+
Sbjct: 487 IVIPASCFLKIMGKEASRLQVISCKVVILVGIVGAVLGTYSSFSQM 532

[Close]

BLAST of Sed0015143 vs. NCBI nr
Match: XP_022983749.1 (amino acid transporter AVT1A-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 171.8 bits (434), Expect = 3.3e-39
Identity = 91/106 (85.85%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLPAR SNS WCSILIRTALV+SSLCVALLLPFFGLV+ALIGSLL ILIA
Sbjct: 435 MTPLAKSIEERLPARVSNSLWCSILIRTALVLSSLCVALLLPFFGLVLALIGSLLCILIA 494

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQL 107
           I+IPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTYSSFSQ+
Sbjct: 495 IVIPASCFLKIMGKEASRLQVISCKVVILVGIVGAVLGTYSSFSQM 540

[Close]

BLAST of Sed0015143 vs. NCBI nr
Match: XP_008443261.1 (PREDICTED: amino acid transporter ANT1-like [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 4.3e-39
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLP R SNS WCS+LIRTALVISSLCVALLLPFFGLVMALIGSLL ILIA
Sbjct: 443 MTPLAKSIEERLPNRLSNSYWCSVLIRTALVISSLCVALLLPFFGLVMALIGSLLCILIA 502

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQL 107
           IIIPASCFLKIMG+EAS IQI+SCKVVIVLGII AILGTYSSFS+L
Sbjct: 503 IIIPASCFLKIMGREASKIQIISCKVVIVLGIIAAILGTYSSFSRL 548

[Close]

BLAST of Sed0015143 vs. ExPASy Swiss-Prot
Match: O80668 (Amino acid transporter AVT1A OS=Arabidopsis thaliana OX=3702 GN=AVT1A PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 3.9e-27
Identity = 62/107 (57.94%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           M PLA+SIEE LP R S + WC +L+RTALV SS+C A L+PFFGL+MALIGSLLSIL+A
Sbjct: 426 MNPLARSIEELLPERMSENIWCFLLLRTALVASSVCSAFLIPFFGLMMALIGSLLSILVA 485

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLI 108
           II+PA CF+KIMG +A+  Q++   +++ +G++   LGTYSS +++I
Sbjct: 486 IIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYSSVAKII 532

[Close]

BLAST of Sed0015143 vs. ExPASy Swiss-Prot
Match: F4IUW3 (Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.3e-19
Identity = 48/109 (44.04%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           ++P+A S+EE +P+R   S W +I IRT LV S+L V L +PFFGLVM+LIGSLL++L+ 
Sbjct: 439 ISPVAMSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFFGLVMSLIGSLLTMLVT 498

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           +I+P +CFL I+ ++ +  Q++ C ++I++G I +++G+YS+ S+++ +
Sbjct: 499 LILPPACFLSIVRRKVTPTQMMLCVLIIIVGAISSVIGSYSALSKIVEK 547

[Close]

BLAST of Sed0015143 vs. ExPASy Swiss-Prot
Match: F4JE35 (Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 7.4e-18
Identity = 46/109 (42.20%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           ++P+A S+EE +P+ +  S + +I IR+AL IS+L V L +PFFGLVM+LIGS L++LI 
Sbjct: 429 LSPVAMSLEELIPSNYGKSRFYAIAIRSALAISTLLVGLAIPFFGLVMSLIGSFLTMLIT 488

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           +I+P +CFL I+ K+ +  Q+  C +++ +G + +++GTYS+ +++I +
Sbjct: 489 LILPPACFLSILRKKVTPTQVTICILIMTVGAVCSVIGTYSALAKIIEK 537

[Close]

BLAST of Sed0015143 vs. ExPASy Swiss-Prot
Match: Q8GYS4 (Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-16
Identity = 51/109 (46.79%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           +TP+  S+EE +P     S   SIL RT LV S+L VAL +PFF +V ALIGS L++L+A
Sbjct: 439 ITPIVMSLEELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFFAIVAALIGSFLAMLVA 498

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           +I P  C+L I+  + SN QI  C  +IV G++    GTYS+ S+L +Q
Sbjct: 499 LIFPCLCYLSILKGKLSNTQIGLCIFIIVFGVVSGCCGTYSAISRLANQ 547

[Close]

BLAST of Sed0015143 vs. ExPASy Swiss-Prot
Match: Q8LPF4 (Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.7e-15
Identity = 48/111 (43.24%), Postives = 74/111 (66.67%), Query Frame = 0


Query: 1   MTPLAKSIEERLP--ARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSIL 60
           +TP+  S+EE +P  +R   S   S+L RT LV+S+L VAL +PFF  V ALIGS +++L
Sbjct: 414 ITPVMLSLEELIPSSSRKMRSKGVSMLFRTILVLSTLVVALTVPFFATVAALIGSFIAML 473

Query: 61  IAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           IA+I P  C++ IM    +N QI  C +++++GI+    GTYS+ ++LI +
Sbjct: 474 IALIFPCLCYISIMKGRLTNFQIGICILIVIIGIVSGCCGTYSAIARLIGE 524

[Close]

BLAST of Sed0015143 vs. ExPASy TrEMBL
Match: A0A6J1D256 (amino acid transporter AVT1A-like OS=Momordica charantia OX=3673 GN=LOC111016611 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.3e-40
Identity = 97/109 (88.99%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLPAR+SNS  CSILIRTALVISS+CVALLLPFFGLVMALIGSLL ILIA
Sbjct: 416 MTPLAKSIEERLPARYSNSYCCSILIRTALVISSVCVALLLPFFGLVMALIGSLLCILIA 475

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           IIIPASCFLKIMGKEA+N QI+SCKVVIVLGIIGAILGTYSSFS++  Q
Sbjct: 476 IIIPASCFLKIMGKEATNTQIISCKVVIVLGIIGAILGTYSSFSEIAHQ 524

[Close]

BLAST of Sed0015143 vs. ExPASy TrEMBL
Match: A0A6J1J8D0 (amino acid transporter AVT1A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482274 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 91/106 (85.85%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLPAR SNS WCSILIRTALV+SSLCVALLLPFFGLV+ALIGSLL ILIA
Sbjct: 435 MTPLAKSIEERLPARVSNSLWCSILIRTALVLSSLCVALLLPFFGLVLALIGSLLCILIA 494

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQL 107
           I+IPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTYSSFSQ+
Sbjct: 495 IVIPASCFLKIMGKEASRLQVISCKVVILVGIVGAVLGTYSSFSQM 540

[Close]

BLAST of Sed0015143 vs. ExPASy TrEMBL
Match: A0A6J1J6S8 (amino acid transporter AVT1A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482274 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 91/106 (85.85%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLPAR SNS WCSILIRTALV+SSLCVALLLPFFGLV+ALIGSLL ILIA
Sbjct: 427 MTPLAKSIEERLPARVSNSLWCSILIRTALVLSSLCVALLLPFFGLVLALIGSLLCILIA 486

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQL 107
           I+IPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTYSSFSQ+
Sbjct: 487 IVIPASCFLKIMGKEASRLQVISCKVVILVGIVGAVLGTYSSFSQM 532

[Close]

BLAST of Sed0015143 vs. ExPASy TrEMBL
Match: A0A1S3B748 (amino acid transporter ANT1-like OS=Cucumis melo OX=3656 GN=LOC103486886 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-39
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLP R SNS WCS+LIRTALVISSLCVALLLPFFGLVMALIGSLL ILIA
Sbjct: 443 MTPLAKSIEERLPNRLSNSYWCSVLIRTALVISSLCVALLLPFFGLVMALIGSLLCILIA 502

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQL 107
           IIIPASCFLKIMG+EAS IQI+SCKVVIVLGII AILGTYSSFS+L
Sbjct: 503 IIIPASCFLKIMGREASKIQIISCKVVIVLGIIAAILGTYSSFSRL 548

[Close]

BLAST of Sed0015143 vs. ExPASy TrEMBL
Match: A0A6J1F8E2 (amino acid transporter AVT1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441796 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.1e-38
Identity = 90/106 (84.91%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           MTPLAKSIEERLPAR SNS WCSILIRTALV+SSL VALLLPFFGLV+ LIGSLL ILIA
Sbjct: 439 MTPLAKSIEERLPARVSNSLWCSILIRTALVLSSLSVALLLPFFGLVLTLIGSLLCILIA 498

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQL 107
           IIIPASCFLKIMGKEAS +Q++SCKVVI++GI+GA+LGTYSSFSQ+
Sbjct: 499 IIIPASCFLKIMGKEASRLQVISCKVVILVGIVGAVLGTYSSFSQM 544

[Close]

BLAST of Sed0015143 vs. TAIR 10
Match: AT2G41190.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-28
Identity = 62/107 (57.94%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           M PLA+SIEE LP R S + WC +L+RTALV SS+C A L+PFFGL+MALIGSLLSIL+A
Sbjct: 426 MNPLARSIEELLPERMSENIWCFLLLRTALVASSVCSAFLIPFFGLMMALIGSLLSILVA 485

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLI 108
           II+PA CF+KIMG +A+  Q++   +++ +G++   LGTYSS +++I
Sbjct: 486 IIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYSSVAKII 532

[Close]

BLAST of Sed0015143 vs. TAIR 10
Match: AT2G39130.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-20
Identity = 48/109 (44.04%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           ++P+A S+EE +P+R   S W +I IRT LV S+L V L +PFFGLVM+LIGSLL++L+ 
Sbjct: 439 ISPVAMSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFFGLVMSLIGSLLTMLVT 498

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           +I+P +CFL I+ ++ +  Q++ C ++I++G I +++G+YS+ S+++ +
Sbjct: 499 LILPPACFLSIVRRKVTPTQMMLCVLIIIVGAISSVIGSYSALSKIVEK 547

[Close]

BLAST of Sed0015143 vs. TAIR 10
Match: AT5G02180.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-17
Identity = 51/109 (46.79%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 1   MTPLAKSIEERLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILIA 60
           +TP+  S+EE +P     S   SIL RT LV S+L VAL +PFF +V ALIGS L++L+A
Sbjct: 439 ITPIVMSLEELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFFAIVAALIGSFLAMLVA 498

Query: 61  IIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           +I P  C+L I+  + SN QI  C  +IV G++    GTYS+ S+L +Q
Sbjct: 499 LIFPCLCYLSILKGKLSNTQIGLCIFIIVFGVVSGCCGTYSAISRLANQ 547

[Close]

BLAST of Sed0015143 vs. TAIR 10
Match: AT5G02170.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 81.3 bits (199), Expect = 5.4e-16
Identity = 48/111 (43.24%), Postives = 74/111 (66.67%), Query Frame = 0


Query: 1   MTPLAKSIEERLP--ARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSIL 60
           +TP+  S+EE +P  +R   S   S+L RT LV+S+L VAL +PFF  V ALIGS +++L
Sbjct: 414 ITPVMLSLEELIPSSSRKMRSKGVSMLFRTILVLSTLVVALTVPFFATVAALIGSFIAML 473

Query: 61  IAIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
           IA+I P  C++ IM    +N QI  C +++++GI+    GTYS+ ++LI +
Sbjct: 474 IALIFPCLCYISIMKGRLTNFQIGICILIVIIGIVSGCCGTYSAIARLIGE 524

[Close]

BLAST of Sed0015143 vs. TAIR 10
Match: AT3G09330.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 71.2 bits (173), Expect = 5.6e-13
Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 1   MTPLAKSIEE-RLPARFSNSCWCSILIRTALVISSLCVALLLPFFGLVMALIGSLLSILI 60
           +TP+   +EE  LP+    S   SI I+T LV+S+L VAL  PFF ++ AL+GS L++L+
Sbjct: 413 LTPIVLGLEELMLPSEKMRSYGVSIFIKTILVLSTLVVALTFPFFAIMGALMGSFLAMLV 472

Query: 61  AIIIPASCFLKIMGKEASNIQILSCKVVIVLGIIGAILGTYSSFSQLISQ 110
             I P  C+L I+    S  QI  C  +I+ GI+    GTYS+  +L+ +
Sbjct: 473 DFIFPCLCYLSILKGRLSKTQIGICVFIIISGIVSGCCGTYSAIGRLVGK 522

The following BLAST results are available for this feature:

BLAST of Sed0015143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905343.1	4.6e-41	94.34	amino acid transporter AVT1A-like isoform X1 [Benincasa hispida]	[more]
XP_022147748.1	1.9e-39	88.99	amino acid transporter AVT1A-like [Momordica charantia]	[more]
XP_022983750.1	3.3e-39	85.85	amino acid transporter AVT1A-like isoform X2 [Cucurbita maxima]	[more]
XP_022983749.1	3.3e-39	85.85	amino acid transporter AVT1A-like isoform X1 [Cucurbita maxima]	[more]
XP_008443261.1	4.3e-39	90.57	PREDICTED: amino acid transporter ANT1-like [Cucumis melo]	[more]

BLAST of Sed0015143 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80668	3.9e-27	57.94	Amino acid transporter AVT1A OS=Arabidopsis thaliana OX=3702 GN=AVT1A PE=2 SV=2	[more]
F4IUW3	2.3e-19	44.04	Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1	[more]
F4JE35	7.4e-18	42.20	Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2	[more]
Q8GYS4	2.4e-16	46.79	Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1	[more]
Q8LPF4	7.7e-15	43.24	Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1	[more]

BLAST of Sed0015143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D256	9.3e-40	88.99	amino acid transporter AVT1A-like OS=Momordica charantia OX=3673 GN=LOC111016611...	[more]
A0A6J1J8D0	1.6e-39	85.85	amino acid transporter AVT1A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1J6S8	1.6e-39	85.85	amino acid transporter AVT1A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3B748	2.1e-39	90.57	amino acid transporter ANT1-like OS=Cucumis melo OX=3656 GN=LOC103486886 PE=3 SV...	[more]
A0A6J1F8E2	5.1e-38	84.91	amino acid transporter AVT1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0015143 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41190.1	2.8e-28	57.94	Transmembrane amino acid transporter family protein	[more]
AT2G39130.1	1.6e-20	44.04	Transmembrane amino acid transporter family protein	[more]
AT5G02180.1	1.7e-17	46.79	Transmembrane amino acid transporter family protein	[more]
AT5G02170.1	5.4e-16	43.24	Transmembrane amino acid transporter family protein	[more]
AT3G09330.1	5.6e-13	40.00	Transmembrane amino acid transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 17..103 e-value: 6.9E-13 score: 48.1
None	No IPR available	PANTHER	PTHR48017	OS05G0424000 PROTEIN-RELATED	coord: 1..108
None	No IPR available	PANTHER	PTHR48017:SF185	BNAA03G19350D PROTEIN	coord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015143.1	Sed0015143.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015293	symporter activity