Sed0015138 (gene) Chayote v1

Overview


Name	Sed0015138
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S acidic ribosomal protein P2-like
Location	LG10: 5398939 .. 5401637 (+)
RNA-Seq Expression	Sed0015138
Synteny	Sed0015138

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGTTCCTGGCTCAAACAATACATTCAAGGTGAGTTTACTTACAATTTTGATTTTGCACGTAACTCCTTTTTAAAACATCCTTTAAAACTTATCAAAATTTCTAGGTTTTGAGATCATTTGACAACTTAAATAATGTGAATAAATTCAACCCTATTCAACTCAATTTGATCGGTTAGATTGGGGTATCAACTTACTTATTTAGATTATGTTGATTTCAAATAAATAAAATTTTCTTGAAATAGATTGGTTCATGAAACTATAATTTGAATATTGATCCACGCTAATACAAATTTATAATTAAATTTTAAAAATATATGTTTTTTACTTATAACATAATTATATATGCCTATACTTATTTTATTTAATTAGATATTTTGGACCTTTTATCCACTAATATACTTTAAAATAATTTTTTAAGTCTTAAAAATATATGATATAAATTAAAGTCGAACATCTAATTGAAGTTATTAGGTTGCTTTCTATAAAAGTTTTTTTTTAAAAAGATTACATTTAAATTTTAAAAAAAAACTAACTGGATGACCCACCTTAATCTAACTCAAAAATATATGGATTGAACTAGATTGTTCAAGGGTCAATCAATTCATCAATCCAAAAGTTGATTAAATAAATTTTCTTAATATAATCTAAACCGATATACATCCTTAAAAATTTATTGTGTAAGCCAACCTTTCACCCAAATATCCTTTTATATTTTTTTAATCATATCATATCATACTTAAAATGTGGCTTAAAGAAACAATCATTTTTAGATGATTTTATCCTTAAGCCAGATTCTAAATTACAAACATGTCATCTATAATTATTGAAAAATATTAATCTACACTCACATATGGCCCACCTTTTTTTTGTTGAGAATTTTGGCCACCCTATTTAAATTATGACTAACTAAATAATAATAATTATACGGCATCTCCTATTGAAATATATATATAAAAAAATTAAATGCAAATAAGGGAGAAGATATTTATAATATCATTTAGATTTTCACCATTTTTATAATGTAGGAGATAAAATATTTTTACAAATCTCATAAATTTTATATGTAAGTCAGAAGATAATAGATTCGATAAACTCTAAAATATAATACTTATTGTATTTAATTTTCTCGTATTTAAATTTATTATTGTGATTAATTATAAATATTATTTCTTATTTAATCTATGTGATAAAATGCCAAAATGGTAATAAAATAGGGTTTGAATTTAGGAAAATAAATTTAAATAGAAAAAAATTGAAAAAATATATATTTATTAAATAATTAATGAAAGTGGCGTTGCTACTGCTTTGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAATTCAATTGGACTCAAATAAGCCCAAACCTATTTTAATATATATGTATATATGTAGATGTATATATATGTATATATGTAGATGTATATATATGTATATGTTTATATGTATGTATATGTATATGTTTATATGTATGTATATGTATATGTTTATATGTATGTATATGTATATGTTTATATGTATGTATATGTTTATATGTATATATATGTTTATATGTATATATGTATGTATATATATGTATAAATGTATGTATATATGTATATGTATATGTATATATATGTATATATATGTATATGTATGTATATGTATGTATATGTATGTATGTATATCTGTATATGTATGCATGCAGAGACTGTAGACATTCAGTCGCAGATATAAAGGAAAAAAAGGAGGAAGCAGCAAGAGAAAAAGTCGTCCACATTAGTTTGAGTTTCTTTTATTCTTTTGATTTTGTTTGATTTCTCCTTGGGTTTTATTTTTAATTCAAAGTTTTAATTTAATTGTAGTTTTGTGAAGCTTTGGACCTAATTGTTTTTTAATTCAAAGATTATTTGTTTCTTGTTTTAGTTCTTCGTTAACAAATTAAATTGACGTCTTAGTTTGTTATTAATTGATCTATGCTATACATTTTTGTGATAAGTTATTGTTTCGAAAGATTGTAAATTGTAGTTGTCTTATGTGTGTGTGATTGTGACTTTTCTAAATTACTGATATCTCTAGAGAAACAAATAAACAAAGCCTATCGCACCGATTAGTTAAATAGTAAACTTTGAGTTTGACTCTAAGTCAGAATTAATAATATAGGAGAACAATTATCTAACCTTGAACTGAAAGTTTTAGTTAAATTGTTTATTTTATTCGTTTTATTGTTTAGTTAGAATTTTATTCAAACACCAAAATCTCCTATTTTATTTGTTTTTAATATTGAAAAATTAATTAAGATATTTTTACTAAATCTCATTCATTTTATGCTTCTTAGAACATAAGAGATTCCCACTCATACTATGAATAATCAAAGCTTTTTCAAACAAAATCCAAAAATTGCTTATATTTGGTTGTCAGATTAAGGCCATTCTAGGCTCTGGTATTTCTATTAAATTTAGTGAAATGTTATTTGAATTAGTTTCTTATTTCTTAATTTGTTGATATAATTTATAATGCATTTGTTCAACAGTTGGAATTGAGGTTGAGGATGAAAGACTTGAGCTTCTTCTTTCCCAAGTTAAGGGCAAGGATTTAGCAGAACTTGTTGCCTGTGGGAGCCAGAAGATGGCTTCCATCCCTTCTGCCGCCGGGGCTGCCATGTCGGCCATTGCACGACCCGCCACCCATATTCCCAATATGTTTTCTTAA

mRNA sequence

ATGAAAAGTTCCTGGCTCAAACAATACATTCAAGTTGGAATTGAGGTTGAGGATGAAAGACTTGAGCTTCTTCTTTCCCAAGTTAAGGGCAAGGATTTAGCAGAACTTGTTGCCTGTGGGAGCCAGAAGATGGCTTCCATCCCTTCTGCCGCCGGGGCTGCCATGTCGGCCATTGCACGACCCGCCACCCATATTCCCAATATGTTTTCTTAA

Coding sequence (CDS)

ATGAAAAGTTCCTGGCTCAAACAATACATTCAAGTTGGAATTGAGGTTGAGGATGAAAGACTTGAGCTTCTTCTTTCCCAAGTTAAGGGCAAGGATTTAGCAGAACTTGTTGCCTGTGGGAGCCAGAAGATGGCTTCCATCCCTTCTGCCGCCGGGGCTGCCATGTCGGCCATTGCACGACCCGCCACCCATATTCCCAATATGTTTTCTTAA

Protein sequence

MKSSWLKQYIQVGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIARPATHIPNMFS

Homology

[Close]

BLAST of Sed0015138 vs. NCBI nr
Match: CAA2957147.1 (60S acidic ribosomal P2B-like [Olea europaea subsp. europaea])

HSP 1 Score: 64.7 bits (156), Expect = 3.6e-07
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1  MKSSWLKQYIQVGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIAR 60
          M  +W + +  VG E +DER+ELLLSQVKGKD+ EL+A G +K+AS+PS  GA   A+A 
Sbjct: 1  MVINWFEFFGSVGAEADDERIELLLSQVKGKDITELIAAGREKLASVPSGGGAV--AVAA 60

Query: 61 PA 63
          PA
Sbjct: 61 PA 60

[Close]

BLAST of Sed0015138 vs. NCBI nr
Match: XP_022143771.1 (60S acidic ribosomal protein P2A-like [Momordica charantia] >XP_022143773.1 60S acidic ribosomal protein P2A-like [Momordica charantia] >XP_022143774.1 60S acidic ribosomal protein P2A-like [Momordica charantia])

HSP 1 Score: 63.5 bits (153), Expect = 8.1e-07
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIARPA 63
          VG+EVED+R+ELLLSQVKG DLAE+VACG +KMASIP  AGAA++  A  A
Sbjct: 30 VGVEVEDDRIELLLSQVKGTDLAEIVACGREKMASIP-CAGAAIAVGAPTA 79

[Close]

BLAST of Sed0015138 vs. NCBI nr
Match: XP_039034173.1 (60S acidic ribosomal protein P2-2-like [Hibiscus syriacus])

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-06
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSA 58
          VG E ED+R+ELLLS+VKGKD+ EL+ACG +K+AS+PS  GA  +A
Sbjct: 30 VGAEAEDDRIELLLSEVKGKDITELIACGREKLASVPSGGGAVAAA 75

[Close]

BLAST of Sed0015138 vs. NCBI nr
Match: XP_004143310.2 (60S acidic ribosomal protein P2 [Cucumis sativus] >KGN48246.1 hypothetical protein Csa_003607 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06
Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGA 54
          VG+E EDER+ELLLSQVKGKD+AELVACG +KMA +P    A
Sbjct: 30 VGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSA 71

[Close]

BLAST of Sed0015138 vs. NCBI nr
Match: XP_007027672.1 (PREDICTED: 60S acidic ribosomal protein P2-4 [Theobroma cacao] >XP_021289410.1 60S acidic ribosomal protein P2-4-like [Herrania umbratica] >EOY08174.1 60S acidic ribosomal protein P2-4 [Theobroma cacao])

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06
Identity = 30/48 (62.50%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIA 60
          VG EVED+R++LLLS+VKGKD+ EL+A G +K+AS+PS  G A+SA A
Sbjct: 30 VGAEVEDDRIQLLLSEVKGKDITELIAAGREKLASVPSGGGVAVSAAA 77

[Close]

BLAST of Sed0015138 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-07
Identity = 26/48 (54.17%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIA 60
          VG + +D+++ELLLSQVKGKD+ EL+A G +++AS+PS  G A++A A
Sbjct: 30 VGADADDDKIELLLSQVKGKDITELIASGRERLASVPSGGGVAVAAAA 77

[Close]

BLAST of Sed0015138 vs. ExPASy Swiss-Prot
Match: P51407 (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-07
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMS 57
          VG E ED ++ELLL +VKGKDLAEL+A G +K+AS+PS  G  ++
Sbjct: 30 VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVA 74

[Close]

BLAST of Sed0015138 vs. ExPASy Swiss-Prot
Match: Q9SLF7 (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.9e-07
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMS 57
          VG E ED ++ELLL +VKGKDLAEL+A G +K+AS+PS  G  ++
Sbjct: 30 VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVA 74

[Close]

BLAST of Sed0015138 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 54.3 bits (129), Expect = 6.4e-07
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIARPA 63
          VG EV++E++ELLLSQ+ GKD+ EL+A G +K AS+P   G    A A PA
Sbjct: 30 VGCEVDNEKMELLLSQLSGKDITELIAAGREKFASVPCGGGGVAVAAAAPA 80

[Close]

BLAST of Sed0015138 vs. ExPASy Swiss-Prot
Match: Q9LXM8 (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.4e-07
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSA 58
          VG +V+ E +ELLL +V GKD+AEL+A G +K+AS+PS  G A+SA
Sbjct: 30 VGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGGVAVSA 75

[Close]

BLAST of Sed0015138 vs. ExPASy TrEMBL
Match: A0A6J1CQB9 (60S acidic ribosomal protein P2A-like OS=Momordica charantia OX=3673 GN=LOC111013606 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.9e-07
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIARPA 63
          VG+EVED+R+ELLLSQVKG DLAE+VACG +KMASIP  AGAA++  A  A
Sbjct: 30 VGVEVEDDRIELLLSQVKGTDLAEIVACGREKMASIP-CAGAAIAVGAPTA 79

[Close]

BLAST of Sed0015138 vs. ExPASy TrEMBL
Match: A0A2G5D6V2 (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02700433v1 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIA 60
          VG EVEDER+ELLLSQVKGKD+ EL+A G +K+AS+PS  G A  A++
Sbjct: 30 VGAEVEDERIELLLSQVKGKDITELIASGREKLASVPSGGGGAPVAVS 77

[Close]

BLAST of Sed0015138 vs. ExPASy TrEMBL
Match: A0A6J1ARA8 (60S acidic ribosomal protein P2-4-like OS=Herrania umbratica OX=108875 GN=LOC110420426 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06
Identity = 30/48 (62.50%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIA 60
          VG EVED+R++LLLS+VKGKD+ EL+A G +K+AS+PS  G A+SA A
Sbjct: 30 VGAEVEDDRIQLLLSEVKGKDITELIAAGREKLASVPSGGGVAVSAAA 77

[Close]

BLAST of Sed0015138 vs. ExPASy TrEMBL
Match: A0A061F117 (60S acidic ribosomal protein P2-4 OS=Theobroma cacao OX=3641 GN=TCM_022507 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06
Identity = 30/48 (62.50%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIA 60
          VG EVED+R++LLLS+VKGKD+ EL+A G +K+AS+PS  G A+SA A
Sbjct: 30 VGAEVEDDRIQLLLSEVKGKDITELIAAGREKLASVPSGGGVAVSAAA 77

[Close]

BLAST of Sed0015138 vs. ExPASy TrEMBL
Match: A0A2G5D6W1 (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02700433v1 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMSAIA 60
          VG EVEDER+ELLLSQVKGKD+ EL+A G +K+AS+PS  G A  A++
Sbjct: 30 VGAEVEDERIELLLSQVKGKDITELIASGREKLASVPSGGGGAPVAVS 77

[Close]

BLAST of Sed0015138 vs. TAIR 10
Match: AT2G27710.4 (60S acidic ribosomal protein family )

HSP 1 Score: 56.6 bits (135), Expect = 9.2e-09
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAA 55
          VG E ED ++ELLL +VKGKDLAEL+A G +K+AS+PS  GA+
Sbjct: 30 VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGAS 72

[Close]

BLAST of Sed0015138 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family )

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-08
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMS 57
          VG E ED ++ELLL +VKGKDLAEL+A G +K+AS+PS  G  ++
Sbjct: 30 VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVA 74

[Close]

BLAST of Sed0015138 vs. TAIR 10
Match: AT2G27720.1 (60S acidic ribosomal protein family )

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-08
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMS 57
          VG E ED ++ELLL +VKGKDLAEL+A G +K+AS+PS  G  ++
Sbjct: 30 VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVA 74

[Close]

BLAST of Sed0015138 vs. TAIR 10
Match: AT2G27710.2 (60S acidic ribosomal protein family )

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-08
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMS 57
          VG E ED ++ELLL +VKGKDLAEL+A G +K+AS+PS  G  ++
Sbjct: 30 VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVA 74

[Close]

BLAST of Sed0015138 vs. TAIR 10
Match: AT2G27710.3 (60S acidic ribosomal protein family )

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-08
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 12 VGIEVEDERLELLLSQVKGKDLAELVACGSQKMASIPSAAGAAMS 57
          VG E ED ++ELLL +VKGKDLAEL+A G +K+AS+PS  G  ++
Sbjct: 30 VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVA 74

The following BLAST results are available for this feature:

BLAST of Sed0015138 vs. NCBI nr


Match Name	E-value	Identity	Description
CAA2957147.1	3.6e-07	54.84	60S acidic ribosomal P2B-like [Olea europaea subsp. europaea]	[more]
XP_022143771.1	8.1e-07	70.59	60S acidic ribosomal protein P2A-like [Momordica charantia] >XP_022143773.1 60S ...	[more]
XP_039034173.1	1.8e-06	63.04	60S acidic ribosomal protein P2-2-like [Hibiscus syriacus]	[more]
XP_004143310.2	2.4e-06	71.43	60S acidic ribosomal protein P2 [Cucumis sativus] >KGN48246.1 hypothetical prote...	[more]
XP_007027672.1	2.4e-06	62.50	PREDICTED: 60S acidic ribosomal protein P2-4 [Theobroma cacao] >XP_021289410.1 6...	[more]

BLAST of Sed0015138 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41099	1.3e-07	54.17	60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1	[more]
P51407	2.9e-07	57.78	60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 ...	[more]
Q9SLF7	2.9e-07	57.78	60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 ...	[more]
P46252	6.4e-07	52.94	60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3	[more]
Q9LXM8	8.4e-07	56.52	60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana OX=3702 GN=RPP2D PE=3 ...	[more]

BLAST of Sed0015138 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQB9	3.9e-07	70.59	60S acidic ribosomal protein P2A-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A2G5D6V2	1.1e-06	64.58	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02700433v1 PE=3...	[more]
A0A6J1ARA8	1.1e-06	62.50	60S acidic ribosomal protein P2-4-like OS=Herrania umbratica OX=108875 GN=LOC110...	[more]
A0A061F117	1.1e-06	62.50	60S acidic ribosomal protein P2-4 OS=Theobroma cacao OX=3641 GN=TCM_022507 PE=3 ...	[more]
A0A2G5D6W1	1.1e-06	64.58	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02700433v1 PE=3...	[more]

BLAST of Sed0015138 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27710.4	9.2e-09	62.79	60S acidic ribosomal protein family	[more]
AT2G27710.1	2.1e-08	57.78	60S acidic ribosomal protein family	[more]
AT2G27720.1	2.1e-08	57.78	60S acidic ribosomal protein family	[more]
AT2G27710.2	2.1e-08	57.78	60S acidic ribosomal protein family	[more]
AT2G27710.3	2.1e-08	57.78	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 11..57 e-value: 1.6E-7 score: 31.8
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 9..41 e-value: 2.6E-7 score: 32.7
IPR044076	Ribosomal protein P2	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 10..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015138.1	Sed0015138.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002182	cytoplasmic translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome