Sed0015134 (gene) Chayote v1

Overview


Name	Sed0015134
Type	gene
Organism	Sechium edule (Chayote v1)
Description	28S ribosomal protein S29, mitochondrial
Location	LG01: 9017251 .. 9021783 (+)
RNA-Seq Expression	Sed0015134
Synteny	Sed0015134

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCAAATAGGCTTACACTTCACAGTTGTGCAAAACCCAAAACCTGGTGTTCATCTTCGTCCCCATTTCCGACGGCCGGAAAATGTTTCGATCGATTCTCCGATCAACAGCCGCCGCCTCAAAACATCATCTCTTCAATCGAAATCCAAACCCTAATCCCTCTCCGATCCTATCACTTTCTTCGAATTACTCAGCTAAGACCGCCAAACCCAATGTCAAGAAGGGCAAGAAAGGGAAGTCCAATGCCGACGCCAAAGCCGCCGACGATTCCTCCGCCTCCGCCGCCGCTTCCGACGAGTTAGATGCGGCGCTTTCCGATGATAAATCCCGCGCCCGCCGTCTCGCCGCCGAGGAAAATGATCCCTCACTCGATGTCGGCCCTAATGGCCGCCCTCTCTTTACATCCACTTCTTCAATCTCGCAGCTCACTCACAAGGATGCAGGCACTTATTTCAAATTCAAGTACGTATGTTTTGTACATTGTTTATGAATGAATGTTTGTTTGGATATTTATTCGTTGCTTTACGAAATGGAAGTATGGAAGAGCTAAACGAGGCTCTGCCGGAGGGTTTGCCTTCGGGGATGGTGAAGGAGTTCGAGGAGGCTATGCGAAGTGCTGTGCTTGTGCGGCGAAGTTTCTTAGATCTTCGCGATAATTTCAGGCGTGTGGTTGATCCTTCATTGCCATCTCCGGCTGGTAGGGGGAAATGGTTTGTTGTTATTTATATATACTGATTCTTTGGTTGAACGAATTTGATCAATATTTTTGGTGCTGCTATTTCTATTCAAATGTTCAGGTTCAAAAGTTAGAAAGCAGATTGTATTGGATGGTCCGGTCAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCACTGGGCTCGTGATGAAGGTTGGCTAGTTCTATATGTTCCGAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACAATCAAACAGGACTTTGGGATACACCGGTTCAGGCCGAAGATGTATTGAGAGTGAGGAATTTTTCTTGATACTTAAGAGTTAGATCGAAGTATTGGCGTGTATTTGTTATGAATATGCCAGATTTTAGTAGTTTCTTTCCTCAGCCTTTGAAGTCGTTTTGGATTGCTATCTCATGTTCTATATTTCATTGTTGTCACCCTCGTCAGATGTAGTTTAATGGGTTTTTTTTTATTCTATTAACAAATGTTAATTCTTTTTACACCATGCTGAAGATTTTGACAAGGGAAATAATTTCTCACGATCATGATTCTGTTTGGTAGCTGACTGGGAAATGTTTCATGCACACAGTGTTTACTGTTTCTGATAAGCTTTCTGGAGATCAAGTGAGGATTATGGAAAGTTGAAACAGTTGACTTATTTAGTTTTATTGGTTTTGACCAGGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAAATATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTTGGGATGATGAAAGGTGCTGATTCCATGACAATGCCTGAGGGTTCGACTTTATATGACTTGATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTCGTAGTTCGTTTAAGAAAAGAACTATCACTTGTGAAAGATGTTCCTGTGCTTATTGCTATTGATCAAGTGAGACCCAAAACTACATCTACCCTTTCTTTGATTTTTAACATTAAGTTTCTTTGATGAATTAGATATTCCAGAATTAATTTTGATATCAGCAAAAACTGTCTGACTTATTCGTGGCTGTTATTTCTTGTCCAGTATAATAACTGGTTTACATTCAGTGAGTATGAAGAAGCTGTGACTGTTCGTTCTACTCGACCAATACATGCTAAGGAACTCGCAATGGTTAGTACTATCGACATTTTTGGAATGATTTTTTTGTGTTCTACTCACTTCCATTATTGCAATTCAATGGGTGTTCCTGGAACATCTTGTTCGGTTTATGTGCATGTTTCTTTATTACTTGGCTCAACGTCTGCTTACTTACTCCAAATTTACCTCGTCTATTTATTATTTAAGCATCACAATGGAACTGGTCCACCTCCTATCCTGAAGCAGGCAGAGTATACATCAAATGTGATTTTTTTTATTAAATGAAAAACCAACATATTTTCATGGAAATCTTAGTTGGACTTTTTATTTATTTATATATATATCTGTGATTGTCCATGCCAACTTGCGCGCACCTCGACTAATGTCATAGGACATACCATTTAACTCTACAACATTTGGATGTCAAGAAAAATCTAGAAAATTAATTCCTAAGTAGGTGACTACCATGGATTGAACTCATTTCCTTAAGCACTCCAAGATCTTCTTTGACCACTTGAGCGGTTCCATGATGGTTTTTCAGCTTATACTTCTTGCCCTTTGAACTTTATAAATCCTTAGAAAGTTCTTAAACTTCATGTGAGAATAGTTGGTATGTGCATAAGGTGGTCTGAACACTCACATATATAAAAAATACAAAATAAGTTCTTAAAATTTAATAGATCACTAATGAGTTTTAAATTTGTAATGTTCTGTCTAATACAGACAAATATTGTGTCTATATCCCTGAAATTAAAAATTCTTTGAACTTTTATGTCTAAAATGTCAATGAAATTTTGAACTTTTAATTTTGTGTATAAATAAGTCTACGAATAAGGTTCAAGAACTAAGTAGACTCAAAATTAATAGTTCAGAGACCTATTAAGGGCACCTATTAGACAACATTGAAACTTGAGGGGATCTATTGGACACAACTTTGAATGTTTTTTACTGATTTTACCTTGTATTTTTATTTCGAAATGATTCTTTAATTCTCACCTATCTTGTTCGTGGTTGTTTTTTCTTTTACTTTTCATGAATCAATGATACGAATTACAATTCTTTTCACAGGTAAAAGCTTTTAGATCTATGATGCACGACGACATGATGGTTGGTGCTTTCACTCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTGTAGGTGCACGCGTTAATTTCCCTCGCTATAGTCTTGATGAAGCAGCTTCTGTTTTCCACTATTACCTCAGGTATGCTTACTTGTATTTTGAAAAAGAAACTGATTTCATTTTAAAAATTAAGAATGTTGCATAAACAGAGAAAAGAAAATCCTTAAAAAGCTTTGATTGGTCAAGGATGTAGAACAAGCCCCCAATTGCCACTAGAGCTTTTCTCATCAGATAATAGAGGTCACAGTAAGCTGCCAGAAAGAGTTAACTCATAACTGTTAGATGGTATTGCCAATTGGTTTTTTGGCCAATAGAGTAGGTAGGTACGTACTTTCTAGTTGCAGGGTCACTGCTAACTAACTGTAAAGGTCATATGACTCTGACCGTCACTTCAACATAGCTGGAATCTAGTCTCCAAGAGATGGTGCAGCGGTTGAAGACTTGAGTTTTGAAGGTATGTTCCTCTCACGGTCTTAGGTTCGAGACTCACTTGACATTAATTTGTAGACACCTTTCGTGTCTCCATTCCTTCGATGTCTCCCGGTGCTTGGCTAAGGGTCATGCGTGGTTACCTTTGTTTCAAAGAAACATAGCTGGCATCTGGTTAATGTTGTGAGGCCTTTCCATGAACAACGTTCAGTACATTTGATGGGATTACTCTTTTTTTTTGTATCTTTATTTTTTTTTATAGGGCTCTTTGAGACCTGCACCAATTTTCTGGGAGGCCTTGACGCATAAACGGCGCTAACAAGATGAACATGACTTTAAGTTCTGTAACATGAATGTCACTTGTCATGATGTAGTCTGCAATCTGATGTTGCAAGAGCATTATACCTGCTTGGTCATTTATACAATTGTTGCTGTGCCTGTTGAGAGAGATGGTCACCTAAGTTTGTGATTCTATTATAGTTACTAACTAAATGTTAGGTTGATTTTTTTGAGAAATTTTTTTGGTTTTGAGCTTTGAACCATTTTCTTGTTCTAAGTTTGTGTAGAATGTTTTGCTTAGTTATTGATAATTTTGATGACAGACAAAGATTGATACGCCGTGAAGCGTTCTCAGAGAATGCGTGGAAGAAGATATACTATTTGGCAAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTTATGCGGTGACAGTGACTCCTCCTTTAATTTCACCCATCAATGAAATTGTTTCTTATTAAAAAAAATAGACGCGGTGACAGTGGCACCAATTGGCCAAATTTGTTCCTCGCCTGCTATCAGGTTCAATTCATTACATCGACTTCGGATACGGTTTGTGGTCATGCAACTGGATTTCTCTGACCCTCAAACATGGTTGATATGCTGGCCTAAAGTACCGAGTCCAGTGTTTGTATTTGTAAGTTTAGCGCCCACATTGGAGAATTAACCTTTTTTAAGACAGTTTTATTAGTCTGCTTGGCTACACTCACTCACTACCTTTTGTTTTTTGTTCTTAATAAGTTATACATGCTTTGACAGGTGTCATATTTAAAGGAAAATCTTATTTTGGTCCTCAA

mRNA sequence

TAGCAAATAGGCTTACACTTCACAGTTGTGCAAAACCCAAAACCTGGTGTTCATCTTCGTCCCCATTTCCGACGGCCGGAAAATGTTTCGATCGATTCTCCGATCAACAGCCGCCGCCTCAAAACATCATCTCTTCAATCGAAATCCAAACCCTAATCCCTCTCCGATCCTATCACTTTCTTCGAATTACTCAGCTAAGACCGCCAAACCCAATGTCAAGAAGGGCAAGAAAGGGAAGTCCAATGCCGACGCCAAAGCCGCCGACGATTCCTCCGCCTCCGCCGCCGCTTCCGACGAGTTAGATGCGGCGCTTTCCGATGATAAATCCCGCGCCCGCCGTCTCGCCGCCGAGGAAAATGATCCCTCACTCGATGTCGGCCCTAATGGCCGCCCTCTCTTTACATCCACTTCTTCAATCTCGCAGCTCACTCACAAGGATGCAGGCACTTATTTCAAATTCAATATGGAAGAGCTAAACGAGGCTCTGCCGGAGGGTTTGCCTTCGGGGATGGTGAAGGAGTTCGAGGAGGCTATGCGAAGTGCTGTGCTTGTGCGGCGAAGTTTCTTAGATCTTCGCGATAATTTCAGGCGTGTGGTTGATCCTTCATTGCCATCTCCGGCTGGTTCAAAAGTTAGAAAGCAGATTGTATTGGATGGTCCGGTCAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCACTGGGCTCGTGATGAAGGTTGGCTAGTTCTATATGTTCCGAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACAATCAAACAGGACTTTGGGATACACCGGTTCAGGCCGAAGATGTATTGAGAGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAAATATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTTGGGATGATGAAAGGTGCTGATTCCATGACAATGCCTGAGGGTTCGACTTTATATGACTTGATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTCGTAGTTCGTTTAAGAAAAGAACTATCACTTGTGAAAGATGTTCCTGTGCTTATTGCTATTGATCAATATAATAACTGGTTTACATTCAGTGAGTATGAAGAAGCTGTGACTGTTCGTTCTACTCGACCAATACATGCTAAGGAACTCGCAATGGTAAAAGCTTTTAGATCTATGATGCACGACGACATGATGGTTGGTGCTTTCACTCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTGTAGGTGCACGCGTTAATTTCCCTCGCTATAGTCTTGATGAAGCAGCTTCTGTTTTCCACTATTACCTCAGACAAAGATTGATACGCCGTGAAGCGTTCTCAGAGAATGCGTGGAAGAAGATATACTATTTGGCAAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTTATGCGGTGACAGTGACTCCTCCTTTAATTTCACCCATCAATGAAATTGTTTCTTATTAAAAAAAATAGACGCGGTGACAGTGGCACCAATTGGCCAAATTTGTTCCTCGCCTGCTATCAGGTTCAATTCATTACATCGACTTCGGATACGGTTTGTGGTCATGCAACTGGATTTCTCTGACCCTCAAACATGGTTGATATGCTGGCCTAAAGTACCGAGTCCAGTGTTTGTATTTGTAAGTTTAGCGCCCACATTGGAGAATTAACCTTTTTTAAGACAGTTTTATTAGTCTGCTTGGCTACACTCACTCACTACCTTTTGTTTTTTGTTCTTAATAAGTTATACATGCTTTGACAGGTGTCATATTTAAAGGAAAATCTTATTTTGGTCCTCAA

Coding sequence (CDS)

ATGTTTCGATCGATTCTCCGATCAACAGCCGCCGCCTCAAAACATCATCTCTTCAATCGAAATCCAAACCCTAATCCCTCTCCGATCCTATCACTTTCTTCGAATTACTCAGCTAAGACCGCCAAACCCAATGTCAAGAAGGGCAAGAAAGGGAAGTCCAATGCCGACGCCAAAGCCGCCGACGATTCCTCCGCCTCCGCCGCCGCTTCCGACGAGTTAGATGCGGCGCTTTCCGATGATAAATCCCGCGCCCGCCGTCTCGCCGCCGAGGAAAATGATCCCTCACTCGATGTCGGCCCTAATGGCCGCCCTCTCTTTACATCCACTTCTTCAATCTCGCAGCTCACTCACAAGGATGCAGGCACTTATTTCAAATTCAATATGGAAGAGCTAAACGAGGCTCTGCCGGAGGGTTTGCCTTCGGGGATGGTGAAGGAGTTCGAGGAGGCTATGCGAAGTGCTGTGCTTGTGCGGCGAAGTTTCTTAGATCTTCGCGATAATTTCAGGCGTGTGGTTGATCCTTCATTGCCATCTCCGGCTGGTTCAAAAGTTAGAAAGCAGATTGTATTGGATGGTCCGGTCAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCACTGGGCTCGTGATGAAGGTTGGCTAGTTCTATATGTTCCGAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACAATCAAACAGGACTTTGGGATACACCGGTTCAGGCCGAAGATGTATTGAGAGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAAATATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTTGGGATGATGAAAGGTGCTGATTCCATGACAATGCCTGAGGGTTCGACTTTATATGACTTGATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTCGTAGTTCGTTTAAGAAAAGAACTATCACTTGTGAAAGATGTTCCTGTGCTTATTGCTATTGATCAATATAATAACTGGTTTACATTCAGTGAGTATGAAGAAGCTGTGACTGTTCGTTCTACTCGACCAATACATGCTAAGGAACTCGCAATGGTAAAAGCTTTTAGATCTATGATGCACGACGACATGATGGTTGGTGCTTTCACTCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTGTAGGTGCACGCGTTAATTTCCCTCGCTATAGTCTTGATGAAGCAGCTTCTGTTTTCCACTATTACCTCAGACAAAGATTGATACGCCGTGAAGCGTTCTCAGAGAATGCGTGGAAGAAGATATACTATTTGGCAAATGGAAATGGAGCAGAAATGCGGTGGTTGGTACCATTTATGCGGTGA

Protein sequence

MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAADDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDAGTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPAGSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLWDTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHAKELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR

Homology

[Close]

BLAST of Sed0015134 vs. NCBI nr
Match: XP_022154896.1 (28S ribosomal protein S29, mitochondrial [Momordica charantia])

HSP 1 Score: 822.0 bits (2122), Expect = 2.5e-234
Identity = 413/459 (89.98%), Postives = 433/459 (94.34%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RS+LR+ AAASKHHL NR    NPSPILSLSSNYSAKT K  VKK KKGKSNADAKAA
Sbjct: 1   MLRSVLRAAAAASKHHLCNR----NPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAA 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SA+AAASD+LDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTS SS+SQLT KD+
Sbjct: 61  DDPSATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDS 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFKFNME LNE LPEGLP GMVKEFEE+MRSAVLVR+SFL+LRDNFRRVVDPSL SP 
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPD 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           G K+RKQIVLDGPVNCGKS ALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKN QTGLW
Sbjct: 181 GLKIRKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTP+QAEDVLRDFLKYNETRLRQLPCQIS+PIPLGEGVGVGMMKGADSMTMPEGSTLYDL
Sbjct: 241 DTPIQAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTHAAVGVV+RLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTR IHA
Sbjct: 301 IDTGIKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+ ARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAF+E+AWKKIYYL+NGNGAEMRWLVP MR
Sbjct: 421 YLRQRLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of Sed0015134 vs. NCBI nr
Match: XP_008457304.1 (PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1 28S ribosomal protein S29 [Cucumis melo var. makuwa] >TYJ97246.1 28S ribosomal protein S29 [Cucumis melo var. makuwa])

HSP 1 Score: 814.3 bits (2102), Expect = 5.3e-232
Identity = 412/459 (89.76%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RSILR+TAAASKHH  NR    NPSPILS +SNYSAKT KP VKKGKKGKS ADAKA 
Sbjct: 1   MLRSILRATAAASKHHFCNR----NPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAG 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SAS AASD LDAALSDDK+RARRLAAEEND SLDVGPNGRPLFTS SS+SQLT KDA
Sbjct: 61  DDPSAS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFKFNME LNE LPEGLP GMVKEFEE++RSAVLVR+SFLDLRDNFRRVVDPSL SPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           GSK+RKQIVLDGPVNCGKSIALAMLVHWAR+EGWLVLYVPSGRRWTHGGFFFKN QTGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNE RLRQLPCQIS+PIPLGEGVGVGM KGADSM MP+GSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+GARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAFSE  WKKIYYL+NGNGAEMRWL P MR
Sbjct: 421 YLRQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of Sed0015134 vs. NCBI nr
Match: XP_011657272.1 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypothetical protein Csa_023053 [Cucumis sativus])

HSP 1 Score: 812.4 bits (2097), Expect = 2.0e-231
Identity = 408/459 (88.89%), Postives = 430/459 (93.68%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RSILR+T+AASKHH+ NR    NP+PILSL+SNYSAKT KP VKKGKKGKS ADAKA 
Sbjct: 1   MLRSILRATSAASKHHICNR----NPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAG 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SASAAASD+LDAALSDDK RARRLAAEEND SLDVGPNGRPLFTS SS+SQLT KDA
Sbjct: 61  DDPSASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFK+NME LNE LPEGLP GMVKEFEE++RSAVLVR+SFLDLRDNFRRVVDPSL SPA
Sbjct: 121 GTYFKYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           GSK+RKQIVLDGPVNCGKSIALAMLV WAR+EGWLVLYVPSGRRWTHGGFFFKN+QTGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNE +LRQLPCQI +PIPLGEG GVGM KGADSM MPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTH AVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTRPIHA
Sbjct: 301 IDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+GARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAFSE+AWKKIYYL+NGNGAEMRWL P MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of Sed0015134 vs. NCBI nr
Match: XP_004145300.3 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothetical protein Csa_023268 [Cucumis sativus])

HSP 1 Score: 807.0 bits (2083), Expect = 8.5e-230
Identity = 407/459 (88.67%), Postives = 426/459 (92.81%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RSILR+TAAASKHH  NR    NPSPILSL+SNYSAKT K  VKKGKKGKS ADAKA 
Sbjct: 1   MMRSILRATAAASKHHFSNR----NPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAG 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SA AAAS++LDAALSDDK RARRLAAEEND SLDVGPNGRPLFTS SS+SQLT KDA
Sbjct: 61  DDPSAPAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFK NME LNE LPEGLP GMVKEFEE++RSAVLVR+SFLDLRDNFRRVVDPSL SPA
Sbjct: 121 GTYFKLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           GSK+RKQIVLDGPVNCGKSIALAMLV WAR+EGWLVLYVPSGRRWTHGGFFFKN QTGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTPVQAEDVLRDF+KYNET+LRQLPCQIS+PIPLGEG GVGM KGADSM MPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTH AVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTRPIHA
Sbjct: 301 IDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+GARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAFSE+ WKKIYYL+NGNGAEMRWL P MR
Sbjct: 421 YLRQRLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of Sed0015134 vs. NCBI nr
Match: XP_038895729.1 (28S ribosomal protein S29, mitochondrial [Benincasa hispida])

HSP 1 Score: 805.1 bits (2078), Expect = 3.2e-229
Identity = 406/459 (88.45%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RSIL++TAAASK HL NR    NP PILSL+SNYSAK  K ++KK KKGKS AD KA 
Sbjct: 1   MLRSILKATAAASKSHLCNR----NPFPILSLTSNYSAKVTKSSIKKAKKGKSKADGKAG 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SASAAA+D+LDAALSDDKSRARRLAAEEND SLDVGPNGRPLFTS SS+SQLT KDA
Sbjct: 61  DDLSASAAATDDLDAALSDDKSRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFKFNME LNE LPEGLP GMVKEFEE+MRSAVLVR+SFLDLRDNFRRVVDPSL SPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           GSK+RKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFF+N QTGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFRNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTPVQAEDVL+DFLKYNET LRQLPCQIS+PI LGEGVGVGMMKGADSMTMP+GSTLYDL
Sbjct: 241 DTPVQAEDVLKDFLKYNETCLRQLPCQISEPILLGEGVGVGMMKGADSMTMPDGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMV AFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+GAR+NFPRYSLDEAASV HY
Sbjct: 361 RELAMVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARLNFPRYSLDEAASVVHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAFSE+ WKKIYYL+NGNGAEMRWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDGWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of Sed0015134 vs. ExPASy TrEMBL
Match: A0A6J1DQ31 (28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022041 PE=3 SV=1)

HSP 1 Score: 822.0 bits (2122), Expect = 1.2e-234
Identity = 413/459 (89.98%), Postives = 433/459 (94.34%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RS+LR+ AAASKHHL NR    NPSPILSLSSNYSAKT K  VKK KKGKSNADAKAA
Sbjct: 1   MLRSVLRAAAAASKHHLCNR----NPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAA 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SA+AAASD+LDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTS SS+SQLT KD+
Sbjct: 61  DDPSATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDS 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFKFNME LNE LPEGLP GMVKEFEE+MRSAVLVR+SFL+LRDNFRRVVDPSL SP 
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPD 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           G K+RKQIVLDGPVNCGKS ALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKN QTGLW
Sbjct: 181 GLKIRKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTP+QAEDVLRDFLKYNETRLRQLPCQIS+PIPLGEGVGVGMMKGADSMTMPEGSTLYDL
Sbjct: 241 DTPIQAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTHAAVGVV+RLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTR IHA
Sbjct: 301 IDTGIKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+ ARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAF+E+AWKKIYYL+NGNGAEMRWLVP MR
Sbjct: 421 YLRQRLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of Sed0015134 vs. ExPASy TrEMBL
Match: A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1)

HSP 1 Score: 814.3 bits (2102), Expect = 2.6e-232
Identity = 412/459 (89.76%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RSILR+TAAASKHH  NR    NPSPILS +SNYSAKT KP VKKGKKGKS ADAKA 
Sbjct: 1   MLRSILRATAAASKHHFCNR----NPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAG 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SAS AASD LDAALSDDK+RARRLAAEEND SLDVGPNGRPLFTS SS+SQLT KDA
Sbjct: 61  DDPSAS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFKFNME LNE LPEGLP GMVKEFEE++RSAVLVR+SFLDLRDNFRRVVDPSL SPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           GSK+RKQIVLDGPVNCGKSIALAMLVHWAR+EGWLVLYVPSGRRWTHGGFFFKN QTGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNE RLRQLPCQIS+PIPLGEGVGVGM KGADSM MP+GSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+GARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAFSE  WKKIYYL+NGNGAEMRWL P MR
Sbjct: 421 YLRQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of Sed0015134 vs. ExPASy TrEMBL
Match: A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1)

HSP 1 Score: 814.3 bits (2102), Expect = 2.6e-232
Identity = 412/459 (89.76%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RSILR+TAAASKHH  NR    NPSPILS +SNYSAKT KP VKKGKKGKS ADAKA 
Sbjct: 1   MLRSILRATAAASKHHFCNR----NPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAG 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SAS AASD LDAALSDDK+RARRLAAEEND SLDVGPNGRPLFTS SS+SQLT KDA
Sbjct: 61  DDPSAS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFKFNME LNE LPEGLP GMVKEFEE++RSAVLVR+SFLDLRDNFRRVVDPSL SPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           GSK+RKQIVLDGPVNCGKSIALAMLVHWAR+EGWLVLYVPSGRRWTHGGFFFKN QTGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNE RLRQLPCQIS+PIPLGEGVGVGM KGADSM MP+GSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+GARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAFSE  WKKIYYL+NGNGAEMRWL P MR
Sbjct: 421 YLRQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of Sed0015134 vs. ExPASy TrEMBL
Match: A0A0A0KG66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1)

HSP 1 Score: 812.4 bits (2097), Expect = 9.8e-232
Identity = 408/459 (88.89%), Postives = 430/459 (93.68%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RSILR+T+AASKHH+ NR    NP+PILSL+SNYSAKT KP VKKGKKGKS ADAKA 
Sbjct: 1   MLRSILRATSAASKHHICNR----NPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAG 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SASAAASD+LDAALSDDK RARRLAAEEND SLDVGPNGRPLFTS SS+SQLT KDA
Sbjct: 61  DDPSASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFK+NME LNE LPEGLP GMVKEFEE++RSAVLVR+SFLDLRDNFRRVVDPSL SPA
Sbjct: 121 GTYFKYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           GSK+RKQIVLDGPVNCGKSIALAMLV WAR+EGWLVLYVPSGRRWTHGGFFFKN+QTGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNE +LRQLPCQI +PIPLGEG GVGM KGADSM MPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTH AVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTRPIHA
Sbjct: 301 IDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+GARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAFSE+AWKKIYYL+NGNGAEMRWL P MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of Sed0015134 vs. ExPASy TrEMBL
Match: A0A0A0LVC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1)

HSP 1 Score: 806.6 bits (2082), Expect = 5.4e-230
Identity = 407/459 (88.67%), Postives = 426/459 (92.81%), Query Frame = 0


Query: 1   MFRSILRSTAAASKHHLFNRNPNPNPSPILSLSSNYSAKTAKPNVKKGKKGKSNADAKAA 60
           M RSILR+TAAASKHH  NR    NPSPILSL+SNYSAKT K  VKKGKKGKS ADAKA 
Sbjct: 1   MMRSILRATAAASKHHFSNR----NPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAG 60

Query: 61  DDSSASAAASDELDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSTSSISQLTHKDA 120
           DD SA AAAS++LDAALSDDK RARRLAAEEND SLDVGPNGRPLFTS SS+SQLT KDA
Sbjct: 61  DDPSAPAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEELNEALPEGLPSGMVKEFEEAMRSAVLVRRSFLDLRDNFRRVVDPSLPSPA 180
           GTYFK NME LNE LPEGLP GMVKEFEE++RSAVLVR+SFLDLRDNFRRVVDPSL SPA
Sbjct: 121 GTYFKLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKVRKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNNQTGLW 240
           GSK+RKQIVLDGPVNCGKSIALAMLV WAR+EGWLVLYVPSGRRWTHGGFFFKN QTGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQISDPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
           DTPVQAEDVLRDF+KYNET+LRQLPCQIS+PIPLGEG GVGM KGADSM MPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDVPVLIAIDQYNNWFTFSEYEEAVTVRSTRPIHA 360
           IDTGIKHTH AVGVVVRLRKELSLVKD+PVLIAIDQYNNWFTFSEYEE VTVRSTRPIHA
Sbjct: 301 IDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 KELAMVKAFRSMMHDDMMVGAFTHSTAVGKLRQDLPDVPVGARVNFPRYSLDEAASVFHY 420
           +ELAMVKAFRSMMHDDMMVGAF+HSTAVGKLRQDLPDVP+GARVNFPRYSLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREAFSENAWKKIYYLANGNGAEMRWLVPFMR 460
           YLRQRLIRREAFSE+ WKKIYYL+NGNGAEMRWL P MR
Sbjct: 421 YLRQRLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of Sed0015134 vs. TAIR 10
Match: AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related )

HSP 1 Score: 577.8 bits (1488), Expect = 7.8e-165
Identity = 291/428 (67.99%), Postives = 340/428 (79.44%), Query Frame = 0


Query: 37  SAKTAKPNVKKGKKGKSNADAKAADDSSASAAASDELDAALSDD--KSRARRLAAEENDP 96
           S+K+ K ++ K KK +         D  A+ A   E  AA  DD    RA+RLA +E  P
Sbjct: 53  SSKSTKSSITKTKKSEGKKSKPKGGDPGAAGAEEGEFGAAGGDDLEAGRAKRLADDEKIP 112

Query: 97  SLDVGPNGRPLFT-STSSISQLTHKDAGTYFKFNMEELNEALPEGLPSGMVKEFEEAMRS 156
           SLDVGPNGRPLFT   +++SQLTHKD G+YFKF+   L   LPEGL SG+  EF E+ R 
Sbjct: 113 SLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFNESWRP 172

Query: 157 AVLVRRSFLDLRDNFRRVVDPSL-PSPA-GSKVRKQIVLDGPVNCGKSIALAMLVHWARD 216
           A+LVR+S+L LRDNFRR+ DP + PS + G K++KQIVLDGPV CGKSIALAMLVHWARD
Sbjct: 173 ALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSIALAMLVHWARD 232

Query: 217 EGWLVLYVPSGRRWTHGGFFFKNNQTGLWDTPVQAEDVLRDFLKYNETRLRQLPCQISDP 276
           EGWLVLY P GR WTHGG+F+KN  TG WDTP+QAE++L+DF+K+NE+RLR+L C+I DP
Sbjct: 233 EGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPLQAENILKDFVKFNESRLRELRCKIHDP 292

Query: 277 IPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDVPVL 336
           I LGEG GVG +KGAD+M +PE STLYDL+  GIK THAAV VVVRLRKELS+VKDVPVL
Sbjct: 293 IVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVKDVPVL 352

Query: 337 IAIDQYNNWFTFSEYEEAVTVRSTRPIHAKELAMVKAFRSMMHDDMMVGAFTHSTAVGKL 396
           I IDQYN+WFTFSE+EE VT RS RPIHA+EL  V AFRSMMH+DMMVGAF+HSTAVGKL
Sbjct: 353 IVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHSTAVGKL 412

Query: 397 RQDLPDVPVGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSENAWKKIYYLANGNGAEM 456
           R+DLPDVPV AR  FPRYSLDEA +V +YYLRQRL+RRE F+E  WKKIYYLANGNGAEM
Sbjct: 413 RKDLPDVPVDARQQFPRYSLDEAEAVCYYYLRQRLVRREVFNEENWKKIYYLANGNGAEM 472

Query: 457 RWLVPFMR 460
           RWL PFMR
Sbjct: 473 RWLAPFMR 480

The following BLAST results are available for this feature:

BLAST of Sed0015134 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154896.1	2.5e-234	89.98	28S ribosomal protein S29, mitochondrial [Momordica charantia]	[more]
XP_008457304.1	5.3e-232	89.76	PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1...	[more]
XP_011657272.1	2.0e-231	88.89	28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypotheti...	[more]
XP_004145300.3	8.5e-230	88.67	28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothe...	[more]
XP_038895729.1	3.2e-229	88.45	28S ribosomal protein S29, mitochondrial [Benincasa hispida]	[more]

BLAST of Sed0015134 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015134 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQ31	1.2e-234	89.98	28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7UZA8	2.6e-232	89.76	28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C6G8	2.6e-232	89.76	28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026...	[more]
A0A0A0KG66	9.8e-232	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1	[more]
A0A0A0LVC2	5.4e-230	88.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1	[more]

BLAST of Sed0015134 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16870.1	7.8e-165	67.99	mitochondrial 28S ribosomal protein S29-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019368	Ribosomal protein S23/S29, mitochondrial	PFAM	PF10236	DAP3	coord: 181..382 e-value: 4.9E-31 score: 108.1
IPR019368	Ribosomal protein S23/S29, mitochondrial	PANTHER	PTHR12810	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29	coord: 4..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015134.1	Sed0015134.1	mRNA
Sed0015134.2	Sed0015134.2	mRNA
Sed0015134.3	Sed0015134.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome