Sed0015091 (gene) Chayote v1

Overview


Name	Sed0015091
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein SKIP19-like
Location	LG10: 536442 .. 544597 (+)
RNA-Seq Expression	Sed0015091
Synteny	Sed0015091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAACCAAATCGGTGCTCCAAATCCACCTTTAATGTTTTACTAAAAAAACCAAAATGAACATTTTCATTTAAAAAAAAAAATCACGAAGGAAGGGGAAAAACAAACCCTAGTTCACTGTCATCCAAAATCCAGCAAACCCTATGAATCGGCCGATTAAGCGATCGAGAGCGGTCACTATGATTTGGCCTGAAAAGCGAAGAAACCGCACGTTTCAGTCGGAAAATCCAGAGAGGAACTGGCTCGATCTGCCTCCAGAAGTGTTGTCCATGATTCTGATGAAGCTTAACGCCGTTGAAATCCTCACCAGCGTCCAACACGTCTGCTCTTCCTGGTACAAGATCTGCCAGCAGCCTCACTTGTGGCGTGTGATCGATATGCATAGTTTTGATTACTTGCAACATATGGAGAAGGATTTGGAGGGCATGTGCTTCGCCGCCGTTCACCGCAGTCGCGGCCAAGTCGTCGACATCGCCATTGCTTTCTTTGGCACTGATGCCTTGCTCCAATACATCGCGCTCGAGTATGTTCTTCTTCTCAATTCTGTACTCTCAATACATGATAGCATAGATTCATGCCGTAGCTTCATGATTCTTTACTTTCTTTCTAGGCTGTTTGTTCTATTCTAGATAGAGTGAAATCTGCTTCTAATCGTTGGCAGTTGCTGTGATTGTTTATAAATTTGCTTAAAACCTTTGGTAGTTGCTGTGATTGTTTATAAATCAGCTCAAAACCTTTGGCAGTTGCTGTGATTGTTTATAATTCGGCTTTAAACATTTGGTAGTTCCTGTGTTTGTTTATAAATAGGCTTTAAACCTTTGGTAGTTGCTGTGATTGTTATGAAATCAGCCTCGTTCTGTTCTCGAACTCGCGGTTTTGCCAATGTTCGGTTTTTCCTATTTTTGCTGTTTTTTTTAATTCAACAACATTTGAGTATGGATTCGAATACAGTCTATATCTCTGTTATGATCTTTGAATAAATTTTGCTTCTTTCCTTAATGTCTGTGTTATACAAATCAGAGATAGTCCATTTCCATACCCAGTATCAGATCATCTACAAGTCAGTGATGGTCCATGTAAGGGTACTACTTAACATATAGATGTAATTCTGACTTTTAGCAACTAACACTGAAGTGGTTATCTTATTGACAAGTTTTCTCAGATGGTATTCATGTGTTTAGTAATATAACTTTCTATTCTCAACCATGGGTTGGCCTAGTAGAGTCAACAGGGCCTTGAAGAACCAAAGTGTTGTTAGTTCAATCAATAGTTGCTAAGTGCCTAAAAATTAGTTGTCTACTAGTTTTATTGGCATCTAAATGATGTAGGGTCAGGTGGCTTATTCGCTTAGAATAGTCGCAAGCATAAGCAGGCCTTCACACTCACAAATATAAGTTTTCATTCTCACATTTTATTTTCAAGAGTTCCATATTTCTTTGATATTTATGTTTCTTTCTCTATATGTCTACTTGCTTGCAGATCAAACCAACAACTCAAAAGACTGAGTATTTCAGGTTGCGATGACATCTCAGATGAGGGATTGGTTGGAGCAGTTTCAAAACTTCCATTGTTAGAAAATCTTGAAATAACTTTATGTTCAATTAATGTGGAAAGTTTGAAAACAATTGGACGCTGTTGCCCTATTTTGAAAACTCTGGAACTGTACGAAAATCTATGGTATGGACAACAGACGGGACGTGACATGGAAGCCCTTGCTATTGCTGAAACTATGCCTAAGTTACGTCGGCTTGGGATAATTGGCAATACCCTAACCGACAGGGGCTTGCAGGCCATTCTAAATGGTTGTCCCGAATTAGAATGTCTCAACTTAAATCGATGTTTCAATTTGAAATTCGAGGGACAATTGAGACAAAAATGTGCTGAAAGGATCAAAACTTTATACATGCCTCTTTGATCCTACTCTTCCCTGTGGTCGACCATAGTATCGATATGGATTACTATTGTTAAGAATGACAAGAAGTGTTAAATATTATGCAAGATTTGTTAGGAGATTATCTAAGATTTTATATTTTGTTTTCTATGCATACATATTTGTGTAAAGTTAATGACAAATGAACAATGTGAAAGTTTAGGCCTTTTTCAAAGTTTATCAACTATCTTGAATTTTCTCGGTTGTACTAATTTCTCCAACTATGATGATTACCCAAGTTTTTATGGGATTAA

mRNA sequence

CTTAACCAAATCGGTGCTCCAAATCCACCTTTAATGTTTTACTAAAAAAACCAAAATGAACATTTTCATTTAAAAAAAAAAATCACGAAGGAAGGGGAAAAACAAACCCTAGTTCACTGTCATCCAAAATCCAGCAAACCCTATGAATCGGCCGATTAAGCGATCGAGAGCGGTCACTATGATTTGGCCTGAAAAGCGAAGAAACCGCACGTTTCAGTCGGAAAATCCAGAGAGGAACTGGCTCGATCTGCCTCCAGAAGTGTTGTCCATGATTCTGATGAAGCTTAACGCCGTTGAAATCCTCACCAGCGTCCAACACGTCTGCTCTTCCTGGTACAAGATCTGCCAGCAGCCTCACTTGTGGCGTGTGATCGATATGCATAGTTTTGATTACTTGCAACATATGGAGAAGGATTTGGAGGGCATGTGCTTCGCCGCCGTTCACCGCAGTCGCGGCCAAGTCGTCGACATCGCCATTGCTTTCTTTGGCACTGATGCCTTGCTCCAATACATCGCGCTCGAATCAAACCAACAACTCAAAAGACTGAGTATTTCAGGTTGCGATGACATCTCAGATGAGGGATTGGTTGGAGCAGTTTCAAAACTTCCATTGTTAGAAAATCTTGAAATAACTTTATGTTCAATTAATGTGGAAAGTTTGAAAACAATTGGACGCTGTTGCCCTATTTTGAAAACTCTGGAACTGTACGAAAATCTATGGTATGGACAACAGACGGGACGTGACATGGAAGCCCTTGCTATTGCTGAAACTATGCCTAAGTTACGTCGGCTTGGGATAATTGGCAATACCCTAACCGACAGGGGCTTGCAGGCCATTCTAAATGGTTGTCCCGAATTAGAATGTCTCAACTTAAATCGATGTTTCAATTTGAAATTCGAGGGACAATTGAGACAAAAATGTGCTGAAAGGATCAAAACTTTATACATGCCTCTTTGATCCTACTCTTCCCTGTGGTCGACCATAGTATCGATATGGATTACTATTGTTAAGAATGACAAGAAGTGTTAAATATTATGCAAGATTTGTTAGGAGATTATCTAAGATTTTATATTTTGTTTTCTATGCATACATATTTGTGTAAAGTTAATGACAAATGAACAATGTGAAAGTTTAGGCCTTTTTCAAAGTTTATCAACTATCTTGAATTTTCTCGGTTGTACTAATTTCTCCAACTATGATGATTACCCAAGTTTTTATGGGATTAA

Coding sequence (CDS)

ATGAATCGGCCGATTAAGCGATCGAGAGCGGTCACTATGATTTGGCCTGAAAAGCGAAGAAACCGCACGTTTCAGTCGGAAAATCCAGAGAGGAACTGGCTCGATCTGCCTCCAGAAGTGTTGTCCATGATTCTGATGAAGCTTAACGCCGTTGAAATCCTCACCAGCGTCCAACACGTCTGCTCTTCCTGGTACAAGATCTGCCAGCAGCCTCACTTGTGGCGTGTGATCGATATGCATAGTTTTGATTACTTGCAACATATGGAGAAGGATTTGGAGGGCATGTGCTTCGCCGCCGTTCACCGCAGTCGCGGCCAAGTCGTCGACATCGCCATTGCTTTCTTTGGCACTGATGCCTTGCTCCAATACATCGCGCTCGAATCAAACCAACAACTCAAAAGACTGAGTATTTCAGGTTGCGATGACATCTCAGATGAGGGATTGGTTGGAGCAGTTTCAAAACTTCCATTGTTAGAAAATCTTGAAATAACTTTATGTTCAATTAATGTGGAAAGTTTGAAAACAATTGGACGCTGTTGCCCTATTTTGAAAACTCTGGAACTGTACGAAAATCTATGGTATGGACAACAGACGGGACGTGACATGGAAGCCCTTGCTATTGCTGAAACTATGCCTAAGTTACGTCGGCTTGGGATAATTGGCAATACCCTAACCGACAGGGGCTTGCAGGCCATTCTAAATGGTTGTCCCGAATTAGAATGTCTCAACTTAAATCGATGTTTCAATTTGAAATTCGAGGGACAATTGAGACAAAAATGTGCTGAAAGGATCAAAACTTTATACATGCCTCTTTGA

Protein sequence

MNRPIKRSRAVTMIWPEKRRNRTFQSENPERNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLKRLSISGCDDISDEGLVGAVSKLPLLENLEITLCSINVESLKTIGRCCPILKTLELYENLWYGQQTGRDMEALAIAETMPKLRRLGIIGNTLTDRGLQAILNGCPELECLNLNRCFNLKFEGQLRQKCAERIKTLYMPL

Homology

[Close]

BLAST of Sed0015091 vs. NCBI nr
Match: XP_038883506.1 (F-box protein SKIP19-like [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 4.9e-85
Identity = 174/283 (61.48%), Postives = 208/283 (73.50%), Query Frame = 0


Query: 21  NRTFQSENPERNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMH 80
           N   QSE   RNWLDLP EV+SMIL+KL A+EILTS Q+VCSSW KIC+ P +WRVIDM 
Sbjct: 4   NSVIQSEAEARNWLDLPAEVMSMILLKLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMR 63

Query: 81  SFDYLQHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVC 140
           +   L  M+ DLE MC  AV RS GQ++DI I +FGTD LLQYI   SN QLRRLR+  C
Sbjct: 64  NSGNLYDMDHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITQSSN-QLRRLRLADC 123

Query: 141 YDISDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIM 200
           YDISDEGL EA+ +LPLLEHLEIF+ S  +  +TL+TVGRCCPLLK LKL ++    + M
Sbjct: 124 YDISDEGLTEAISRLPLLEHLEIFIYS--FDVETLKTVGRCCPLLKWLKLIEEQYWREDM 183

Query: 201 VSDMEALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQ 260
           V++ EALAIAE+MPKL +LQI GNGLT+ GLQAILDGCPDLESLDL QCF+L+  G L +
Sbjct: 184 VTNKEALAIAETMPKLRHLQIIGNGLTNMGLQAILDGCPDLESLDLRQCFHLNLNGQLGK 243

Query: 261 KCAERIKTLHLPHD--PTGYGFITEIIDYPDYISDEYGSEDED 302
           +CAER K LHLPHD    G+    + I + D     + SEDED
Sbjct: 244 ECAERFKVLHLPHDRLTNGHECTNKTIHFGD-----HDSEDED 278

[Close]

BLAST of Sed0015091 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia])

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-80
Identity = 171/288 (59.38%), Postives = 204/288 (70.83%), Query Frame = 0


Query: 26  SENPERNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYL 85
           S +  RNWL+LP ++ SMIL+KL A+EIL+S Q VCS W KIC+ P +WRV+DMH+    
Sbjct: 7   SGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW 66

Query: 86  QHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISD 145
             M+ DLE MC  AV RS G+++DI I +FGT+ LLQYI   SN QLRRLRIV C+ I+D
Sbjct: 67  D-MDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSN-QLRRLRIVRCHSITD 126

Query: 146 EGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDME 205
            GL EAV KLPLLEHLEI LCS  +  KTL TVGRCC LLK+LKL+ Q  R  ++  D +
Sbjct: 127 TGLSEAVSKLPLLEHLEISLCS--FTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRD 186

Query: 206 ALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAER 265
           A+AIAE+MP L YLQIFG+ LTDRGLQAILDGCPDLESLDL QCFNL   G L  +CAER
Sbjct: 187 AIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAER 246

Query: 266 IKTLHLPHDPT-GYGFITEI----------IDYPDYISD-EYGSEDED 302
           IK L LPHDPT  Y FI E            DYP   SD ++ +ED+D
Sbjct: 247 IKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD 290

[Close]

BLAST of Sed0015091 vs. NCBI nr
Match: XP_022146724.1 (putative F-box/LRR-repeat protein 23 [Momordica charantia])

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-77
Identity = 156/256 (60.94%), Postives = 188/256 (73.44%), Query Frame = 0


Query: 21  NRTFQSENPERNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMH 80
           N    SE P RNWL+LP +  SMILMKL AV+IL++ Q VCS W KIC  P +WRV+DM 
Sbjct: 4   NSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMR 63

Query: 81  SFDYLQHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVC 140
           + D    M+KDLE MC  AV RS GQ+VDI I  FGTD LL YIA  SN QLRRLR+V C
Sbjct: 64  NLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQSSN-QLRRLRLVYC 123

Query: 141 YDISDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRG-QI 200
           +DIS +GL EAVPKLPLLE LEIF   + +  +TL+TVGRCCPLL +LKL+ +  +G ++
Sbjct: 124 HDISGKGLAEAVPKLPLLEDLEIFFSFDSFDMETLKTVGRCCPLLNSLKLHNRNCKGPRL 183

Query: 201 MVSDMEALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLK 260
           M  D EALAIAE+MP L +L IF N LTD GLQAILDGCP LESLDL  C NL+  G L+
Sbjct: 184 MGCDEEALAIAENMPNLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLE 243

Query: 261 QKCAERIKTLHLPHDP 276
           +KC++RIK+L LP+DP
Sbjct: 244 KKCSKRIKSLQLPYDP 258

[Close]

BLAST of Sed0015091 vs. NCBI nr
Match: KAG7034751.1 (Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.4 bits (768), Expect = 1.7e-77
Identity = 162/267 (60.67%), Postives = 194/267 (72.66%), Query Frame = 0


Query: 31  RNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEK 90
           RNWL+LP +V SMIL+KL  V+ILT+ Q VCSSW KIC+ P +WRV+DM        M+ 
Sbjct: 17  RNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDY 76

Query: 91  DLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEGLIE 150
           DLE MC  AV RS GQ++ I I  FGTD LLQYI   SN QLR+LR+V C  ISDEGLI+
Sbjct: 77  DLEEMCRQAVDRSCGQLIYINIEHFGTDDLLQYITQSSN-QLRKLRLVYCNRISDEGLIK 136

Query: 151 AVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEALAIA 210
           AV KLPLLE LEI   S  +  +TL T+G+C PLLK+LKLN+QF R   +  D  ALAIA
Sbjct: 137 AVSKLPLLEDLEISFGS--FDVETLETLGQCRPLLKSLKLNRQFYRR--VECDKGALAIA 196

Query: 211 ESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAERIKTLH 270
           E+MP L +LQIFGN LT+RGL+AILDGCPDLESLDL QCFNL+  G L  KC+E+IK L 
Sbjct: 197 ENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLR 256

Query: 271 LPHDPT-GYGFITEIIDYPDYISDEYG 297
           LPHDPT  Y F TEI++Y D   ++YG
Sbjct: 257 LPHDPTDDYEFSTEIVEYGDDYEEDYG 278

[Close]

BLAST of Sed0015091 vs. NCBI nr
Match: XP_022925897.1 (F-box protein SKIP19-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 300.1 bits (767), Expect = 2.2e-77
Identity = 162/267 (60.67%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 31  RNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEK 90
           RNWL+LP +V SMIL+KL  V+ILT+ Q VCSSW KIC+ P +WRV+DM        M+ 
Sbjct: 17  RNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDY 76

Query: 91  DLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEGLIE 150
           DLE MC  AV RS GQ++ I I  FGTD LLQYI   SN QLR LR+V C  ISDEGLI+
Sbjct: 77  DLEEMCRQAVDRSCGQLIYIKIEHFGTDDLLQYITQSSN-QLRELRLVYCNRISDEGLIK 136

Query: 151 AVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEALAIA 210
           AV KLPLLE LEI   S  +  +TL T+G+C PLLK+LKLN+QF R   +  D  ALAIA
Sbjct: 137 AVSKLPLLEDLEISFGS--FDVETLETLGQCRPLLKSLKLNRQFYRR--VECDKGALAIA 196

Query: 211 ESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAERIKTLH 270
           E+MP L +LQIFGN LT+RGL+AILDGCPDLESLDL QCFNL+  G L  KC+E+IK L 
Sbjct: 197 ENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLR 256

Query: 271 LPHDPT-GYGFITEIIDYPDYISDEYG 297
           LPHDPT  Y F TEI++Y D   ++YG
Sbjct: 257 LPHDPTDDYEFSTEIVEYGDDYEEDYG 278

[Close]

BLAST of Sed0015091 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.7e-62
Identity = 127/279 (45.52%), Postives = 183/279 (65.59%), Query Frame = 0


Query: 9   RAVTMIWPEKRRNRTFQSENP---------ERNWLDLPPEVLSMILMKLNAVEILTSVQH 68
           R+   I+P+K  + +  S  P          RNW +LP ++ S IL++L A+EIL + Q 
Sbjct: 148 RSDNFIYPKKIASSSSLSSTPLPSLMKDKKLRNWAELPSKLTSSILLRLGAIEILQNAQK 207

Query: 69  VCSSWYKICQQPHLWRVIDMHSFDYLQHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDA 128
           VC  W+++C+ P +WR ID+ + +     + DLE MC  AV RS G +++I I ++GT+ 
Sbjct: 208 VCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTND 267

Query: 129 LLQYIALESNQQLRRLRIVVCYDISDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVG 188
           L+ YIA + +  L+ L +V C+ I+DEG+ +AV K+PLLE+LE+  C  ++  ++LR +G
Sbjct: 268 LIMYIA-DRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYC--LFSGESLRDIG 327

Query: 189 RCCPLLKTLKLNKQFGRGQIMVS----DMEALAIAESMPKLCYLQIFGNGLTDRGLQAIL 248
           R CP LKTLKLN+     +IM S    D  A AIAESMP+L +LQ+ GNGLT++GL AIL
Sbjct: 328 RSCPNLKTLKLNR---APEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAIL 387

Query: 249 DGCPDLESLDLHQCFNLSFKGPLKQKCAERIKTLHLPHD 275
           DGCP LE LDL QCFN++  G LK++C ERIK L  P+D
Sbjct: 388 DGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCPND 420

[Close]

BLAST of Sed0015091 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.0e-61
Identity = 124/243 (51.03%), Postives = 168/243 (69.14%), Query Frame = 0


Query: 32  NWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEKD 91
           NW +LPPE+ S IL +L A+EIL + Q VC SW ++C+ P +WR IDMH+   L  M+ +
Sbjct: 18  NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYN 77

Query: 92  LEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEGLIEA 151
           LE MC  AV RS+G +VDI I +FGT  LL YIA  S+  LR LR++ C  I+D+G +EA
Sbjct: 78  LEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSS-NLRSLRLIRCSQITDDGFVEA 137

Query: 152 VPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEALAIAE 211
           V KLP LE LE+  CS  +  ++LR VG+CC  +KTLKLNK   +     +D +ALAIAE
Sbjct: 138 VVKLP-LEELELSYCS--FSVESLRVVGQCCLNMKTLKLNKHPQK----ENDDDALAIAE 197

Query: 212 SMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAERIKTLHL 271
           +MPKL +LQ+ GNGL+D GL AILD C +LE LDL +CFN++  G L+++C E +K +  
Sbjct: 198 TMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRH 252

Query: 272 PHD 275
           P+D
Sbjct: 258 PND 252

[Close]

BLAST of Sed0015091 vs. ExPASy Swiss-Prot
Match: Q9M0U7 (Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE=4 SV=2)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 121/290 (41.72%), Postives = 176/290 (60.69%), Query Frame = 0


Query: 18  KRRNRT---FQSENPER-NWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHL 77
           KRR  +    + ++ ER NW+DLPPE+ + IL++L+  +IL + + +C +W +IC+ P +
Sbjct: 21  KRRTTSTMFLKKDDEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSM 80

Query: 78  WRVIDMHSFDYLQHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLR 137
           WR I++   D L + E D E MC   V  S+G +++I I  F +D+LL YI ++ +  L+
Sbjct: 81  WRKINLR--DCLMY-EFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYI-VDRSCNLK 140

Query: 138 RLRIVVCYDISDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLN-- 197
            L I +   ++++G++  + KLPLLE L IF  S       L+ +G  CP LKTLKLN  
Sbjct: 141 SLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSS---IKLDLKAIGHACPQLKTLKLNSL 200

Query: 198 --------KQFGRGQIMVSDMEALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLES 257
                    Q G   ++  D +ALAIAESMPKL +LQ+ GNGLT+ GL AILDGCP LE 
Sbjct: 201 GSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEE 260

Query: 258 -LDLHQCFNLSFKGPLKQKCAERIKTLHLPHDPTGYGFITEIIDYPDYIS 293
            LD+ +CFN++  G L+++C +RIK L  PHD T         DYP  IS
Sbjct: 261 HLDVRKCFNINLVGNLEKRCMKRIKELRRPHDSTA--------DYPYSIS 295

[Close]

BLAST of Sed0015091 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.5e-49
Identity = 119/280 (42.50%), Postives = 170/280 (60.71%), Query Frame = 0


Query: 25  QSENPERNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDY 84
           + E    NW +LPP++LS IL++L+ +EIL + + VC SW ++ + P +WR IDM +   
Sbjct: 19  KGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRR 78

Query: 85  LQHMEKDLEGMCFAAVHRSRGQVVDIAIA--FFGTDALLQYIALESNQQLRRLRIVVCYD 144
           L +    +E  C   V  S+G +++  I    F T +LL Y+A E +  LRRLR V    
Sbjct: 79  L-YCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMA-ERSSNLRRLR-VKGGQ 138

Query: 145 ISDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVS 204
           I+  G+ EA+ KLPLLE LE+  CS   + +  +T+G+ CP LKTLKL   +    +  S
Sbjct: 139 ITSVGIFEAIVKLPLLEELELLYCS--IEEEHFKTIGQACPNLKTLKLVGFW--SHLNES 198

Query: 205 DMEALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKC 264
           D +ALAIA++MP L +LQ+  NGLT+ GL AILDGCP LE LDL QCFN++  G L+++C
Sbjct: 199 DNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQC 258

Query: 265 AERIKTLHLPHDP-TGYGFITEIIDYPDYISDEYGSEDED 302
            ERIK    P+D    Y ++  I      I DE G E+E+
Sbjct: 259 LERIKDFRCPNDVLDDYNYV--IFSDNGSIEDEKGEEEEN 289

[Close]

BLAST of Sed0015091 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.2e-48
Identity = 103/231 (44.59%), Postives = 149/231 (64.50%), Query Frame = 0


Query: 31  RNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEK 90
           RNW +LPPE+ S IL++L A+EIL + Q VC SW ++CQ P +WR ID+   + L +  +
Sbjct: 19  RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVE 78

Query: 91  ---DLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEG 150
               +E +C  AV  S+G +++I I +    + L YIA + +  LRRL +V C  +   G
Sbjct: 79  LFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIA-DRSSNLRRLGVVDCAPVLSRG 138

Query: 151 LIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEAL 210
           ++EA  KLPLLE L+I   S+I + + L+ VG+ CP L+TLKLN     G +   D  AL
Sbjct: 139 VVEAAMKLPLLEELDITYKSSI-REQELKVVGQSCPNLRTLKLN---CTGDVKCCDKVAL 198

Query: 211 AIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPL 259
           AIAE+MP L +LQ+F NGL++ GL AIL+GCP L++L LHQC N++  G +
Sbjct: 199 AIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDI 244

[Close]

BLAST of Sed0015091 vs. ExPASy TrEMBL
Match: A0A6J1CXS5 (F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 6.1e-81
Identity = 171/288 (59.38%), Postives = 204/288 (70.83%), Query Frame = 0


Query: 26  SENPERNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYL 85
           S +  RNWL+LP ++ SMIL+KL A+EIL+S Q VCS W KIC+ P +WRV+DMH+    
Sbjct: 7   SGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW 66

Query: 86  QHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISD 145
             M+ DLE MC  AV RS G+++DI I +FGT+ LLQYI   SN QLRRLRIV C+ I+D
Sbjct: 67  D-MDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSN-QLRRLRIVRCHSITD 126

Query: 146 EGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDME 205
            GL EAV KLPLLEHLEI LCS  +  KTL TVGRCC LLK+LKL+ Q  R  ++  D +
Sbjct: 127 TGLSEAVSKLPLLEHLEISLCS--FTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRD 186

Query: 206 ALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAER 265
           A+AIAE+MP L YLQIFG+ LTDRGLQAILDGCPDLESLDL QCFNL   G L  +CAER
Sbjct: 187 AIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAER 246

Query: 266 IKTLHLPHDPT-GYGFITEI----------IDYPDYISD-EYGSEDED 302
           IK L LPHDPT  Y FI E            DYP   SD ++ +ED+D
Sbjct: 247 IKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD 290

[Close]

BLAST of Sed0015091 vs. ExPASy TrEMBL
Match: A0A6J1CYW9 (putative F-box/LRR-repeat protein 23 OS=Momordica charantia OX=3673 GN=LOC111015857 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 6.3e-78
Identity = 156/256 (60.94%), Postives = 188/256 (73.44%), Query Frame = 0


Query: 21  NRTFQSENPERNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMH 80
           N    SE P RNWL+LP +  SMILMKL AV+IL++ Q VCS W KIC  P +WRV+DM 
Sbjct: 4   NSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMR 63

Query: 81  SFDYLQHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVC 140
           + D    M+KDLE MC  AV RS GQ+VDI I  FGTD LL YIA  SN QLRRLR+V C
Sbjct: 64  NLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQSSN-QLRRLRLVYC 123

Query: 141 YDISDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRG-QI 200
           +DIS +GL EAVPKLPLLE LEIF   + +  +TL+TVGRCCPLL +LKL+ +  +G ++
Sbjct: 124 HDISGKGLAEAVPKLPLLEDLEIFFSFDSFDMETLKTVGRCCPLLNSLKLHNRNCKGPRL 183

Query: 201 MVSDMEALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLK 260
           M  D EALAIAE+MP L +L IF N LTD GLQAILDGCP LESLDL  C NL+  G L+
Sbjct: 184 MGCDEEALAIAENMPNLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLE 243

Query: 261 QKCAERIKTLHLPHDP 276
           +KC++RIK+L LP+DP
Sbjct: 244 KKCSKRIKSLQLPYDP 258

[Close]

BLAST of Sed0015091 vs. ExPASy TrEMBL
Match: A0A6J1EGI8 (F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 162/267 (60.67%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 31  RNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEK 90
           RNWL+LP +V SMIL+KL  V+ILT+ Q VCSSW KIC+ P +WRV+DM        M+ 
Sbjct: 17  RNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDY 76

Query: 91  DLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEGLIE 150
           DLE MC  AV RS GQ++ I I  FGTD LLQYI   SN QLR LR+V C  ISDEGLI+
Sbjct: 77  DLEEMCRQAVDRSCGQLIYIKIEHFGTDDLLQYITQSSN-QLRELRLVYCNRISDEGLIK 136

Query: 151 AVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEALAIA 210
           AV KLPLLE LEI   S  +  +TL T+G+C PLLK+LKLN+QF R   +  D  ALAIA
Sbjct: 137 AVSKLPLLEDLEISFGS--FDVETLETLGQCRPLLKSLKLNRQFYRR--VECDKGALAIA 196

Query: 211 ESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAERIKTLH 270
           E+MP L +LQIFGN LT+RGL+AILDGCPDLESLDL QCFNL+  G L  KC+E+IK L 
Sbjct: 197 ENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLR 256

Query: 271 LPHDPT-GYGFITEIIDYPDYISDEYG 297
           LPHDPT  Y F TEI++Y D   ++YG
Sbjct: 257 LPHDPTDDYEFSTEIVEYGDDYEEDYG 278

[Close]

BLAST of Sed0015091 vs. ExPASy TrEMBL
Match: A0A6J1ECV6 (F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 162/267 (60.67%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 31  RNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEK 90
           RNWL+LP +V SMIL+KL  V+ILT+ Q VCSSW KIC+ P +WRV+DM        M+ 
Sbjct: 17  RNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDY 76

Query: 91  DLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEGLIE 150
           DLE MC  AV RS GQ++ I I  FGTD LLQYI   SN QLR LR+V C  ISDEGLI+
Sbjct: 77  DLEEMCRQAVDRSCGQLIYIKIEHFGTDDLLQYITQSSN-QLRELRLVYCNRISDEGLIK 136

Query: 151 AVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEALAIA 210
           AV KLPLLE LEI   S  +  +TL T+G+C PLLK+LKLN+QF R   +  D  ALAIA
Sbjct: 137 AVSKLPLLEDLEISFGS--FDVETLETLGQCRPLLKSLKLNRQFYRR--VECDKGALAIA 196

Query: 211 ESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAERIKTLH 270
           E+MP L +LQIFGN LT+RGL+AILDGCPDLESLDL QCFNL+  G L  KC+E+IK L 
Sbjct: 197 ENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLR 256

Query: 271 LPHDPT-GYGFITEIIDYPDYISDEYG 297
           LPHDPT  Y F TEI++Y D   ++YG
Sbjct: 257 LPHDPTDDYEFSTEIVEYGDDYEEDYG 278

[Close]

BLAST of Sed0015091 vs. ExPASy TrEMBL
Match: A0A6J1ILH5 (F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 3.1e-77
Identity = 161/267 (60.30%), Postives = 192/267 (71.91%), Query Frame = 0


Query: 31  RNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEK 90
           RNWL+LP +V SMIL+KL  V+ILT+ Q VCSSW KIC+ P +WRV+DM        M+ 
Sbjct: 17  RNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMDY 76

Query: 91  DLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEGLIE 150
           DLE MC  AV RS GQ++ I I  FGTD LLQYI   SN QLR+LR+V C  ISDEG I+
Sbjct: 77  DLEEMCRQAVDRSCGQLIYINIEHFGTDDLLQYITQSSN-QLRKLRLVYCNRISDEGFIK 136

Query: 151 AVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEALAIA 210
           AV KLPLLE LEI   S  +  +TL T+G C PLLK+LKLN+QF R   +  D  ALAIA
Sbjct: 137 AVSKLPLLEDLEISFGS--FDVETLETLGHCRPLLKSLKLNRQFYRR--VECDKGALAIA 196

Query: 211 ESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAERIKTLH 270
           E+MP L +LQIFGN LT+RGL+AILDGCPDLESLDL QCFNL+  G L  KC+E+IK L 
Sbjct: 197 ENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLR 256

Query: 271 LPHDPT-GYGFITEIIDYPDYISDEYG 297
           LPHDPT  Y F TEI++Y D   ++YG
Sbjct: 257 LPHDPTDDYEFSTEIVEYGDDYEEDYG 278

[Close]

BLAST of Sed0015091 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein )

HSP 1 Score: 236.9 bits (603), Expect = 2.1e-62
Identity = 124/243 (51.03%), Postives = 168/243 (69.14%), Query Frame = 0


Query: 32  NWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEKD 91
           NW +LPPE+ S IL +L A+EIL + Q VC SW ++C+ P +WR IDMH+   L  M+ +
Sbjct: 18  NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYN 77

Query: 92  LEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEGLIEA 151
           LE MC  AV RS+G +VDI I +FGT  LL YIA  S+  LR LR++ C  I+D+G +EA
Sbjct: 78  LEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSS-NLRSLRLIRCSQITDDGFVEA 137

Query: 152 VPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEALAIAE 211
           V KLP LE LE+  CS  +  ++LR VG+CC  +KTLKLNK   +     +D +ALAIAE
Sbjct: 138 VVKLP-LEELELSYCS--FSVESLRVVGQCCLNMKTLKLNKHPQK----ENDDDALAIAE 197

Query: 212 SMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKCAERIKTLHL 271
           +MPKL +LQ+ GNGL+D GL AILD C +LE LDL +CFN++  G L+++C E +K +  
Sbjct: 198 TMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVKVVRH 252

Query: 272 PHD 275
           P+D
Sbjct: 258 PND 252

[Close]

BLAST of Sed0015091 vs. TAIR 10
Match: AT4G05475.1 (RNI-like superfamily protein )

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-51
Identity = 121/290 (41.72%), Postives = 176/290 (60.69%), Query Frame = 0


Query: 18  KRRNRT---FQSENPER-NWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHL 77
           KRR  +    + ++ ER NW+DLPPE+ + IL++L+  +IL + + +C +W +IC+ P +
Sbjct: 21  KRRTTSTMFLKKDDEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSM 80

Query: 78  WRVIDMHSFDYLQHMEKDLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLR 137
           WR I++   D L + E D E MC   V  S+G +++I I  F +D+LL YI ++ +  L+
Sbjct: 81  WRKINLR--DCLMY-EFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYI-VDRSCNLK 140

Query: 138 RLRIVVCYDISDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLN-- 197
            L I +   ++++G++  + KLPLLE L IF  S       L+ +G  CP LKTLKLN  
Sbjct: 141 SLGISIYEPMTNKGVMNGIEKLPLLETLVIFHSS---IKLDLKAIGHACPQLKTLKLNSL 200

Query: 198 --------KQFGRGQIMVSDMEALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLES 257
                    Q G   ++  D +ALAIAESMPKL +LQ+ GNGLT+ GL AILDGCP LE 
Sbjct: 201 GSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEE 260

Query: 258 -LDLHQCFNLSFKGPLKQKCAERIKTLHLPHDPTGYGFITEIIDYPDYIS 293
            LD+ +CFN++  G L+++C +RIK L  PHD T         DYP  IS
Sbjct: 261 HLDVRKCFNINLVGNLEKRCMKRIKELRRPHDSTA--------DYPYSIS 295

[Close]

BLAST of Sed0015091 vs. TAIR 10
Match: AT4G05490.1 (RNI-like superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 2.5e-50
Identity = 119/280 (42.50%), Postives = 170/280 (60.71%), Query Frame = 0


Query: 25  QSENPERNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDY 84
           + E    NW +LPP++LS IL++L+ +EIL + + VC SW ++ + P +WR IDM +   
Sbjct: 19  KGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRR 78

Query: 85  LQHMEKDLEGMCFAAVHRSRGQVVDIAIA--FFGTDALLQYIALESNQQLRRLRIVVCYD 144
           L +    +E  C   V  S+G +++  I    F T +LL Y+A E +  LRRLR V    
Sbjct: 79  L-YCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMA-ERSSNLRRLR-VKGGQ 138

Query: 145 ISDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVS 204
           I+  G+ EA+ KLPLLE LE+  CS   + +  +T+G+ CP LKTLKL   +    +  S
Sbjct: 139 ITSVGIFEAIVKLPLLEELELLYCS--IEEEHFKTIGQACPNLKTLKLVGFW--SHLNES 198

Query: 205 DMEALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPLKQKC 264
           D +ALAIA++MP L +LQ+  NGLT+ GL AILDGCP LE LDL QCFN++  G L+++C
Sbjct: 199 DNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQC 258

Query: 265 AERIKTLHLPHDP-TGYGFITEIIDYPDYISDEYGSEDED 302
            ERIK    P+D    Y ++  I      I DE G E+E+
Sbjct: 259 LERIKDFRCPNDVLDDYNYV--IFSDNGSIEDEKGEEEEN 289

[Close]

BLAST of Sed0015091 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-49
Identity = 103/231 (44.59%), Postives = 149/231 (64.50%), Query Frame = 0


Query: 31  RNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVIDMHSFDYLQHMEK 90
           RNW +LPPE+ S IL++L A+EIL + Q VC SW ++CQ P +WR ID+   + L +  +
Sbjct: 19  RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVE 78

Query: 91  ---DLEGMCFAAVHRSRGQVVDIAIAFFGTDALLQYIALESNQQLRRLRIVVCYDISDEG 150
               +E +C  AV  S+G +++I I +    + L YIA + +  LRRL +V C  +   G
Sbjct: 79  LFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIA-DRSSNLRRLGVVDCAPVLSRG 138

Query: 151 LIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGRGQIMVSDMEAL 210
           ++EA  KLPLLE L+I   S+I + + L+ VG+ CP L+TLKLN     G +   D  AL
Sbjct: 139 VVEAAMKLPLLEELDITYKSSI-REQELKVVGQSCPNLRTLKLN---CTGDVKCCDKVAL 198

Query: 211 AIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQCFNLSFKGPL 259
           AIAE+MP L +LQ+F NGL++ GL AIL+GCP L++L LHQC N++  G +
Sbjct: 199 AIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDI 244

[Close]

BLAST of Sed0015091 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-46
Identity = 111/280 (39.64%), Postives = 163/280 (58.21%), Query Frame = 0


Query: 31  RNWLDLPPEVLSMILMKLNAVEILTSVQHVCSSWYKICQQPHLWRVID-----MHSFDYL 90
           RNW+DLPPE+ + IL++L+  +IL + Q VC  W +IC+ P +WR I+     M++FD++
Sbjct: 44  RNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLMYNFDFV 103

Query: 91  QHMEKDLEGMCFAAVHRSRGQVVDIAI-AFFGTDALLQYIALESNQQLRRLRIVVCYD-I 150
                    MC   V  S+G +++I +   F +D+LL YI   +++ LR L + +C+  +
Sbjct: 104 --------SMCRHIVDLSQGGLLEINVDEHFLSDSLLSYI---TDRNLRSLGLGMCFPRV 163

Query: 151 SDEGLIEAVPKLPLLEHLEIFLCSNIWKSKTLRTVGRCCPLLKTLKLNKQFGR------- 210
           +  G++ A+ K+PLLE LE+   ++      L+ +G  CP LKTLKLN   GR       
Sbjct: 164 TKLGVVNAIAKIPLLETLEV---THSCIKLDLKAIGHACPQLKTLKLN-SLGRLWPASDK 223

Query: 211 -GQIMVSDM-------EALAIAESMPKLCYLQIFGNGLTDRGLQAILDGCPDLESLDLHQ 270
               ++ DM       +ALAIAESMPKL +LQ+  N LT+ GL AILDGCP LE LD+ +
Sbjct: 224 YDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRK 283

Query: 271 CFNLSFKGPLKQKCAERIKTLHLPHDPTGYGFITEIIDYP 289
           CF +S  G L+++C E IK L  P D T         DYP
Sbjct: 284 CFRISLVGNLEKRCLEMIKELRRPGDSTA--------DYP 300

The following BLAST results are available for this feature:

BLAST of Sed0015091 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883506.1	4.9e-85	61.48	F-box protein SKIP19-like [Benincasa hispida]	[more]
XP_022146630.1	1.3e-80	59.38	F-box protein SKIP19-like [Momordica charantia]	[more]
XP_022146724.1	1.3e-77	60.94	putative F-box/LRR-repeat protein 23 [Momordica charantia]	[more]
KAG7034751.1	1.7e-77	60.67	Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subs...	[more]
XP_022925897.1	2.2e-77	60.67	F-box protein SKIP19-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0015091 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9V9	2.7e-62	45.52	Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE...	[more]
Q9M0U9	3.0e-61	51.03	F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1	[more]
Q9M0U7	1.4e-50	41.72	Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE...	[more]
Q9M0U6	3.5e-49	42.50	Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE...	[more]
Q9S9V8	2.2e-48	44.59	Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4...	[more]

BLAST of Sed0015091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXS5	6.1e-81	59.38	F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV...	[more]
A0A6J1CYW9	6.3e-78	60.94	putative F-box/LRR-repeat protein 23 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1EGI8	1.1e-77	60.67	F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]
A0A6J1ECV6	1.1e-77	60.67	F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]
A0A6J1ILH5	3.1e-77	60.30	F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1	[more]

BLAST of Sed0015091 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05460.1	2.1e-62	51.03	RNI-like superfamily protein	[more]
AT4G05475.1	1.0e-51	41.72	RNI-like superfamily protein	[more]
AT4G05490.1	2.5e-50	42.50	RNI-like superfamily protein	[more]
AT4G05497.1	1.6e-49	44.59	RNI-like superfamily protein	[more]
AT4G05470.1	2.1e-46	39.64	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 129..154 e-value: 2.9 score: 16.9 coord: 211..235 e-value: 0.21 score: 20.6
None	No IPR available	GENE3D	1.20.1280.50		coord: 26..78 e-value: 1.1E-12 score: 49.6
None	No IPR available	PANTHER	PTHR38926:SF2	F-BOX/LRR-REPEAT PROTEIN 21-RELATED	coord: 27..270
None	No IPR available	PANTHER	PTHR38926	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 27..270
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 125..254
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 33..77 e-value: 2.1E-10 score: 40.3
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 30..77 score: 11.537539
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 128..148 e-value: 0.002 score: 18.0 coord: 212..232 e-value: 0.64 score: 10.3
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 82..267 e-value: 3.8E-24 score: 86.8
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 24..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015091.2	Sed0015091.2	mRNA
Sed0015091.1	Sed0015091.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding