Sed0015087 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAACGATCACAAGGCCAAATTACCTAAGCCTCCGACGAGGTTACAGAAGCGAGCGCCGGCGGGTCTTCACCTCGATCAAATCTCAAGCGTCTCGATGTTTTCCGGTGGTTCCGATCCTTCTCCCAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTTGTCGCCGTTACCTTTACCTGAAACTGAGGGGGATGGAGCATCGGCGAACGGAAACGCCGCGGGCGGCGGCGGCGGCGACGAAAGAGGTGTAGGGTTTTTCACTCCTGGTGTCTGGCAACATCCGGCGGTGGCAACGACATTCGCGGATCCTTCAACTCTGTTCACTTTTTTTCAATCGCAGTGCGTTGTAAGCAGTAACACGCCATGA ATGGAGAACGATCACAAGGCCAAATTACCTAAGCCTCCGACGAGGTTACAGAAGCGAGCGCCGGCGGGTCTTCACCTCGATCAAATCTCAAGCGTCTCGATGTTTTCCGGTGGTTCCGATCCTTCTCCCAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTTGTCGCCGTTACCTTTACCTGAAACTGAGGGGGATGGAGCATCGGCGAACGGAAACGCCGCGGGCGGCGGCGGCGGCGACGAAAGAGGTGTAGGGTTTTTCACTCCTGGTGTCTGGCAACATCCGGCGGTGGCAACGACATTCGCGGATCCTTCAACTCTGTTCACTTTTTTTCAATCGCAGTGCGTTGTAAGCAGTAACACGCCATGA ATGGAGAACGATCACAAGGCCAAATTACCTAAGCCTCCGACGAGGTTACAGAAGCGAGCGCCGGCGGGTCTTCACCTCGATCAAATCTCAAGCGTCTCGATGTTTTCCGGTGGTTCCGATCCTTCTCCCAAGGCGATTCTTCCTCTGCTATCGCCGCTCCCTTTGTCGCCGTTACCTTTACCTGAAACTGAGGGGGATGGAGCATCGGCGAACGGAAACGCCGCGGGCGGCGGCGGCGGCGACGAAAGAGGTGTAGGGTTTTTCACTCCTGGTGTCTGGCAACATCCGGCGGTGGCAACGACATTCGCGGATCCTTCAACTCTGTTCACTTTTTTTCAATCGCAGTGCGTTGTAAGCAGTAACACGCCATGA MENDHKAKLPKPPTRLQKRAPAGLHLDQISSVSMFSGGSDPSPKAILPLLSPLPLSPLPLPETEGDGASANGNAAGGGGGDERGVGFFTPGVWQHPAVATTFADPSTLFTFFQSQCVVSSNTP Homology
BLAST of Sed0015087 vs. NCBI nr
Match: XP_038902307.1 (uncharacterized protein LOC120088941 [Benincasa hispida]) HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44 Identity = 96/125 (76.80%), Postives = 107/125 (85.60%), Query Frame = 0
BLAST of Sed0015087 vs. NCBI nr
Match: XP_011657141.1 (uncharacterized protein LOC105435808 [Cucumis sativus] >XP_031742438.1 uncharacterized protein LOC116404357 [Cucumis sativus] >KAE8645882.1 hypothetical protein Csa_017707 [Cucumis sativus]) HSP 1 Score: 181.8 bits (460), Expect = 3.6e-42 Identity = 93/125 (74.40%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of Sed0015087 vs. NCBI nr
Match: KAG6605440.1 (hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035388.1 hypothetical protein SDJN02_02184, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 180.6 bits (457), Expect = 8.0e-42 Identity = 90/123 (73.17%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of Sed0015087 vs. NCBI nr
Match: KAA0061869.1 (uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa] >TYK15387.1 uncharacterized protein E5676_scaffold571G00270 [Cucumis melo var. makuwa]) HSP 1 Score: 178.7 bits (452), Expect = 3.0e-41 Identity = 92/125 (73.60%), Postives = 102/125 (81.60%), Query Frame = 0
BLAST of Sed0015087 vs. NCBI nr
Match: KAG6570684.1 (hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010531.1 hypothetical protein SDJN02_27325, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.5 bits (410), Expect = 2.2e-36 Identity = 81/124 (65.32%), Postives = 100/124 (80.65%), Query Frame = 0
BLAST of Sed0015087 vs. ExPASy TrEMBL
Match: A0A0A0KBQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188670 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.7e-42 Identity = 93/125 (74.40%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of Sed0015087 vs. ExPASy TrEMBL
Match: A0A5A7V856 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00270 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41 Identity = 92/125 (73.60%), Postives = 102/125 (81.60%), Query Frame = 0
BLAST of Sed0015087 vs. ExPASy TrEMBL
Match: A0A6J1D5B7 (uncharacterized protein LOC111017071 OS=Momordica charantia OX=3673 GN=LOC111017071 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18 Identity = 59/90 (65.56%), Postives = 69/90 (76.67%), Query Frame = 0
BLAST of Sed0015087 vs. ExPASy TrEMBL
Match: A0A6P3ZH11 (uncharacterized protein LOC107411018 OS=Ziziphus jujuba OX=326968 GN=LOC107411018 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.2e-13 Identity = 60/117 (51.28%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Sed0015087 vs. ExPASy TrEMBL
Match: A0A2I4HGI9 (uncharacterized protein LOC109017360 OS=Juglans regia OX=51240 GN=LOC109017360 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.2e-13 Identity = 55/113 (48.67%), Postives = 68/113 (60.18%), Query Frame = 0
BLAST of Sed0015087 vs. TAIR 10
Match: AT1G07473.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07476.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 8.3e-05 Identity = 25/62 (40.32%), Postives = 33/62 (53.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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