Sed0014952 (gene) Chayote v1

Overview
NameSed0014952
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG12: 5916428 .. 5918229 (-)
RNA-Seq ExpressionSed0014952
SyntenySed0014952
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCTCTCGACAGCTGAACCGTCTCGTCTTCACTGAGCACAAAAAACACACATATATTCATTTCTTCTGTAACCCTAGAAATTCAAAAATGGCATCCCAATCCAAAATTCGCACAATTTTTTCCTTCCGGAACTCGATTCGCATCTGTTCCTCACCCAAATCTCTCTGCACAGTGAGCGAATCGACCCAAATCGCCGAGTCCCCGGAGCTTCCAGACTGGGTAAAGTTCTTCGACACCAAAACCTCTTCAAATGCCGACGACGATATCTTCGTCATTCCTCCATTGGCGCATTGGCTCCAAGATCACCGCAAACCCGTCGAGAAGAAGCTCGGCGAGGCGGGCGATGCCGAAGTCGACAAAATAAGTTTGATTCTAAAGAATCGGCACCCATCACCGGGAGATGTTGTGGAAGCTTTGAATGGAAGGGGTTACGTTGTATCGAACACCTTGGTTGCACAGATTCTGAAGAGATTTGGGAATGATTGGATCCCAGCTTATGGTTTTTTCATGTGGGCAAAACATCAAACACCTTATGGGCATTCAGCTGAATTGTATAACTCTATGGTTGAGATCTTGGGGAGAGCCAAACAGTTTAGATACATGTGGGAATTGGTTGATGAGATGTGTAATTTATCTGGGTTTGTGAGTTTGGAGACGATGACTAGGGTTATTAGGAGGTTAGCGAGGGCTGGTATGTATAAGGAGGCAATTGAGGCTTTTAAAGGGATGGGGAAATATGGGGTTTGTAAAGATACAGCAGCCATGAATGTTTTGATGGATGCTTTAGTTAAAGAGTGCAGTGTTGAAGATGCACACAAAGTGTTTGATGAAATGAAGGGTTCAATACCTTTTAATTTGACTTCTTTTAATGTTCTTATACATGGGTACTGCAAAGCCAGGAAGCTCGATGAGGCGTTGAAGATCATGGAAGAAGTTGAGAATTATGGACTAGAGCCTGATGTGATATCCTTCACTGCTTTCATCGAAGCTCATTGCCGCGACAAAAACTTTCGAGCCGTGGATGAGATTCTGGTGCAAATGGAACAAAAGGGGTGTAGGCCTAATGTTGTAACTTTCACCATTATCATGCATGCTTTAGGGAAGGCTAAACAGATAAATGAAGCTCTGAGCATGTACGAGAAGATGAAGAAAGTGGGTTGTGTTCCTGATAGTTCATTTTACAGCTCTCTGATTTTCATTCTTGGTAAAGCTGGTAGGCTCAAAGATGTTGAGGAGATAGCAGAGGACATGGCAAAGCAGGGAGTTAATCCAGATGTGTTGACATATAGCACGATGATATCTTGTGTTTGTTCGCATTCGCAGGAGGAGGCAGCGCTAAGATTGCTACGTAAAATGGAGGAGGTTTCGTGCAAGCCGGACCTCAAGACTTACCACCCTTTGTTGAAGATGTTCTGTAAAAAGAAGAGAATGAAGGTGCTTAAGTTTTTGTTGGATCACATGTTCAAGAATGATGTAAGTATTGACGCTGGGACTTACTCGCTTCTGGTACGCGGGCTGTGTGAGAACGGGAATCTCCATCTTGCGTGCTCGTTCCTCGGGGAAATGGTGTCGAAGGGGATGGTTCCTAAAGACTCCACATTCAAGATGTTGAAGGAAGAACTTGAGAGGAAAAGTATGGTAGAAGAAATGAAAATCATTGAGAAGTTGATGTCCTGTGCAACGGAGCAAGATCAAGGCTAAAGAATCACATTTGAACTGCCTGTTTATTTGAACAATATTTTCAAAATTGGGGCTGTTGTAGAAACTTGATTGTTTATATATGGAGAGAACTAATTCAACC

mRNA sequence

GCTCTCTCGACAGCTGAACCGTCTCGTCTTCACTGAGCACAAAAAACACACATATATTCATTTCTTCTGTAACCCTAGAAATTCAAAAATGGCATCCCAATCCAAAATTCGCACAATTTTTTCCTTCCGGAACTCGATTCGCATCTGTTCCTCACCCAAATCTCTCTGCACAGTGAGCGAATCGACCCAAATCGCCGAGTCCCCGGAGCTTCCAGACTGGGTAAAGTTCTTCGACACCAAAACCTCTTCAAATGCCGACGACGATATCTTCGTCATTCCTCCATTGGCGCATTGGCTCCAAGATCACCGCAAACCCGTCGAGAAGAAGCTCGGCGAGGCGGGCGATGCCGAAGTCGACAAAATAAGTTTGATTCTAAAGAATCGGCACCCATCACCGGGAGATGTTGTGGAAGCTTTGAATGGAAGGGGTTACGTTGTATCGAACACCTTGGTTGCACAGATTCTGAAGAGATTTGGGAATGATTGGATCCCAGCTTATGGTTTTTTCATGTGGGCAAAACATCAAACACCTTATGGGCATTCAGCTGAATTGTATAACTCTATGGTTGAGATCTTGGGGAGAGCCAAACAGTTTAGATACATGTGGGAATTGGTTGATGAGATGTGTAATTTATCTGGGTTTGTGAGTTTGGAGACGATGACTAGGGTTATTAGGAGGTTAGCGAGGGCTGGTATGTATAAGGAGGCAATTGAGGCTTTTAAAGGGATGGGGAAATATGGGGTTTGTAAAGATACAGCAGCCATGAATGTTTTGATGGATGCTTTAGTTAAAGAGTGCAGTGTTGAAGATGCACACAAAGTGTTTGATGAAATGAAGGGTTCAATACCTTTTAATTTGACTTCTTTTAATGTTCTTATACATGGGTACTGCAAAGCCAGGAAGCTCGATGAGGCGTTGAAGATCATGGAAGAAGTTGAGAATTATGGACTAGAGCCTGATGTGATATCCTTCACTGCTTTCATCGAAGCTCATTGCCGCGACAAAAACTTTCGAGCCGTGGATGAGATTCTGGTGCAAATGGAACAAAAGGGGTGTAGGCCTAATGTTGTAACTTTCACCATTATCATGCATGCTTTAGGGAAGGCTAAACAGATAAATGAAGCTCTGAGCATGTACGAGAAGATGAAGAAAGTGGGTTGTGTTCCTGATAGTTCATTTTACAGCTCTCTGATTTTCATTCTTGGTAAAGCTGGTAGGCTCAAAGATGTTGAGGAGATAGCAGAGGACATGGCAAAGCAGGGAGTTAATCCAGATGTGTTGACATATAGCACGATGATATCTTGTGTTTGTTCGCATTCGCAGGAGGAGGCAGCGCTAAGATTGCTACGTAAAATGGAGGAGGTTTCGTGCAAGCCGGACCTCAAGACTTACCACCCTTTGTTGAAGATGTTCTGTAAAAAGAAGAGAATGAAGGTGCTTAAGTTTTTGTTGGATCACATGTTCAAGAATGATGTAAGTATTGACGCTGGGACTTACTCGCTTCTGGTACGCGGGCTGTGTGAGAACGGGAATCTCCATCTTGCGTGCTCGTTCCTCGGGGAAATGGTGTCGAAGGGGATGGTTCCTAAAGACTCCACATTCAAGATGTTGAAGGAAGAACTTGAGAGGAAAAGTATGGTAGAAGAAATGAAAATCATTGAGAAGTTGATGTCCTGTGCAACGGAGCAAGATCAAGGCTAAAGAATCACATTTGAACTGCCTGTTTATTTGAACAATATTTTCAAAATTGGGGCTGTTGTAGAAACTTGATTGTTTATATATGGAGAGAACTAATTCAACC

Coding sequence (CDS)

ATGGCATCCCAATCCAAAATTCGCACAATTTTTTCCTTCCGGAACTCGATTCGCATCTGTTCCTCACCCAAATCTCTCTGCACAGTGAGCGAATCGACCCAAATCGCCGAGTCCCCGGAGCTTCCAGACTGGGTAAAGTTCTTCGACACCAAAACCTCTTCAAATGCCGACGACGATATCTTCGTCATTCCTCCATTGGCGCATTGGCTCCAAGATCACCGCAAACCCGTCGAGAAGAAGCTCGGCGAGGCGGGCGATGCCGAAGTCGACAAAATAAGTTTGATTCTAAAGAATCGGCACCCATCACCGGGAGATGTTGTGGAAGCTTTGAATGGAAGGGGTTACGTTGTATCGAACACCTTGGTTGCACAGATTCTGAAGAGATTTGGGAATGATTGGATCCCAGCTTATGGTTTTTTCATGTGGGCAAAACATCAAACACCTTATGGGCATTCAGCTGAATTGTATAACTCTATGGTTGAGATCTTGGGGAGAGCCAAACAGTTTAGATACATGTGGGAATTGGTTGATGAGATGTGTAATTTATCTGGGTTTGTGAGTTTGGAGACGATGACTAGGGTTATTAGGAGGTTAGCGAGGGCTGGTATGTATAAGGAGGCAATTGAGGCTTTTAAAGGGATGGGGAAATATGGGGTTTGTAAAGATACAGCAGCCATGAATGTTTTGATGGATGCTTTAGTTAAAGAGTGCAGTGTTGAAGATGCACACAAAGTGTTTGATGAAATGAAGGGTTCAATACCTTTTAATTTGACTTCTTTTAATGTTCTTATACATGGGTACTGCAAAGCCAGGAAGCTCGATGAGGCGTTGAAGATCATGGAAGAAGTTGAGAATTATGGACTAGAGCCTGATGTGATATCCTTCACTGCTTTCATCGAAGCTCATTGCCGCGACAAAAACTTTCGAGCCGTGGATGAGATTCTGGTGCAAATGGAACAAAAGGGGTGTAGGCCTAATGTTGTAACTTTCACCATTATCATGCATGCTTTAGGGAAGGCTAAACAGATAAATGAAGCTCTGAGCATGTACGAGAAGATGAAGAAAGTGGGTTGTGTTCCTGATAGTTCATTTTACAGCTCTCTGATTTTCATTCTTGGTAAAGCTGGTAGGCTCAAAGATGTTGAGGAGATAGCAGAGGACATGGCAAAGCAGGGAGTTAATCCAGATGTGTTGACATATAGCACGATGATATCTTGTGTTTGTTCGCATTCGCAGGAGGAGGCAGCGCTAAGATTGCTACGTAAAATGGAGGAGGTTTCGTGCAAGCCGGACCTCAAGACTTACCACCCTTTGTTGAAGATGTTCTGTAAAAAGAAGAGAATGAAGGTGCTTAAGTTTTTGTTGGATCACATGTTCAAGAATGATGTAAGTATTGACGCTGGGACTTACTCGCTTCTGGTACGCGGGCTGTGTGAGAACGGGAATCTCCATCTTGCGTGCTCGTTCCTCGGGGAAATGGTGTCGAAGGGGATGGTTCCTAAAGACTCCACATTCAAGATGTTGAAGGAAGAACTTGAGAGGAAAAGTATGGTAGAAGAAATGAAAATCATTGAGAAGTTGATGTCCTGTGCAACGGAGCAAGATCAAGGCTAA

Protein sequence

MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTKTSSNADDDIFVIPPLAHWLQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGRGYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMWELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDALVKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVISFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKMKKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQEEAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLLVRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATEQDQG
Homology
[Close]
BLAST of Sed0014952 vs. NCBI nr
Match: XP_023527160.1 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 872.5 bits (2253), Expect = 1.9e-249
Identity = 437/542 (80.63%), Postives = 478/542 (88.19%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTKTSSNAD--D 60
           MASQ + R IFS RNSIR C S K LCT+S STQ +ESPELPDWVKFFDT++SS++D  D
Sbjct: 1   MASQLQTRIIFSLRNSIRSCYSAKPLCTISGSTQDSESPELPDWVKFFDTRSSSHSDSED 60

Query: 61  DIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGR 120
           D+FVIPPLAHW     L+DH K  +KKLGEA D EVDKISL+LKNR+PSP +V E LNGR
Sbjct: 61  DVFVIPPLAHWLESQRLEDHSKVGKKKLGEANDNEVDKISLMLKNRYPSPENVAETLNGR 120

Query: 121 GYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMW 180
            Y VSNTLVAQ+LKRFGNDWIPAYG F WAK QTPY HS E YNSMV+ILGRAK+FR MW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDAL 240
           ELVDEM +++ +VSLETM++VIRRLARAG Y+EAIEAF+ + +YGV KDTAAMNVLMDAL
Sbjct: 181 ELVDEMSHIAAYVSLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVI 300
           VKE SVEDAH VF+E+KGSIPFNLTSFNVLIHGYCKARKLDEA KIMEEVE  GLEPDVI
Sbjct: 241 VKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEVEKQGLEPDVI 300

Query: 301 SFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKM 360
           S+TAFIEAHCRDK+FR VD+ILV MEQKGCRPN VTFTIIM  LGKAKQINEAL +YEKM
Sbjct: 301 SYTAFIEAHCRDKDFRKVDKILVLMEQKGCRPNAVTFTIIMQTLGKAKQINEALKIYEKM 360

Query: 361 KKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQE 420
           KK GCVPDSSFYSSLIFILGKAG+LKDV+EI EDM  QGVNPDVLTY+TMISC C+HSQE
Sbjct: 361 KKEGCVPDSSFYSSLIFILGKAGKLKDVKEIVEDMTNQGVNPDVLTYNTMISCACAHSQE 420

Query: 421 EAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 480
           E ALRLLRKMEE SCKPDLKTYHPLLKMFC KKRMKVLKFLLDHMFKNDVSI+AGTYS+L
Sbjct: 421 ETALRLLRKMEEDSCKPDLKTYHPLLKMFCNKKRMKVLKFLLDHMFKNDVSIEAGTYSIL 480

Query: 481 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATE 536
           VRG+C+ GN+HLACSF GEMVSKGMVPKDSTFKMLKEELERK M EEMKIIEKLM CATE
Sbjct: 481 VRGMCDTGNIHLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEEMKIIEKLMLCATE 540

[Close]
BLAST of Sed0014952 vs. NCBI nr
Match: XP_022137945.1 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Momordica charantia])

HSP 1 Score: 872.1 bits (2252), Expect = 2.5e-249
Identity = 438/545 (80.37%), Postives = 482/545 (88.44%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQI--AESPELPDWVKFFDTKTSS--NA 60
           MASQS+IR IF FR SIR CSS KSLCT+S STQ   +ESPELPDW KFFD+K SS  +A
Sbjct: 1   MASQSQIRIIFHFRKSIRTCSSAKSLCTISGSTQASDSESPELPDWFKFFDSKNSSHTDA 60

Query: 61  DDDIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALN 120
           DDD+FVIPPLAHW     L+ H   V+K L +A D EVDK+S++LKNR+PSP +V EALN
Sbjct: 61  DDDVFVIPPLAHWLDSQRLEAHSNVVKKTLNQASDNEVDKVSMMLKNRYPSPENVAEALN 120

Query: 121 GRGYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRY 180
           G  Y VSNTLVAQ+LKRFGNDWIPAYG F WAK QTPY HS E YNSMV+ILGRAK+F  
Sbjct: 121 GSAYRVSNTLVAQLLKRFGNDWIPAYGIFKWAKEQTPYRHSRESYNSMVDILGRAKRFGL 180

Query: 181 MWELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMD 240
           MWELVDEM  LSG+VSLETM++VIRRLARAG Y+EAIEAF+ M KYGV KDTAAMNVLMD
Sbjct: 181 MWELVDEMSRLSGYVSLETMSKVIRRLARAGRYQEAIEAFRRMEKYGVGKDTAAMNVLMD 240

Query: 241 ALVKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPD 300
           ALVKE SVEDAH VF+E+KGSIPFNLTSFNVLIHGYCKARKLDEA KIM+EVE +GLEPD
Sbjct: 241 ALVKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMDEVEKHGLEPD 300

Query: 301 VISFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYE 360
           VIS+TAFIEAHCRDK+FR V++ILVQMEQKGCRPN VTFTIIMHALGKAKQ+NEAL +YE
Sbjct: 301 VISYTAFIEAHCRDKDFRKVNKILVQMEQKGCRPNAVTFTIIMHALGKAKQLNEALKIYE 360

Query: 361 KMKKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHS 420
           KMKK GCVPDSSFYSSLIFILGKAGRLKDV+EI EDM KQGVNPDVLTY+T+ISC C+HS
Sbjct: 361 KMKKEGCVPDSSFYSSLIFILGKAGRLKDVKEIVEDMTKQGVNPDVLTYNTIISCACAHS 420

Query: 421 QEEAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYS 480
           QEE ALRLL+KME  SCKPDLKTYHPLLKMFCKKKRMKVLK LLDHMFKNDVSI+AGTYS
Sbjct: 421 QEETALRLLQKMEADSCKPDLKTYHPLLKMFCKKKRMKVLKLLLDHMFKNDVSIEAGTYS 480

Query: 481 LLVRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCA 537
           +LVRGLC+NG LHLACSF GEMVSKGM+PKDSTFKMLKEELERKSM+EE+KI+EKLMS A
Sbjct: 481 ILVRGLCDNGKLHLACSFFGEMVSKGMIPKDSTFKMLKEELERKSMLEEIKIVEKLMSYA 540

[Close]
BLAST of Sed0014952 vs. NCBI nr
Match: XP_022955800.1 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita moschata])

HSP 1 Score: 867.1 bits (2239), Expect = 8.1e-248
Identity = 433/542 (79.89%), Postives = 476/542 (87.82%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTKTSSNAD--D 60
           MASQ + R IFS RNSIR C S K LCT+S STQ +ESPELPDWVKFFDT++SS++D  D
Sbjct: 1   MASQLQTRIIFSLRNSIRSCYSAKPLCTISGSTQDSESPELPDWVKFFDTRSSSHSDSED 60

Query: 61  DIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGR 120
           D+FVIPPLAHW     L+DH +  +KKLGEA D EVDKIS++LKNR+PSP +V E LNGR
Sbjct: 61  DVFVIPPLAHWLESQRLEDHSEVGKKKLGEANDNEVDKISMMLKNRYPSPENVAETLNGR 120

Query: 121 GYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMW 180
            Y VSNTLVAQ+LKRFGNDWIPAYG F WAK QTPY HS E YNSMV+ILGRAK+FR MW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDAL 240
           ELVDEM +++ +VSLETM++VIRRLARAG Y+EAIEAF+ + +YGV KDTAAMNVLMDAL
Sbjct: 181 ELVDEMSHIAAYVSLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVI 300
           VKE SVEDAH VF+E+KGSIPFNLTSFNVLIHGYCKARKLDEA KIMEE+E  GLEPDVI
Sbjct: 241 VKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEIERQGLEPDVI 300

Query: 301 SFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKM 360
           S+TAFIEAHCRDK+FR VD+ILV MEQKGCRPN VTFTIIM  LGKAKQINEAL +YEKM
Sbjct: 301 SYTAFIEAHCRDKDFRKVDKILVLMEQKGCRPNAVTFTIIMQTLGKAKQINEALKIYEKM 360

Query: 361 KKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQE 420
           KK GCVPDSSFYSSLIFILGKAGRLKDV+EI EDM  QGVNPDVLTY+TMISC C+HSQE
Sbjct: 361 KKEGCVPDSSFYSSLIFILGKAGRLKDVKEIVEDMTNQGVNPDVLTYNTMISCACAHSQE 420

Query: 421 EAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 480
           E ALRLLRKMEE SCKPDLKTYHPLLKMFC KKRMKVLKFLLDHMFKND SI+AGTYS+L
Sbjct: 421 ETALRLLRKMEEDSCKPDLKTYHPLLKMFCNKKRMKVLKFLLDHMFKNDASIEAGTYSIL 480

Query: 481 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATE 536
           VRG+C+ G +HLACSF GEMVSKGMVPKDSTFKMLKEELERK M EEMKIIEKLM CATE
Sbjct: 481 VRGMCDTGKIHLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEEMKIIEKLMLCATE 540

[Close]
BLAST of Sed0014952 vs. NCBI nr
Match: XP_022979545.1 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita maxima])

HSP 1 Score: 865.5 bits (2235), Expect = 2.4e-247
Identity = 434/542 (80.07%), Postives = 473/542 (87.27%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTKTSSNAD--D 60
           MASQ + R IFS RNSIR C S    CT+S STQ +ESPELPDWVKFFDT +SS +D  D
Sbjct: 1   MASQLQTRIIFSLRNSIRTCYSANPFCTISGSTQDSESPELPDWVKFFDTGSSSRSDSED 60

Query: 61  DIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGR 120
           D+FVIPPLAHW     L+DH K  +KKLGEA D E+DKIS++LKNR+PSP +V E LNGR
Sbjct: 61  DVFVIPPLAHWVESQRLEDHSKVGKKKLGEANDNEIDKISMMLKNRYPSPENVAETLNGR 120

Query: 121 GYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMW 180
            Y VSNTLVAQ+LKRFGNDWIPAYG F WAK QTPY HS E YNSMV+ILGRAK+FR MW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDAL 240
           ELVDEM +L+ +VSLETM++VIRRLARAG Y+EAIEAF+ + +YGV KDTAAMNVLMDAL
Sbjct: 181 ELVDEMSHLAAYVSLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVI 300
           VKE SVEDAH VF+E+KGSIPFNLTSFNVLIHGYCKARKLDEA KIMEEVE  GLEPDVI
Sbjct: 241 VKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEVERQGLEPDVI 300

Query: 301 SFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKM 360
           S+TAFIEAHCRDK+FR VD+ILV MEQKGCRPN VTFTIIM  LGKAKQINEAL +YEKM
Sbjct: 301 SYTAFIEAHCRDKDFRKVDKILVLMEQKGCRPNAVTFTIIMQTLGKAKQINEALKIYEKM 360

Query: 361 KKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQE 420
           KK GCVPDSSFYSSLIFILGKAGRLKDV+EI EDM  QGVNPDVLTY+TMISC C+HSQE
Sbjct: 361 KKEGCVPDSSFYSSLIFILGKAGRLKDVKEIVEDMTNQGVNPDVLTYNTMISCACAHSQE 420

Query: 421 EAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 480
           E ALRLLRKMEE SCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSI+AGTYS+L
Sbjct: 421 ETALRLLRKMEEDSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIEAGTYSIL 480

Query: 481 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATE 536
           VRG+C+ G +HLACSF GEMVSKGMVPKDSTFKMLKEELERK M EE KIIEKLM CATE
Sbjct: 481 VRGMCDTGKIHLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEETKIIEKLMLCATE 540

[Close]
BLAST of Sed0014952 vs. NCBI nr
Match: KAG7018726.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 865.5 bits (2235), Expect = 2.4e-247
Identity = 433/542 (79.89%), Postives = 475/542 (87.64%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTKTSSNAD--D 60
           MASQ + R IFS RNS+R C S K LCT+S STQ +ESPELPDWVKFFDT++SS++D  D
Sbjct: 1   MASQLQTRIIFSLRNSVRTCYSAKPLCTISGSTQDSESPELPDWVKFFDTRSSSHSDSED 60

Query: 61  DIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGR 120
           D+FVIPPLAHW     L+DH K  +KKLGEA D EVDKIS++LKNR+ SP +V E LNGR
Sbjct: 61  DVFVIPPLAHWLESQRLEDHSKVGKKKLGEANDNEVDKISMMLKNRYSSPENVAETLNGR 120

Query: 121 GYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMW 180
            Y VSNTLVAQ+LKRFGNDWIPAYG F WAK QTPY HS E YNSMV+ILGRAK+FR MW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDAL 240
           ELVDEM +L+ + SLETM++VIRRLARAG Y+EAIEAF+ + +YGV KDTAAMNVLMDAL
Sbjct: 181 ELVDEMSHLAAYASLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVI 300
           VKE SVEDAHKVF+E+KGSIPFNLTSFNVLIHGYCKARKLDEA KIMEEVE  GLEPDVI
Sbjct: 241 VKEGSVEDAHKVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEVERQGLEPDVI 300

Query: 301 SFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKM 360
           S+TAFIEAHCRDK+FR VD+ILV MEQKGCRPN VTFTIIM  LGKAKQINEAL +YEKM
Sbjct: 301 SYTAFIEAHCRDKDFRKVDKILVLMEQKGCRPNAVTFTIIMQTLGKAKQINEALKIYEKM 360

Query: 361 KKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQE 420
           KK GCVPDSSFYSSLIFILGKAGRLKDV+E+ EDM  QGVNPDVLTY+TMISC C+H QE
Sbjct: 361 KKEGCVPDSSFYSSLIFILGKAGRLKDVKEVVEDMTNQGVNPDVLTYNTMISCACAHLQE 420

Query: 421 EAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 480
           E ALRLLRKMEE SCKPDLKTYHPLLKMFC KKRMKVLKFLLDHMFKNDVSI+AGTYS+L
Sbjct: 421 ETALRLLRKMEEDSCKPDLKTYHPLLKMFCNKKRMKVLKFLLDHMFKNDVSIEAGTYSIL 480

Query: 481 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATE 536
           VRG+C+ G +HLACSF GEMVSKGMVPKDSTFKMLKEELERK M EEMKIIEKLM CATE
Sbjct: 481 VRGMCDTGKVHLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEEMKIIEKLMLCATE 540

[Close]
BLAST of Sed0014952 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.1e-141
Identity = 268/525 (51.05%), Postives = 362/525 (68.95%), Query Frame = 0 

Query: 28  TVSESTQI-AESPELPDWVK-FFDTKTSSNA-----DDDIFVIPPLAHWLQDHR----KP 87
           T  ES  + AESPELP W+K F   K SS++     DD+ FVIP LA+W++  +    + 
Sbjct: 30  TAEESPIVAAESPELPSWIKDFLSNKPSSSSSSVSKDDEDFVIPSLANWVESQKFSRQQV 89

Query: 88  VEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGRGYVVSNTLVAQILKRFGNDWIPA 147
            E  + +    ++DK+   L  +  S  DVV+ L+    VV+ +LV Q+L+RF N W  A
Sbjct: 90  SEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQA 149

Query: 148 YGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMWELVDEM--CNLSGFVSLETMTRV 207
           YGFF+WA  QT Y HS   YN+MV++LG+ + F  MWELV+EM     S  V+L+TM++V
Sbjct: 150 YGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKV 209

Query: 208 IRRLARAGMYKEAIEAFKGMGK-YGVCKDTAAMNVLMDALVKECSVEDAHKVFDEMKGSI 267
           +RRLA++G Y +A++AF  M K YGV  DT AMN LMDALVKE S+E AH+VF ++  +I
Sbjct: 210 MRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTI 269

Query: 268 PFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVISFTAFIEAHCRDKNFRAVDE 327
             +  +FN+LIHG+CKARK D+A  +M+ ++     PDV+++T+F+EA+C++ +FR V+E
Sbjct: 270 KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE 329

Query: 328 ILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKMKKVGCVPDSSFYSSLIFILG 387
           +L +M + GC PNVVT+TI+MH+LGK+KQ+ EAL +YEKMK+ GCVPD+ FYSSLI IL 
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389

Query: 388 KAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQEEAALRLLRKMEE---VSCKP 447
           K GR KD  EI EDM  QGV  DVL Y+TMIS    HS++E ALRLL++ME+    SC P
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSP 449

Query: 448 DLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLLVRGLCENGNLHLACSFL 507
           +++TY PLLKM C KK+MK+L  LL HM KNDVSID  TY LL+RGLC +G +  AC F 
Sbjct: 450 NVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFF 509

Query: 508 GEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATEQD 536
            E V KGMVP+DST KML +ELE+K+M E    I+ L+   T  D
Sbjct: 510 EEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSKTMID 554

[Close]
BLAST of Sed0014952 vs. ExPASy Swiss-Prot
Match: Q9M8W9 (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 3.7e-78
Identity = 159/415 (38.31%), Postives = 257/415 (61.93%), Query Frame = 0 

Query: 117 VSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMWELV 176
           +S+ LV ++L RF +DW  A G   WA+    + HS++ Y+  V+ILG+AK++  M E V
Sbjct: 85  LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV 144

Query: 177 DEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDALVKE 236
           + M      V+L T+ +++RR A AG ++EA+  F  +G++G+ K+T +MN+L+D L KE
Sbjct: 145 ERMRG-DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKE 204

Query: 237 CSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVISFT 296
             VE A  V  ++K  I  N  +FN+ IHG+CKA +++EAL  ++E++ +G  P VIS+T
Sbjct: 205 KRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 264

Query: 297 AFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKMKKV 356
             I  +C+   F  V E+L +ME  G  PN +T+T IM +L   K+  EAL +  +MK+ 
Sbjct: 265 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 324

Query: 357 GCVPDSSFYSSLIFILGKAGRLKDVEEIAE-DMAKQGVNPDVLTYSTMISCVCSHSQEEA 416
           GC PDS FY+ LI  L +AGRL++ E +   +M + GV+ +  TY++MI+  C H +E+ 
Sbjct: 325 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 384

Query: 417 ALRLLRKMEEVS-CKPDLKTYHPLLK-MFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 476
           A+ LL++ME  + C PD+ TY PLL+  F +   ++V K L + + K+ +S+D  TY+ L
Sbjct: 385 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 444

Query: 477 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLM 529
           ++ LC       A     EM+S+ + P+  T  +L EE+++K+M E  + IE +M
Sbjct: 445 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498

[Close]
BLAST of Sed0014952 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 8.9e-64
Identity = 148/449 (32.96%), Postives = 239/449 (53.23%), Query Frame = 0 

Query: 88  EVDKISLILKNRHPSPGDVVEALNGRGYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQT 147
           EV+KI  IL+N H     +  ALN  G  +   L+ ++L R G+     Y FF+WA  Q 
Sbjct: 66  EVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQP 125

Query: 148 PYGHSAELYNSMVEILGRAKQFRYMWELVDEMCNLS-GFVSLETMTRVIRRLARAGMYKE 207
            Y HS E+  SMV IL + +QF  +W L++EM   +   +  E    ++RR A A M K+
Sbjct: 126 GYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKK 185

Query: 208 AIEAFKGMGKYGVCKDTAAMNVLMDALVKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHG 267
           A+E    M KYG+  D      L+DAL K  SV++A KVF++M+   P NL  F  L++G
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYG 245

Query: 268 YCKARKLDEALKIMEEVENYGLEPDVISFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPN 327
           +C+  KL EA +++ +++  GLEPD++ FT  +  +          +++  M ++G  PN
Sbjct: 246 WCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPN 305

Query: 328 VVTFTIIMHALGKA-KQINEALSMYEKMKKVGCVPDSSFYSSLIFILGKAGRLKDVEEIA 387
           V  +T+++ AL +  K+++EA+ ++ +M++ GC  D   Y++LI    K G +     + 
Sbjct: 306 VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVL 365

Query: 388 EDMAKQGVNPDVLTYSTMISCVCSHSQEEAALRLLRKMEEVSCKPDLKTYHPLLKMFCKK 447
           +DM K+GV P  +TY  ++       Q E  L L+ KM+   C PDL  Y+ ++++ CK 
Sbjct: 366 DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL 425

Query: 448 KRMKVLKFLLDHMFKNDVSIDAGTYSLLVRGLCENGNLHLACSFLGEMVSKGM--VPKDS 507
             +K    L + M  N +S    T+ +++ G    G L  AC+   EMVS+G+   P+  
Sbjct: 426 GEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYG 485

Query: 508 TFKMLKEELERKSMVEEMKIIEKLMSCAT 533
           T K L   L R   +E  K +   +S  T
Sbjct: 486 TLKSLLNNLVRDDKLEMAKDVWSCISNKT 514

[Close]
BLAST of Sed0014952 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.0e-59
Identity = 136/455 (29.89%), Postives = 235/455 (51.65%), Query Frame = 0 

Query: 73  HRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGRGYVVSNTLVAQILKRFGND 132
           H   VE ++  A DA  D   +       +   V   LN     +S  L+ ++LK+  N 
Sbjct: 49  HASSVETQV-SANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNA 108

Query: 133 WIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMWELVDEMCNLSGFVSLETMT 192
            + A   F WA++Q  + H+   YN+++E LG+ KQF+ +W LVD+M      +S ET  
Sbjct: 109 GVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDM-KAKKLLSKETFA 168

Query: 193 RVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDALVKECSVEDAHKVFDEMKGS 252
            + RR ARA   KEAI AF  M ++G   +++  N ++D L K  +V DA KVFD+MK  
Sbjct: 169 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 228

Query: 253 -IPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVISFTAFIEAHCRDKNFRAV 312
               ++ S+ +L+ G+ +   L    ++  E+++ G EPDV+++   I AHC+ K +   
Sbjct: 229 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 288

Query: 313 DEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKMKKVGCVPDSSFYSSLIFI 372
                +MEQ+ C+P+   F  +++ LG  K++N+AL  +E+ K  G   ++  Y++L+  
Sbjct: 289 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 348

Query: 373 LGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQEEAALRLLRKMEEVSCKPD 432
              + R++D  +  ++M  +GV P+  TY  ++  +    + + A  + + M   SC+P 
Sbjct: 349 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPT 408

Query: 433 LKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLLVRGLCENGNLHLACSFLG 492
           + TY  +++MFC K+R+ +   + D M    V      +S L+  LC    L  AC +  
Sbjct: 409 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 468

Query: 493 EMVSKGMVPKDSTFKMLKEEL---ERKSMVEEMKI 524
           EM+  G+ P    F  LK+ L    RK  V ++ +
Sbjct: 469 EMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVV 498

[Close]
BLAST of Sed0014952 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 5.0e-59
Identity = 125/421 (29.69%), Postives = 228/421 (54.16%), Query Frame = 0 

Query: 109 ALNGRGYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQ 168
           AL+  G  VS  +V  +L RF N  +  Y FF W++ Q  Y HS   Y+ M+E   + +Q
Sbjct: 90  ALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQ 149

Query: 169 FRYMWELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNV 228
           ++ MW+L++ M      +++ET   V+R+ ARA    EAI AF  M KY +  +  A N 
Sbjct: 150 YKLMWDLINAM-RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNG 209

Query: 229 LMDALVKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGL 288
           L+ AL K  +V  A +VF+ M+     +  ++++L+ G+ K   L +A ++  E+ + G 
Sbjct: 210 LLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGC 269

Query: 289 EPDVISFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALS 348
            PD+++++  ++  C+         I+  M+   C+P    +++++H  G   ++ EA+ 
Sbjct: 270 HPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVD 329

Query: 349 MYEKMKKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVC 408
            + +M++ G   D + ++SLI    KA R+K+V  + ++M  +GV P+  + + ++  + 
Sbjct: 330 TFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLI 389

Query: 409 SHSQEEAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAG 468
              +++ A  + RKM +V C+PD  TY  ++KMFC+KK M+    +  +M K  V     
Sbjct: 390 ERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 449

Query: 469 TYSLLVRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLM 528
           T+S+L+ GLCE      AC  L EM+  G+ P   TF  L++ L ++   + +K + + M
Sbjct: 450 TFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 508

Query: 529 S 530
           +
Sbjct: 510 N 508

[Close]
BLAST of Sed0014952 vs. ExPASy TrEMBL
Match: A0A6J1C829 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111009234 PE=3 SV=1)

HSP 1 Score: 872.1 bits (2252), Expect = 1.2e-249
Identity = 438/545 (80.37%), Postives = 482/545 (88.44%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQI--AESPELPDWVKFFDTKTSS--NA 60
           MASQS+IR IF FR SIR CSS KSLCT+S STQ   +ESPELPDW KFFD+K SS  +A
Sbjct: 1   MASQSQIRIIFHFRKSIRTCSSAKSLCTISGSTQASDSESPELPDWFKFFDSKNSSHTDA 60

Query: 61  DDDIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALN 120
           DDD+FVIPPLAHW     L+ H   V+K L +A D EVDK+S++LKNR+PSP +V EALN
Sbjct: 61  DDDVFVIPPLAHWLDSQRLEAHSNVVKKTLNQASDNEVDKVSMMLKNRYPSPENVAEALN 120

Query: 121 GRGYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRY 180
           G  Y VSNTLVAQ+LKRFGNDWIPAYG F WAK QTPY HS E YNSMV+ILGRAK+F  
Sbjct: 121 GSAYRVSNTLVAQLLKRFGNDWIPAYGIFKWAKEQTPYRHSRESYNSMVDILGRAKRFGL 180

Query: 181 MWELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMD 240
           MWELVDEM  LSG+VSLETM++VIRRLARAG Y+EAIEAF+ M KYGV KDTAAMNVLMD
Sbjct: 181 MWELVDEMSRLSGYVSLETMSKVIRRLARAGRYQEAIEAFRRMEKYGVGKDTAAMNVLMD 240

Query: 241 ALVKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPD 300
           ALVKE SVEDAH VF+E+KGSIPFNLTSFNVLIHGYCKARKLDEA KIM+EVE +GLEPD
Sbjct: 241 ALVKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMDEVEKHGLEPD 300

Query: 301 VISFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYE 360
           VIS+TAFIEAHCRDK+FR V++ILVQMEQKGCRPN VTFTIIMHALGKAKQ+NEAL +YE
Sbjct: 301 VISYTAFIEAHCRDKDFRKVNKILVQMEQKGCRPNAVTFTIIMHALGKAKQLNEALKIYE 360

Query: 361 KMKKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHS 420
           KMKK GCVPDSSFYSSLIFILGKAGRLKDV+EI EDM KQGVNPDVLTY+T+ISC C+HS
Sbjct: 361 KMKKEGCVPDSSFYSSLIFILGKAGRLKDVKEIVEDMTKQGVNPDVLTYNTIISCACAHS 420

Query: 421 QEEAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYS 480
           QEE ALRLL+KME  SCKPDLKTYHPLLKMFCKKKRMKVLK LLDHMFKNDVSI+AGTYS
Sbjct: 421 QEETALRLLQKMEADSCKPDLKTYHPLLKMFCKKKRMKVLKLLLDHMFKNDVSIEAGTYS 480

Query: 481 LLVRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCA 537
           +LVRGLC+NG LHLACSF GEMVSKGM+PKDSTFKMLKEELERKSM+EE+KI+EKLMS A
Sbjct: 481 ILVRGLCDNGKLHLACSFFGEMVSKGMIPKDSTFKMLKEELERKSMLEEIKIVEKLMSYA 540

[Close]
BLAST of Sed0014952 vs. ExPASy TrEMBL
Match: A0A6J1GW25 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111457681 PE=3 SV=1)

HSP 1 Score: 867.1 bits (2239), Expect = 3.9e-248
Identity = 433/542 (79.89%), Postives = 476/542 (87.82%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTKTSSNAD--D 60
           MASQ + R IFS RNSIR C S K LCT+S STQ +ESPELPDWVKFFDT++SS++D  D
Sbjct: 1   MASQLQTRIIFSLRNSIRSCYSAKPLCTISGSTQDSESPELPDWVKFFDTRSSSHSDSED 60

Query: 61  DIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGR 120
           D+FVIPPLAHW     L+DH +  +KKLGEA D EVDKIS++LKNR+PSP +V E LNGR
Sbjct: 61  DVFVIPPLAHWLESQRLEDHSEVGKKKLGEANDNEVDKISMMLKNRYPSPENVAETLNGR 120

Query: 121 GYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMW 180
            Y VSNTLVAQ+LKRFGNDWIPAYG F WAK QTPY HS E YNSMV+ILGRAK+FR MW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDAL 240
           ELVDEM +++ +VSLETM++VIRRLARAG Y+EAIEAF+ + +YGV KDTAAMNVLMDAL
Sbjct: 181 ELVDEMSHIAAYVSLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVI 300
           VKE SVEDAH VF+E+KGSIPFNLTSFNVLIHGYCKARKLDEA KIMEE+E  GLEPDVI
Sbjct: 241 VKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEIERQGLEPDVI 300

Query: 301 SFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKM 360
           S+TAFIEAHCRDK+FR VD+ILV MEQKGCRPN VTFTIIM  LGKAKQINEAL +YEKM
Sbjct: 301 SYTAFIEAHCRDKDFRKVDKILVLMEQKGCRPNAVTFTIIMQTLGKAKQINEALKIYEKM 360

Query: 361 KKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQE 420
           KK GCVPDSSFYSSLIFILGKAGRLKDV+EI EDM  QGVNPDVLTY+TMISC C+HSQE
Sbjct: 361 KKEGCVPDSSFYSSLIFILGKAGRLKDVKEIVEDMTNQGVNPDVLTYNTMISCACAHSQE 420

Query: 421 EAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 480
           E ALRLLRKMEE SCKPDLKTYHPLLKMFC KKRMKVLKFLLDHMFKND SI+AGTYS+L
Sbjct: 421 ETALRLLRKMEEDSCKPDLKTYHPLLKMFCNKKRMKVLKFLLDHMFKNDASIEAGTYSIL 480

Query: 481 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATE 536
           VRG+C+ G +HLACSF GEMVSKGMVPKDSTFKMLKEELERK M EEMKIIEKLM CATE
Sbjct: 481 VRGMCDTGKIHLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEEMKIIEKLMLCATE 540

[Close]
BLAST of Sed0014952 vs. ExPASy TrEMBL
Match: A0A6J1ITK5 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111479224 PE=3 SV=1)

HSP 1 Score: 865.5 bits (2235), Expect = 1.1e-247
Identity = 434/542 (80.07%), Postives = 473/542 (87.27%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTKTSSNAD--D 60
           MASQ + R IFS RNSIR C S    CT+S STQ +ESPELPDWVKFFDT +SS +D  D
Sbjct: 1   MASQLQTRIIFSLRNSIRTCYSANPFCTISGSTQDSESPELPDWVKFFDTGSSSRSDSED 60

Query: 61  DIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGR 120
           D+FVIPPLAHW     L+DH K  +KKLGEA D E+DKIS++LKNR+PSP +V E LNGR
Sbjct: 61  DVFVIPPLAHWVESQRLEDHSKVGKKKLGEANDNEIDKISMMLKNRYPSPENVAETLNGR 120

Query: 121 GYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMW 180
            Y VSNTLVAQ+LKRFGNDWIPAYG F WAK QTPY HS E YNSMV+ILGRAK+FR MW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDAL 240
           ELVDEM +L+ +VSLETM++VIRRLARAG Y+EAIEAF+ + +YGV KDTAAMNVLMDAL
Sbjct: 181 ELVDEMSHLAAYVSLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVI 300
           VKE SVEDAH VF+E+KGSIPFNLTSFNVLIHGYCKARKLDEA KIMEEVE  GLEPDVI
Sbjct: 241 VKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEVERQGLEPDVI 300

Query: 301 SFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKM 360
           S+TAFIEAHCRDK+FR VD+ILV MEQKGCRPN VTFTIIM  LGKAKQINEAL +YEKM
Sbjct: 301 SYTAFIEAHCRDKDFRKVDKILVLMEQKGCRPNAVTFTIIMQTLGKAKQINEALKIYEKM 360

Query: 361 KKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQE 420
           KK GCVPDSSFYSSLIFILGKAGRLKDV+EI EDM  QGVNPDVLTY+TMISC C+HSQE
Sbjct: 361 KKEGCVPDSSFYSSLIFILGKAGRLKDVKEIVEDMTNQGVNPDVLTYNTMISCACAHSQE 420

Query: 421 EAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 480
           E ALRLLRKMEE SCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSI+AGTYS+L
Sbjct: 421 ETALRLLRKMEEDSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIEAGTYSIL 480

Query: 481 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATE 536
           VRG+C+ G +HLACSF GEMVSKGMVPKDSTFKMLKEELERK M EE KIIEKLM CATE
Sbjct: 481 VRGMCDTGKIHLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEETKIIEKLMLCATE 540

[Close]
BLAST of Sed0014952 vs. ExPASy TrEMBL
Match: A0A1S3C3M4 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496479 PE=3 SV=1)

HSP 1 Score: 829.3 bits (2141), Expect = 9.0e-237
Identity = 412/542 (76.01%), Postives = 466/542 (85.98%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTK--TSSNADD 60
           M  QSKI  IF  R S RIC   K LCT++ STQ+ ESP+LP+W+KFFDTK  T S ++D
Sbjct: 1   MVLQSKICAIFFLRRSFRICYLAKPLCTITGSTQVPESPDLPNWIKFFDTKTCTHSESED 60

Query: 61  DIFVIPPLAHWLQ-----DHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGR 120
           D+FVIPPLAHWL+     D+ K V+KKL E  D EVDKIS +L+NR+PSP +V EALNG+
Sbjct: 61  DVFVIPPLAHWLEPQKLKDNDKVVQKKLVETSDNEVDKISTMLENRYPSPENVAEALNGK 120

Query: 121 GYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMW 180
            Y VSN L+ Q+LKRF NDWI AYG F WAK QTPY HS E YNSMV+ILG+AK FR MW
Sbjct: 121 AYRVSNNLIGQLLKRFQNDWIRAYGIFKWAKDQTPYRHSPESYNSMVDILGKAKNFRLMW 180

Query: 181 ELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDAL 240
           ELVDEM +L+G VSLETM++VIRRLA+AG ++EAI+AF+ +GKYGV  DT AMNVLMDAL
Sbjct: 181 ELVDEMNHLAGCVSLETMSKVIRRLAKAGRHQEAIDAFRSIGKYGVSTDTTAMNVLMDAL 240

Query: 241 VKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVI 300
           VKE SVEDAH VF+E+K SIPFNL SFNVLIHGYCKA+KLDEA KIM EVE  GLEPDVI
Sbjct: 241 VKEGSVEDAHNVFEELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVI 300

Query: 301 SFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKM 360
           S+TAFIEAHCR+K+FR VD++LVQME KGC+PNV+TFTIIMHALGKAKQI EAL +YEKM
Sbjct: 301 SYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQIYEALKVYEKM 360

Query: 361 KKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQE 420
           KK GCVPDSSFYSSLIFILGKAGRL DV+EI EDM KQGVNPDVLTY+T+ISC C+HSQE
Sbjct: 361 KKEGCVPDSSFYSSLIFILGKAGRLVDVKEIVEDMEKQGVNPDVLTYNTLISCACAHSQE 420

Query: 421 EAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 480
           E AL LLRKMEEVSCKPDLKTYHPLLKMFCKKKRMK+LKFLLD MFKNDVSI+AGTY++L
Sbjct: 421 ETALTLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKMLKFLLDQMFKNDVSIEAGTYAIL 480

Query: 481 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATE 536
           VRG+CENG LHLACSF GEM+SKGMVPKDSTFKMLKEELERKSM+EEMKI+EKLMSCAT 
Sbjct: 481 VRGMCENGKLHLACSFFGEMLSKGMVPKDSTFKMLKEELERKSMLEEMKIVEKLMSCATN 540

[Close]
BLAST of Sed0014952 vs. ExPASy TrEMBL
Match: A0A0A0LPW6 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G385030 PE=3 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 3.4e-236
Identity = 411/542 (75.83%), Postives = 465/542 (85.79%), Query Frame = 0 

Query: 1   MASQSKIRTIFSFRNSIRICSSPKSLCTVSESTQIAESPELPDWVKFFDTKTSSN--ADD 60
           M  QS+I TIF  R S R C   K LCT++ ST+++ESP+LPDW+KFFDTKTS++  ++D
Sbjct: 5   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 64

Query: 61  DIFVIPPLAHW-----LQDHRKPVEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGR 120
           D+FVIPPLAHW     L+D+ K V+KKLGE  + EVDKIS +L+NR+PSP +V EALNG+
Sbjct: 65  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 124

Query: 121 GYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMW 180
            Y VSNTLVAQ+LKRF NDWI AYG F WAK Q PY HS E YNSMV+ILG+AK FR MW
Sbjct: 125 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 184

Query: 181 ELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDAL 240
           ELVDEM +L+G VSLETM++VIRRLARAG ++EAI AF+ + KYG+  DT AMNVLMDAL
Sbjct: 185 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 244

Query: 241 VKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVI 300
           VKE SVEDAH VF E+K SIPFNL SFNVLIHGYCKA+KLDEA KIM EVE  GLEPDVI
Sbjct: 245 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVI 304

Query: 301 SFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKM 360
           S+TAFIEAHCR+K+FR VD++LVQME KGC+PNV+TFTIIMHALGKAKQINEAL +YEKM
Sbjct: 305 SYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKM 364

Query: 361 KKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQE 420
           KK GCVPDSSFYSSLIFILGKAGRL DV+EI EDM KQGV PDVLTY+T+ISC C+HSQE
Sbjct: 365 KKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQE 424

Query: 421 EAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 480
           E AL LL KMEEVSCKPDLKTYHPLLKMFC+KKRMKVLKFLLDHMFKNDVSI+AGTY++L
Sbjct: 425 ETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAIL 484

Query: 481 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATE 536
           VRGLCENG LHLACSF GEM+SK MVPKDSTFKMLKEELERKSM+EEMKIIE LM CAT 
Sbjct: 485 VRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN 544

[Close]
BLAST of Sed0014952 vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 505.0 bits (1299), Expect = 7.5e-143
Identity = 268/525 (51.05%), Postives = 362/525 (68.95%), Query Frame = 0 

Query: 28  TVSESTQI-AESPELPDWVK-FFDTKTSSNA-----DDDIFVIPPLAHWLQDHR----KP 87
           T  ES  + AESPELP W+K F   K SS++     DD+ FVIP LA+W++  +    + 
Sbjct: 30  TAEESPIVAAESPELPSWIKDFLSNKPSSSSSSVSKDDEDFVIPSLANWVESQKFSRQQV 89

Query: 88  VEKKLGEAGDAEVDKISLILKNRHPSPGDVVEALNGRGYVVSNTLVAQILKRFGNDWIPA 147
            E  + +    ++DK+   L  +  S  DVV+ L+    VV+ +LV Q+L+RF N W  A
Sbjct: 90  SEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQA 149

Query: 148 YGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMWELVDEM--CNLSGFVSLETMTRV 207
           YGFF+WA  QT Y HS   YN+MV++LG+ + F  MWELV+EM     S  V+L+TM++V
Sbjct: 150 YGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKV 209

Query: 208 IRRLARAGMYKEAIEAFKGMGK-YGVCKDTAAMNVLMDALVKECSVEDAHKVFDEMKGSI 267
           +RRLA++G Y +A++AF  M K YGV  DT AMN LMDALVKE S+E AH+VF ++  +I
Sbjct: 210 MRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTI 269

Query: 268 PFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVISFTAFIEAHCRDKNFRAVDE 327
             +  +FN+LIHG+CKARK D+A  +M+ ++     PDV+++T+F+EA+C++ +FR V+E
Sbjct: 270 KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE 329

Query: 328 ILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKMKKVGCVPDSSFYSSLIFILG 387
           +L +M + GC PNVVT+TI+MH+LGK+KQ+ EAL +YEKMK+ GCVPD+ FYSSLI IL 
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389

Query: 388 KAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVCSHSQEEAALRLLRKMEE---VSCKP 447
           K GR KD  EI EDM  QGV  DVL Y+TMIS    HS++E ALRLL++ME+    SC P
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSP 449

Query: 448 DLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLLVRGLCENGNLHLACSFL 507
           +++TY PLLKM C KK+MK+L  LL HM KNDVSID  TY LL+RGLC +G +  AC F 
Sbjct: 450 NVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFF 509

Query: 508 GEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLMSCATEQD 536
            E V KGMVP+DST KML +ELE+K+M E    I+ L+   T  D
Sbjct: 510 EEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSKTMID 554

[Close]
BLAST of Sed0014952 vs. TAIR 10
Match: AT3G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 2.6e-79
Identity = 159/415 (38.31%), Postives = 257/415 (61.93%), Query Frame = 0 

Query: 117 VSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMWELV 176
           +S+ LV ++L RF +DW  A G   WA+    + HS++ Y+  V+ILG+AK++  M E V
Sbjct: 85  LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV 144

Query: 177 DEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDALVKE 236
           + M      V+L T+ +++RR A AG ++EA+  F  +G++G+ K+T +MN+L+D L KE
Sbjct: 145 ERMRG-DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKE 204

Query: 237 CSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVISFT 296
             VE A  V  ++K  I  N  +FN+ IHG+CKA +++EAL  ++E++ +G  P VIS+T
Sbjct: 205 KRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 264

Query: 297 AFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKMKKV 356
             I  +C+   F  V E+L +ME  G  PN +T+T IM +L   K+  EAL +  +MK+ 
Sbjct: 265 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 324

Query: 357 GCVPDSSFYSSLIFILGKAGRLKDVEEIAE-DMAKQGVNPDVLTYSTMISCVCSHSQEEA 416
           GC PDS FY+ LI  L +AGRL++ E +   +M + GV+ +  TY++MI+  C H +E+ 
Sbjct: 325 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 384

Query: 417 ALRLLRKMEEVS-CKPDLKTYHPLLK-MFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 476
           A+ LL++ME  + C PD+ TY PLL+  F +   ++V K L + + K+ +S+D  TY+ L
Sbjct: 385 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 444

Query: 477 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLM 529
           ++ LC       A     EM+S+ + P+  T  +L EE+++K+M E  + IE +M
Sbjct: 445 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498

[Close]
BLAST of Sed0014952 vs. TAIR 10
Match: AT3G04130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 293.9 bits (751), Expect = 2.6e-79
Identity = 159/415 (38.31%), Postives = 257/415 (61.93%), Query Frame = 0 

Query: 117 VSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQFRYMWELV 176
           +S+ LV ++L RF +DW  A G   WA+    + HS++ Y+  V+ILG+AK++  M E V
Sbjct: 85  LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV 144

Query: 177 DEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNVLMDALVKE 236
           + M      V+L T+ +++RR A AG ++EA+  F  +G++G+ K+T +MN+L+D L KE
Sbjct: 145 ERMRG-DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKE 204

Query: 237 CSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGLEPDVISFT 296
             VE A  V  ++K  I  N  +FN+ IHG+CKA +++EAL  ++E++ +G  P VIS+T
Sbjct: 205 KRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 264

Query: 297 AFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALSMYEKMKKV 356
             I  +C+   F  V E+L +ME  G  PN +T+T IM +L   K+  EAL +  +MK+ 
Sbjct: 265 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 324

Query: 357 GCVPDSSFYSSLIFILGKAGRLKDVEEIAE-DMAKQGVNPDVLTYSTMISCVCSHSQEEA 416
           GC PDS FY+ LI  L +AGRL++ E +   +M + GV+ +  TY++MI+  C H +E+ 
Sbjct: 325 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 384

Query: 417 ALRLLRKMEEVS-CKPDLKTYHPLLK-MFCKKKRMKVLKFLLDHMFKNDVSIDAGTYSLL 476
           A+ LL++ME  + C PD+ TY PLL+  F +   ++V K L + + K+ +S+D  TY+ L
Sbjct: 385 AIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFL 444

Query: 477 VRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLM 529
           ++ LC       A     EM+S+ + P+  T  +L EE+++K+M E  + IE +M
Sbjct: 445 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498

[Close]
BLAST of Sed0014952 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 6.3e-65
Identity = 148/449 (32.96%), Postives = 239/449 (53.23%), Query Frame = 0 

Query: 88  EVDKISLILKNRHPSPGDVVEALNGRGYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQT 147
           EV+KI  IL+N H     +  ALN  G  +   L+ ++L R G+     Y FF+WA  Q 
Sbjct: 66  EVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQP 125

Query: 148 PYGHSAELYNSMVEILGRAKQFRYMWELVDEMCNLS-GFVSLETMTRVIRRLARAGMYKE 207
            Y HS E+  SMV IL + +QF  +W L++EM   +   +  E    ++RR A A M K+
Sbjct: 126 GYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKK 185

Query: 208 AIEAFKGMGKYGVCKDTAAMNVLMDALVKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHG 267
           A+E    M KYG+  D      L+DAL K  SV++A KVF++M+   P NL  F  L++G
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYG 245

Query: 268 YCKARKLDEALKIMEEVENYGLEPDVISFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPN 327
           +C+  KL EA +++ +++  GLEPD++ FT  +  +          +++  M ++G  PN
Sbjct: 246 WCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPN 305

Query: 328 VVTFTIIMHALGKA-KQINEALSMYEKMKKVGCVPDSSFYSSLIFILGKAGRLKDVEEIA 387
           V  +T+++ AL +  K+++EA+ ++ +M++ GC  D   Y++LI    K G +     + 
Sbjct: 306 VNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVL 365

Query: 388 EDMAKQGVNPDVLTYSTMISCVCSHSQEEAALRLLRKMEEVSCKPDLKTYHPLLKMFCKK 447
           +DM K+GV P  +TY  ++       Q E  L L+ KM+   C PDL  Y+ ++++ CK 
Sbjct: 366 DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKL 425

Query: 448 KRMKVLKFLLDHMFKNDVSIDAGTYSLLVRGLCENGNLHLACSFLGEMVSKGM--VPKDS 507
             +K    L + M  N +S    T+ +++ G    G L  AC+   EMVS+G+   P+  
Sbjct: 426 GEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYG 485

Query: 508 TFKMLKEELERKSMVEEMKIIEKLMSCAT 533
           T K L   L R   +E  K +   +S  T
Sbjct: 486 TLKSLLNNLVRDDKLEMAKDVWSCISNKT 514

[Close]
BLAST of Sed0014952 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 230.3 bits (586), Expect = 3.6e-60
Identity = 125/421 (29.69%), Postives = 228/421 (54.16%), Query Frame = 0 

Query: 109 ALNGRGYVVSNTLVAQILKRFGNDWIPAYGFFMWAKHQTPYGHSAELYNSMVEILGRAKQ 168
           AL+  G  VS  +V  +L RF N  +  Y FF W++ Q  Y HS   Y+ M+E   + +Q
Sbjct: 90  ALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQ 149

Query: 169 FRYMWELVDEMCNLSGFVSLETMTRVIRRLARAGMYKEAIEAFKGMGKYGVCKDTAAMNV 228
           ++ MW+L++ M      +++ET   V+R+ ARA    EAI AF  M KY +  +  A N 
Sbjct: 150 YKLMWDLINAM-RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNG 209

Query: 229 LMDALVKECSVEDAHKVFDEMKGSIPFNLTSFNVLIHGYCKARKLDEALKIMEEVENYGL 288
           L+ AL K  +V  A +VF+ M+     +  ++++L+ G+ K   L +A ++  E+ + G 
Sbjct: 210 LLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGC 269

Query: 289 EPDVISFTAFIEAHCRDKNFRAVDEILVQMEQKGCRPNVVTFTIIMHALGKAKQINEALS 348
            PD+++++  ++  C+         I+  M+   C+P    +++++H  G   ++ EA+ 
Sbjct: 270 HPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVD 329

Query: 349 MYEKMKKVGCVPDSSFYSSLIFILGKAGRLKDVEEIAEDMAKQGVNPDVLTYSTMISCVC 408
            + +M++ G   D + ++SLI    KA R+K+V  + ++M  +GV P+  + + ++  + 
Sbjct: 330 TFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLI 389

Query: 409 SHSQEEAALRLLRKMEEVSCKPDLKTYHPLLKMFCKKKRMKVLKFLLDHMFKNDVSIDAG 468
              +++ A  + RKM +V C+PD  TY  ++KMFC+KK M+    +  +M K  V     
Sbjct: 390 ERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 449

Query: 469 TYSLLVRGLCENGNLHLACSFLGEMVSKGMVPKDSTFKMLKEELERKSMVEEMKIIEKLM 528
           T+S+L+ GLCE      AC  L EM+  G+ P   TF  L++ L ++   + +K + + M
Sbjct: 450 TFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 508

Query: 529 S 530
           +
Sbjct: 510 N 508

The following BLAST results are available for this feature:
BLAST of Sed0014952 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023527160.11.9e-24980.63pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita ... [more]
XP_022137945.12.5e-24980.37pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Momordica ... [more]
XP_022955800.18.1e-24879.89pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita ... [more]
XP_022979545.12.4e-24780.07pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita ... [more]
KAG7018726.12.4e-24779.89Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
BLAST of Sed0014952 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LUJ41.1e-14151.05Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... [more]
Q9M8W93.7e-7838.31Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidop... [more]
P0C8A08.9e-6432.96Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... [more]
Q9C9A25.0e-5929.89Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
Q9FVX25.0e-5929.69Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
BLAST of Sed0014952 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C8291.2e-24980.37pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Momordic... [more]
A0A6J1GW253.9e-24879.89pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Cucurbit... [more]
A0A6J1ITK51.1e-24780.07pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Cucurbit... [more]
A0A1S3C3M49.0e-23776.01pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Cucumis ... [more]
A0A0A0LPW63.4e-23675.83PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G385030 PE... [more]
BLAST of Sed0014952 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G22670.17.5e-14351.05Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G04130.12.6e-7938.31Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G04130.22.6e-7938.31Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G49730.16.3e-6532.96Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G77360.13.6e-6029.69Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 190..219
e-value: 0.0098
score: 16.1
coord: 156..180
e-value: 0.28
score: 11.5
coord: 226..251
e-value: 0.0011
score: 19.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 278..339
e-value: 4.9E-15
score: 55.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 399..431
e-value: 5.8E-7
score: 27.3
coord: 469..500
e-value: 5.3E-7
score: 27.4
coord: 192..222
e-value: 0.0015
score: 16.6
coord: 365..397
e-value: 9.3E-4
score: 17.2
coord: 155..181
e-value: 0.0015
score: 16.6
coord: 259..292
e-value: 1.1E-8
score: 32.7
coord: 227..250
e-value: 1.9E-5
score: 22.6
coord: 293..327
e-value: 2.7E-6
score: 25.2
coord: 328..362
e-value: 1.9E-10
score: 38.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 466..500
score: 11.805378
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 222..252
score: 8.856788
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 187..221
score: 8.61564
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 10.500983
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 13.098811
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 12.386327
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 11.169622
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 10.731171
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 388..536
e-value: 2.1E-32
score: 114.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 116..251
e-value: 1.3E-21
score: 79.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 252..387
e-value: 4.4E-37
score: 130.1
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 377..510
e-value: 3.8E-13
score: 49.2
NoneNo IPR availablePANTHERPTHR47933:SF26PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIALcoord: 31..534
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 31..534

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0014952.1Sed0014952.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding