Sed0014930 (gene) Chayote v1

Overview


Name	Sed0014930
Type	gene
Organism	Sechium edule (Chayote v1)
Description	homeobox-leucine zipper protein ATHB-5-like
Location	LG13: 26103988 .. 26105244 (-)
RNA-Seq Expression	Sed0014930
Synteny	Sed0014930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCACTTAAACAAAAGCCTCCATGAAAGTTTCTTTTCAGCTAAATGCTTGGCTTTGTCCTATAAACTGAAAGCTGAGAAAGGCAGAAGCAGAATCATTTTGATTTCACCATTTACTCTGTTTATTTTTTGTTGCTATCTTACCATGAAGAGATTTGCACACTCAGAATTCTTTGCTTCTTTCATCTCCTCAAATGGTAAATAATTCTCAAAATCAAATACCCATATGAAAAAAATGCATCTTTTCTTCTGAAGAAGCCTCTGTTTTTGTTTCAGATCAATCGAGCTCCACCGCGAATGGCGGCGGCGGGTACAGCAAGGAATTTCAGGCAATGTTGAACAGTTTAGAGGAAGAAGACGGCAGGGCAGACGGCGGCGCAACGGCGGCGGCGGTGCGAAAGCGGCGGCTGAGGGTGGATCAAGTGAAGGGATTGGAGAAACATTTCGAAGTGGAAAACAAGCTTGAACCAGAGAGGAAAATGAAGATAGCTGCTGACTTGGAGCTTGAGCCAAGGCAAGTCACCATTTGGTTTCAAAATCGAAGAGCCCGTTGGAAAACTAAGCAATTAGAGAGAGATTATGGAGTTCTTAAGCTCAATTATGATGCCCTTAAACTCGATTATGATGTTCTTGAGAAGCAAAACTCTTCTCTTGCTTCTAAGGTAATGAAAATCATCTCCATTTTCGATTTTGAAAATTGGGTTTTGGCTGTGATTTTGATTTTGAAATGGGAATTTATTGGCAGGTGAGAGAATTGAGGGAAAAAGTAAGCAAAGATGGGAATTCAATTCTGGAAATTTCTGGGAAAGATTATGAAAATCAGAGTGTGTTTAGGAAGGTGATTCATGAGGATCAAAGTTTGTTTGATACAGAGGAGCCTTGCAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCACTGGTAAACTCATGTGTTCTTCCATATTTTTACCATTTTTCTTTCATCTCTTTTTTTTTTTTTAATCTTAATGTTTTGAGTAGACCATATGCAAATATAGTCTCATATTGATTAGATGAGAATCATCCTTAATGTATAACTCAGGATTATAATATCTTTATTGGTACAAGACATATCTTCAATTGGAACTAAACAAAGTAATTTAACACTATAATATCATATCATTATGAAAATTTGAAGAAATAACTTCTTCTTCTTTTTTTTTGAAAGAAGAAATAACTTCCTTTTAAACTTGAATTAAGTTGAAATATAATAATTCAATCTACATTTAAAACATCGA

mRNA sequence

TCCCACTTAAACAAAAGCCTCCATGAAAGTTTCTTTTCAGCTAAATGCTTGGCTTTGTCCTATAAACTGAAAGCTGAGAAAGGCAGAAGCAGAATCATTTTGATTTCACCATTTACTCTGTTTATTTTTTGTTGCTATCTTACCATGAAGAGATTTGCACACTCAGAATTCTTTGCTTCTTTCATCTCCTCAAATGATCAATCGAGCTCCACCGCGAATGGCGGCGGCGGGTACAGCAAGGAATTTCAGGCAATGTTGAACAGTTTAGAGGAAGAAGACGGCAGGGCAGACGGCGGCGCAACGGCGGCGGCGGTGCGAAAGCGGCGGCTGAGGGTGGATCAAGTGAAGGGATTGGAGAAACATTTCGAAGTGGAAAACAAGCTTGAACCAGAGAGGAAAATGAAGATAGCTGCTGACTTGGAGCTTGAGCCAAGGCAAGTCACCATTTGGTTTCAAAATCGAAGAGCCCGTTGGAAAACTAAGCAATTAGAGAGAGATTATGGAGTTCTTAAGCTCAATTATGATGCCCTTAAACTCGATTATGATGTTCTTGAGAAGCAAAACTCTTCTCTTGCTTCTAAGGTGAGAGAATTGAGGGAAAAAGTAAGCAAAGATGGGAATTCAATTCTGGAAATTTCTGGGAAAGATTATGAAAATCAGAGTGTGTTTAGGAAGGTGATTCATGAGGATCAAAGTTTGTTTGATACAGAGGAGCCTTGCAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCACTGGTAAACTCATGTGTTCTTCCATATTTTTACCATTTTTCTTTCATCTCTTTTTTTTTTTTTAATCTTAATGTTTTGAGTAGACCATATGCAAATATAGTCTCATATTGATTAGATGAGAATCATCCTTAATGTATAACTCAGGATTATAATATCTTTATTGGTACAAGACATATCTTCAATTGGAACTAAACAAAGTAATTTAACACTATAATATCATATCATTATGAAAATTTGAAGAAATAACTTCTTCTTCTTTTTTTTTGAAAGAAGAAATAACTTCCTTTTAAACTTGAATTAAGTTGAAATATAATAATTCAATCTACATTTAAAACATCGA

Coding sequence (CDS)

ATGAAGAGATTTGCACACTCAGAATTCTTTGCTTCTTTCATCTCCTCAAATGATCAATCGAGCTCCACCGCGAATGGCGGCGGCGGGTACAGCAAGGAATTTCAGGCAATGTTGAACAGTTTAGAGGAAGAAGACGGCAGGGCAGACGGCGGCGCAACGGCGGCGGCGGTGCGAAAGCGGCGGCTGAGGGTGGATCAAGTGAAGGGATTGGAGAAACATTTCGAAGTGGAAAACAAGCTTGAACCAGAGAGGAAAATGAAGATAGCTGCTGACTTGGAGCTTGAGCCAAGGCAAGTCACCATTTGGTTTCAAAATCGAAGAGCCCGTTGGAAAACTAAGCAATTAGAGAGAGATTATGGAGTTCTTAAGCTCAATTATGATGCCCTTAAACTCGATTATGATGTTCTTGAGAAGCAAAACTCTTCTCTTGCTTCTAAGGTGAGAGAATTGAGGGAAAAAGTAAGCAAAGATGGGAATTCAATTCTGGAAATTTCTGGGAAAGATTATGAAAATCAGAGTGTGTTTAGGAAGGTGATTCATGAGGATCAAAGTTTGTTTGATACAGAGGAGCCTTGCAATTTCTGTTCTGTTGATCAAGCTCCTTCTCTCCACTGGTAA

Protein sequence

MKRFAHSEFFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGATAAAVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQLERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDGNSILEISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW

Homology

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BLAST of Sed0014930 vs. NCBI nr
Match: XP_038896275.1 (homeobox-leucine zipper protein ATHB-6-like isoform X2 [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 7.2e-72
Identity = 158/238 (66.39%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MKRFAHSE---FFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADG--GATAA 60
           MKRF HSE    F SF S N+Q SS     G YSKEFQAML+SLEEED   DG  G  +A
Sbjct: 1   MKRFGHSESLDSFISFFSPNEQQSSKTI--GAYSKEFQAMLDSLEEEDNSEDGSSGGGSA 60

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
             RKR L++DQVK LE+HFEVENKLEPERKM+IAA+LELEPRQVTIWFQNRRARWKTKQL
Sbjct: 61  PERKRLLKLDQVKALERHFEVENKLEPERKMRIAAELELEPRQVTIWFQNRRARWKTKQL 120

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKV--------------------- 180
           E+DYGVLKLNYDALKLDYDVLEK+N+SLASKV+ELREKV                     
Sbjct: 121 EKDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNREGTEMKIQREVRNGSMEKD 180

Query: 181 -SKDGNSIL------EISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
            ++DGNS +      E SGK YENQ+ F K ++EDQSL +TEEPCNFCSVDQAPSLHW
Sbjct: 181 SNRDGNSYISMLNCFEFSGKVYENQNQFTKAMNEDQSLINTEEPCNFCSVDQAPSLHW 236

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BLAST of Sed0014930 vs. NCBI nr
Match: XP_023524359.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023524360.1 homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023524361.1 homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023524362.1 homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023524363.1 homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.1 bits (710), Expect = 6.1e-71
Identity = 158/238 (66.39%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MKRFAHSE---FFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGAT--AA 60
           M RF  SE    F+S  +  +Q SST    GGYSKEFQAML+SLEEED   DGG +  +A
Sbjct: 2   MMRFDRSESLDSFSSIFTPKEQPSSTTI--GGYSKEFQAMLDSLEEEDNSEDGGGSSGSA 61

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
             RKRRL+ DQVK LE+HFEVENKLEPERKMKIA +LELEPRQVTIWFQNRRARWKTKQL
Sbjct: 62  PERKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQL 121

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDG----------------- 180
           ERDYGVLK NYDALKLDYDVLEK+N+SLASKVRELREKVS++G                 
Sbjct: 122 ERDYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFV 181

Query: 181 --------NSIL---EISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
                   NS+L   E+S K YENQ+ F K ++EDQSLF+TEEPCNFCSVDQAPSLHW
Sbjct: 182 STNNNSSLNSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of Sed0014930 vs. NCBI nr
Match: XP_022940501.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita moschata])

HSP 1 Score: 276.9 bits (707), Expect = 1.4e-70
Identity = 155/238 (65.13%), Postives = 174/238 (73.11%), Query Frame = 0


Query: 1   MKRFAHSE---FFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGAT--AA 60
           M RF  SE    F+S  +  +Q SST    GGYSKEFQAML+SLEEED   DGG +  +A
Sbjct: 2   MMRFDRSESLDSFSSIFTPKEQPSSTTI--GGYSKEFQAMLDSLEEEDNSEDGGGSSGSA 61

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
             RKRRL+ DQVK LE+HFEVENKLEPERKMKIA +LELEPRQVTIWFQNRRARWKTKQL
Sbjct: 62  PERKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQL 121

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDGNSI-------------- 180
           ERDYGVLK NYDALKLDYDVLEK+N+SLASKVRELREKVS++G  +              
Sbjct: 122 ERDYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFV 181

Query: 181 --------------LEISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
                          E+S K YENQ+ F K ++EDQSLF+TEEPCNFCSVDQAPSLHW
Sbjct: 182 STNNNSSLSSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of Sed0014930 vs. NCBI nr
Match: KAG6608262.1 (Homeobox-leucine zipper protein ATHB-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.9 bits (707), Expect = 1.4e-70
Identity = 155/238 (65.13%), Postives = 174/238 (73.11%), Query Frame = 0


Query: 1   MKRFAHSE---FFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGAT--AA 60
           M RF  SE    F+S  +  +Q SST    GGYSKEFQAML+SLEEED   DGG +  +A
Sbjct: 2   MMRFDRSESLDSFSSIFAPKEQPSSTTI--GGYSKEFQAMLDSLEEEDNSEDGGGSSGSA 61

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
             RKRRL+ DQVK LE+HFEVENKLEPERKMKIA +LELEPRQVTIWFQNRRARWKTKQL
Sbjct: 62  PERKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQL 121

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDGNSI-------------- 180
           ERDYGVLK NYDALKLDYDVLEK+N+SLASKVRELREKVS++G  +              
Sbjct: 122 ERDYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFV 181

Query: 181 --------------LEISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
                          E+S K YENQ+ F K ++EDQSLF+TEEPCNFCSVDQAPSLHW
Sbjct: 182 STNNNSSLSSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of Sed0014930 vs. NCBI nr
Match: XP_022982007.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita maxima])

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-70
Identity = 157/238 (65.97%), Postives = 176/238 (73.95%), Query Frame = 0


Query: 1   MKRFAHSE---FFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGAT--AA 60
           M RF   E    F+S  +  +Q SST    GGYSKEFQAML+SLEEED   DGG +  +A
Sbjct: 2   MMRFDRPESLDSFSSIFTPKEQPSSTTI--GGYSKEFQAMLDSLEEEDNSEDGGGSSGSA 61

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
             RKRRL+ DQVK LE+HFEVENKLEPERKMKIA +LELEPRQVTIWFQNRRARWKTKQL
Sbjct: 62  PERKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQL 121

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDG----------------- 180
           ERDYGVLK NYDALKLDYDVLEK+N+SLASKVRELREKVS++G                 
Sbjct: 122 ERDYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFV 181

Query: 181 --------NSIL---EISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
                   NS+L   E+S K YENQ+ F K ++EDQSLF+TEEPCNFCSVDQAPSLHW
Sbjct: 182 STNNNSSLNSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of Sed0014930 vs. ExPASy Swiss-Prot
Match: P46667 (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35
Identity = 85/181 (46.96%), Postives = 117/181 (64.64%), Query Frame = 0


Query: 25  NGGGGYSKEFQAMLNSLEEED-GRADGGATAAAVRKRRLRVDQVKGLEKHFEVENKLEPE 84
           +G G YS+ F A+ +    ED G     ++ AA +KRRL V+QVK LEK+FE++NKLEPE
Sbjct: 38  SGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPE 97

Query: 85  RKMKIAADLELEPRQVTIWFQNRRARWKTKQLERDYGVLKLNYDALKLDYDVLEKQNSSL 144
           RK+K+A +L L+PRQV IWFQNRRARWKTKQLERDYGVLK N+DALK + D L++ N SL
Sbjct: 98  RKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSL 157

Query: 145 ASKVRELREKVSKDGNSILEISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSL 204
             +++EL+ K++ +G   +E +G          K +  +QS+    E         +P  
Sbjct: 158 LGQIKELKAKLNVEGVKGIEENGA--------LKAVEANQSVMANNEVLELSHRSPSPPP 210

[Close]

BLAST of Sed0014930 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 81/165 (49.09%), Postives = 111/165 (67.27%), Query Frame = 0


Query: 1   MKRFAHSEFFASFIS-----SNDQSSSTANGGGGYSKEFQAMLNSLEEEDGR--ADGGAT 60
           MKR + S+     IS     S D+ S    GG    +EFQ+ML   EEE+     + G  
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSPRRYGG----REFQSMLEGYEEEEEAIVEERGHV 61

Query: 61  AAAVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTK 120
             + +KRRL ++QVK LEK+FE+ENKLEPERK+K+A +L L+PRQV +WFQNRRARWKTK
Sbjct: 62  GLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 121

Query: 121 QLERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDG 159
           QLE+DYGVLK  YD+L+ ++D L + N SL  ++ +L+ K++  G
Sbjct: 122 QLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGG 162

[Close]

BLAST of Sed0014930 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-32
Identity = 82/192 (42.71%), Postives = 120/192 (62.50%), Query Frame = 0


Query: 1   MKRFAHSEFFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEE-----EDGRADGGATAA 60
           MKR + S+     IS++    S      GY   +Q+ML   +E     E+   +      
Sbjct: 1   MKRLSSSDSMCGLISTSTDEQSPR----GYGSNYQSMLEGYDEDATLIEEYSGNHHHMGL 60

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
           + +KRRL+VDQVK LEK+FE+ENKLEPERK K+A +L L+PRQV +WFQNRRARWKTKQL
Sbjct: 61  SEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQL 120

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVS--KDGNSILEISGKDYENQS 180
           E+DYGVLK  YD+L+ ++D L + N SL  ++ +++ KV+  +D N+   I+      + 
Sbjct: 121 EKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAIT------EG 180

Query: 181 VFRKVIHEDQSL 186
           V  + +H+  S+
Sbjct: 181 VKEEEVHKTDSI 182

[Close]

BLAST of Sed0014930 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.4e-30
Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 26  GGGGYSKEFQAMLNSLE--------------EEDGRADGGATAAAVRKRRLRVDQVKGLE 85
           GGGG S     M NS +              EE+  A GG      +KRRL V+QV+ LE
Sbjct: 8   GGGGGSPSLVTMANSSDDGYGGVGMEAEGDVEEEMMACGG---GGEKKRRLSVEQVRALE 67

Query: 86  KHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQLERDYGVLKLNYDALKL 145
           + FEVENKLEPERK ++A DL L+PRQV +WFQNRRARWKTKQLERDY  L+ +YD+L+L
Sbjct: 68  RSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRL 127

Query: 146 DYDVLEKQNSSLASKVRELREKVSKD 158
           D+D L +   +L ++++EL+ K+  +
Sbjct: 128 DHDALRRDKDALLAEIKELKAKLGDE 150

[Close]

BLAST of Sed0014930 vs. ExPASy Swiss-Prot
Match: Q6K498 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.4e-30
Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 26  GGGGYSKEFQAMLNSLE--------------EEDGRADGGATAAAVRKRRLRVDQVKGLE 85
           GGGG S     M NS +              EE+  A GG      +KRRL V+QV+ LE
Sbjct: 8   GGGGGSPSLVTMANSSDDGYGGVGMEAEGDVEEEMMACGG---GGEKKRRLSVEQVRALE 67

Query: 86  KHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQLERDYGVLKLNYDALKL 145
           + FEVENKLEPERK ++A DL L+PRQV +WFQNRRARWKTKQLERDY  L+ +YD+L+L
Sbjct: 68  RSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRL 127

Query: 146 DYDVLEKQNSSLASKVRELREKVSKD 158
           D+D L +   +L ++++EL+ K+  +
Sbjct: 128 DHDALRRDKDALLAEIKELKAKLGDE 150

[Close]

BLAST of Sed0014930 vs. ExPASy TrEMBL
Match: A0A6J1FIN2 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC111446073 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.6e-71
Identity = 155/238 (65.13%), Postives = 174/238 (73.11%), Query Frame = 0


Query: 1   MKRFAHSE---FFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGAT--AA 60
           M RF  SE    F+S  +  +Q SST    GGYSKEFQAML+SLEEED   DGG +  +A
Sbjct: 2   MMRFDRSESLDSFSSIFTPKEQPSSTTI--GGYSKEFQAMLDSLEEEDNSEDGGGSSGSA 61

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
             RKRRL+ DQVK LE+HFEVENKLEPERKMKIA +LELEPRQVTIWFQNRRARWKTKQL
Sbjct: 62  PERKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQL 121

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDGNSI-------------- 180
           ERDYGVLK NYDALKLDYDVLEK+N+SLASKVRELREKVS++G  +              
Sbjct: 122 ERDYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFV 181

Query: 181 --------------LEISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
                          E+S K YENQ+ F K ++EDQSLF+TEEPCNFCSVDQAPSLHW
Sbjct: 182 STNNNSSLSSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of Sed0014930 vs. ExPASy TrEMBL
Match: A0A6J1IVI4 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita maxima OX=3661 GN=LOC111480988 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.1e-70
Identity = 157/238 (65.97%), Postives = 176/238 (73.95%), Query Frame = 0


Query: 1   MKRFAHSE---FFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGAT--AA 60
           M RF   E    F+S  +  +Q SST    GGYSKEFQAML+SLEEED   DGG +  +A
Sbjct: 2   MMRFDRPESLDSFSSIFTPKEQPSSTTI--GGYSKEFQAMLDSLEEEDNSEDGGGSSGSA 61

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
             RKRRL+ DQVK LE+HFEVENKLEPERKMKIA +LELEPRQVTIWFQNRRARWKTKQL
Sbjct: 62  PERKRRLKPDQVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQL 121

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDG----------------- 180
           ERDYGVLK NYDALKLDYDVLEK+N+SLASKVRELREKVS++G                 
Sbjct: 122 ERDYGVLKANYDALKLDYDVLEKENASLASKVRELREKVSREGTKMKIQRELKDEKNSFV 181

Query: 181 --------NSIL---EISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
                   NS+L   E+S K YENQ+ F K ++EDQSLF+TEEPCNFCSVDQAPSLHW
Sbjct: 182 STNNNSSLNSMLNSFELSRKVYENQTQFTKAMNEDQSLFNTEEPCNFCSVDQAPSLHW 237

[Close]

BLAST of Sed0014930 vs. ExPASy TrEMBL
Match: A0A6J1DSK6 (homeobox-leucine zipper protein ATHB-16-like OS=Momordica charantia OX=3673 GN=LOC111023462 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.4e-68
Identity = 151/224 (67.41%), Postives = 169/224 (75.45%), Query Frame = 0


Query: 1   MKRFAHSEFFASFI---SSNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGATA-AA 60
           MKRF HSE   SFI   S  +Q SST    GGYSKEFQAML+SLEEE+   DGG    A 
Sbjct: 1   MKRFGHSESLDSFISIFSPKEQPSSTT--AGGYSKEFQAMLDSLEEEENSEDGGGGGPAP 60

Query: 61  VRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQLE 120
            RKRRLR+DQVK LE+HFEVENKLEP+RK+KIAA+LELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLRLDQVKALERHFEVENKLEPDRKLKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 RDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDGNSI---LEISGKD----- 180
           RDYGVLK+NYDALKLDYDVLEKQN+SLASK+RELREKVS++   +    E +  D     
Sbjct: 121 RDYGVLKVNYDALKLDYDVLEKQNTSLASKLRELREKVSRESEEMKIQREFTAIDNCSAT 180

Query: 181 -------YENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
                    NQ  F K  +E+QSLF+ EE CNFCSVDQAPSLHW
Sbjct: 181 SMMNCFEISNQREFMKATNEEQSLFNAEETCNFCSVDQAPSLHW 222

[Close]

BLAST of Sed0014930 vs. ExPASy TrEMBL
Match: A0A5A7TAR1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002330 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.6e-64
Identity = 145/222 (65.32%), Postives = 168/222 (75.68%), Query Frame = 0


Query: 1   MKRFAHSEFFASFIS--SNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGAT--AAA 60
           MKRF+HS+   SFIS  S       +   GGYSKEFQAML+SLEEED   DGG++  +A 
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  VRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQLE 120
            RKRRL++DQVKGLE+HFEVENKLEP+RKMKIAA+LELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 RDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKV-------------SKDGNSILE 180
           +DYGVLKLNYDALKLDYDVLEK+N+SLASKV+ELREKV             ++DGN+   
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDSNRDGNNSYI 180

Query: 181 ISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
              K+  NQ  F K ++EDQSL       NFCSVDQAPSLH+
Sbjct: 181 SMLKNNNNQIQFTKAMNEDQSL------VNFCSVDQAPSLHY 216

[Close]

BLAST of Sed0014930 vs. ExPASy TrEMBL
Match: A0A5D3E5X1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006000 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 2.1e-64
Identity = 145/223 (65.02%), Postives = 168/223 (75.34%), Query Frame = 0


Query: 1   MKRFAHSEFFASFIS--SNDQSSSTANGGGGYSKEFQAMLNSLEEEDGRADGGAT--AAA 60
           MKRF+HS+   SFIS  S       +   GGYSKEFQAML+SLEEED   DGG++  +A 
Sbjct: 1   MKRFSHSDSLDSFISFFSPKDQQPNSKAIGGYSKEFQAMLDSLEEEDNSEDGGSSGGSAP 60

Query: 61  VRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQLE 120
            RKRRL++DQVKGLE+HFEVENKLEP+RKMKIAA+LELEPRQVTIWFQNRRARWKTKQLE
Sbjct: 61  ERKRRLKLDQVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLE 120

Query: 121 RDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKV--------------SKDGNSIL 180
           +DYGVLKLNYDALKLDYDVLEK+N+SLASKV+ELREKV              ++DGN+  
Sbjct: 121 KDYGVLKLNYDALKLDYDVLEKENASLASKVKELREKVNRAMKKGSMERDDSNRDGNNSY 180

Query: 181 EISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSLHW 206
               K+  NQ  F K ++EDQSL       NFCSVDQAPSLH+
Sbjct: 181 ISMLKNNNNQIQFTKAMNEDQSL------VNFCSVDQAPSLHY 217

[Close]

BLAST of Sed0014930 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-37
Identity = 85/181 (46.96%), Postives = 117/181 (64.64%), Query Frame = 0


Query: 25  NGGGGYSKEFQAMLNSLEEED-GRADGGATAAAVRKRRLRVDQVKGLEKHFEVENKLEPE 84
           +G G YS+ F A+ +    ED G     ++ AA +KRRL V+QVK LEK+FE++NKLEPE
Sbjct: 38  SGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPE 97

Query: 85  RKMKIAADLELEPRQVTIWFQNRRARWKTKQLERDYGVLKLNYDALKLDYDVLEKQNSSL 144
           RK+K+A +L L+PRQV IWFQNRRARWKTKQLERDYGVLK N+DALK + D L++ N SL
Sbjct: 98  RKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSL 157

Query: 145 ASKVRELREKVSKDGNSILEISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSL 204
             +++EL+ K++ +G   +E +G          K +  +QS+    E         +P  
Sbjct: 158 LGQIKELKAKLNVEGVKGIEENGA--------LKAVEANQSVMANNEVLELSHRSPSPPP 210

[Close]

BLAST of Sed0014930 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-37
Identity = 85/181 (46.96%), Postives = 117/181 (64.64%), Query Frame = 0


Query: 25  NGGGGYSKEFQAMLNSLEEED-GRADGGATAAAVRKRRLRVDQVKGLEKHFEVENKLEPE 84
           +G G YS+ F A+ +    ED G     ++ AA +KRRL V+QVK LEK+FE++NKLEPE
Sbjct: 20  SGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPE 79

Query: 85  RKMKIAADLELEPRQVTIWFQNRRARWKTKQLERDYGVLKLNYDALKLDYDVLEKQNSSL 144
           RK+K+A +L L+PRQV IWFQNRRARWKTKQLERDYGVLK N+DALK + D L++ N SL
Sbjct: 80  RKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSL 139

Query: 145 ASKVRELREKVSKDGNSILEISGKDYENQSVFRKVIHEDQSLFDTEEPCNFCSVDQAPSL 204
             +++EL+ K++ +G   +E +G          K +  +QS+    E         +P  
Sbjct: 140 LGQIKELKAKLNVEGVKGIEENGA--------LKAVEANQSVMANNEVLELSHRSPSPPP 192

[Close]

BLAST of Sed0014930 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 144.8 bits (364), Expect = 7.5e-35
Identity = 81/165 (49.09%), Postives = 111/165 (67.27%), Query Frame = 0


Query: 1   MKRFAHSEFFASFIS-----SNDQSSSTANGGGGYSKEFQAMLNSLEEEDGR--ADGGAT 60
           MKR + S+     IS     S D+ S    GG    +EFQ+ML   EEE+     + G  
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSPRRYGG----REFQSMLEGYEEEEEAIVEERGHV 61

Query: 61  AAAVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTK 120
             + +KRRL ++QVK LEK+FE+ENKLEPERK+K+A +L L+PRQV +WFQNRRARWKTK
Sbjct: 62  GLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 121

Query: 121 QLERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVSKDG 159
           QLE+DYGVLK  YD+L+ ++D L + N SL  ++ +L+ K++  G
Sbjct: 122 QLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGG 162

[Close]

BLAST of Sed0014930 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 82/192 (42.71%), Postives = 120/192 (62.50%), Query Frame = 0


Query: 1   MKRFAHSEFFASFISSNDQSSSTANGGGGYSKEFQAMLNSLEE-----EDGRADGGATAA 60
           MKR + S+     IS++    S      GY   +Q+ML   +E     E+   +      
Sbjct: 1   MKRLSSSDSMCGLISTSTDEQSPR----GYGSNYQSMLEGYDEDATLIEEYSGNHHHMGL 60

Query: 61  AVRKRRLRVDQVKGLEKHFEVENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQL 120
           + +KRRL+VDQVK LEK+FE+ENKLEPERK K+A +L L+PRQV +WFQNRRARWKTKQL
Sbjct: 61  SEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQL 120

Query: 121 ERDYGVLKLNYDALKLDYDVLEKQNSSLASKVRELREKVS--KDGNSILEISGKDYENQS 180
           E+DYGVLK  YD+L+ ++D L + N SL  ++ +++ KV+  +D N+   I+      + 
Sbjct: 121 EKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAIT------EG 180

Query: 181 VFRKVIHEDQSL 186
           V  + +H+  S+
Sbjct: 181 VKEEEVHKTDSI 182

[Close]

BLAST of Sed0014930 vs. TAIR 10
Match: AT3G01220.1 (homeobox protein 20 )

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-27
Identity = 68/155 (43.87%), Postives = 94/155 (60.65%), Query Frame = 0


Query: 25  NGGGGYSKEFQAML--------NSLEEEDGRADGGATAAAVRKRRLRVDQVKGLEKHFEV 84
           NGGG Y       L         +L+EE+   DG  T    +K+RL+++QVK LEK FE+
Sbjct: 46  NGGGNYMMNRSMSLMNVQEDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFEL 105

Query: 85  ENKLEPERKMKIAADLELEPRQVTIWFQNRRARWKTKQLERDYGVLKLNYDALKLDYDVL 144
            NKLEPERK+++A  L ++PRQ+ IWFQNRRARWKT+QLERDY  LK  +++LK D   L
Sbjct: 106 GNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASL 165

Query: 145 EKQNSSLASKVRELREKVSKDGNSILEISGKDYEN 172
              N  L ++V  L+ K   +GN +   +   + N
Sbjct: 166 LAYNKKLLAEVMALKNKECNEGNIVKREAEASWSN 200

The following BLAST results are available for this feature:

BLAST of Sed0014930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896275.1	7.2e-72	66.39	homeobox-leucine zipper protein ATHB-6-like isoform X2 [Benincasa hispida]	[more]
XP_023524359.1	6.1e-71	66.39	homeobox-leucine zipper protein ATHB-5-like [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022940501.1	1.4e-70	65.13	homeobox-leucine zipper protein ATHB-5-like [Cucurbita moschata]	[more]
KAG6608262.1	1.4e-70	65.13	Homeobox-leucine zipper protein ATHB-5, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022982007.1	2.3e-70	65.97	homeobox-leucine zipper protein ATHB-5-like [Cucurbita maxima]	[more]

BLAST of Sed0014930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46667	1.1e-35	46.96	Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5...	[more]
P46668	1.1e-33	49.09	Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6...	[more]
Q940J1	2.0e-32	42.71	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9XH37	5.4e-30	49.32	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q6K498	5.4e-30	49.32	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Sed0014930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIN2	6.6e-71	65.13	homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IVI4	1.1e-70	65.97	homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1DSK6	1.4e-68	67.41	homeobox-leucine zipper protein ATHB-16-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A5A7TAR1	1.6e-64	65.32	Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3E5X1	2.1e-64	65.02	Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Sed0014930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65310.1	8.1e-37	46.96	homeobox protein 5	[more]
AT5G65310.2	8.1e-37	46.96	homeobox protein 5	[more]
AT2G22430.1	7.5e-35	49.09	homeobox protein 6	[more]
AT4G40060.1	1.4e-33	42.71	homeobox protein 16	[more]
AT3G01220.1	1.5e-27	43.87	homeobox protein 20	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..153
None	No IPR available	GENE3D	1.10.10.60		coord: 45..117 e-value: 3.3E-17 score: 63.9
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 10..163
None	No IPR available	PANTHER	PTHR24326:SF535	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6	coord: 10..163
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 56..117 e-value: 2.9E-14 score: 63.4
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 60..111 e-value: 1.5E-15 score: 56.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 53..113 score: 15.72606
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 58..114 e-value: 1.11324E-13 score: 61.1052
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 113..154 e-value: 4.0E-16 score: 58.9
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 88..111
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 58..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014930.1	Sed0014930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding