![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0014831 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAGCAGCTCTTTTTTTTCGCGTCCACGAAGGGGTTTAAGCCAAGCGGCACTGTTCTTGATCCCTCTCTCTTTCTCTATCGCCTTTACTAATTCGATTCTCACTTTTTTTTCCTTGTTCCATCTTCTTCTCAGAGCTATGCCAGCCAAGGAAAGATTCCAAGGTATTCCATTTTTTCCTTCTGATTCGTTTCTCTTACTAACTGGGTTATTTGAATTGCAGTATCGATGGTGTTTCAGTTGGATTTATCTACAAACTTGGCTGTTTTTTAGGTTATTTCCGAATATTTTTTTATGATTTTAGAGGGGGAAATCGAGCTCCGAATCCGACAAATGAGTATTTTGAGATAATTCATTAACAGGGATGAGAAAAAAAGATCTTTATACTGTTGTACTGTTGTTTGTTTTTTTGACTGTATGTTCTAACTTAGTTTATTAGCTTCCTTGTTTTTGAAGTGTTTGATGCCATTGTGCCAATGTTTTTCATTCAATTTATTAGTGTTCTTGTTTTCATCTGCAACCCAGCTATTGTCTTTTTTTTTTTGTTATATACTGTCCGGGACAGTTCGGGCACACCCCGACTAATGTGAAGGGATATACCGTCTAACTAGGTAGGTTCAACATTTGGATGCCAAAGAAATCGGTCCTAAACTAGTACCTAGGTTGGAGGTGGTAGTGCGATTGATCCATTCACCTCTTTAAGTCCCTGACACCCTTTTGACCACTAGGCTACTCTCTGGTTTAGGGCCCTATACCCCATATTATTAGTTATAGGTTTCTTGTGAATAATTGTTTATTATTGTATTTCGTTAGCTTGAGACTAATTTTTCTCTGGTGCTCATTTTTCTCATTCTTTGATGCATGTCAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCCCAAAAAGTGGGACTTCCTACACCTGTTTACGAAACTATCAAAGAAGGTCCATCACATGAGCCAACATTTCATTCTACCGTCATCGTTAAGGATGTTAGATATGATTCTTTACCTGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAGCTGTCGAAATCGAGTGATCTTAATCCTCATGTCTCCGTACCTGTGGTAAGATTCACATCCTTCACCCCACTTATGACATTTTCTTTAAATGTGTTCCTTGACCATCAATTACTTAATGATCCTCCGCAAATCTTAGTTTTTTATATTTGTTAACCTCTCAATAACCAAATATTGAAGTCCATTGTTTGTCCTCCTGATGAATTGTTGGATGATTGTTTTATCTAAAGTTTTACTGCCATAAATCGAGGAACAAGAGGGGCTTTGAGAACCTAAGCCATGTTGGCCACCTACCTAGGAGTTAATTTTATACAAGTTTTCTGTTGTAGGATTAGGTGGTTTGTCATATGAGAATAGTTGAAGAGTGTGTAAGCTGGTCTGAATACTCACAAATGTAAAAAAAATCGAGGGACAATTTGATATTTGTTTATTCTAAAAGCGTTTTAGTATGTTTTCCCCAAGGGGCAGTCTCGTTGGTAGAGACTTGGGGTGTCCAAGGTATGCTCTCATTTAGGTTCTATGTTCGAAATCCATGAGTGAACTTGGTCATTCATTACCTAGAATATCAAATATAAACAGTTTTTTTTTTCTATCCACTAGTGTCTGGATAGTTTATGTGCACCTTAACTATTCTCAGTTGTTCCGGCCCTGTACTACCCATAGTTGTCAAGAAAATTCGTAGGAAAAATTTTCAAGTAGGTGATCACTTAGGATTGGACCAATTCCGTCCCATTATGAACTTATATTTAAATTATAGAACATCATATAGAAAAAAATCCAATTCCTTTAGGAAAAAAACATTGGGTGGGAAGAGAGCAGACCTGACCAAATTTCATGGGTCTTCTGGGAGTGCTCTATCTAGCCATTTATATTTATGTATAGTTGTATTTTTTTTATGTAAATACCGTAAAGTGGTTAAATATTCTTTTCTTTTGAACTTTTCAATATATCAATGAGAAGTCTCTTAAAACAAAGAAATAGGAAAAAAGAAAGATTCGATTAAGAAAAAGTTATTTAAGGGATCTTAGTTAATCATATTTTCAATCAAATTGTTTCTTCTTCAAAAAAGGAGGAAAAAGAAAAAAAGGGATCTAAGTTGATTATGAAGGGTGCTTTAACTGAAAAGTGGAGTATAAGGGCCTTAACTTTGACAAATAGTTGACGTGGGGGAATATGTGTGGCCCTTGTGCTCTTTAACTTCTCTGGGTATCTATGCATTGTTTATGCTTTGAATCCTTTACTATAAGACTTCAATGTCTATATTATACTAACGGTATATCCTCGATGCTGAAATTTGTTTTGCGGGAATTAGCTGGTCTGGTCTTCGGTTGTATCCTCTACCTATCTGCGCGATAAAGCCTATTCTTTGTAGCCTCACTTAGCAGAAGTACTCCCATTTGTTTGGGTGATAGTATCCCAAGTAGTTCATATTTTGTAACAAAGGAGAAAACTTCAAATTTATGTACAGACTCACACTTTATTAGGAAATGGACCTAAAAATTTTGGGCCTACAAATCAGATTTCAACCTTCTGTACCCTTCAGCTTTTAGGGAGGTTGGAAGTAAAAAAGAGGATTATGCTTTCTCTGCAAGTCTTGCTTCTTTATTAAAGTAAATTAAATTAATTTTGTTGTGCCAACTTTATTTTTTTCCAGCATGAAACAGGACTGTGCAAAAATATGCTTCAGGAGTATGCACAGAAGATGAACTATGCAATTCCACTTTATCAGTTTAAAAAAGATGGACCAGGCAAAGGACACCTTTTCTCATGCACAGTAGAAATTGGAGGGATTCGCTACATAGGTGCAGTAGCAAAAACAAAGAAAGAGGCAGAAATCAAAGCTGCAAGAACTGCTTTGTTAGCAATTCAGTCTTGCCCGACTTCTTTGTCCAAGAAATCTGTCGATCGAGCTCAGCTCACCGTGATCCCATGCAAGAGAAATGACGTAGATTGCTCACTTAAACCAAAGACTACTGCTAAAGCACTCAAAACAAAGAGAGGGCGATTTAAAAGGGATTCAAGGAAAAGAGGCCTAGTTAATGAAGAACACAGATTCACTAGCAATCTGGAGTTAAACATTGATGGATTGAACATGGAACCTTTAGCAACCGAGGTTGTTCCAATGCCATCTGCTGAATTAGTCAGGGATACAATGCAAAATTTTGAATGTAGAACGACAAACCAAAGCTCGAGCGACGATGACCATCTGGTCTCTAACATCCAAAGCGAGTCTCCGCTCGGTAATTTCGATCTCTGTTCCAATCAAATAAACTGTGCAATCTCCGATGCAATGAGTTTTCCTCTCTCTGATGTTCAACCTACATGTGATGAAGCTCGGAATATGACTAATGGAGTAACAGAGGAGCTTCAATAATCAGTAATTTCTTTCTCCTTGAGGGGCTCATGTTTAGAGGATTAAACTGTGAAATCTATGGATTACAATTTACTTGGTTCTGCCGCCAGAGATAAGTAGTAAATAACGGATTATTAGAGATTAGCTTTATTGAAAAGCATGGAGGTTGAGTTTATTGGAATGAAGATCTGGGACCAGCCATTTTAAGTGCCAAAAACAATCCAAGAGAAGTTAGCGTTTATTTACGAAAATGCTAAAAATATTAGTTTGATGAAGAAACATTATTGTATGATCAAGAGAGTTGTGAGCTTATTAGCTTTTTAGTTGAAGTCAGTGCTTTGATATAGTCTTTTTTTAGGGTTTAGGGTTAAAAAAGTGCTTTGATATTGTCTTGGCTGTACCTGCAGTTTCCTAATATTTATCCTTATACCTTTTAACACCCTACAGAGTGGTAATTATCTGAAAACTATTTTCTTCAGTGTTTAGGTGAAAATTATTTC AAAATAGCAGCTCTTTTTTTTCGCGTCCACGAAGGGGTTTAAGCCAAGCGGCACTGTTCTTGATCCCTCTCTCTTTCTCTATCGCCTTTACTAATTCGATTCTCACTTTTTTTTCCTTGTTCCATCTTCTTCTCAGAGCTATGCCAGCCAAGGAAAGATTCCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCCCAAAAAGTGGGACTTCCTACACCTGTTTACGAAACTATCAAAGAAGGTCCATCACATGAGCCAACATTTCATTCTACCGTCATCGTTAAGGATGTTAGATATGATTCTTTACCTGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAGCTGTCGAAATCGAGTGATCTTAATCCTCATGTCTCCGTACCTGTGCATGAAACAGGACTGTGCAAAAATATGCTTCAGGAGTATGCACAGAAGATGAACTATGCAATTCCACTTTATCAGTTTAAAAAAGATGGACCAGGCAAAGGACACCTTTTCTCATGCACAGTAGAAATTGGAGGGATTCGCTACATAGGTGCAGTAGCAAAAACAAAGAAAGAGGCAGAAATCAAAGCTGCAAGAACTGCTTTGTTAGCAATTCAGTCTTGCCCGACTTCTTTGTCCAAGAAATCTGTCGATCGAGCTCAGCTCACCGTGATCCCATGCAAGAGAAATGACGTAGATTGCTCACTTAAACCAAAGACTACTGCTAAAGCACTCAAAACAAAGAGAGGGCGATTTAAAAGGGATTCAAGGAAAAGAGGCCTAGTTAATGAAGAACACAGATTCACTAGCAATCTGGAGTTAAACATTGATGGATTGAACATGGAACCTTTAGCAACCGAGGTTGTTCCAATGCCATCTGCTGAATTAGTCAGGGATACAATGCAAAATTTTGAATGTAGAACGACAAACCAAAGCTCGAGCGACGATGACCATCTGGTCTCTAACATCCAAAGCGAGTCTCCGCTCGGTAATTTCGATCTCTGTTCCAATCAAATAAACTGTGCAATCTCCGATGCAATGAGTTTTCCTCTCTCTGATGTTCAACCTACATGTGATGAAGCTCGGAATATGACTAATGGAGTAACAGAGGAGCTTCAATAATCAGTAATTTCTTTCTCCTTGAGGGGCTCATGTTTAGAGGATTAAACTGTGAAATCTATGGATTACAATTTACTTGGTTCTGCCGCCAGAGATAAGTAGTAAATAACGGATTATTAGAGATTAGCTTTATTGAAAAGCATGGAGGTTGAGTTTATTGGAATGAAGATCTGGGACCAGCCATTTTAAGTGCCAAAAACAATCCAAGAGAAGTTAGCGTTTATTTACGAAAATGCTAAAAATATTAGTTTGATGAAGAAACATTATTGTATGATCAAGAGAGTTGTGAGCTTATTAGCTTTTTAGTTGAAGTCAGTGCTTTGATATAGTCTTTTTTTAGGGTTTAGGGTTAAAAAAGTGCTTTGATATTGTCTTGGCTGTACCTGCAGTTTCCTAATATTTATCCTTATACCTTTTAACACCCTACAGAGTGGTAATTATCTGAAAACTATTTTCTTCAGTGTTTAGGTGAAAATTATTTC ATGCCAGCCAAGGAAAGATTCCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGTCGACTGCAGGAATATGCCCAAAAAGTGGGACTTCCTACACCTGTTTACGAAACTATCAAAGAAGGTCCATCACATGAGCCAACATTTCATTCTACCGTCATCGTTAAGGATGTTAGATATGATTCTTTACCTGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAGCTGTCGAAATCGAGTGATCTTAATCCTCATGTCTCCGTACCTGTGCATGAAACAGGACTGTGCAAAAATATGCTTCAGGAGTATGCACAGAAGATGAACTATGCAATTCCACTTTATCAGTTTAAAAAAGATGGACCAGGCAAAGGACACCTTTTCTCATGCACAGTAGAAATTGGAGGGATTCGCTACATAGGTGCAGTAGCAAAAACAAAGAAAGAGGCAGAAATCAAAGCTGCAAGAACTGCTTTGTTAGCAATTCAGTCTTGCCCGACTTCTTTGTCCAAGAAATCTGTCGATCGAGCTCAGCTCACCGTGATCCCATGCAAGAGAAATGACGTAGATTGCTCACTTAAACCAAAGACTACTGCTAAAGCACTCAAAACAAAGAGAGGGCGATTTAAAAGGGATTCAAGGAAAAGAGGCCTAGTTAATGAAGAACACAGATTCACTAGCAATCTGGAGTTAAACATTGATGGATTGAACATGGAACCTTTAGCAACCGAGGTTGTTCCAATGCCATCTGCTGAATTAGTCAGGGATACAATGCAAAATTTTGAATGTAGAACGACAAACCAAAGCTCGAGCGACGATGACCATCTGGTCTCTAACATCCAAAGCGAGTCTCCGCTCGGTAATTTCGATCTCTGTTCCAATCAAATAAACTGTGCAATCTCCGATGCAATGAGTTTTCCTCTCTCTGATGTTCAACCTACATGTGATGAAGCTCGGAATATGACTAATGGAGTAACAGAGGAGCTTCAATAA MPAKERFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVKDVRYDSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSVPVHETGLCKNMLQEYAQKMNYAIPLYQFKKDGPGKGHLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPTSLSKKSVDRAQLTVIPCKRNDVDCSLKPKTTAKALKTKRGRFKRDSRKRGLVNEEHRFTSNLELNIDGLNMEPLATEVVPMPSAELVRDTMQNFECRTTNQSSSDDDHLVSNIQSESPLGNFDLCSNQINCAISDAMSFPLSDVQPTCDEARNMTNGVTEELQ Homology
BLAST of Sed0014831 vs. NCBI nr
Match: KAA0065099.1 (double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 451.8 bits (1161), Expect = 5.1e-123 Identity = 253/352 (71.88%), Postives = 279/352 (79.26%), Query Frame = 0
BLAST of Sed0014831 vs. NCBI nr
Match: XP_011649689.1 (double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 449.9 bits (1156), Expect = 1.9e-122 Identity = 249/356 (69.94%), Postives = 281/356 (78.93%), Query Frame = 0
BLAST of Sed0014831 vs. NCBI nr
Match: XP_008444916.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 445.3 bits (1144), Expect = 4.7e-121 Identity = 252/352 (71.59%), Postives = 279/352 (79.26%), Query Frame = 0
BLAST of Sed0014831 vs. NCBI nr
Match: XP_022962385.1 (double-stranded RNA-binding protein 1-like [Cucurbita moschata]) HSP 1 Score: 442.2 bits (1136), Expect = 4.0e-120 Identity = 250/351 (71.23%), Postives = 278/351 (79.20%), Query Frame = 0
BLAST of Sed0014831 vs. NCBI nr
Match: KAG7029667.1 (Double-stranded RNA-binding protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 441.8 bits (1135), Expect = 5.2e-120 Identity = 250/351 (71.23%), Postives = 278/351 (79.20%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy Swiss-Prot
Match: O04492 (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.1e-67 Identity = 137/221 (61.99%), Postives = 169/221 (76.47%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy Swiss-Prot
Match: Q0IQN6 (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.8e-60 Identity = 133/219 (60.73%), Postives = 154/219 (70.32%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy Swiss-Prot
Match: Q0DJA3 (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 8.3e-60 Identity = 133/219 (60.73%), Postives = 154/219 (70.32%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy Swiss-Prot
Match: Q0IV63 (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 8.3e-60 Identity = 133/219 (60.73%), Postives = 153/219 (69.86%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.1e-23 Identity = 61/157 (38.85%), Postives = 90/157 (57.32%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy TrEMBL
Match: A0A5A7VI00 (Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004330 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 2.4e-123 Identity = 253/352 (71.88%), Postives = 279/352 (79.26%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy TrEMBL
Match: A0A0A0LRU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370450 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 9.3e-123 Identity = 249/356 (69.94%), Postives = 281/356 (78.93%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy TrEMBL
Match: A0A1S3BBH0 (double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488118 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 2.3e-121 Identity = 252/352 (71.59%), Postives = 279/352 (79.26%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy TrEMBL
Match: A0A6J1HEW7 (double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462846 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.9e-120 Identity = 250/351 (71.23%), Postives = 278/351 (79.20%), Query Frame = 0
BLAST of Sed0014831 vs. ExPASy TrEMBL
Match: A0A6J1K8Y3 (double-stranded RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492178 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 1.2e-117 Identity = 246/351 (70.09%), Postives = 275/351 (78.35%), Query Frame = 0
BLAST of Sed0014831 vs. TAIR 10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein ) HSP 1 Score: 258.5 bits (659), Expect = 7.6e-69 Identity = 137/221 (61.99%), Postives = 169/221 (76.47%), Query Frame = 0
BLAST of Sed0014831 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 ) HSP 1 Score: 107.1 bits (266), Expect = 2.8e-23 Identity = 61/157 (38.85%), Postives = 87/157 (55.41%), Query Frame = 0
BLAST of Sed0014831 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 ) HSP 1 Score: 107.1 bits (266), Expect = 2.8e-23 Identity = 61/157 (38.85%), Postives = 87/157 (55.41%), Query Frame = 0
BLAST of Sed0014831 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 ) HSP 1 Score: 99.8 bits (247), Expect = 4.5e-21 Identity = 64/178 (35.96%), Postives = 96/178 (53.93%), Query Frame = 0
BLAST of Sed0014831 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 ) HSP 1 Score: 94.0 bits (232), Expect = 2.5e-19 Identity = 71/213 (33.33%), Postives = 108/213 (50.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|