Sed0014823 (gene) Chayote v1

Overview


Name	Sed0014823
Type	gene
Organism	Sechium edule (Chayote v1)
Description	C2H2-type domain-containing protein
Location	LG12: 6466782 .. 6468700 (+)
RNA-Seq Expression	Sed0014823
Synteny	Sed0014823

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTATGGAAAACAAGGGAGCTGGGACAGTTCTTGCGACGAATACGAGCCACACGGTCAGCATCGAAAAGATGACGATGACCCGACAAAACGCCCATACGAGTGCACATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCCCTTGGTGGCCACATGAACATTCACCGCAAAGACAGAGCCAAAGCCAAAGGCGCCAAACGCAGCAATTTCATTCATTCCTCTTCTTCCCAAAATTTCCCTCCTGTTTCGACTCAACCGACCGCGGAATCTTACCCGCCGCCTCCGTCGTATCGAATGTACTTCGACACGACGGCGGCTATGGCCGGGAACTTCCCGATTCACGAGCAGCGATCGCAGGACGAGGAGCTTCTCGGGGCGAATCTCAGCCTCCAAATTGATCAAAATGGGGGTGTTTGGAATCATGAAGAAGTCGATTTGGAGCTGCGGTTAGGCCATGAATATCGCTGATTTGTAAGTTTTTGTGTATAAAGGTGGGACAATAAAGGGGATGTGGGAGTTTGATTTTGATGATGACATCAAGTTTTGATTAGCTTTGGCTCTGTGTAATTTTGTTATCTTTCTCAGAGCTAGCTACTGAAAAAACAGAATATTCAGTATTATTATTGTTGCTAAATTATGCCCATTCACATGCTGTTTTTTCACCTTTTTAATTATCAAATTATTGTTTGGTGATGAAATTATAGGAATTGCTAATTGCTTTCGATTGGTTTTGCATTTCTTCATTTTTCATCTTCATACTAATTTGCAGAGGGTTTCTCTGTTTTTTCATCATTTGAGTTGTTTGTCAAATGTTTGTGTTTCTTAGTACAGTTGGCTTTTTTTAAGGCTGTTATAATTTTAAGACAGCAATTTAAGTGATGCTTTTGTATCACTTATAATTTGAATCTATTACTCTATTCACATTTGTTTGTTCTCTAACTCAAAAATAGATAAATAAAATTAGAGAAAAATGAAAATAGCTTAAATTAGGTCACTTCAATGTTAAAATATAACCTAAATTGTTCTATAATTTTTTTTTTGAAAGTAATTCTTCTATAACTTTAATGTTGAATCTGAAGCCTACTTTATTCTTAAGAGAATTATATATCCCAATTTCTTGGGAGTCACGTTGATGTGCCTTAAATAGGAAAGTATTGTATATATTTGTAACTATTGGAATCATTTTGTCAAAATTTCAACTTAGACTATGAAATATACCTTAACTATATAATATTTGGATACAAAAAAAGTTATATATAAATTATAACAAATTAAATTCATTAACTCTTAACTACAAAGGACCTTCTTCATTAATAAATCACTTTATTCAAAAGTTAGAATAGATTTTTCTTAAAATAAATAAAAAAAGAAAAAAGCAAAAAGAAAAAGAGAATGTTTTTTTAGATATAAAAGTTAGAATGTCACATCTATTTATTTTTTGAAAAACGTCACATCAATTAAATATGAATAAATACATTCCATAAAGAAAAAAAATGAATAATCTAAATATTTTAATGAAAAAAACTAGTTTTTTTTTAATATTATTTAGGAGTATTTGTTTCTTAAATTTATGGGGCATATAAAAAATAACTATCTAATATTTGTTTCTTAAATTAATTATTTATTTTTAACTATTCAAAATAATTTTTCATTTTTAATTACACTGAATAACTTTTTATTTTAAATCTACTTCTAAACAAACTATTGTCTCTATCTCCTTTATAATAAAAAAATACATTCAAATAAGTTCTTTGGTTACAATTTCTCCATAAAAATTTATATCAAAACGAACATTACAAAAACCTCTCATTTCTAACTATTTAAAATAAATTTTCATCCAAATACCTTATTAGTTGTTAAAGGGCATGTTTGGATGGGGAAAAGGAGATGGTGGAAAAAATGGAGTGGTTTGGTAG

mRNA sequence

ATGGATTATGGAAAACAAGGGAGCTGGGACAGTTCTTGCGACGAATACGAGCCACACGGTCAGCATCGAAAAGATGACGATGACCCGACAAAACGCCCATACGAGTGCACATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCCCTTGGTGGCCACATGAACATTCACCGCAAAGACAGAGCCAAAGCCAAAGGCGCCAAACGCAGCAATTTCATTCATTCCTCTTCTTCCCAAAATTTCCCTCCTGTTTCGACTCAACCGACCGCGGAATCTTACCCGCCGCCTCCGTCGTATCGAATGTACTTCGACACGACGGCGGCTATGGCCGGGAACTTCCCGATTCACGAGCAGCGATCGCAGGACGAGGAGCTTCTCGGGGCGAATCTCAGCCTCCAAATTGATCAAAATGGGGGAGATGGTGGAAAAAATGGAGTGGTTTGGTAG

Coding sequence (CDS)

ATGGATTATGGAAAACAAGGGAGCTGGGACAGTTCTTGCGACGAATACGAGCCACACGGTCAGCATCGAAAAGATGACGATGACCCGACAAAACGCCCATACGAGTGCACATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCCCTTGGTGGCCACATGAACATTCACCGCAAAGACAGAGCCAAAGCCAAAGGCGCCAAACGCAGCAATTTCATTCATTCCTCTTCTTCCCAAAATTTCCCTCCTGTTTCGACTCAACCGACCGCGGAATCTTACCCGCCGCCTCCGTCGTATCGAATGTACTTCGACACGACGGCGGCTATGGCCGGGAACTTCCCGATTCACGAGCAGCGATCGCAGGACGAGGAGCTTCTCGGGGCGAATCTCAGCCTCCAAATTGATCAAAATGGGGGAGATGGTGGAAAAAATGGAGTGGTTTGGTAG

Protein sequence

MDYGKQGSWDSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRMYFDTTAAMAGNFPIHEQRSQDEELLGANLSLQIDQNGGDGGKNGVVW

Homology

[Close]

BLAST of Sed0014823 vs. NCBI nr
Match: XP_038877191.1 (zinc finger protein 7-like [Benincasa hispida])

HSP 1 Score: 194.9 bits (494), Expect = 4.9e-46
Identity = 111/153 (72.55%), Postives = 116/153 (75.82%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEPHGQHR-KDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MD+GKQGSWDSS DEYEP   H  KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHHLKDDDTENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKGAKRSNFIHSSSS-------QNFPPVSTQPTAESYPPPPSYRMYFDTTAAMA 120
           RKDRAK   AK  NFIHSSSS       Q FPP+ TQPT   YPPPPSYRMYFDT AA  
Sbjct: 61  RKDRAK---AKHRNFIHSSSSSHSHSNDQFFPPIPTQPTPSYYPPPPSYRMYFDTAAA-- 120

Query: 121 GNFPIHEQ-RSQ---DEELLGANLSLQIDQNGG 139
            NFPIH Q RS    +++LLGANLSLQIDQN G
Sbjct: 121 -NFPIHPQIRSPTVVNQQLLGANLSLQIDQNRG 147

[Close]

BLAST of Sed0014823 vs. NCBI nr
Match: XP_008439363.1 (PREDICTED: zinc finger protein 7 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 6.0e-44
Identity = 111/157 (70.70%), Postives = 116/157 (73.89%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEP--HGQHRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNI 60
           MD+GKQGSWDSS DEYEP  H  H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNI
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHIHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNI 60

Query: 61  HRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTAESY---PPPPSYRMYFDTT 120
           HRKDRAK   AK  NFIHSSSS      Q FPP + TQPT  SY   PPPPSYRMYFDT 
Sbjct: 61  HRKDRAK---AKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYHHPPPPSYRMYFDTA 120

Query: 121 AAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGG 139
           A    NFPIH Q +     ++ELLGANLSLQIDQN G
Sbjct: 121 AT---NFPIHPQITSPAVVNQELLGANLSLQIDQNRG 151

[Close]

BLAST of Sed0014823 vs. NCBI nr
Match: XP_022151484.1 (zinc finger protein 8-like [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-42
Identity = 104/151 (68.87%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEPHGQHRKDD-DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60
           MD+GKQGSWDSS DEY P  Q  KD+ DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD
Sbjct: 1   MDFGKQGSWDSSSDEYXPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60

Query: 61  RAKAKGAKRSNFIHSSSS----QNFPPVSTQPTAESYPPPP------SYRMYFDTTAAMA 120
           RAK   AK+ N I SSSS    Q FPP+S  P A  YPPPP      +YRMYFDTTA  A
Sbjct: 61  RAK---AKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTA--A 120

Query: 121 GNFPIHEQRSQ--DEELLGANLSLQIDQNGG 139
            N+PIH  RSQ  +E+LLGANL+LQIDQ  G
Sbjct: 121 ANYPIHRHRSQGANEDLLGANLTLQIDQTRG 146

[Close]

BLAST of Sed0014823 vs. NCBI nr
Match: KAE8650335.1 (hypothetical protein Csa_010297 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 4.3e-42
Identity = 109/161 (67.70%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MD+GKQGSWDSS DEYE     H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 90  MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 149

Query: 61  RKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTAESY---PPPPSYRMYFDTTA 120
           RKDRAK   AK  NFIHSSSS      Q FPP + TQPT  SY   PPPPSYRMYFDT A
Sbjct: 150 RKDRAK---AKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTAA 209

Query: 121 AMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGGDGGKN 144
               NFPIH Q +     ++ELLGANLSL+IDQ  G   KN
Sbjct: 210 T---NFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKN 244

[Close]

BLAST of Sed0014823 vs. NCBI nr
Match: XP_004134420.3 (zinc finger protein 10 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 4.3e-42
Identity = 109/161 (67.70%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MD+GKQGSWDSS DEYE     H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTAESY---PPPPSYRMYFDTTA 120
           RKDRAK   AK  NFIHSSSS      Q FPP + TQPT  SY   PPPPSYRMYFDT A
Sbjct: 61  RKDRAK---AKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTAA 120

Query: 121 AMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGGDGGKN 144
               NFPIH Q +     ++ELLGANLSL+IDQ  G   KN
Sbjct: 121 T---NFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKN 155

[Close]

BLAST of Sed0014823 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 29/55 (52.73%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 10 DSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK 65
          D   D    +     DD     R Y C+FC RGF+NAQALGGHMNIHR+DRAK +
Sbjct: 11 DDCSDSISKNSHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

[Close]

BLAST of Sed0014823 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 32  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFP-PVSTQPTAE 91
           R Y C+FCKR F +AQALGGHMN+HR+DRA+ +  ++S    S+ S  +P P  +  T  
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR-LQQSPSSSSTPSPPYPNPNYSYSTMA 104

Query: 92  SYPPP 96
           + PPP
Sbjct: 105 NSPPP 108

[Close]

BLAST of Sed0014823 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 32  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPP 83
           R Y C+FC R F +AQALGGHMN+HR+DRA+    K+ +   SS+ Q  PP
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRAR---LKQQSLSPSSTDQATPP 100

[Close]

BLAST of Sed0014823 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 32  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFPPVSTQPTAES 91
           R Y C+FC+R F +AQALGGHMN+HR+DRA+ K A        SSS   P   +   +++
Sbjct: 37  RSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPKSSSS--PEYPSHKDSDN 96

Query: 92  YPPPPSYRMYFDT 105
                 Y + F+T
Sbjct: 97  IHETSCYTLVFNT 107

[Close]

BLAST of Sed0014823 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.1e-06
Identity = 34/96 (35.42%), Postives = 47/96 (48.96%), Query Frame = 0


Query: 34  YECTFCKRGFTNAQALGGHMNIHRKDRAKAK---------------GAKRSNFIHSSSSQ 93
           Y C+FC+R F +AQALGGHMN+HR+DRAK +                    NF  SSSS 
Sbjct: 49  YTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSSSSSSS 108

Query: 94  ----NFPPVSTQPTAESYPPPPSYRMYFDTTAAMAG 111
               +  P  T   +++ P P +     D+T +  G
Sbjct: 109 TTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGG 144

[Close]

BLAST of Sed0014823 vs. ExPASy TrEMBL
Match: A0A1S3AZA2 (zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.9e-44
Identity = 111/157 (70.70%), Postives = 116/157 (73.89%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEP--HGQHRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNI 60
           MD+GKQGSWDSS DEYEP  H  H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNI
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHIHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNI 60

Query: 61  HRKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTAESY---PPPPSYRMYFDTT 120
           HRKDRAK   AK  NFIHSSSS      Q FPP + TQPT  SY   PPPPSYRMYFDT 
Sbjct: 61  HRKDRAK---AKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYHHPPPPSYRMYFDTA 120

Query: 121 AAMAGNFPIHEQRSQ----DEELLGANLSLQIDQNGG 139
           A    NFPIH Q +     ++ELLGANLSLQIDQN G
Sbjct: 121 AT---NFPIHPQITSPAVVNQELLGANLSLQIDQNRG 151

[Close]

BLAST of Sed0014823 vs. ExPASy TrEMBL
Match: A0A6J1DD81 (zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 7.1e-43
Identity = 104/151 (68.87%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEPHGQHRKDD-DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60
           MD+GKQGSWDSS DEY P  Q  KD+ DDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD
Sbjct: 1   MDFGKQGSWDSSSDEYXPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60

Query: 61  RAKAKGAKRSNFIHSSSS----QNFPPVSTQPTAESYPPPP------SYRMYFDTTAAMA 120
           RAK   AK+ N I SSSS    Q FPP+S  P A  YPPPP      +YRMYFDTTA  A
Sbjct: 61  RAK---AKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDTTA--A 120

Query: 121 GNFPIHEQRSQ--DEELLGANLSLQIDQNGG 139
            N+PIH  RSQ  +E+LLGANL+LQIDQ  G
Sbjct: 121 ANYPIHRHRSQGANEDLLGANLTLQIDQTRG 146

[Close]

BLAST of Sed0014823 vs. ExPASy TrEMBL
Match: A0A0A0L4H6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141860 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.7e-42
Identity = 111/168 (66.07%), Postives = 118/168 (70.24%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEPHGQ-HRKDDD---DPTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MD+GKQGSWDSS DEYE     H KDDD   DPTKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKGAKRSNFIHSSSS------QNFPP-VSTQPTAESY---PPPPSYRMYFDTTA 120
           RKDRAK   AK  NFIHSSSS      Q FPP + TQPT  SY   PPPPSYRMYFDT A
Sbjct: 61  RKDRAK---AKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTAA 120

Query: 121 AMAGNFPIHEQRSQ----DEELLGANLSLQIDQNG----GDGGKNGVV 147
               NFPIH Q +     ++ELLGANLSL+IDQ       DG KNG +
Sbjct: 121 T---NFPIHPQITSPAVVNQELLGANLSLEIDQTRVFVYSDGIKNGAL 162

[Close]

BLAST of Sed0014823 vs. ExPASy TrEMBL
Match: A0A6J1IGJ1 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111474605 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 100/142 (70.42%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDR 60
           MD+GKQG WDS  DEYE H +  + D+D TKRPYECTFCKRGFTNAQALGGHMNIHRKDR
Sbjct: 45  MDFGKQGRWDSWSDEYE-HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDR 104

Query: 61  AKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRMYFDTT-AAMAGNFPIHEQRS 120
           AKAK    S+    S+ Q FP +STQPTA   P PPSYRMYFDTT AAMA NFPIH+QRS
Sbjct: 105 AKAKHRTSSS---HSNHQIFPHLSTQPTA---PLPPSYRMYFDTTAAAMASNFPIHQQRS 164

Query: 121 Q---DEELLGANLSLQIDQNGG 139
           +   +E LLGANLSLQ+DQN G
Sbjct: 165 ESVSEELLLGANLSLQVDQNRG 179

[Close]

BLAST of Sed0014823 vs. ExPASy TrEMBL
Match: A0A6J1GCF2 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111452897 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40
Identity = 101/142 (71.13%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 1   MDYGKQGSWDSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDR 60
           MD+GKQGSWDS  DEYE H +  + D+D TKRPYECTFCKRGFTNAQALGGHMNIHRKDR
Sbjct: 1   MDFGKQGSWDSWSDEYE-HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDR 60

Query: 61  AKAKGAKRSNFIHSSSSQNFPPVSTQPTAESYPPPPSYRMYFDTT-AAMAGNFPIHEQRS 120
           AKAK  +R++  H S+ Q FP +S+QPTA   P PPSYRMYFDTT AAMA N PIH+QRS
Sbjct: 61  AKAK--RRTSSSH-SNHQIFPHLSSQPTA---PLPPSYRMYFDTTAAAMAANSPIHQQRS 120

Query: 121 Q---DEELLGANLSLQIDQNGG 139
           +   +E LLGANLSLQIDQN G
Sbjct: 121 ESVNEELLLGANLSLQIDQNRG 135

[Close]

BLAST of Sed0014823 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 30 TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAK 65
          T+R YECTFCKRGFTNAQALGGHMNIHR+DR  KAK
Sbjct: 31 TRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAK 66

[Close]

BLAST of Sed0014823 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 7.1e-11
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0


Query: 32 RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGA 67
          RPY C FC+RGF+NAQALGGHMNIHRKDRAK + A
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQA 53

[Close]

BLAST of Sed0014823 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 )

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 29/55 (52.73%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 10 DSSCDEYEPHGQHRKDDDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK 65
          D   D    +     DD     R Y C+FC RGF+NAQALGGHMNIHR+DRAK +
Sbjct: 11 DDCSDSISKNSHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

[Close]

BLAST of Sed0014823 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 48/130 (36.92%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 31  KRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHS------------SSSQ 90
           +R Y+C  CKRGFTN QALGGH NIHR++R +   +  S+  HS            SSS 
Sbjct: 18  RRTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSS--HSFPFSLPLPSQSPSSST 77

Query: 91  NFP-PVSTQPTAESY------PP--PPSYRMYFDTTAAMAGNFPIHEQRSQDEELLGANL 140
           NF  P    PT ESY      PP  P     YF ++++  G     +  S D      NL
Sbjct: 78  NFTNPPPYFPTIESYLHQGSQPPINPSHNTQYFGSSSSSRGGGRFAQGASHD-----LNL 137

[Close]

BLAST of Sed0014823 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 32  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKGAKRSNFIHSSSSQNFP-PVSTQPTAE 91
           R Y C+FCKR F +AQALGGHMN+HR+DRA+ +  ++S    S+ S  +P P  +  T  
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR-LQQSPSSSSTPSPPYPNPNYSYSTMA 104

Query: 92  SYPPP 96
           + PPP
Sbjct: 105 NSPPP 108

The following BLAST results are available for this feature:

BLAST of Sed0014823 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877191.1	4.9e-46	72.55	zinc finger protein 7-like [Benincasa hispida]	[more]
XP_008439363.1	6.0e-44	70.70	PREDICTED: zinc finger protein 7 [Cucumis melo]	[more]
XP_022151484.1	1.5e-42	68.87	zinc finger protein 8-like [Momordica charantia]	[more]
KAE8650335.1	4.3e-42	67.70	hypothetical protein Csa_010297 [Cucumis sativus]	[more]
XP_004134420.3	4.3e-42	67.70	zinc finger protein 10 [Cucumis sativus]	[more]

BLAST of Sed0014823 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR34	2.5e-08	52.73	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]
Q38895	2.7e-07	47.69	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9LHS9	4.6e-07	52.94	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
O80942	4.6e-07	41.10	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9SLB8	5.1e-06	35.42	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]

BLAST of Sed0014823 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZA2	2.9e-44	70.70	zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1	[more]
A0A6J1DD81	7.1e-43	68.87	zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 S...	[more]
A0A0A0L4H6	2.7e-42	66.07	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141860 P...	[more]
A0A6J1IGJ1	1.1e-40	70.42	zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111474605 PE=4 SV=...	[more]
A0A6J1GCF2	1.5e-40	71.13	transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Sed0014823 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43540.1	1.1e-11	86.11	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G53820.1	7.1e-11	80.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G09290.1	1.8e-09	52.73	telomerase activator1	[more]
AT3G23140.1	1.5e-08	36.92	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	1.9e-08	47.69	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 34..56 e-value: 0.0097 score: 25.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 36..56
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 34..61 score: 11.468431
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 15..88 e-value: 2.6E-9 score: 38.8
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 34..58 e-value: 2.0E-5 score: 24.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 12..123
None	No IPR available	PANTHER	PTHR45801:SF43	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 12..123
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 31..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014823.1	Sed0014823.1	mRNA