Sed0014795 (gene) Chayote v1

Overview


Name	Sed0014795
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ganglioside-induced differentiation-associated protein 2-like
Location	LG04: 13198184 .. 13200792 (+)
RNA-Seq Expression	Sed0014795
Synteny	Sed0014795

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGGGGATGAAAAGATGCCAACAGAATATTCGAGTGTGACAAAATCTTTGCCCCCACATCCGCGCCATTCATGGTCTCCATTTCCTTGAACCAAAAGAAATAAAAAATACACATTAATCATTATTCTTCTTCTTCTTCTTCTTCTTCCCCTATAATATATAATTTATTTGCCAAATCTCATCGACGAATTCCATCTACACCTAACCCTTCCATCCTTATCCATATCCTTTCTCTCTGTCTCTACTCCACTCTCATCGGAGTTCTTCAACCATGGCCGCTCAGGATCCGCCGGAGCAGAACCAACTCGACAACCTCGACGTCTTCAAGATCAAAGGCCGCGACAAACAGGGCCGCCGGATTCTCCGTATCACCGGAAAGTTCTTCCCAGGTCTCCCATCTCTCTTTTTCTTCTTTTCGTTTATGAAATTGAATCTTCCTCTTCGATTTCGACTCTTGAGTTTGAACGAGGCGTTGCGGTGCTCTGATTCTGTTTTTTCACTGGCGAAATTGAATTTCTCTCATCGAGTTTGAATTGTCTCTATATTTGCCCTAATCTGCTGTGCTTCGATTTTACTGCTTTTTTCGTCCATGAAATTGAAACTGTACGTTTGATTTTCTTGCTGTTTTCATCGATCGATTTCTTCTAGGAGGATCTCGATTCTATTTCGCATCTGAACTATTATGCTGCTATTCTGTTTAAATGGATGAAATCGAATTTTGGTTATGTTGATTATTTGGTGATTCAGCGCGGAGTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTCCCCAGGCTTAAGAACAAGCGTTTCGCGATCTTGTACTTTCACACCGGCGTTCAAAGGAGCCAGAATTTCCCCGGAATCGCCGCCCTTCGATCGATCTACGACGCGATTCCGGCCGCCGTCAAGGCTAATCTCGAAGCACTGTATTTCGTTCATCCGGATCTTCAGGCCAGGCTCTTCCTCGCCACCCTCGGCCGCATTTTCTTCACCAATCAGTTCAGTACTATTTTCTACCCTTTCTCTTTCAATCAATTTCACTTTTCCCCAATTTTATTCCTTTTTCTCTTTTTTTATTTGGCAGAAAATTTTATTCGTTTTCAATTTTCTTGAATATGGTAATCAATTTCAAGGATGGAATGTCCCCACCAATAATTGAACTTAAAAAATCATACAAAATAATTCTCTTAAAATGTTTTTTTGGTAAGTTATAATTTTTTTTAAATAATTTGCTCACTCTAATTTTAGAAATTAAAACTGGAACAACACAGGAAAATAAAAGTATTTTTTTGAAAGCAAAATTCTCCAATAGTAAGCTTTACGAAGCGTACACCTTTAAAATTAGACACGTACGATCAAAATATATTTTAATATATATTATGAAAGCAATTATCTTCATATTTATTTATCAAATATATACATGCAAGGTTGTGTTTACGTCTTGATTTAGCAATCTTAATAATTATCTTTTTTTATATATATAAATAAGTATACTCTAAGTATTTATTTCTTATAATAGAAACAAAAATAAAATTTTAAAAAAACTCATCTGTTTTTAAAGCATAGTAATAGTTAAGGGCGAATGTATGAGTTTAGTCTATTAATTTGTAAATTTATACTATTAGATCGATATTTTTTTTTTTATAAAAAAAAGTAGGAATCATAGCCAGTTATTAAAGAGAATAAAAAATTCCAACCAACTGTTAAACTTAATTAAACAAGAGATCACATAAATCTTTTAGGCTTGGTCTTATGTAGAAGTTTGGTTTTTAATATATTTGTTTCTAATTTAGACCTGAACTTTTTTAGTATTTATTCTACTCTTAATATTTATTTTTTATTTCATAAAAAAAAAAAAAACTAATTTTTTTAAAGATCATCATAAGCTATTTGGTATAATATAAACTCTTAATTTAACTTAATTTGCATTTCTTTTTTAATGTATGTGATAAATTATTTTGTACACCTTGGACTATTTTTATCCACAAAAGAAAAGATAAGATGTTAAAGCAATCAAATTGACATTAAAAAAGTAGGAATAATTGAAGATAATGTTTTCTGTTCTTTTTCTTAATTGAGGGACTGTTTGTTTGAATGTGGTAGGCTGTATGGAAAAGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATTTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGACTTGAGAGTGATCATCCTAGGGTCTACGGGGCGCCCTCGATGGAATCGCACGTGTACTCCATGAGGTGCATTTCTTAGATCTGGCTTTCCATTGGGCCGTGAAATGGGCCTTTTTAAATGTTTGTTTTTTTTTCCCTTTTTGGACACCAAGACCAAGAAGTGCTTGTATATATCTTTGTTTTCTTCTTCTTTTGCATAAAGTGGTTTTTTTTATGTACAACTTCTGATGGTTGGGAGATTCAAACCATCACAGTGTCATTTGAGTTATGCTTTTAATGATAAGTTGTATTAAATCAAATTTTATGCATGTATAACTTGTTAATATATATTTGGTTACGCTTTTCATGTCTTTGTTA

mRNA sequence

TCTGGGGATGAAAAGATGCCAACAGAATATTCGAGTGTGACAAAATCTTTGCCCCCACATCCGCGCCATTCATGGTCTCCATTTCCTTGAACCAAAAGAAATAAAAAATACACATTAATCATTATTCTTCTTCTTCTTCTTCTTCTTCCCCTATAATATATAATTTATTTGCCAAATCTCATCGACGAATTCCATCTACACCTAACCCTTCCATCCTTATCCATATCCTTTCTCTCTGTCTCTACTCCACTCTCATCGGAGTTCTTCAACCATGGCCGCTCAGGATCCGCCGGAGCAGAACCAACTCGACAACCTCGACGTCTTCAAGATCAAAGGCCGCGACAAACAGGGCCGCCGGATTCTCCGTATCACCGGAAAGTTCTTCCCAGCGCGGAGTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTCCCCAGGCTTAAGAACAAGCGTTTCGCGATCTTGTACTTTCACACCGGCGTTCAAAGGAGCCAGAATTTCCCCGGAATCGCCGCCCTTCGATCGATCTACGACGCGATTCCGGCCGCCGTCAAGGCTAATCTCGAAGCACTGTATTTCGTTCATCCGGATCTTCAGGCCAGGCTCTTCCTCGCCACCCTCGGCCGCATTTTCTTCACCAATCAGCTGTATGGAAAAGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATTTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGACTTGAGAGTGATCATCCTAGGGTCTACGGGGCGCCCTCGATGGAATCGCACGTGTACTCCATGAGGTGCATTTCTTAGATCTGGCTTTCCATTGGGCCGTGAAATGGGCCTTTTTAAATGTTTGTTTTTTTTTCCCTTTTTGGACACCAAGACCAAGAAGTGCTTGTATATATCTTTGTTTTCTTCTTCTTTTGCATAAAGTGGTTTTTTTTATGTACAACTTCTGATGGTTGGGAGATTCAAACCATCACAGTGTCATTTGAGTTATGCTTTTAATGATAAGTTGTATTAAATCAAATTTTATGCATGTATAACTTGTTAATATATATTTGGTTACGCTTTTCATGTCTTTGTTA

Coding sequence (CDS)

ATGGCCGCTCAGGATCCGCCGGAGCAGAACCAACTCGACAACCTCGACGTCTTCAAGATCAAAGGCCGCGACAAACAGGGCCGCCGGATTCTCCGTATCACCGGAAAGTTCTTCCCAGCGCGGAGTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTCCCCAGGCTTAAGAACAAGCGTTTCGCGATCTTGTACTTTCACACCGGCGTTCAAAGGAGCCAGAATTTCCCCGGAATCGCCGCCCTTCGATCGATCTACGACGCGATTCCGGCCGCCGTCAAGGCTAATCTCGAAGCACTGTATTTCGTTCATCCGGATCTTCAGGCCAGGCTCTTCCTCGCCACCCTCGGCCGCATTTTCTTCACCAATCAGCTGTATGGAAAAGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAATTCATTTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGACTTGAGAGTGATCATCCTAGGGTCTACGGGGCGCCCTCGATGGAATCGCACGTGTACTCCATGAGGTGCATTTCTTAG

Protein sequence

MAAQDPPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRFAILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFFTNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSMESHVYSMRCIS

Homology

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BLAST of Sed0014795 vs. NCBI nr
Match: XP_022145479.1 (ganglioside-induced differentiation-associated protein 2-like [Momordica charantia])

HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100
Identity = 184/198 (92.93%), Postives = 193/198 (97.47%), Query Frame = 0


Query: 1   MAAQDPPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRL 60
           MAAQ PPEQNQL+ LDVFKIKGRDKQGRRILRITGKFFPARSVSLDV+KK+L+EKI PRL
Sbjct: 1   MAAQVPPEQNQLERLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVLKKNLQEKILPRL 60

Query: 61  KNKRFAILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATL 120
           KNK FAILYFHTGVQRSQNFPGIAALRSIY+AIPAAVKANLEA+YFVHPDLQARLFLATL
Sbjct: 61  KNKPFAILYFHTGVQRSQNFPGIAALRSIYEAIPAAVKANLEAVYFVHPDLQARLFLATL 120

Query: 121 GRIFFTNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPR 180
           GRIFFTN+LYGKVRYVSRIDLLWE VRR+EIE+PEFIYDHDEDLEYRPMMDYGLESDHPR
Sbjct: 121 GRIFFTNELYGKVRYVSRIDLLWEQVRRSEIEIPEFIYDHDEDLEYRPMMDYGLESDHPR 180

Query: 181 VYGAPSMESHVYSMRCIS 199
           VYGAPSMESHVYSMRCIS
Sbjct: 181 VYGAPSMESHVYSMRCIS 198

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BLAST of Sed0014795 vs. NCBI nr
Match: XP_004146166.1 (ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN55625.1 hypothetical protein Csa_010698 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 4.6e-100
Identity = 182/193 (94.30%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 6   PPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRF 65
           PPEQN L+ LDVFKIKGRDKQGRRILRITGKFFPAR VSLDV+KKHLEEKIFPRLKNKRF
Sbjct: 9   PPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRF 68

Query: 66  AILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFF 125
            ILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEA+YFVHPDLQARLFLATLGRIFF
Sbjct: 69  TILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFF 128

Query: 126 TNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 185
           T+++YGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP
Sbjct: 129 TSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 188

Query: 186 SMESHVYSMRCIS 199
           S+ESHVYSMRCIS
Sbjct: 189 SVESHVYSMRCIS 201

[Close]

BLAST of Sed0014795 vs. NCBI nr
Match: XP_038905989.1 (ganglioside-induced differentiation-associated protein 2 [Benincasa hispida])

HSP 1 Score: 374.0 bits (959), Expect = 7.9e-100
Identity = 181/193 (93.78%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 6   PPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRF 65
           PP+QN L+ LDVFKIKGRDKQGRRILRITGKFFPAR VSLDV+KKHLEEKIFPRLKNKRF
Sbjct: 12  PPDQNHLEKLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVLKKHLEEKIFPRLKNKRF 71

Query: 66  AILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFF 125
            ILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEA+YFVHPDLQARLFLATLGRIFF
Sbjct: 72  TILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFF 131

Query: 126 TNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 185
           T+++YGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP
Sbjct: 132 TSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 191

Query: 186 SMESHVYSMRCIS 199
           S+ESHVYSMRCIS
Sbjct: 192 SVESHVYSMRCIS 204

[Close]

BLAST of Sed0014795 vs. NCBI nr
Match: XP_022923521.1 (ganglioside-induced differentiation-associated protein 2-like [Cucurbita moschata] >XP_023007626.1 ganglioside-induced differentiation-associated protein 2-like [Cucurbita maxima] >KAG6577807.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015847.1 Protein GDAP2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99
Identity = 183/201 (91.04%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MAAQ---DPPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIF 60
           MAAQ    PPEQNQL+NLDVFKIKGRDKQGRRILRITGKFFPAR VSLDVVKKHLEEKIF
Sbjct: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIF 60

Query: 61  PRLKNKRFAILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFL 120
           PRLKNKRF ILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEA+YFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFT+++YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 199
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSIDSHVYSMRCIS 201

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BLAST of Sed0014795 vs. NCBI nr
Match: XP_008448498.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99
Identity = 181/193 (93.78%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 6   PPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRF 65
           PPEQN L+ LDVFKIKGRDKQGRRILRITGKFFPAR VSLDV+KKHLEEKIFPRLKNKRF
Sbjct: 9   PPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRF 68

Query: 66  AILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFF 125
            ILYFH+GVQRSQNFPGIAALRSIYDAIPAAVKANLEA+YFVHPDLQARLFLATLGRIFF
Sbjct: 69  TILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFF 128

Query: 126 TNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 185
           T+++YGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP
Sbjct: 129 TSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 188

Query: 186 SMESHVYSMRCIS 199
           S+ESHVYSMRCIS
Sbjct: 189 SVESHVYSMRCIS 201

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BLAST of Sed0014795 vs. ExPASy Swiss-Prot
Match: Q7JUR6 (Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.8e-13
Identity = 40/140 (28.57%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 22  GRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRFAILYFHTGVQRSQNFP 81
           G D+ GR ++   GK+FPA+++ L+    +L + + P +K   + I YFHT +  + N+P
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGD-YVISYFHT-LTSTNNYP 447

Query: 82  GIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFFTNQLYGKVRYVSRIDL 141
            +  LR +Y  +P   K NL+A Y VHP    ++ +      F    +  KV  +  ++ 
Sbjct: 448 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKM-MTWWFTTFMAPAIKAKVHSLPGVEH 507

Query: 142 LWEHVRRNEIEVPEFIYDHD 162
           L+  + ++++E+P +I ++D
Sbjct: 508 LYSAITKDQLEIPAYITEYD 524

[Close]

BLAST of Sed0014795 vs. ExPASy Swiss-Prot
Match: Q292F9 (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15091 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.8e-13
Identity = 40/140 (28.57%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 22  GRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRFAILYFHTGVQRSQNFP 81
           G D+ GR ++   GK+FPA+++ L+    +L + + P +K   + I YFHT +  + N+P
Sbjct: 390 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVKGD-YVISYFHT-LTSTNNYP 449

Query: 82  GIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFFTNQLYGKVRYVSRIDL 141
            +  LR +Y  +P   K NL+A Y VHP    ++ +      F    +  KV  +  ++ 
Sbjct: 450 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKM-MTWWFTTFMAPAIKAKVHSLPGVEH 509

Query: 142 LWEHVRRNEIEVPEFIYDHD 162
           L+  + ++++E+P +I ++D
Sbjct: 510 LYSAITKDQLEIPAYITEYD 526

[Close]

BLAST of Sed0014795 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.9e-09
Identity = 33/140 (23.57%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 22  GRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRFAILYFHTGVQRSQNFP 81
           G D  GR ++    + F A++  L     +    +  R+ N+ + ++YFHT     +N P
Sbjct: 346 GVDFLGRPVVVFVARHFTAQNTDLGKAVAYF-ISVLDRIVNRDYVVVYFHTH-STEENQP 405

Query: 82  GIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFFTNQLYGKVRYVSRIDL 141
            ++ L+ +Y  +    + NL+A Y VHP + AR+ +      F  + +  KV ++S +  
Sbjct: 406 PMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARI-VTWFFTTFTASSVKEKVHFLSGVQY 465

Query: 142 LWEHVRRNEIEVPEFIYDHD 162
           L++ +  +++++P ++ ++D
Sbjct: 466 LYDWINPDQLDIPAYVLEYD 482

[Close]

BLAST of Sed0014795 vs. ExPASy Swiss-Prot
Match: Q0IHU9 (Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.9e-05
Identity = 29/100 (29.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 65  FAILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIF 124
           + ++Y + G    +  PG+  ++  Y  I   ++ NL++   VHP    R  LA L R F
Sbjct: 187 YMVVYLN-GATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILA-LTRPF 246

Query: 125 FTNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDL 165
            +++   K++YVS +  L E +    + +PE I   DE+L
Sbjct: 247 ISSKFSSKIKYVSTLAELSELIPMEYVHIPETIVKLDEEL 284

[Close]

BLAST of Sed0014795 vs. ExPASy TrEMBL
Match: A0A6J1CVD3 (ganglioside-induced differentiation-associated protein 2-like OS=Momordica charantia OX=3673 GN=LOC111014918 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 184/198 (92.93%), Postives = 193/198 (97.47%), Query Frame = 0


Query: 1   MAAQDPPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRL 60
           MAAQ PPEQNQL+ LDVFKIKGRDKQGRRILRITGKFFPARSVSLDV+KK+L+EKI PRL
Sbjct: 1   MAAQVPPEQNQLERLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVLKKNLQEKILPRL 60

Query: 61  KNKRFAILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATL 120
           KNK FAILYFHTGVQRSQNFPGIAALRSIY+AIPAAVKANLEA+YFVHPDLQARLFLATL
Sbjct: 61  KNKPFAILYFHTGVQRSQNFPGIAALRSIYEAIPAAVKANLEAVYFVHPDLQARLFLATL 120

Query: 121 GRIFFTNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPR 180
           GRIFFTN+LYGKVRYVSRIDLLWE VRR+EIE+PEFIYDHDEDLEYRPMMDYGLESDHPR
Sbjct: 121 GRIFFTNELYGKVRYVSRIDLLWEQVRRSEIEIPEFIYDHDEDLEYRPMMDYGLESDHPR 180

Query: 181 VYGAPSMESHVYSMRCIS 199
           VYGAPSMESHVYSMRCIS
Sbjct: 181 VYGAPSMESHVYSMRCIS 198

[Close]

BLAST of Sed0014795 vs. ExPASy TrEMBL
Match: A0A0A0L0Z7 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100
Identity = 182/193 (94.30%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 6   PPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRF 65
           PPEQN L+ LDVFKIKGRDKQGRRILRITGKFFPAR VSLDV+KKHLEEKIFPRLKNKRF
Sbjct: 9   PPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRF 68

Query: 66  AILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFF 125
            ILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEA+YFVHPDLQARLFLATLGRIFF
Sbjct: 69  TILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFF 128

Query: 126 TNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 185
           T+++YGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP
Sbjct: 129 TSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 188

Query: 186 SMESHVYSMRCIS 199
           S+ESHVYSMRCIS
Sbjct: 189 SVESHVYSMRCIS 201

[Close]

BLAST of Sed0014795 vs. ExPASy TrEMBL
Match: A0A6J1L134 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111500201 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.0e-100
Identity = 183/201 (91.04%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MAAQ---DPPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIF 60
           MAAQ    PPEQNQL+NLDVFKIKGRDKQGRRILRITGKFFPAR VSLDVVKKHLEEKIF
Sbjct: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIF 60

Query: 61  PRLKNKRFAILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFL 120
           PRLKNKRF ILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEA+YFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFT+++YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 199
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSIDSHVYSMRCIS 201

[Close]

BLAST of Sed0014795 vs. ExPASy TrEMBL
Match: A0A6J1E710 (ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431194 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.0e-100
Identity = 183/201 (91.04%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MAAQ---DPPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIF 60
           MAAQ    PPEQNQL+NLDVFKIKGRDKQGRRILRITGKFFPAR VSLDVVKKHLEEKIF
Sbjct: 1   MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIF 60

Query: 61  PRLKNKRFAILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFL 120
           PRLKNKRF ILYFHT VQRSQNFPGIAALRSIY+AIPA VKANLEA+YFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFT+++YGK++YVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEMYGKIKYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSMESHVYSMRCIS 199
           HPRVYGAPS++SHVYSMRCIS
Sbjct: 181 HPRVYGAPSIDSHVYSMRCIS 201

[Close]

BLAST of Sed0014795 vs. ExPASy TrEMBL
Match: A0A1S3BJ81 (ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103490659 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.5e-100
Identity = 181/193 (93.78%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 6   PPEQNQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRF 65
           PPEQN L+ LDVFKIKGRDKQGRRILRITGKFFPAR VSLDV+KKHLEEKIFPRLKNKRF
Sbjct: 9   PPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRF 68

Query: 66  AILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFF 125
            ILYFH+GVQRSQNFPGIAALRSIYDAIPAAVKANLEA+YFVHPDLQARLFLATLGRIFF
Sbjct: 69  TILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFF 128

Query: 126 TNQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 185
           T+++YGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP
Sbjct: 129 TSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAP 188

Query: 186 SMESHVYSMRCIS 199
           S+ESHVYSMRCIS
Sbjct: 189 SVESHVYSMRCIS 201

[Close]

BLAST of Sed0014795 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 283.1 bits (723), Expect = 1.7e-76
Identity = 136/194 (70.10%), Postives = 165/194 (85.05%), Query Frame = 0


Query: 8   EQNQL-DNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRFA 67
           EQ QL + L++FKI GRDK+GR+ILRI GKFFPAR +SLDV+KK+LEEKIFPRL  K FA
Sbjct: 9   EQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFA 68

Query: 68  ILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFFT 127
           +LY HTGVQRS+NFPGI+ALR+IYDAIP  V+ NL+ +YF+HP LQ+RLFLAT GR  F+
Sbjct: 69  VLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFS 128

Query: 128 NQLYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPS 187
             LYGK+RY+SR+D LWEHVRRNEIE+PEF+YDHD+DLEYRPMMDYG ESDH RV+   +
Sbjct: 129 GGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHARVFAGAA 188

Query: 188 MESHV--YSMRCIS 199
           ++S V  +SMRCIS
Sbjct: 189 VDSSVSSFSMRCIS 202

[Close]

BLAST of Sed0014795 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-42
Identity = 75/168 (44.64%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 10  NQLDNLDVFKIKGRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRFAILY 69
           + LD L  F ++G D+ G RI RI GK+FPAR VS + +KK++ +KI  +       ++Y
Sbjct: 47  SDLDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVY 106

Query: 70  FHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFFTNQL 129
            H+ VQ+  N PGI  LR IY+ +P+ +K  L+ +YF+HP L++RL +ATLGR+  +  L
Sbjct: 107 MHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGL 166

Query: 130 YGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 178
           Y K++YVSR+  LWE +++ E+E+P+F+ +HD  LE+RP+ DYG+E D
Sbjct: 167 YWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPD 214

[Close]

BLAST of Sed0014795 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-10
Identity = 35/140 (25.00%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 22  GRDKQGRRILRITGKFFPARSVSLDVVKKHLEEKIFPRLKNKRFAILYFHTGVQRSQNFP 81
           G D +G  ++ + G  F  R + L+    ++ ++  P ++ K ++I+YFH+     Q  P
Sbjct: 404 GVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFEPVIQ-KPYSIVYFHSAAS-LQVQP 463

Query: 82  GIAALRSIYDAIPAAVKANLEALYFVHPDLQARLFLATLGRIFFTNQLYGKVRYVSRIDL 141
            +  ++ +   +    + NL+A+Y +HP    +  + T+ + F  N ++ KV Y  R+  
Sbjct: 464 DLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKATILTM-QFFVDNVVWKKVVYADRLLQ 523

Query: 142 LWEHVRRNEIEVPEFIYDHD 162
           L+++V R ++ +P+F++ HD
Sbjct: 524 LFKYVPREQLTIPDFVFQHD 540

The following BLAST results are available for this feature:

BLAST of Sed0014795 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145479.1	2.7e-100	92.93	ganglioside-induced differentiation-associated protein 2-like [Momordica charant...	[more]
XP_004146166.1	4.6e-100	94.30	ganglioside-induced differentiation-associated protein 2 [Cucumis sativus] >KGN5...	[more]
XP_038905989.1	7.9e-100	93.78	ganglioside-induced differentiation-associated protein 2 [Benincasa hispida]	[more]
XP_022923521.1	1.0e-99	91.04	ganglioside-induced differentiation-associated protein 2-like [Cucurbita moschat...	[more]
XP_008448498.1	1.4e-99	93.78	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis mel...	[more]

BLAST of Sed0014795 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7JUR6	5.8e-13	28.57	Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1	[more]
Q292F9	5.8e-13	28.57	Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15...	[more]
A7T167	3.9e-09	23.57	Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1	[more]
Q0IHU9	5.9e-05	29.00	Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1	[more]

BLAST of Sed0014795 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVD3	1.3e-100	92.93	ganglioside-induced differentiation-associated protein 2-like OS=Momordica chara...	[more]
A0A0A0L0Z7	2.2e-100	94.30	CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002450 P...	[more]
A0A6J1L134	5.0e-100	91.04	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita maxim...	[more]
A0A6J1E710	5.0e-100	91.04	ganglioside-induced differentiation-associated protein 2-like OS=Cucurbita mosch...	[more]
A0A1S3BJ81	6.5e-100	93.78	ganglioside-induced differentiation-associated protein 2 OS=Cucumis melo OX=3656...	[more]

BLAST of Sed0014795 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35750.1	1.7e-76	70.10	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT3G10210.1	1.6e-42	44.64	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT1G69340.1	2.1e-10	25.00	appr-1-p processing enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 27..130 e-value: 1.7E-18 score: 67.2
IPR001251	CRAL-TRIO lipid binding domain	CDD	cd00170	SEC14	coord: 22..136 e-value: 1.11951E-7 score: 46.6094
IPR036865	CRAL-TRIO lipid binding domain superfamily	GENE3D	3.40.525.10		coord: 8..142 e-value: 4.4E-19 score: 70.6
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 8..131
None	No IPR available	PANTHER	PTHR11106:SF103	OS04G0561200 PROTEIN	coord: 8..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014795.1	Sed0014795.1	mRNA
Sed0014795.2	Sed0014795.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0048038	quinone binding