Sed0014685 (gene) Chayote v1

Overview


Name	Sed0014685
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	LG11: 11567775 .. 11568855 (+)
RNA-Seq Expression	Sed0014685
Synteny	Sed0014685

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATCCATTCTTTGATACTTCTCTAAAGCAAAGCCTCTCCATCAAAGTTGTTTCTTTTCTTTAGTAGAGAACTATCCATCCTTGAGCATGGCAGGTCCTCTACAACCACCTCAACGATCTGGGCGCCCAAGCATATTGCGCTGGGTTATAATTGCCCTAGTCGCACTGATCGTACTCGTTGGCCTTATCATACTCATCGTTTGGTTGACTATTAGGCCGAAACGACTAATCTACTCAGTGGAAAGCGCTTCAGTTCAAAACTTTGAATTGACCAAAACTCAACTCATGAATGCCTCCTTTAACTTAGAGGTAAGAGCTTATAATCCCAATAAACGAGTCTCAATTTACTACGATTACGTCACCGTTACGGTTGGGTTTGGGGATCAAGACTTGGCATTCGGCGTGATCAAGCCTTTCTACCAATCTCGCAAAAATGTGACTTTGTTGAACGTAAAACTTGTTGATCAAAACTTCCCGTTGCACGACTCTGTGTCCAAGGATCTAGCACTCCAAAAGGCGGCGGGAGAGATGGATTTGGATTTTTGGATCAAGGCGAGAATTAGATTTAAGGTCGGGGCTTGGAAGTCAGGACATCGGACTCTTCGAGTAAAGTGTTCGCCAGTGATCGTGTACTTGTCCAGGGCCAAGGATTTTAAGAAGGCTTCTTGCTTTACAGAAGTAGACTAAAGCTGGGGATTTGGTTTTGCTTCACAAATTGCTTTTCTTACTTTCTGAATTTGTATTATTGATGGTGTGTGTTGGCTTATTTTTAAGTGTGGAATTTGTGAGCTGTGCTTGTTGTTTTTCAATTGGGTTTGTGTTCATGTTCATGTATATGCTCCTTTTGATCCTTTGTTTTTCCTTTTTCTATCCAGTTTAAGTTTATGTCAGTCCATTCTTTAACAAATAAGTTGAACAATTTGTAATTTTATTTTTATTTGACTTTTCAATTCAATTTGTAATTTGATTTGATTTCAATAGTGGAAACTTGTATGTGAAATCTTTAAGAGATATTTGGATTTGTAAATCTCATTGTTGTATTGTTTTTGCATAAATGAAGTTGTAAAGCATTATCTTC

mRNA sequence

AATTAATCCATTCTTTGATACTTCTCTAAAGCAAAGCCTCTCCATCAAAGTTGTTTCTTTTCTTTAGTAGAGAACTATCCATCCTTGAGCATGGCAGGTCCTCTACAACCACCTCAACGATCTGGGCGCCCAAGCATATTGCGCTGGGTTATAATTGCCCTAGTCGCACTGATCGTACTCGTTGGCCTTATCATACTCATCGTTTGGTTGACTATTAGGCCGAAACGACTAATCTACTCAGTGGAAAGCGCTTCAGTTCAAAACTTTGAATTGACCAAAACTCAACTCATGAATGCCTCCTTTAACTTAGAGGTAAGAGCTTATAATCCCAATAAACGAGTCTCAATTTACTACGATTACGTCACCGTTACGGTTGGGTTTGGGGATCAAGACTTGGCATTCGGCGTGATCAAGCCTTTCTACCAATCTCGCAAAAATGTGACTTTGTTGAACGTAAAACTTGTTGATCAAAACTTCCCGTTGCACGACTCTGTGTCCAAGGATCTAGCACTCCAAAAGGCGGCGGGAGAGATGGATTTGGATTTTTGGATCAAGGCGAGAATTAGATTTAAGGTCGGGGCTTGGAAGTCAGGACATCGGACTCTTCGAGTAAAGTGTTCGCCAGTGATCGTGTACTTGTCCAGGGCCAAGGATTTTAAGAAGGCTTCTTGCTTTACAGAAGTAGACTAAAGCTGGGGATTTGGTTTTGCTTCACAAATTGCTTTTCTTACTTTCTGAATTTGTATTATTGATGGTGTGTGTTGGCTTATTTTTAAGTGTGGAATTTGTGAGCTGTGCTTGTTGTTTTTCAATTGGGTTTGTGTTCATGTTCATGTATATGCTCCTTTTGATCCTTTGTTTTTCCTTTTTCTATCCAGTTTAAGTTTATGTCAGTCCATTCTTTAACAAATAAGTTGAACAATTTGTAATTTTATTTTTATTTGACTTTTCAATTCAATTTGTAATTTGATTTGATTTCAATAGTGGAAACTTGTATGTGAAATCTTTAAGAGATATTTGGATTTGTAAATCTCATTGTTGTATTGTTTTTGCATAAATGAAGTTGTAAAGCATTATCTTC

Coding sequence (CDS)

ATGGCAGGTCCTCTACAACCACCTCAACGATCTGGGCGCCCAAGCATATTGCGCTGGGTTATAATTGCCCTAGTCGCACTGATCGTACTCGTTGGCCTTATCATACTCATCGTTTGGTTGACTATTAGGCCGAAACGACTAATCTACTCAGTGGAAAGCGCTTCAGTTCAAAACTTTGAATTGACCAAAACTCAACTCATGAATGCCTCCTTTAACTTAGAGGTAAGAGCTTATAATCCCAATAAACGAGTCTCAATTTACTACGATTACGTCACCGTTACGGTTGGGTTTGGGGATCAAGACTTGGCATTCGGCGTGATCAAGCCTTTCTACCAATCTCGCAAAAATGTGACTTTGTTGAACGTAAAACTTGTTGATCAAAACTTCCCGTTGCACGACTCTGTGTCCAAGGATCTAGCACTCCAAAAGGCGGCGGGAGAGATGGATTTGGATTTTTGGATCAAGGCGAGAATTAGATTTAAGGTCGGGGCTTGGAAGTCAGGACATCGGACTCTTCGAGTAAAGTGTTCGCCAGTGATCGTGTACTTGTCCAGGGCCAAGGATTTTAAGAAGGCTTCTTGCTTTACAGAAGTAGACTAA

Protein sequence

MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFELTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLLNVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVYLSRAKDFKKASCFTEVD

Homology

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BLAST of Sed0014685 vs. NCBI nr
Match: XP_022937555.1 (uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharacterized protein At1g08160 [Cucurbita pepo subsp. pepo] >KAG6586016.1 hypothetical protein SDJN03_18749, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.8 bits (756), Expect = 2.8e-76
Identity = 147/198 (74.24%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP Q   R  RP+ILR+VI+ LVALIVLVGL++LI+WLT+RPKRL Y+VESA+V NF+
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           ++ TQL NASFN  V+AYNPN+ VS+YYD+VTVTVGFGDQDLAFGVIKPFYQ  K+VT L
Sbjct: 61  MSTTQL-NASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  +NF LHDSVSKDLAL+KAAGEMDLD WIKARIRFKVG WKSGHRTLR++CSPVI
Sbjct: 121 NMDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS+ K+FK+ +CFTEV
Sbjct: 181 VYLSKDKEFKRTACFTEV 197

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BLAST of Sed0014685 vs. NCBI nr
Match: KAG7020792.1 (hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.4 bits (747), Expect = 3.0e-75
Identity = 145/198 (73.23%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP Q   R  R +ILR+VI+ LVALIVLVGL++LI+WLT+RPKRL Y+VESA+V NF+
Sbjct: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           ++ TQL NASFN  V+AYNPN+ VS+YYD+VTVTVGFGDQDLAFGVIKPFYQ  K+VT L
Sbjct: 61  MSTTQL-NASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  +NF LHDSVSKDLAL+KAAGEMDLD WIKARIRFKVG WKSGHRTLR++CSPVI
Sbjct: 121 NMDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS+ K+FK+ +CFTE+
Sbjct: 181 VYLSKDKEFKRTACFTEI 197

[Close]

BLAST of Sed0014685 vs. NCBI nr
Match: XP_022969533.1 (uncharacterized protein At1g08160 [Cucurbita maxima])

HSP 1 Score: 291.6 bits (745), Expect = 5.2e-75
Identity = 145/198 (73.23%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP Q   R  RP+ILR+VI+ LVALIVLVGL++LI+WLT+RPKRL Y+VESA+V NF+
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           ++ TQL NASFN  V+AYNPN+ VS+YYD+VTVTVGFGDQDLAFGVIKPFYQ  K+VT L
Sbjct: 61  MSTTQL-NASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  +NF LHDSVSKDLAL+KAAGEMDLD WIKARIR+KVG WK GHRTLR++CSPVI
Sbjct: 121 NMDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS+ K+FK+ +CFTEV
Sbjct: 181 VYLSKDKEFKRTACFTEV 197

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BLAST of Sed0014685 vs. NCBI nr
Match: XP_008464346.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 uncharacterized protein E6C27_scaffold43053G00810 [Cucumis melo var. makuwa] >TYK20878.1 uncharacterized protein E5676_scaffold284G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 289.3 bits (739), Expect = 2.6e-74
Identity = 145/198 (73.23%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP QPP R+G   ILR+VII LVALI+LVGL +LI+WLTIRPKRL Y+VESA V NF+
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           +T TQL NASF+  VRAYNPNKRVS+YYD +T TVGFGDQDLAFGV+ PFYQ  K+   L
Sbjct: 61  MTNTQL-NASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  QNF LHDSVSKDLAL+++AGEMDLD WIKARIRFKVG WKS HRTLR++CSPVI
Sbjct: 121 NIHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS++K FKK +CFTEV
Sbjct: 181 VYLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Sed0014685 vs. NCBI nr
Match: XP_038894942.1 (uncharacterized protein At1g08160-like [Benincasa hispida])

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-73
Identity = 143/198 (72.22%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP QPP R+G   ILR+V++ +VALI+LVGL +LI+WLTIRPKRL Y+VESASV NF+
Sbjct: 1   MAGPPQPPPRAGPSRILRFVLMFIVALIILVGLAVLIIWLTIRPKRLSYTVESASVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           +T TQL NASF+  VRAYNPNKRV+IYYD +T TVGFGDQDLAFGV+ PFYQ  K+   L
Sbjct: 61  MTSTQL-NASFSFGVRAYNPNKRVAIYYDSITATVGFGDQDLAFGVLSPFYQPHKDERWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  QNF LHDSVSKDLAL++AAGEMDLD WIKARIRFKVG WKS HRTLR++CSPVI
Sbjct: 121 NIHLDAQNFLLHDSVSKDLALERAAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS+++ FKK +CFTEV
Sbjct: 181 VYLSKSQTFKKTTCFTEV 197

[Close]

BLAST of Sed0014685 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-27
Identity = 73/198 (36.87%), Postives = 117/198 (59.09%), Query Frame = 0


Query: 4   PLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFEL-T 63
           P   P    R + +  +I+ALV L +LVGL ILI +LT+RPKRLIY+VE+ASVQ F +  
Sbjct: 24  PRAQPLPGRRMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGN 83

Query: 64  KTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLLNV 123
               +NA F+  +++YNP K VS+ Y  + ++    +Q +A   I PF Q  KN T +  
Sbjct: 84  NDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIET 143

Query: 124 KLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVY 183
           +LV  N  L    ++DL  +K+ G ++++ +I AR+ +K   ++S  RTL+  C+PV++ 
Sbjct: 144 QLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMIN 203

Query: 184 L--SRAKDFKKASCFTEV 199
           +  S    F++  C T +
Sbjct: 204 VTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of Sed0014685 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-17
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 0


Query: 33  LIILIVWLTIRPKRLIYSVESASVQNFELT--KTQLMNASFNLEVRAYNPNKRVSIYYDY 92
           LII +VWL + P+R  +S+  A + +  LT   T L+N+S  L + + NPNK+V IYYD 
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 93  VTVTVGF-GDQDLAFGVIKPFYQSRKNVTLLNVKLVDQNFPLHDSVSKDLALQKAAGEMD 152
           + V   + G Q  +   + PFYQS + + LL   L     P+  S    ++ +++ G++ 
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 153 LDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVY 183
           +   +  ++R+K+G W SG     V C  ++ +
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

[Close]

BLAST of Sed0014685 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = 0


Query: 21  IIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFELTKTQLMNASFNLEVRAYNP 80
           + A+  LIVL G+   +++L  RP+   YS+E  SV    L  T  ++ SFN+ VR+ N 
Sbjct: 79  LAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNG 138

Query: 81  NKRVSIYYD-YVTVTVGFGDQDLAFGVIKPFYQSRKNVTLLNVKLVDQNFPLHDSVSKDL 140
           N ++ +YY+   +V V + D D++ GV+  FYQ  KNVT++ + L      L   + K++
Sbjct: 139 NGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEM 198

Query: 141 ALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVYLSRAKDFKKASCFTEVD 200
             + +   +     IKA ++ K G+ K+    + V C   +  L+         C  +VD
Sbjct: 199 RNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVD 258

[Close]

BLAST of Sed0014685 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 57/165 (34.55%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 16  ILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFELTKTQLMNASFNLEV 75
           IL  +   L+ + VL+G+  LI+WL  RP  + + V  A +  F L  T  +  + +L  
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  RAYNPNKRVSIYYDYVTVTVGFGDQDLAFGV---IKPFYQSRKNVTLLNVKLVDQNFPLH 135
              NPN+R+ +YYD + V   +GDQ   FG+   I  FYQ  KN T++  KLV Q   L 
Sbjct: 104 TIRNPNRRIGVYYDEIEVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLL 163

Query: 136 D-SVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKC 177
           D    KDL     +    +D  ++ +IRFK G  KS     ++KC
Sbjct: 164 DGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKC 206

[Close]

BLAST of Sed0014685 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 51/169 (30.18%), Postives = 85/169 (50.30%), Query Frame = 0


Query: 16  ILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFELTKTQLMNASFNLEV 75
           IL  +   L+A+ V++G+  LI+WL  RP  + + V  A++  F       ++ S +L  
Sbjct: 51  ILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNF 110

Query: 76  RAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLLNVKLVDQNF-PLHDS 135
              NPN+RV +YYD  +V+  +GDQ      +  FYQ  KN T++  K+  QN   L D 
Sbjct: 111 TIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDG 170

Query: 136 VSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVYL 184
              DL   + +G   ++  ++  +RFK    KS     ++KC  + + L
Sbjct: 171 ARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPL 219

[Close]

BLAST of Sed0014685 vs. ExPASy TrEMBL
Match: A0A6J1FH28 (uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 147/198 (74.24%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP Q   R  RP+ILR+VI+ LVALIVLVGL++LI+WLT+RPKRL Y+VESA+V NF+
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           ++ TQL NASFN  V+AYNPN+ VS+YYD+VTVTVGFGDQDLAFGVIKPFYQ  K+VT L
Sbjct: 61  MSTTQL-NASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  +NF LHDSVSKDLAL+KAAGEMDLD WIKARIRFKVG WKSGHRTLR++CSPVI
Sbjct: 121 NMDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS+ K+FK+ +CFTEV
Sbjct: 181 VYLSKDKEFKRTACFTEV 197

[Close]

BLAST of Sed0014685 vs. ExPASy TrEMBL
Match: A0A6J1I194 (uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 145/198 (73.23%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP Q   R  RP+ILR+VI+ LVALIVLVGL++LI+WLT+RPKRL Y+VESA+V NF+
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           ++ TQL NASFN  V+AYNPN+ VS+YYD+VTVTVGFGDQDLAFGVIKPFYQ  K+VT L
Sbjct: 61  MSTTQL-NASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  +NF LHDSVSKDLAL+KAAGEMDLD WIKARIR+KVG WK GHRTLR++CSPVI
Sbjct: 121 NMDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS+ K+FK+ +CFTEV
Sbjct: 181 VYLSKDKEFKRTACFTEV 197

[Close]

BLAST of Sed0014685 vs. ExPASy TrEMBL
Match: A0A5D3DBK2 (LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00070 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.2e-74
Identity = 145/198 (73.23%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP QPP R+G   ILR+VII LVALI+LVGL +LI+WLTIRPKRL Y+VESA V NF+
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           +T TQL NASF+  VRAYNPNKRVS+YYD +T TVGFGDQDLAFGV+ PFYQ  K+   L
Sbjct: 61  MTNTQL-NASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  QNF LHDSVSKDLAL+++AGEMDLD WIKARIRFKVG WKS HRTLR++CSPVI
Sbjct: 121 NIHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS++K FKK +CFTEV
Sbjct: 181 VYLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Sed0014685 vs. ExPASy TrEMBL
Match: A0A1S3CLP6 (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.2e-74
Identity = 145/198 (73.23%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP QPP R+G   ILR+VII LVALI+LVGL +LI+WLTIRPKRL Y+VESA V NF+
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           +T TQL NASF+  VRAYNPNKRVS+YYD +T TVGFGDQDLAFGV+ PFYQ  K+   L
Sbjct: 61  MTNTQL-NASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  QNF LHDSVSKDLAL+++AGEMDLD WIKARIRFKVG WKS HRTLR++CSPVI
Sbjct: 121 NIHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS++K FKK +CFTEV
Sbjct: 181 VYLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Sed0014685 vs. ExPASy TrEMBL
Match: A0A0A0LVK3 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.4e-73
Identity = 143/198 (72.22%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MAGPLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFE 60
           MAGP QP  RSG   ILR+VII LVALI+LVGL +LI+WLT+RPKRL Y+VESA V NF+
Sbjct: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60

Query: 61  LTKTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLL 120
           +T TQL NASF+  VRAYNPNKRVS+YYD +T TVGFGDQDL+FGV+ PFYQ  KN   L
Sbjct: 61  MTDTQL-NASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWL 120

Query: 121 NVKLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVI 180
           N+ L  QNF LHDSVSK+LAL+++AGEMDLD WIKARIRFKVG WKS HRTLR++CSPVI
Sbjct: 121 NIHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVI 180

Query: 181 VYLSRAKDFKKASCFTEV 199
           VYLS++K FKK +CFTEV
Sbjct: 181 VYLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Sed0014685 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-40
Identity = 80/192 (41.67%), Postives = 124/192 (64.58%), Query Frame = 0


Query: 7   PPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFELTKTQL 66
           P Q   RPS++ ++ + ++ LI +  +  LI WL  +PK+L Y+VE+ASVQNF LT    
Sbjct: 16  PAQPLRRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNH 75

Query: 67  MNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLLNVKLVD 126
           M+A+F   ++++NPN R+S+YY  V + V F DQ LAF  ++PF+Q R NV  ++  L+ 
Sbjct: 76  MSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIA 135

Query: 127 QNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVYLSRA 186
           +N  +  S  KDL  Q + G++  + ++KAR+RFKVG WKS HRT ++KCS V V LS+ 
Sbjct: 136 ENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQP 195

Query: 187 KDFKKASCFTEV 199
              + +SC  ++
Sbjct: 196 NKSQNSSCDADI 207

[Close]

BLAST of Sed0014685 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 73/198 (36.87%), Postives = 117/198 (59.09%), Query Frame = 0


Query: 4   PLQPPQRSGRPSILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFEL-T 63
           P   P    R + +  +I+ALV L +LVGL ILI +LT+RPKRLIY+VE+ASVQ F +  
Sbjct: 24  PRAQPLPGRRMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGN 83

Query: 64  KTQLMNASFNLEVRAYNPNKRVSIYYDYVTVTVGFGDQDLAFGVIKPFYQSRKNVTLLNV 123
               +NA F+  +++YNP K VS+ Y  + ++    +Q +A   I PF Q  KN T +  
Sbjct: 84  NDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIET 143

Query: 124 KLVDQNFPLHDSVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVY 183
           +LV  N  L    ++DL  +K+ G ++++ +I AR+ +K   ++S  RTL+  C+PV++ 
Sbjct: 144 QLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMIN 203

Query: 184 L--SRAKDFKKASCFTEV 199
           +  S    F++  C T +
Sbjct: 204 VTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of Sed0014685 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = 0


Query: 21  IIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFELTKTQLMNASFNLEVRAYNP 80
           + A+  LIVL G+   +++L  RP+   YS+E  SV    L  T  ++ SFN+ VR+ N 
Sbjct: 79  LAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNG 138

Query: 81  NKRVSIYYD-YVTVTVGFGDQDLAFGVIKPFYQSRKNVTLLNVKLVDQNFPLHDSVSKDL 140
           N ++ +YY+   +V V + D D++ GV+  FYQ  KNVT++ + L      L   + K++
Sbjct: 139 NGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEM 198

Query: 141 ALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVYLSRAKDFKKASCFTEVD 200
             + +   +     IKA ++ K G+ K+    + V C   +  L+         C  +VD
Sbjct: 199 RNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVD 258

[Close]

BLAST of Sed0014685 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = 0


Query: 21  IIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFELTKTQLMNASFNLEVRAYNP 80
           + A+  LIVL G+   +++L  RP+   YS+E  SV    L  T  ++ SFN+ VR+ N 
Sbjct: 79  LAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNG 138

Query: 81  NKRVSIYYD-YVTVTVGFGDQDLAFGVIKPFYQSRKNVTLLNVKLVDQNFPLHDSVSKDL 140
           N ++ +YY+   +V V + D D++ GV+  FYQ  KNVT++ + L      L   + K++
Sbjct: 139 NGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEM 198

Query: 141 ALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKCSPVIVYLSRAKDFKKASCFTEVD 200
             + +   +     IKA ++ K G+ K+    + V C   +  L+         C  +VD
Sbjct: 199 RNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVD 258

[Close]

BLAST of Sed0014685 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 57/165 (34.55%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 16  ILRWVIIALVALIVLVGLIILIVWLTIRPKRLIYSVESASVQNFELTKTQLMNASFNLEV 75
           IL  +   L+ + VL+G+  LI+WL  RP  + + V  A +  F L  T  +  + +L  
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  RAYNPNKRVSIYYDYVTVTVGFGDQDLAFGV---IKPFYQSRKNVTLLNVKLVDQNFPLH 135
              NPN+R+ +YYD + V   +GDQ   FG+   I  FYQ  KN T++  KLV Q   L 
Sbjct: 104 TIRNPNRRIGVYYDEIEVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLL 163

Query: 136 D-SVSKDLALQKAAGEMDLDFWIKARIRFKVGAWKSGHRTLRVKC 177
           D    KDL     +    +D  ++ +IRFK G  KS     ++KC
Sbjct: 164 DGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKC 206

The following BLAST results are available for this feature:

BLAST of Sed0014685 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937555.1	2.8e-76	74.24	uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharact...	[more]
KAG7020792.1	3.0e-75	73.23	hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022969533.1	5.2e-75	73.23	uncharacterized protein At1g08160 [Cucurbita maxima]	[more]
XP_008464346.1	2.6e-74	73.23	PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 unchar...	[more]
XP_038894942.1	1.7e-73	72.22	uncharacterized protein At1g08160-like [Benincasa hispida]	[more]

BLAST of Sed0014685 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	1.4e-27	36.87	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9FI03	1.4e-17	31.37	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9ZVD2	1.7e-15	29.44	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
Q9FNH6	1.7e-15	34.55	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	2.4e-14	30.18	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]

BLAST of Sed0014685 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FH28	1.3e-76	74.24	uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 ...	[more]
A0A6J1I194	2.5e-75	73.23	uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE...	[more]
A0A5D3DBK2	1.2e-74	73.23	LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CLP6	1.2e-74	73.23	uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 S...	[more]
A0A0A0LVK3	2.4e-73	72.22	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 ...	[more]

BLAST of Sed0014685 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	1.2e-40	41.67	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	1.0e-28	36.87	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.1	1.2e-16	29.44	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.2	1.2e-16	29.44	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	1.2e-16	34.55	NDR1/HIN1-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.40.1820		coord: 50..176 e-value: 1.2E-5 score: 27.1
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 9..197
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 9..197
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 43..125
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 75..176 e-value: 4.9E-13 score: 49.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014685.1	Sed0014685.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma