Sed0014670 (gene) Chayote v1

Overview


Name	Sed0014670
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SHI RELATED SEQUENCE 1
Location	LG10: 7959052 .. 7960668 (-)
RNA-Seq Expression	Sed0014670
Synteny	Sed0014670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGATAAGAAAAACAAGAATTGGGGTTTGGGTTTGGGTTTGGGTTTGGGTAGTAGGAGGAGAAGTGGTGTTTGTTTAGAGGGACAGAAGAAGAATTGGGGACTGCTTCCATTCAGAGCCGAAACTGCAACAAAATCAGACAAACAATCAGAAGAGGAAATTAGGAGACTCAGACTCAGACTCTTAAATTTCAGCCCACAACCAAAAAAACTGCGCACCACAGAAGAGAGAGAGAAAAAGCATGGCGGCGTTGCAGAGAGAGGTGTAATTCTGAGCCATAAATGTGGATGTGTATGTATTGCGAGTAACAATATATTGAAAAAAGTGGGAATTCAAAGCACCTTCCCCCCACTATCATCACCCACCACTTGGTAATTAACCATTCCTCCTCTCTCTCTTTCCCTTTTTTTTTTTTTTTTACTCATATACCCTCAAAATTGAAATTCATCTAAAACCCATATTCAGCCTGGGGTTGGATCCTCTGATTATGGGTTTTAAACAAACAATAAAGTTTAGGACAGAACAAGGAGAATGTCTAGCTTTTTCACTTTAGGAGGGAGTGGAGGAGGAAGGGGAAATCAAGATCAAGAACCCCAACCACCCCACCACACAAACAGACCGAATGAAATTACTCACCCGGAAAGCTTGTATTGGTACAAGCCCGGCAACATCGAGCTATGGCAACAACAGCAGCAGCAGCAGCAGCAACAACAACACGAAGAACAAGTGTTGTTTCATCACAACATGAACCACCCCCACCCGGTAGGGGGACAGCGGCGAGGCTCGGATGAGTCCTCGTCGAGATCGGGTAATTTCATGATTGGATCAGGAGGGGGAAGTGGAATCAGCTGCCAAGATTGTGGGAACCAAGCCAAGAAAGACTGCAGCCATATGCGGTGCAGGACTTGCTGCAAGACCCGGGGGTTCCCTTGCCAAACACACGTCAAAAGCACTTGGGTCCCTGCAGCCAAACGCCGCGAACGCCAAGAGAAGCTCTCCGCCTTACAATCACATAACCAACAACAACCACTTACCACTTTTCCCAAACGCCACAGAGATTATAACAACAACATTTCTGGTACTAATAATACTCTTTTTTTTCCTCTTTTTTTCATTTTTACTTTTCGATTGCGTGTTGCAGATATCAATCTTCTCCGACTTTTTCTGCCTCCCCTTACTGTTTTCATTTATTTTTATTAATTATTTAATTTTTGGGGTTTTTTAAAATTTTAGGGTTAGAAATTGGGAATTTCCCACCGGAGCTAAACTCACCGGCGGTGTTCCGTTGCGTACGTGTCAGCTCCACCGACGAATCCGACGAACAATACGCGTATCAAACGGCGGTCAACATCGGCGGACACGTTTTCAAAGGAATTCTATACGATCAAGGACCGGAAAATAATTATATCGCCGCCGGCGAGACCTCCTCCGGCGGCGGCGGGAGTAGTAGTGGAATGCAGCCGCTCAATTTCATCGCCGGCGCCGGCGATGCCACCACCGGCAGCGGCGGTTCCTCCGCCGCATTACCGTTGCTCGATCCATCCTCCTTGTATTCAACGCCGCTCAGTAGCGGCTACATGGCGGGTACGCAATTCTTCATACCACCAAGATCTTAA

mRNA sequence

AGAAGATAAGAAAAACAAGAATTGGGGTTTGGGTTTGGGTTTGGGTTTGGGTAGTAGGAGGAGAAGTGGTGTTTGTTTAGAGGGACAGAAGAAGAATTGGGGACTGCTTCCATTCAGAGCCGAAACTGCAACAAAATCAGACAAACAATCAGAAGAGGAAATTAGGAGACTCAGACTCAGACTCTTAAATTTCAGCCCACAACCAAAAAAACTGCGCACCACAGAAGAGAGAGAGAAAAAGCATGGCGGCGTTGCAGAGAGAGGTGTAATTCTGAGCCATAAATGTGGATGTGTATGTATTGCGAGTAACAATATATTGAAAAAAGTGGGAATTCAAAGCACCTTCCCCCCACTATCATCACCCACCACTTGGTAATTAACCATTCCTCCTCTCTCTCTTTCCCTTTTTTTTTTTTTTTTACTCATATACCCTCAAAATTGAAATTCATCTAAAACCCATATTCAGCCTGGGGTTGGATCCTCTGATTATGGGTTTTAAACAAACAATAAAGTTTAGGACAGAACAAGGAGAATGTCTAGCTTTTTCACTTTAGGAGGGAGTGGAGGAGGAAGGGGAAATCAAGATCAAGAACCCCAACCACCCCACCACACAAACAGACCGAATGAAATTACTCACCCGGAAAGCTTGTATTGGTACAAGCCCGGCAACATCGAGCTATGGCAACAACAGCAGCAGCAGCAGCAGCAACAACAACACGAAGAACAAGTGTTGTTTCATCACAACATGAACCACCCCCACCCGGTAGGGGGACAGCGGCGAGGCTCGGATGAGTCCTCGTCGAGATCGGGTAATTTCATGATTGGATCAGGAGGGGGAAGTGGAATCAGCTGCCAAGATTGTGGGAACCAAGCCAAGAAAGACTGCAGCCATATGCGGTGCAGGACTTGCTGCAAGACCCGGGGGTTCCCTTGCCAAACACACGTCAAAAGCACTTGGGTCCCTGCAGCCAAACGCCGCGAACGCCAAGAGAAGCTCTCCGCCTTACAATCACATAACCAACAACAACCACTTACCACTTTTCCCAAACGCCACAGAGATTATAACAACAACATTTCTGGGTTAGAAATTGGGAATTTCCCACCGGAGCTAAACTCACCGGCGGTGTTCCGTTGCGTACGTGTCAGCTCCACCGACGAATCCGACGAACAATACGCGTATCAAACGGCGGTCAACATCGGCGGACACGTTTTCAAAGGAATTCTATACGATCAAGGACCGGAAAATAATTATATCGCCGCCGGCGAGACCTCCTCCGGCGGCGGCGGGAGTAGTAGTGGAATGCAGCCGCTCAATTTCATCGCCGGCGCCGGCGATGCCACCACCGGCAGCGGCGGTTCCTCCGCCGCATTACCGTTGCTCGATCCATCCTCCTTGTATTCAACGCCGCTCAGTAGCGGCTACATGGCGGGTACGCAATTCTTCATACCACCAAGATCTTAA

Coding sequence (CDS)

ATGTCTAGCTTTTTCACTTTAGGAGGGAGTGGAGGAGGAAGGGGAAATCAAGATCAAGAACCCCAACCACCCCACCACACAAACAGACCGAATGAAATTACTCACCCGGAAAGCTTGTATTGGTACAAGCCCGGCAACATCGAGCTATGGCAACAACAGCAGCAGCAGCAGCAGCAACAACAACACGAAGAACAAGTGTTGTTTCATCACAACATGAACCACCCCCACCCGGTAGGGGGACAGCGGCGAGGCTCGGATGAGTCCTCGTCGAGATCGGGTAATTTCATGATTGGATCAGGAGGGGGAAGTGGAATCAGCTGCCAAGATTGTGGGAACCAAGCCAAGAAAGACTGCAGCCATATGCGGTGCAGGACTTGCTGCAAGACCCGGGGGTTCCCTTGCCAAACACACGTCAAAAGCACTTGGGTCCCTGCAGCCAAACGCCGCGAACGCCAAGAGAAGCTCTCCGCCTTACAATCACATAACCAACAACAACCACTTACCACTTTTCCCAAACGCCACAGAGATTATAACAACAACATTTCTGGGTTAGAAATTGGGAATTTCCCACCGGAGCTAAACTCACCGGCGGTGTTCCGTTGCGTACGTGTCAGCTCCACCGACGAATCCGACGAACAATACGCGTATCAAACGGCGGTCAACATCGGCGGACACGTTTTCAAAGGAATTCTATACGATCAAGGACCGGAAAATAATTATATCGCCGCCGGCGAGACCTCCTCCGGCGGCGGCGGGAGTAGTAGTGGAATGCAGCCGCTCAATTTCATCGCCGGCGCCGGCGATGCCACCACCGGCAGCGGCGGTTCCTCCGCCGCATTACCGTTGCTCGATCCATCCTCCTTGTATTCAACGCCGCTCAGTAGCGGCTACATGGCGGGTACGCAATTCTTCATACCACCAAGATCTTAA

Protein sequence

MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKPGNIELWQQQQQQQQQQQHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNFMIGSGGGSGISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQSHNQQQPLTTFPKRHRDYNNNISGLEIGNFPPELNSPAVFRCVRVSSTDESDEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQPLNFIAGAGDATTGSGGSSAALPLLDPSSLYSTPLSSGYMAGTQFFIPPRS

Homology

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BLAST of Sed0014670 vs. NCBI nr
Match: XP_004149998.1 (protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN48885.1 hypothetical protein Csa_003789 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 1.6e-115
Identity = 240/340 (70.59%), Postives = 262/340 (77.06%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHP---ESLYWYKPGNIELWQQQQQQQ 60
           MS FFTLGG GGGR   D+E     + NRPN+  HP    SL+WYK GN+ELWQQQQQQQ
Sbjct: 1   MSGFFTLGGGGGGR---DEE----QNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQQQ 60

Query: 61  QQQQHEEQVLFH-----HNMNHPHPVGGQRRGSDESSSRSGNFMI---GSGGGSGISCQD 120
               H+EQ LF           P+      R SDESSSRSGNFM+   GSGGG GISCQD
Sbjct: 61  HHHHHQEQPLFQTQSRTTTTTTPYSAPLAVRNSDESSSRSGNFMMISSGSGGG-GISCQD 120

Query: 121 CGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS---HNQQQP 180
           CGNQAKKDCSHMRCRTCCK+RGF C+THVKSTWVPAAKRRERQ+KL+ALQ+   H+ QQ 
Sbjct: 121 CGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHHHQQQ 180

Query: 181 LTTF-----PKRHRDY------------NNNISGLEIGNFPPELNSPAVFRCVRVSSTDE 240
           L        PKRHRDY            NNN SGLEIGNFP ELNSPAVFRCVRVSS D+
Sbjct: 181 LQLHGGDNNPKRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSADD 240

Query: 241 SDEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQPLNFIAGAGDA 300
           +D+QYAYQTAVNIGGHVFKGILYDQGPENNYI  GETSSGGGGSSSG+QPLNFIAGA DA
Sbjct: 241 TDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFIAGAADA 300

Query: 301 TTGSGGSSAALPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           TTGSGGS+AALPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 TTGSGGSTAALPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 331

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BLAST of Sed0014670 vs. NCBI nr
Match: XP_008440782.1 (PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo] >KAA0025701.1 protein SHI RELATED SEQUENCE 1 [Cucumis melo var. makuwa] >TYK12576.1 protein SHI RELATED SEQUENCE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 417.5 bits (1072), Expect = 9.7e-113
Identity = 235/339 (69.32%), Postives = 257/339 (75.81%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHP---ESLYWYKPGNIELWQQQQQQQ 60
           MS FFTLGG GGGR       +   + NRPN+  HP    SL+WYK GN+ELW  QQQQQ
Sbjct: 1   MSGFFTLGGGGGGR-------EEEQNNNRPNQFIHPPPDSSLFWYKAGNVELW--QQQQQ 60

Query: 61  QQQQHEEQVLFH-----HNMNHPHPVGGQRRGSDESSSRSGNFMI---GSGGGSGISCQD 120
               H+EQ LF           P+      R SDESSSRSGNFM+   GSGGG GISCQD
Sbjct: 61  HHHHHQEQPLFQTQSRTTTTTTPYSAPLTVRNSDESSSRSGNFMMISSGSGGG-GISCQD 120

Query: 121 CGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS--HNQQQPL 180
           CGNQAKKDCSHMRCRTCCK+RGF C+THVKSTWVPAAKRRERQ+KL+ALQ+  H+QQQ L
Sbjct: 121 CGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQQL 180

Query: 181 TTF-----PKRHRDY------------NNNISGLEIGNFPPELNSPAVFRCVRVSSTDES 240
                   PKRHRDY            NNN SGLEIGNFP ELNSPAVFRCVRVSS D++
Sbjct: 181 QLHGGDNNPKRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSADDT 240

Query: 241 DEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQPLNFIAGAGDAT 300
           D+QYAYQTAVNIGGHVFKGILYDQGPENNYI  GETSSGGGGSSSG+QPLNFI GA D T
Sbjct: 241 DDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFITGAADTT 300

Query: 301 TGSGGSSAALPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           TGSGGS+AALPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 TGSGGSTAALPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 328

[Close]

BLAST of Sed0014670 vs. NCBI nr
Match: KAG6603931.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402.1 bits (1032), Expect = 4.2e-108
Identity = 228/331 (68.88%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKPGNIELWQQQQQQQQQQ 60
           MS FF+LGG GG   +Q+ +    H  ++ N  T+PE+L+WYK GN+ELWQQQ     Q 
Sbjct: 1   MSGFFSLGG-GGREDHQEHQEHQDHQEHQQNNDTNPETLFWYK-GNVELWQQQHHHHHQH 60

Query: 61  QHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNF-MIGSG-GGSGISCQDCGNQAKKDC 120
             +EQ LF      P+      R SDESSSRSGNF MIGSG GG GISCQDCGNQAKKDC
Sbjct: 61  PQQEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDC 120

Query: 121 SHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS-HNQQQPLTTFPKRHRDY 180
            HMRCRTCCK+RGF C+THVKSTWVPAAKRRERQEKL+ALQ+ H         PKRHRDY
Sbjct: 121 VHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDY 180

Query: 181 N-------------NNISGLEIGNFPPELNSPAVFRCVRVSSTDESDEQYAYQTAVNIGG 240
           N             NN SGLEIGNFP ELNSPAVFRCVRVSSTDESD+QYAYQTAVNIGG
Sbjct: 181 NPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGG 240

Query: 241 HVFKGILYDQGPENNYIAAGETSS------GGGGSSSGMQPLNFIAGAGDATTGSGGSSA 300
           HVFKGILYDQGPE NYI   ETSS      GGGGSSSG+QPLNFI GA DATT SGGSSA
Sbjct: 241 HVFKGILYDQGPETNYIPPAETSSGGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSA 300

Query: 301 ALPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           ALPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 ALPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 328

[Close]

BLAST of Sed0014670 vs. NCBI nr
Match: XP_023543255.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-107
Identity = 229/331 (69.18%), Postives = 250/331 (75.53%), Query Frame = 0


Query: 1   MSSFFTLGGSG--GGRGNQDQEPQPPHHTNRPNEITHPESLYWYKPGNIELWQQQQQQQQ 60
           MS FF+LGG G    + +QD +    H  ++ N  T+PE+L+WYK GN+ELWQQQ    Q
Sbjct: 1   MSGFFSLGGGGREDHQDHQDHQDHQDHQDHQQNNDTNPETLFWYK-GNVELWQQQHHHHQ 60

Query: 61  QQQHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNF-MIGSG-GGSGISCQDCGNQAKK 120
             Q +EQ LF      P+      R SDESSSRSGNF MIGSG GG GISCQDCGNQAKK
Sbjct: 61  HPQ-QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKK 120

Query: 121 DCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS-HNQQQPLTTFPKRHR 180
           DC HMRCRTCCK+RGF C+THVKSTWVPAAKRRERQEKL+ALQ+ H         PKRHR
Sbjct: 121 DCVHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHR 180

Query: 181 DYN-------------NNISGLEIGNFPPELNSPAVFRCVRVSSTDESDEQYAYQTAVNI 240
           DYN             NN SGLEIGNFP ELNSPAVFRCVRVSSTDESD+QYAYQTAVNI
Sbjct: 181 DYNPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNI 240

Query: 241 GGHVFKGILYDQGPENNYIAAGETSS----GGGGSSSGMQPLNFIAGAGDATTGSGGSSA 300
           GGHVFKGILYDQGPE NYI   ETSS    GGGGSSSG+QPLNFI GA DATT SGGSSA
Sbjct: 241 GGHVFKGILYDQGPETNYIPPAETSSGGGGGGGGSSSGVQPLNFITGATDATTASGGSSA 300

Query: 301 ALPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           ALPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 ALPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 328

[Close]

BLAST of Sed0014670 vs. NCBI nr
Match: XP_022949893.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata] >XP_022949894.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata] >XP_022949895.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata])

HSP 1 Score: 397.5 bits (1020), Expect = 1.0e-106
Identity = 230/330 (69.70%), Postives = 250/330 (75.76%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKPGNIELWQQQQQQQQQQ 60
           MS FF+LGG GG   +QD +    H  ++ N  T+PE+L+WYK GN+ELWQQQ    Q  
Sbjct: 1   MSGFFSLGG-GGREEHQDHQ---DHQEHQQNNDTNPETLFWYK-GNVELWQQQHHHHQHP 60

Query: 61  QHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNF-MIGSG-GGSGISCQDCGNQAKKDC 120
           Q +EQ LF      P+      R SDESSSRSGNF MIGSG GG GISCQDCGNQAKKDC
Sbjct: 61  Q-QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDC 120

Query: 121 SHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS-HNQQQPLTTFPKRHRDY 180
            HMRCRTCCK+RGF C+THVKSTWVPAAKRRERQEKL+ALQ+ H         PKRHRDY
Sbjct: 121 VHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDY 180

Query: 181 N-------------NNISGLEIGNFPPELNSPAVFRCVRVSSTDESDEQYAYQTAVNIGG 240
           N             NN SGLEIGNFP ELNSPAVFRCVRVSSTDESD+QYAYQTAVNIGG
Sbjct: 181 NPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGG 240

Query: 241 HVFKGILYDQGPENNYIAAGETSS-----GGGGSSSGMQPLNFIAGAGDATTGSGGSSAA 300
           HVFKGILYDQGPE NYI   ETSS     GGGGSSSG+QPLNFI GA DATT SGGSSAA
Sbjct: 241 HVFKGILYDQGPETNYIPPAETSSGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAA 300

Query: 301 LPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           LPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 LPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 323

[Close]

BLAST of Sed0014670 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 2.1e-65
Identity = 171/381 (44.88%), Postives = 226/381 (59.32%), Query Frame = 0


Query: 1   MSSFFTL-GGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKP--------------- 60
           M+ FF+L GG GGG G  + +     +TN P  ++  E+  WY+                
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVS--EAWLWYRNPNVNANANTNVNANA 60

Query: 61  --------GNIELWQQQQQQQ---QQQQHEEQVLFH------------HN---MNHPHPV 120
                   G +ELWQ   QQ+   Q QQH++++  +            HN   ++     
Sbjct: 61  PSSSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETST 120

Query: 121 GGQRRGSDESSSRSGNFMIGSGGGS-GISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTH 180
            G  R +     RSG    GSGGGS G+SCQDCGNQAKKDCSHMRCRTCCK+RGF C TH
Sbjct: 121 AGAGRAAAMMMIRSG----GSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTH 180

Query: 181 VKSTWVPAAKRRERQEKLSALQSHNQQQPLTTFPKRHRD----YNNNI--------SGLE 240
           V+STWVPAAKRRERQ++L+ +Q   Q     + PKRHR+     ++++        SGLE
Sbjct: 181 VRSTWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLE 240

Query: 241 IGNFPPELNSPAVFRCVRVSSTDESDEQYAYQTAVNIGGHVFKGILYDQGPEN------N 300
           +GNFP E++S AVFRCVRVSS ++ +E++AYQTAV+IGGH+FKGILYD GP +      N
Sbjct: 241 VGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYN 300

Query: 301 YIAAGETSSGGGGSSSGMQPLNFI-------AGAGDATTGSGG----SSAALPLLDPSSL 310
            +AAGE+SSGGGG+    Q LN I       A A  +T   GG    S+AA   +DP++L
Sbjct: 301 VVAAGESSSGGGGA----QQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAAL 360

[Close]

BLAST of Sed0014670 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.9e-59
Identity = 159/350 (45.43%), Postives = 198/350 (56.57%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYK---------------PG 60
           M+ FF+LG  GGG    +       +TN P+  +  ES  W +                G
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRT----NTNNPSS-SGTESWLWCRNPNSNADGGEAGPSYKG 60

Query: 61  NIELWQQQQQQQ---QQQQHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNFMIGSGGG 120
            +ELWQ    Q+   QQQQ ++Q L  +       VG   R   E+S  +   M    G 
Sbjct: 61  TLELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGS 120

Query: 121 SGISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQSHN 180
            G SCQDCGNQ+KKDCSHMRCRTCCK+RG  C THVKSTWVPAAKRRERQ++LS  Q   
Sbjct: 121 GGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQ--Q 180

Query: 181 QQQPLTTFPKRHRDY--------------NNNISGLEIGNFPPELNSPAVFRCVRVSSTD 240
            QQ   + PKR R+               +NN SGLE+GNFPPE++S AVFRCVRVSS D
Sbjct: 181 PQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVD 240

Query: 241 ESDEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQPLNFIAGAGD 300
           + +E+YAY+TAV+IGGHVFKG+LYDQGP        E SS GGGS    QPLN I     
Sbjct: 241 DEEEEYAYKTAVSIGGHVFKGVLYDQGP-------AERSSSGGGS----QPLNLITAGPS 300

Query: 301 ATTGSGG--------SSAALPLLDPSSL-YSTPLSSGYMAGTQFFIPPRS 310
           A++ S           S +   +DP+SL Y TP+++ +M GT FF   RS
Sbjct: 301 ASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINT-FMTGTHFFSNSRS 331

[Close]

BLAST of Sed0014670 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.4e-58
Identity = 162/366 (44.26%), Postives = 202/366 (55.19%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKPGN-------------- 60
           M++FF+LG      GNQ+Q+ Q     +    +   ES  W+   N              
Sbjct: 1   MANFFSLG------GNQEQQHQ---EISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNT 60

Query: 61  ---IELWQQQQQQQQQQQHEEQVLFHHNMNHP-HP------------VGGQRRG-----S 120
               ELWQ     Q Q QH +Q        HP +P            VG  R G      
Sbjct: 61  YKGFELWQSGNTPQHQHQHHQQ---QQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAG 120

Query: 121 DESSSRSGNFMIGSGGGSGISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPA 180
           D  +SRSG  M+ SGGG GISCQDCGNQAKKDC HMRCRTCCK+RGF CQTHVKSTWVPA
Sbjct: 121 DHEASRSGFVMMRSGGG-GISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPA 180

Query: 181 AKRRERQEKLSALQSHNQQQPLTTFPKRHRDYN----------------NNISGLEIGNF 240
           AKRRERQ++L+ALQ   QQQ        H++                  +N +GLE+G F
Sbjct: 181 AKRRERQQQLAALQ--QQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKF 240

Query: 241 PPELNSPAVFRCVRVSSTDESDEQYAYQTAVNIGGHVFKGILYDQGPENNY----IAAGE 300
           P ++ + AVF+C+++SS ++ ++Q AYQ AV+IGGHVFKGILYDQG E+ Y     A G+
Sbjct: 241 PSKVRTSAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGD 300

Query: 301 TSSGGGGSSSGMQPLNFIAGAGDATTGSGGSSAALP--LLDPSSLYSTPLSSGYMAGTQF 310
           TSSGG          N  A A   TT  G ++AA P   LDP SL+  PLS+  +AGTQF
Sbjct: 301 TSSGGSAGGVQHHHHNSAAVATATTTSGGDATAAGPSNFLDP-SLFPAPLSTFMVAGTQF 350

[Close]

BLAST of Sed0014670 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.2e-54
Identity = 154/363 (42.42%), Postives = 199/363 (54.82%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQE----PQPPHHTNRPNEI-THPESLYWYKPGNIELW----- 60
           M+ FF LGG      N  Q+     +  HH ++ N +  + + +Y    G  E+W     
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKG-FEIWPPQYF 60

Query: 61  QQQQQQQQQQQHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNFMIGSG---GG----- 120
           QQQ+ QQQQQQ +      +  +      G    ++ + SRS  F + S    GG     
Sbjct: 61  QQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTR 120

Query: 121 -SGISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQSH 180
             G++CQDCGNQAKKDC HMRCRTCCK+RGF CQTHVKSTWVPAAKRRER  +L++LQ H
Sbjct: 121 QGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHH 180

Query: 181 NQQQPLTTFPKRHRDYN--------------------------NNISGLEIG-NFPPELN 240
           +     T   KR R+ +                          N+ SGLE+  + PPE+N
Sbjct: 181 SASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVN 240

Query: 241 SPAVFRCVRVSS--TDESDEQYAYQTAVNIGGHVFKGILYDQGPEN------NYIAAGET 300
           SPA+FRCVRVSS   DE D+ YAYQTAVNIGGH+FKGILYDQGPE+      N +A+  T
Sbjct: 241 SPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTAT 300

Query: 301 SSGGGGSSSGMQPLNFIAGAGDATTGSGGSSAALPLLDPSSLYSTPLSSGYMAGTQFFIP 310
           ++            N    A    TG+  +     +LDPSSLY   L+S ++AGT FF P
Sbjct: 301 TT------------NVEETATKTVTGNNNNGL---MLDPSSLYPAQLNS-FIAGTPFFTP 346

[Close]

BLAST of Sed0014670 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-47
Identity = 142/345 (41.16%), Postives = 192/345 (55.65%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKP-GNIELWQQQQQQQQQ 60
           M+  F+LGG+    G++++E Q    TN            WY+   N         QQ  
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTN----------WVWYRSNANTNNINPSSSQQVW 60

Query: 61  QQHEEQVLFHHNMNHPHPVGGQRRGSD--ESSSRSGNFMIGSGGGSGISCQDCGNQAKKD 120
           Q   EQ+L HH   H HP   Q++  D         + +  S     ISC+DCGNQAKKD
Sbjct: 61  QIPPEQMLMHH---HSHP---QQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKD 120

Query: 121 CSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKL--------SALQSHNQQQPLTT 180
           C+HMRCRTCCK+RGF C THV+STW+P A+RRERQ++L            S       ++
Sbjct: 121 CTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSS 180

Query: 181 FPKRHRD-----------YNNNISGLEIG--NFPPELNSPAVFRCVRVSSTDE-SDEQYA 240
            PKRHRD             ++ +GLE+G  +FP E++S A+FRCV++S  D+  D QYA
Sbjct: 181 IPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYA 240

Query: 241 YQTAVNIGGHVFKGILYDQGPENNYIAAG------ETSSGGGGSSSGMQPLNFIAGAGDA 300
           YQT VNIGGH+FKGILYDQGPE++Y++ G      ++SS GGG   G  P N        
Sbjct: 241 YQTTVNIGGHLFKGILYDQGPESSYMSGGSGGSDHQSSSAGGG--GGGHPFN----PPVV 300

Query: 301 TTGSGGSSAALPLLDPSS--LYSTPLSSGYM--AGTQFF-IPPRS 310
           T G GG S+A+  +DP+S   YS+ +++      GTQF+  PPRS
Sbjct: 301 TDGGGGVSSAM-FVDPNSGGYYSSNMTTSVFMPPGTQFYQNPPRS 322

[Close]

BLAST of Sed0014670 vs. ExPASy TrEMBL
Match: A0A0A0KGL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504650 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 7.8e-116
Identity = 240/340 (70.59%), Postives = 262/340 (77.06%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHP---ESLYWYKPGNIELWQQQQQQQ 60
           MS FFTLGG GGGR   D+E     + NRPN+  HP    SL+WYK GN+ELWQQQQQQQ
Sbjct: 1   MSGFFTLGGGGGGR---DEE----QNNNRPNQFIHPPPDSSLFWYKAGNVELWQQQQQQQ 60

Query: 61  QQQQHEEQVLFH-----HNMNHPHPVGGQRRGSDESSSRSGNFMI---GSGGGSGISCQD 120
               H+EQ LF           P+      R SDESSSRSGNFM+   GSGGG GISCQD
Sbjct: 61  HHHHHQEQPLFQTQSRTTTTTTPYSAPLAVRNSDESSSRSGNFMMISSGSGGG-GISCQD 120

Query: 121 CGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS---HNQQQP 180
           CGNQAKKDCSHMRCRTCCK+RGF C+THVKSTWVPAAKRRERQ+KL+ALQ+   H+ QQ 
Sbjct: 121 CGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHHHQQQ 180

Query: 181 LTTF-----PKRHRDY------------NNNISGLEIGNFPPELNSPAVFRCVRVSSTDE 240
           L        PKRHRDY            NNN SGLEIGNFP ELNSPAVFRCVRVSS D+
Sbjct: 181 LQLHGGDNNPKRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSADD 240

Query: 241 SDEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQPLNFIAGAGDA 300
           +D+QYAYQTAVNIGGHVFKGILYDQGPENNYI  GETSSGGGGSSSG+QPLNFIAGA DA
Sbjct: 241 TDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFIAGAADA 300

Query: 301 TTGSGGSSAALPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           TTGSGGS+AALPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 TTGSGGSTAALPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 331

[Close]

BLAST of Sed0014670 vs. ExPASy TrEMBL
Match: A0A5A7SN81 (Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001580 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 4.7e-113
Identity = 235/339 (69.32%), Postives = 257/339 (75.81%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHP---ESLYWYKPGNIELWQQQQQQQ 60
           MS FFTLGG GGGR       +   + NRPN+  HP    SL+WYK GN+ELW  QQQQQ
Sbjct: 1   MSGFFTLGGGGGGR-------EEEQNNNRPNQFIHPPPDSSLFWYKAGNVELW--QQQQQ 60

Query: 61  QQQQHEEQVLFH-----HNMNHPHPVGGQRRGSDESSSRSGNFMI---GSGGGSGISCQD 120
               H+EQ LF           P+      R SDESSSRSGNFM+   GSGGG GISCQD
Sbjct: 61  HHHHHQEQPLFQTQSRTTTTTTPYSAPLTVRNSDESSSRSGNFMMISSGSGGG-GISCQD 120

Query: 121 CGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS--HNQQQPL 180
           CGNQAKKDCSHMRCRTCCK+RGF C+THVKSTWVPAAKRRERQ+KL+ALQ+  H+QQQ L
Sbjct: 121 CGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQQL 180

Query: 181 TTF-----PKRHRDY------------NNNISGLEIGNFPPELNSPAVFRCVRVSSTDES 240
                   PKRHRDY            NNN SGLEIGNFP ELNSPAVFRCVRVSS D++
Sbjct: 181 QLHGGDNNPKRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSADDT 240

Query: 241 DEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQPLNFIAGAGDAT 300
           D+QYAYQTAVNIGGHVFKGILYDQGPENNYI  GETSSGGGGSSSG+QPLNFI GA D T
Sbjct: 241 DDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFITGAADTT 300

Query: 301 TGSGGSSAALPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           TGSGGS+AALPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 TGSGGSTAALPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 328

[Close]

BLAST of Sed0014670 vs. ExPASy TrEMBL
Match: A0A1S3B2J6 (protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103485098 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 4.7e-113
Identity = 235/339 (69.32%), Postives = 257/339 (75.81%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHP---ESLYWYKPGNIELWQQQQQQQ 60
           MS FFTLGG GGGR       +   + NRPN+  HP    SL+WYK GN+ELW  QQQQQ
Sbjct: 1   MSGFFTLGGGGGGR-------EEEQNNNRPNQFIHPPPDSSLFWYKAGNVELW--QQQQQ 60

Query: 61  QQQQHEEQVLFH-----HNMNHPHPVGGQRRGSDESSSRSGNFMI---GSGGGSGISCQD 120
               H+EQ LF           P+      R SDESSSRSGNFM+   GSGGG GISCQD
Sbjct: 61  HHHHHQEQPLFQTQSRTTTTTTPYSAPLTVRNSDESSSRSGNFMMISSGSGGG-GISCQD 120

Query: 121 CGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS--HNQQQPL 180
           CGNQAKKDCSHMRCRTCCK+RGF C+THVKSTWVPAAKRRERQ+KL+ALQ+  H+QQQ L
Sbjct: 121 CGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHHHQQQQL 180

Query: 181 TTF-----PKRHRDY------------NNNISGLEIGNFPPELNSPAVFRCVRVSSTDES 240
                   PKRHRDY            NNN SGLEIGNFP ELNSPAVFRCVRVSS D++
Sbjct: 181 QLHGGDNNPKRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVRVSSADDT 240

Query: 241 DEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQPLNFIAGAGDAT 300
           D+QYAYQTAVNIGGHVFKGILYDQGPENNYI  GETSSGGGGSSSG+QPLNFI GA D T
Sbjct: 241 DDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPGETSSGGGGSSSGVQPLNFITGAADTT 300

Query: 301 TGSGGSSAALPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           TGSGGS+AALPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 TGSGGSTAALPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 328

[Close]

BLAST of Sed0014670 vs. ExPASy TrEMBL
Match: A0A6J1GE84 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453153 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 5.1e-107
Identity = 230/330 (69.70%), Postives = 250/330 (75.76%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKPGNIELWQQQQQQQQQQ 60
           MS FF+LGG GG   +QD +    H  ++ N  T+PE+L+WYK GN+ELWQQQ    Q  
Sbjct: 1   MSGFFSLGG-GGREEHQDHQ---DHQEHQQNNDTNPETLFWYK-GNVELWQQQHHHHQHP 60

Query: 61  QHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNF-MIGSG-GGSGISCQDCGNQAKKDC 120
           Q +EQ LF      P+      R SDESSSRSGNF MIGSG GG GISCQDCGNQAKKDC
Sbjct: 61  Q-QEQPLFQTQSRTPYSAALPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDC 120

Query: 121 SHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS-HNQQQPLTTFPKRHRDY 180
            HMRCRTCCK+RGF C+THVKSTWVPAAKRRERQEKL+ALQ+ H         PKRHRDY
Sbjct: 121 VHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDY 180

Query: 181 N-------------NNISGLEIGNFPPELNSPAVFRCVRVSSTDESDEQYAYQTAVNIGG 240
           N             NN SGLEIGNFP ELNSPAVFRCVRVSSTDESD+QYAYQTAVNIGG
Sbjct: 181 NPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGG 240

Query: 241 HVFKGILYDQGPENNYIAAGETSS-----GGGGSSSGMQPLNFIAGAGDATTGSGGSSAA 300
           HVFKGILYDQGPE NYI   ETSS     GGGGSSSG+QPLNFI GA DATT SGGSSAA
Sbjct: 241 HVFKGILYDQGPETNYIPPAETSSGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAA 300

Query: 301 LPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           LPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 LPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 323

[Close]

BLAST of Sed0014670 vs. ExPASy TrEMBL
Match: A0A6J1IUW1 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478781 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.9e-106
Identity = 228/330 (69.09%), Postives = 247/330 (74.85%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKPGNIELWQQQQQQQQQQ 60
           MS FF+LGG G          +  H  ++ N  T+PE+L+WYK GN+ELWQQQQ     Q
Sbjct: 1   MSGFFSLGGGG----------REDHQDHQQNNDTNPETLFWYK-GNVELWQQQQHHHHPQ 60

Query: 61  QHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNF-MIGSG-GGSGISCQDCGNQAKKDC 120
           Q  EQ LF      P+      R SDESSSRSGNF MIGSG GG GISCQDCGNQAKKDC
Sbjct: 61  Q--EQPLFQTQSRIPYSAPLPVRTSDESSSRSGNFMMIGSGSGGGGISCQDCGNQAKKDC 120

Query: 121 SHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS-HNQQQPLTTFPKRHRDY 180
           +HMRCRTCCK+RGF C+THVKSTWVPAAKRRERQEKL+ALQ+ H         PKRHRDY
Sbjct: 121 AHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQEKLAALQTQHQLHLHGDNNPKRHRDY 180

Query: 181 N-------------NNISGLEIGNFPPELNSPAVFRCVRVSSTDESDEQYAYQTAVNIGG 240
           N             NN SGLEIGNFP ELNSPAVFRCVRVSSTDESD+QYAYQTAVNIGG
Sbjct: 181 NPTSSSSLACTLIPNNTSGLEIGNFPAELNSPAVFRCVRVSSTDESDDQYAYQTAVNIGG 240

Query: 241 HVFKGILYDQGPENNYIAAGETSS-----GGGGSSSGMQPLNFIAGAGDATTGSGGSSAA 300
           HVFKGILYDQGPE NYI   ETSS     GGGGSSSG+QPLNFI GA DATT SGGSSAA
Sbjct: 241 HVFKGILYDQGPETNYIPPAETSSGGGGGGGGGSSSGVQPLNFITGATDATTASGGSSAA 300

Query: 301 LPLLDPSSLYSTPLSSGYMAGTQFFIPPRS 310
           LPLLDPSSLYSTPL+S +MAGTQFF+PPRS
Sbjct: 301 LPLLDPSSLYSTPLNS-FMAGTQFFLPPRS 316

[Close]

BLAST of Sed0014670 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-66
Identity = 171/381 (44.88%), Postives = 226/381 (59.32%), Query Frame = 0


Query: 1   MSSFFTL-GGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKP--------------- 60
           M+ FF+L GG GGG G  + +     +TN P  ++  E+  WY+                
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVS--EAWLWYRNPNVNANANTNVNANA 60

Query: 61  --------GNIELWQQQQQQQ---QQQQHEEQVLFH------------HN---MNHPHPV 120
                   G +ELWQ   QQ+   Q QQH++++  +            HN   ++     
Sbjct: 61  PSSSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETST 120

Query: 121 GGQRRGSDESSSRSGNFMIGSGGGS-GISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTH 180
            G  R +     RSG    GSGGGS G+SCQDCGNQAKKDCSHMRCRTCCK+RGF C TH
Sbjct: 121 AGAGRAAAMMMIRSG----GSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTH 180

Query: 181 VKSTWVPAAKRRERQEKLSALQSHNQQQPLTTFPKRHRD----YNNNI--------SGLE 240
           V+STWVPAAKRRERQ++L+ +Q   Q     + PKRHR+     ++++        SGLE
Sbjct: 181 VRSTWVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLE 240

Query: 241 IGNFPPELNSPAVFRCVRVSSTDESDEQYAYQTAVNIGGHVFKGILYDQGPEN------N 300
           +GNFP E++S AVFRCVRVSS ++ +E++AYQTAV+IGGH+FKGILYD GP +      N
Sbjct: 241 VGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYN 300

Query: 301 YIAAGETSSGGGGSSSGMQPLNFI-------AGAGDATTGSGG----SSAALPLLDPSSL 310
            +AAGE+SSGGGG+    Q LN I       A A  +T   GG    S+AA   +DP++L
Sbjct: 301 VVAAGESSSGGGGA----QQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAAL 360

[Close]

BLAST of Sed0014670 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 229.6 bits (584), Expect = 3.5e-60
Identity = 159/350 (45.43%), Postives = 198/350 (56.57%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYK---------------PG 60
           M+ FF+LG  GGG    +       +TN P+  +  ES  W +                G
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRT----NTNNPSS-SGTESWLWCRNPNSNADGGEAGPSYKG 60

Query: 61  NIELWQQQQQQQ---QQQQHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNFMIGSGGG 120
            +ELWQ    Q+   QQQQ ++Q L  +       VG   R   E+S  +   M    G 
Sbjct: 61  TLELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGS 120

Query: 121 SGISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQSHN 180
            G SCQDCGNQ+KKDCSHMRCRTCCK+RG  C THVKSTWVPAAKRRERQ++LS  Q   
Sbjct: 121 GGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQ--Q 180

Query: 181 QQQPLTTFPKRHRDY--------------NNNISGLEIGNFPPELNSPAVFRCVRVSSTD 240
            QQ   + PKR R+               +NN SGLE+GNFPPE++S AVFRCVRVSS D
Sbjct: 181 PQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVD 240

Query: 241 ESDEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQPLNFIAGAGD 300
           + +E+YAY+TAV+IGGHVFKG+LYDQGP        E SS GGGS    QPLN I     
Sbjct: 241 DEEEEYAYKTAVSIGGHVFKGVLYDQGP-------AERSSSGGGS----QPLNLITAGPS 300

Query: 301 ATTGSGG--------SSAALPLLDPSSL-YSTPLSSGYMAGTQFFIPPRS 310
           A++ S           S +   +DP+SL Y TP+++ +M GT FF   RS
Sbjct: 301 ASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINT-FMTGTHFFSNSRS 331

[Close]

BLAST of Sed0014670 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 212.6 bits (540), Expect = 4.4e-55
Identity = 154/363 (42.42%), Postives = 199/363 (54.82%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQE----PQPPHHTNRPNEI-THPESLYWYKPGNIELW----- 60
           M+ FF LGG      N  Q+     +  HH ++ N +  + + +Y    G  E+W     
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKG-FEIWPPQYF 60

Query: 61  QQQQQQQQQQQHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNFMIGSG---GG----- 120
           QQQ+ QQQQQQ +      +  +      G    ++ + SRS  F + S    GG     
Sbjct: 61  QQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTR 120

Query: 121 -SGISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQSH 180
             G++CQDCGNQAKKDC HMRCRTCCK+RGF CQTHVKSTWVPAAKRRER  +L++LQ H
Sbjct: 121 QGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHH 180

Query: 181 NQQQPLTTFPKRHRDYN--------------------------NNISGLEIG-NFPPELN 240
           +     T   KR R+ +                          N+ SGLE+  + PPE+N
Sbjct: 181 SASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVN 240

Query: 241 SPAVFRCVRVSS--TDESDEQYAYQTAVNIGGHVFKGILYDQGPEN------NYIAAGET 300
           SPA+FRCVRVSS   DE D+ YAYQTAVNIGGH+FKGILYDQGPE+      N +A+  T
Sbjct: 241 SPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHLNLLASTAT 300

Query: 301 SSGGGGSSSGMQPLNFIAGAGDATTGSGGSSAALPLLDPSSLYSTPLSSGYMAGTQFFIP 310
           ++            N    A    TG+  +     +LDPSSLY   L+S ++AGT FF P
Sbjct: 301 TT------------NVEETATKTVTGNNNNGL---MLDPSSLYPAQLNS-FIAGTPFFTP 346

[Close]

BLAST of Sed0014670 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-48
Identity = 142/345 (41.16%), Postives = 192/345 (55.65%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKP-GNIELWQQQQQQQQQ 60
           M+  F+LGG+    G++++E Q    TN            WY+   N         QQ  
Sbjct: 1   MAGIFSLGGNNNNNGDEEEENQQQQKTN----------WVWYRSNANTNNINPSSSQQVW 60

Query: 61  QQHEEQVLFHHNMNHPHPVGGQRRGSD--ESSSRSGNFMIGSGGGSGISCQDCGNQAKKD 120
           Q   EQ+L HH   H HP   Q++  D         + +  S     ISC+DCGNQAKKD
Sbjct: 61  QIPPEQMLMHH---HSHP---QQQSLDLYPGHQIDVSDLATSSRSITISCRDCGNQAKKD 120

Query: 121 CSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKL--------SALQSHNQQQPLTT 180
           C+HMRCRTCCK+RGF C THV+STW+P A+RRERQ++L            S       ++
Sbjct: 121 CTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGGAGGGGSS 180

Query: 181 FPKRHRD-----------YNNNISGLEIG--NFPPELNSPAVFRCVRVSSTDE-SDEQYA 240
            PKRHRD             ++ +GLE+G  +FP E++S A+FRCV++S  D+  D QYA
Sbjct: 181 IPKRHRDPTLPGTSSSSRLPSHSAGLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYA 240

Query: 241 YQTAVNIGGHVFKGILYDQGPENNYIAAG------ETSSGGGGSSSGMQPLNFIAGAGDA 300
           YQT VNIGGH+FKGILYDQGPE++Y++ G      ++SS GGG   G  P N        
Sbjct: 241 YQTTVNIGGHLFKGILYDQGPESSYMSGGSGGSDHQSSSAGGG--GGGHPFN----PPVV 300

Query: 301 TTGSGGSSAALPLLDPSS--LYSTPLSSGYM--AGTQFF-IPPRS 310
           T G GG S+A+  +DP+S   YS+ +++      GTQF+  PPRS
Sbjct: 301 TDGGGGVSSAM-FVDPNSGGYYSSNMTTSVFMPPGTQFYQNPPRS 322

[Close]

BLAST of Sed0014670 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 183.3 bits (464), Expect = 2.9e-46
Identity = 142/355 (40.00%), Postives = 181/355 (50.99%), Query Frame = 0


Query: 1   MSSFFTLGGSGGGRGNQDQEPQPPHHTNRPNEITHPESLYWYKP------GNIELWQQQQ 60
           M+  F LGG       +D   Q  H     NE      LY YK          E++  Q 
Sbjct: 1   MAGLFYLGG-------RDHNKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQY 60

Query: 61  QQQQQQQHEEQVLFHHNMNHPHPVGGQRRGSDESSSRSGNFMI--------GSGGG---- 120
            QQQQQQ+      +       P GG    ++ S++RS  F +         S GG    
Sbjct: 61  FQQQQQQNHAAAPTNLYSFGMVPSGG-NINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVT 120

Query: 121 --SGISCQDCGNQAKKDCSHMRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQEKLSALQS 180
               ++CQDCGNQAKKDC HMRCRTCCK+RGF CQTHVKSTWV AAKRRERQ +L+ L +
Sbjct: 121 RQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPA 180

Query: 181 HNQQQPLTTFPKRHRD----------------------YNNNISGLEIGNFPPELNSPAV 240
              +   +       D                       N + SGLE  + PPE++SPAV
Sbjct: 181 KRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAV 240

Query: 241 FRCVRVSSTDESDEQYAYQTAVNIGGHVFKGILYDQGPENNYIAAGETSSGGGGSSSGMQ 300
           FRC+RVSS D+ DE+YAYQTAV+IGGHVFKGILYDQGP +++      SS   G +S   
Sbjct: 241 FRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH---HRYSSSLNGETSHQH 300

Query: 301 PLNFIAGAGDATTGSGGSSAAL--PLLDPSSLY---STPLSSGYMAGTQFFIPPR 309
            LN +     A T +  ++       +DPSSLY   +TP ++    GT FF   R
Sbjct: 301 HLNLMDSTPSAATTNAVTAVNTNNGSIDPSSLYTAVATPFNAFVAGGTPFFASSR 344

The following BLAST results are available for this feature:

BLAST of Sed0014670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149998.1	1.6e-115	70.59	protein SHI RELATED SEQUENCE 1 [Cucumis sativus] >KGN48885.1 hypothetical protei...	[more]
XP_008440782.1	9.7e-113	69.32	PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo] >KAA0025701.1 protein S...	[more]
KAG6603931.1	4.2e-108	68.88	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543255.1	2.1e-107	69.18	protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949893.1	1.0e-106	69.70	protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata] >XP_022949894.1 protein...	[more]

BLAST of Sed0014670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD40	2.1e-65	44.88	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	4.9e-59	45.43	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
K4B6C9	1.4e-58	44.26	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9LQZ5	6.2e-54	42.42	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
O65517	1.9e-47	41.16	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]

BLAST of Sed0014670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGL4	7.8e-116	70.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504650 PE=3 SV=1	[more]
A0A5A7SN81	4.7e-113	69.32	Protein SHI RELATED SEQUENCE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B2J6	4.7e-113	69.32	protein SHI RELATED SEQUENCE 1 OS=Cucumis melo OX=3656 GN=LOC103485098 PE=3 SV=1	[more]
A0A6J1GE84	5.1e-107	69.70	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145315...	[more]
A0A6J1IUW1	1.9e-106	69.09	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478781 ...	[more]

BLAST of Sed0014670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	1.5e-66	44.88	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	3.5e-60	45.43	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	4.4e-55	42.42	SHI-related sequence 5	[more]
AT4G36260.1	1.4e-48	41.16	Lateral root primordium (LRP) protein-related	[more]
AT1G19790.1	2.9e-46	40.00	SHI-related sequence 7	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 106..148 e-value: 3.9E-26 score: 88.7
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 189..236 e-value: 1.2E-26 score: 90.4
None	No IPR available	PFAM	PF05142	DUF702	coord: 104..237 e-value: 8.7E-62 score: 208.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..97
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..305
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014670.1	Sed0014670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding