Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGGTTACAACCAAGGAGGAGAGGTCCAGAGTGGAAGCAAGGATGGGCAGGCCAAACCCTAAATTCTGTTTCTTCCCCACCACCTCAATTGCTAACAATTTTTGGCATTGTCATTGTCCTTCTTTGCTTCTCTCAGAACAAAGGCCATGAAGCTCAAATGTATAGGTCAGCTGCCAATTTTCAGCTGGCTCTTTTCTTGTTGCCCATTTTGGTAATTTTTGTCATGTCTTCATATTCCCTCGGTGGACTGTTTAACTTTCGATTTCGGCAACTGGCCACCAGGTCGACTCGACGAGGTGCCTCACCTTGGACCATTGCCATTTTGGTCCCTCTCATTCTGGTTTTGCTTTATTTCCAACCCTCGTTCCATTGA
mRNA sequence
ATGGAGTGGTTACAACCAAGGAGGAGAGGTCCAGAGTGGAAGCAAGGATGGGCAGGCCAAACCCTAAATTCTGTTTCTTCCCCACCACCTCAATTGCTAACAATTTTTGGCATTGTCATTGTCCTTCTTTGCTTCTCTCAGAACAAAGGCCATGAAGCTCAAATGTATAGGTCAGCTGCCAATTTTCAGCTGGCTCTTTTCTTGTTGCCCATTTTGGTAATTTTTGTCATGTCTTCATATTCCCTCGGTGGACTGTTTAACTTTCGATTTCGGCAACTGGCCACCAGGTCGACTCGACGAGGTGCCTCACCTTGGACCATTGCCATTTTGGTCCCTCTCATTCTGGTTTTGCTTTATTTCCAACCCTCGTTCCATTGA
Coding sequence (CDS)
ATGGAGTGGTTACAACCAAGGAGGAGAGGTCCAGAGTGGAAGCAAGGATGGGCAGGCCAAACCCTAAATTCTGTTTCTTCCCCACCACCTCAATTGCTAACAATTTTTGGCATTGTCATTGTCCTTCTTTGCTTCTCTCAGAACAAAGGCCATGAAGCTCAAATGTATAGGTCAGCTGCCAATTTTCAGCTGGCTCTTTTCTTGTTGCCCATTTTGGTAATTTTTGTCATGTCTTCATATTCCCTCGGTGGACTGTTTAACTTTCGATTTCGGCAACTGGCCACCAGGTCGACTCGACGAGGTGCCTCACCTTGGACCATTGCCATTTTGGTCCCTCTCATTCTGGTTTTGCTTTATTTCCAACCCTCGTTCCATTGA
Protein sequence
MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRRGASPWTIAILVPLILVLLYFQPSFH
Homology
BLAST of Sed0014638 vs. NCBI nr
Match:
KAG7010871.1 (hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 180.6 bits (457), Expect = 8.1e-42
Identity = 96/127 (75.59%), Postives = 106/127 (83.46%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTL-NSVSSPPPQLLTIFGIVIVLLCFSQN-KGHEAQMYRS 60
MEWL+P+RRGPEWKQ W GQTL SVSSPPPQLLTIFGIVIVLL FSQ+ G++ QM+RS
Sbjct: 1 MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRS 60
Query: 61 AANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRRGASPWTIAILVPLILVLL 120
A+NFQL LFLLPILVIF MSSYS+ GL N R + AT S RRGASP TI ILV LILVLL
Sbjct: 61 ASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTITILVSLILVLL 120
Query: 121 YFQPSFH 126
YF+PSFH
Sbjct: 121 YFRPSFH 127
BLAST of Sed0014638 vs. NCBI nr
Match:
KAF3434655.1 (hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis])
HSP 1 Score: 150.2 bits (378), Expect = 1.2e-32
Identity = 77/126 (61.11%), Postives = 94/126 (74.60%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAA 60
MEW P+RRGPEWKQGW GQTL S+S+PP LLTIFGIVIVLL FSQ G++AQ+ ++
Sbjct: 1 MEWFYPKRRGPEWKQGWTGQTLTSISAPPLHLLTIFGIVIVLLWFSQYTGYKAQLQQTTV 60
Query: 61 NFQLALFLLPILVIFVMSSY-SLGGLFNFRFRQLATRSTRRGASPWTIAILVPLILVLLY 120
NFQL L +LPIL+IF M+ Y S GG FNF+ R+ R G SPW +AIL+ L+LVLL
Sbjct: 61 NFQLFLMVLPILLIFFMALYSSSGGWFNFQLRR-PEAFHRAGGSPWGVAILLVLLLVLLS 120
Query: 121 FQPSFH 126
+Q SFH
Sbjct: 121 YQSSFH 125
BLAST of Sed0014638 vs. NCBI nr
Match:
KGN61894.1 (hypothetical protein Csa_005908 [Cucumis sativus])
HSP 1 Score: 150.2 bits (378), Expect = 1.2e-32
Identity = 87/128 (67.97%), Postives = 95/128 (74.22%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQG--WAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQ-NKGHEAQMYR 60
M+ P+RRGPEWK+G GQTL+SVS PP QLL IFGIVIVLL FSQ N GHEAQ+ R
Sbjct: 1 MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNR 60
Query: 61 SAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRRGASPWTIAILVPLILVL 120
S FQL LFLLPI VIF M SYS L NF FR+ T +RGASPWTIAILV LILVL
Sbjct: 61 S---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAILVLLILVL 120
Query: 121 LYFQPSFH 126
LY+Q SFH
Sbjct: 121 LYYQSSFH 125
BLAST of Sed0014638 vs. NCBI nr
Match:
KDP27587.1 (hypothetical protein JCGZ_19592 [Jatropha curcas])
HSP 1 Score: 148.7 bits (374), Expect = 3.4e-32
Identity = 74/127 (58.27%), Postives = 94/127 (74.02%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAA 60
MEW P+RRGP+WKQGWAGQT+NS+S+PPP LLTIFGIVI+LL SQ G++AQ+ SA
Sbjct: 1 MEWFYPKRRGPDWKQGWAGQTMNSISTPPPSLLTIFGIVILLLWLSQYTGYKAQLRHSAI 60
Query: 61 NFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTR--RGASPWTIAILVPLILVLL 120
NFQL +FLLPIL+I +++ S + FR RQ S R G+SPW +AI V ++LVLL
Sbjct: 61 NFQLFIFLLPILLILLLACSSTNWMLYFRHRQPQPDSARPDSGSSPWGMAIFVVVLLVLL 120
Query: 121 YFQPSFH 126
+Q SFH
Sbjct: 121 SYQSSFH 127
BLAST of Sed0014638 vs. NCBI nr
Match:
KAB2051186.1 (hypothetical protein ES319_A12G039100v1 [Gossypium barbadense] >PPS17821.1 hypothetical protein GOBAR_AA02742 [Gossypium barbadense])
HSP 1 Score: 145.2 bits (365), Expect = 3.8e-31
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAA 60
MEWL PRRRGP+WKQGW+GQTL S+SSPP L+TIFGIV+VLL FSQ + A ++ SA
Sbjct: 26 MEWLYPRRRGPQWKQGWSGQTLPSMSSPPLPLVTIFGIVLVLLWFSQYADYRAHLHNSAI 85
Query: 61 NFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRRG-ASPWTIAILVPLILVLLY 120
NFQL L LLP+L++F M S+S G F F R+L + SPW IA+LV L+ VLL+
Sbjct: 86 NFQLFLILLPVLLVFFMVSFSSSGRFAFWQRRLGRHTVHPSRGSPWGIAVLVGLLFVLLF 145
Query: 121 FQPSFH 126
+Q SFH
Sbjct: 146 YQSSFH 151
BLAST of Sed0014638 vs. ExPASy TrEMBL
Match:
A0A0A0LLH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263890 PE=4 SV=1)
HSP 1 Score: 150.2 bits (378), Expect = 5.7e-33
Identity = 87/128 (67.97%), Postives = 95/128 (74.22%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQG--WAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQ-NKGHEAQMYR 60
M+ P+RRGPEWK+G GQTL+SVS PP QLL IFGIVIVLL FSQ N GHEAQ+ R
Sbjct: 1 MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNR 60
Query: 61 SAANFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRRGASPWTIAILVPLILVL 120
S FQL LFLLPI VIF M SYS L NF FR+ T +RGASPWTIAILV LILVL
Sbjct: 61 S---FQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAILVLLILVL 120
Query: 121 LYFQPSFH 126
LY+Q SFH
Sbjct: 121 LYYQSSFH 125
BLAST of Sed0014638 vs. ExPASy TrEMBL
Match:
A0A067JUL1 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19592 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 1.7e-32
Identity = 74/127 (58.27%), Postives = 94/127 (74.02%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAA 60
MEW P+RRGP+WKQGWAGQT+NS+S+PPP LLTIFGIVI+LL SQ G++AQ+ SA
Sbjct: 1 MEWFYPKRRGPDWKQGWAGQTMNSISTPPPSLLTIFGIVILLLWLSQYTGYKAQLRHSAI 60
Query: 61 NFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTR--RGASPWTIAILVPLILVLL 120
NFQL +FLLPIL+I +++ S + FR RQ S R G+SPW +AI V ++LVLL
Sbjct: 61 NFQLFIFLLPILLILLLACSSTNWMLYFRHRQPQPDSARPDSGSSPWGMAIFVVVLLVLL 120
Query: 121 YFQPSFH 126
+Q SFH
Sbjct: 121 SYQSSFH 127
BLAST of Sed0014638 vs. ExPASy TrEMBL
Match:
A0A2P5YQK7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G039100v1 PE=4 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31
Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAA 60
MEWL PRRRGP+WKQGW+GQTL S+SSPP L+TIFGIV+VLL FSQ + A ++ SA
Sbjct: 26 MEWLYPRRRGPQWKQGWSGQTLPSMSSPPLPLVTIFGIVLVLLWFSQYADYRAHLHNSAI 85
Query: 61 NFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRRG-ASPWTIAILVPLILVLLY 120
NFQL L LLP+L++F M S+S G F F R+L + SPW IA+LV L+ VLL+
Sbjct: 86 NFQLFLILLPVLLVFFMVSFSSSGRFAFWQRRLGRHTVHPSRGSPWGIAVLVGLLFVLLF 145
Query: 121 FQPSFH 126
+Q SFH
Sbjct: 146 YQSSFH 151
BLAST of Sed0014638 vs. ExPASy TrEMBL
Match:
A0A1Q3DG80 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34892 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 2.4e-31
Identity = 69/126 (54.76%), Postives = 95/126 (75.40%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAA 60
MEW +RRGPEWKQGW GQT+ S+S+PP LLT+FGIVIVLL SQ + +Q++ +A
Sbjct: 1 MEWFYTKRRGPEWKQGWTGQTVASISTPPAALLTVFGIVIVLLLLSQYTQYNSQLHHTAT 60
Query: 61 NFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR-GASPWTIAILVPLILVLLY 120
NF+L++FLLPIL+IF M+++S G +NF+ ++ + +R G SPW +AILV L+LVLL
Sbjct: 61 NFKLSIFLLPILLIFFMAAFSSSGRYNFQLPRIGHGAMQRAGGSPWGLAILVLLVLVLLS 120
Query: 121 FQPSFH 126
+Q SFH
Sbjct: 121 YQSSFH 126
BLAST of Sed0014638 vs. ExPASy TrEMBL
Match:
A0A6P6AE81 (uncharacterized protein LOC111308773 OS=Durio zibethinus OX=66656 GN=LOC111308773 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 2.4e-31
Identity = 73/126 (57.94%), Postives = 94/126 (74.60%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAA 60
MEW+ PRRRGP+WKQGW GQTL+SVS+PP LLTIFGIV+VLL SQ G++A+++ +A
Sbjct: 1 MEWVYPRRRGPQWKQGWTGQTLSSVSAPPIPLLTIFGIVVVLLWLSQYTGYKARLHHTAI 60
Query: 61 NFQLALFLLPILVIFVMSSYSLGGLFNFRFRQLATRSTRR-GASPWTIAILVPLILVLLY 120
NFQL + +LPIL+IF M S+S G F ++L + R G SPW IAILV ++LVLL
Sbjct: 61 NFQLFIIILPILLIFFMISFSSSGRLAFWQQRLEHETVHRSGGSPWGIAILVGVLLVLLC 120
Query: 121 FQPSFH 126
+Q SFH
Sbjct: 121 YQSSFH 126
BLAST of Sed0014638 vs. TAIR 10
Match:
AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 75.1 bits (183), Expect = 4.5e-14
Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 0
Query: 1 MEWLQPRRRGPEWKQGWAGQTLNSVSSPPPQLLTIFGIVIVLLCFSQNKGHEAQMYRSAA 60
M W RRG WK+GW +TL + S+PP LL + I+ +LL S ++ ++ ++AA
Sbjct: 1 MGWFIKERRGGSWKRGWLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAA 60
Query: 61 NFQLALFLLPILVIFVMSSYSLGG--LFNFRFRQLATRSTR---RGASPWTIAILVPLIL 120
N +L + LPIL +FV+ S S LF + A ++ G PW + +++ L+L
Sbjct: 61 NLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLILLL 120
Query: 121 VLLYFQPSFH 126
+L+ Q FH
Sbjct: 121 LLVSKQSYFH 130
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7010871.1 | 8.1e-42 | 75.59 | hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAF3434655.1 | 1.2e-32 | 61.11 | hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis] | [more] |
KGN61894.1 | 1.2e-32 | 67.97 | hypothetical protein Csa_005908 [Cucumis sativus] | [more] |
KDP27587.1 | 3.4e-32 | 58.27 | hypothetical protein JCGZ_19592 [Jatropha curcas] | [more] |
KAB2051186.1 | 3.8e-31 | 57.94 | hypothetical protein ES319_A12G039100v1 [Gossypium barbadense] >PPS17821.1 hypot... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LLH8 | 5.7e-33 | 67.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263890 PE=4 SV=1 | [more] |
A0A067JUL1 | 1.7e-32 | 58.27 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19592 PE=4 SV=1 | [more] |
A0A2P5YQK7 | 1.8e-31 | 57.94 | Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G039100v1 PE... | [more] |
A0A1Q3DG80 | 2.4e-31 | 54.76 | Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34892 PE=4... | [more] |
A0A6P6AE81 | 2.4e-31 | 57.94 | uncharacterized protein LOC111308773 OS=Durio zibethinus OX=66656 GN=LOC11130877... | [more] |
Match Name | E-value | Identity | Description | |
AT5G42146.1 | 4.5e-14 | 33.85 | unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac... | [more] |