Sed0014576 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACGCAAACAGCGTGAGTAAACTTTTTCAGTTTCTTTTTCTTTGTTTGCACGAAACTTGCGTTTCAAGCGAAAATGGAAAAGCAGAGCCTGCCGGCGCCGGCTCCGGAGGTGGCGACCGTCGCCGCCGACGGCGAGGAGGAGATGAAGATGGAGACGTTTTTCGCTCTGATTAGGAATTTCAAGGAAATGCGTGATCGGCGGAGGGAGGAGTTGATGATCGGGTGCGAATCGGCGGCGGAGAAGAAGAGGAAGAAGATGACGACGGTGCCGAATCGGTCCACGTGGATTCCGAGGTTTGAGATGGAGGATTTTGAGGAGGATTTTCCGGTGAGAGGACCGGCGAAGGAAGAGACGCCGGCGATGATGATGGAGAAGAAGAAGACGAAAGTGGAAAGTGGAGAGGATTGTTTGGATCTTAATCTTGCTCTCTAA ACGCAAACAGCGTGAGTAAACTTTTTCAGTTTCTTTTTCTTTGTTTGCACGAAACTTGCGTTTCAAGCGAAAATGGAAAAGCAGAGCCTGCCGGCGCCGGCTCCGGAGGTGGCGACCGTCGCCGCCGACGGCGAGGAGGAGATGAAGATGGAGACGTTTTTCGCTCTGATTAGGAATTTCAAGGAAATGCGTGATCGGCGGAGGGAGGAGTTGATGATCGGGTGCGAATCGGCGGCGGAGAAGAAGAGGAAGAAGATGACGACGGTGCCGAATCGGTCCACGTGGATTCCGAGGTTTGAGATGGAGGATTTTGAGGAGGATTTTCCGGTGAGAGGACCGGCGAAGGAAGAGACGCCGGCGATGATGATGGAGAAGAAGAAGACGAAAGTGGAAAGTGGAGAGGATTGTTTGGATCTTAATCTTGCTCTCTAA ATGGAAAAGCAGAGCCTGCCGGCGCCGGCTCCGGAGGTGGCGACCGTCGCCGCCGACGGCGAGGAGGAGATGAAGATGGAGACGTTTTTCGCTCTGATTAGGAATTTCAAGGAAATGCGTGATCGGCGGAGGGAGGAGTTGATGATCGGGTGCGAATCGGCGGCGGAGAAGAAGAGGAAGAAGATGACGACGGTGCCGAATCGGTCCACGTGGATTCCGAGGTTTGAGATGGAGGATTTTGAGGAGGATTTTCCGGTGAGAGGACCGGCGAAGGAAGAGACGCCGGCGATGATGATGGAGAAGAAGAAGACGAAAGTGGAAAGTGGAGAGGATTGTTTGGATCTTAATCTTGCTCTCTAA MEKQSLPAPAPEVATVAADGEEEMKMETFFALIRNFKEMRDRRREELMIGCESAAEKKRKKMTTVPNRSTWIPRFEMEDFEEDFPVRGPAKEETPAMMMEKKKTKVESGEDCLDLNLAL Homology
BLAST of Sed0014576 vs. NCBI nr
Match: KAG6593261.1 (hypothetical protein SDJN03_12737, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.8 bits (364), Expect = 4.7e-31 Identity = 81/127 (63.78%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of Sed0014576 vs. NCBI nr
Match: KAG7025612.1 (hypothetical protein SDJN02_12109, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30 Identity = 81/129 (62.79%), Postives = 95/129 (73.64%), Query Frame = 0
BLAST of Sed0014576 vs. NCBI nr
Match: XP_023514605.1 (protein NIM1-INTERACTING 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 142.1 bits (357), Expect = 3.0e-30 Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 0
BLAST of Sed0014576 vs. NCBI nr
Match: XP_022960173.1 (protein NIM1-INTERACTING 1 [Cucurbita moschata]) HSP 1 Score: 140.6 bits (353), Expect = 8.9e-30 Identity = 82/131 (62.60%), Postives = 97/131 (74.05%), Query Frame = 0
BLAST of Sed0014576 vs. NCBI nr
Match: XP_023004697.1 (protein NIM1-INTERACTING 1 [Cucurbita maxima]) HSP 1 Score: 132.1 bits (331), Expect = 3.2e-27 Identity = 77/127 (60.63%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Sed0014576 vs. ExPASy Swiss-Prot
Match: Q9FNZ5 (Protein NIM1-INTERACTING 1 OS=Arabidopsis thaliana OX=3702 GN=NIMIN-1 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 3.5e-05 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 0
BLAST of Sed0014576 vs. ExPASy TrEMBL
Match: A0A6J1H831 (protein NIM1-INTERACTING 1 OS=Cucurbita moschata OX=3662 GN=LOC111460992 PE=3 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 4.3e-30 Identity = 82/131 (62.60%), Postives = 97/131 (74.05%), Query Frame = 0
BLAST of Sed0014576 vs. ExPASy TrEMBL
Match: A0A6J1KR57 (protein NIM1-INTERACTING 1 OS=Cucurbita maxima OX=3661 GN=LOC111497915 PE=3 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27 Identity = 77/127 (60.63%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Sed0014576 vs. ExPASy TrEMBL
Match: A0A6J1DAZ5 (protein NIM1-INTERACTING 1 OS=Momordica charantia OX=3673 GN=LOC111019022 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 8.1e-21 Identity = 72/134 (53.73%), Postives = 84/134 (62.69%), Query Frame = 0
BLAST of Sed0014576 vs. ExPASy TrEMBL
Match: A0A6J1JVD5 (uncharacterized protein LOC111488189 OS=Cucurbita maxima OX=3661 GN=LOC111488189 PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 7.6e-19 Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of Sed0014576 vs. ExPASy TrEMBL
Match: A0A0A0K5V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414420 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 5.1e-15 Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 0
BLAST of Sed0014576 vs. TAIR 10
Match: AT1G02450.1 (NIM1-interacting 1 ) HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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