Sed0014542 (gene) Chayote v1

Overview
NameSed0014542
Typegene
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
LocationLG06: 10942687 .. 10943709 (-)
RNA-Seq ExpressionSed0014542
SyntenySed0014542
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCCAGCACAGTTTGCTCAAATGATGGAAAATCTAGACCTTAACGATCAAGAAGCACAAGAAATCTTTGAACTTGAAGAAGAAGATGTGGTAGCTTATGAAAGTGAACTTGAAGGGGTGCTGGCGTGCAAAATTCTCTCTAGCAATCAGATTAGTTCAGATGTGTTCAAGAAGGTTGTCCCAAAAATATGGAATATGGAAAATAAAGTGAGTATAGAAGCGGTAGGTGTAAACACTTTTATCTGCACATTTGAAAACAAAGTGTTCAGGGACAGAGTCCTAATGGCAAGTCTGTAGATCTATGACGATGCGGTGATATTGTTCGAGGCAATGGCAGGGGATAAACGAGTTTCGGAGATGGAGTTCGCATTTGGAGATTTTTGGGTCAGACTGCACGATGTGCCTCCAGCGTGTCATACAGGAAACAATGCAAGGAAACTAGGAAGTATGTTAGGGAAGTTCATAGGATGGGATTGTGATGGAGATAAAAGGAACAGAGGAAAATTTTTAAGGCTCAAAATTGCAATCGATGTTCGTAGACCTTTGAGAAGGGCGTTGAAGTTAAAAAGCGGAGTGATGGTGGCTGAGAAATGGGTAAGATTATCGTATGAAAAACTTTCGTTCTTCTGTCGTGGATGTGGAAGAATAGGCCACAGGGCCTCTGATTGTAACTTCGTTGCGATTGGAGAGAGTATTCCGTTCCCTTTTGGGGAAGATTTGAGAGAACCATATGGATTTTCTAGGGGAGATTCAGGGTCGTCGAATAGATTTTCTGGGAGAGGAAGGGGTCGTGGAAGAGGAAGAGGGGAGGTATCTCGCAGCGAGGATGGTGGTTATTTTGAGAAAGGAGTCGAGTCGAAATCGATCGAAGGTGGGAGAAGAGAGGAAGCTAGGGGGAACTTGAGTTTTCCGGCAGAGGGGCGACACCTTTTTGCAAGTAACGAGTCGCCGGAGACGGCCTTGGGAGAAGGGGAGGGAAATGAGGAAGGTCGTCAGAAGTTGCAGGAGTTTGTCTCATGA

mRNA sequence

ATGGACCCAGCACAGTTTGCTCAAATGATGGAAAATCTAGACCTTAACGATCAAGAAGCACAAGAAATCTTTGAACTTGAAGAAGAAGATGTGGTAGCTTATGAAAGTGAACTTGAAGGGGTGCTGGCGTGCAAAATTCTCTCTAGCAATCAGATTAGTTCAGATGTGTTCAAGAAGGTTGTCCCAAAAATATGGAATATGGAAAATAAAATCTATGACGATGCGGTGATATTGTTCGAGGCAATGGCAGGGGATAAACGAGTTTCGGAGATGGAGTTCGCATTTGGAGATTTTTGGGTCAGACTGCACGATGTGCCTCCAGCGTGTCATACAGGAAACAATGCAAGGAAACTAGGAAGTATGTTAGGGAAGTTCATAGGATGGGATTGTGATGGAGATAAAAGGAACAGAGGAAAATTTTTAAGGCTCAAAATTGCAATCGATGTTCGTAGACCTTTGAGAAGGGCGTTGAAGTTAAAAAGCGGAGTGATGGTGGCTGAGAAATGGGTAAGATTATCGTATGAAAAACTTTCGTTCTTCTGTCGTGGATGTGGAAGAATAGGCCACAGGGCCTCTGATTGTAACTTCGTTGCGATTGGAGAGAGTATTCCGTTCCCTTTTGGGGAAGATTTGAGAGAACCATATGGATTTTCTAGGGGAGATTCAGGGTCGTCGAATAGATTTTCTGGGAGAGGAAGGGGTCGTGGAAGAGGAAGAGGGGAGGTATCTCGCAGCGAGGATGGTGGTTATTTTGAGAAAGGAGTCGAGTCGAAATCGATCGAAGGTGGGAGAAGAGAGGAAGCTAGGGGGAACTTGAGTTTTCCGGCAGAGGGGCGACACCTTTTTGCAAGTAACGAGTCGCCGGAGACGGCCTTGGGAGAAGGGGAGGGAAATGAGGAAGGTCGTCAGAAGTTGCAGGAGTTTGTCTCATGA

Coding sequence (CDS)

ATGGACCCAGCACAGTTTGCTCAAATGATGGAAAATCTAGACCTTAACGATCAAGAAGCACAAGAAATCTTTGAACTTGAAGAAGAAGATGTGGTAGCTTATGAAAGTGAACTTGAAGGGGTGCTGGCGTGCAAAATTCTCTCTAGCAATCAGATTAGTTCAGATGTGTTCAAGAAGGTTGTCCCAAAAATATGGAATATGGAAAATAAAATCTATGACGATGCGGTGATATTGTTCGAGGCAATGGCAGGGGATAAACGAGTTTCGGAGATGGAGTTCGCATTTGGAGATTTTTGGGTCAGACTGCACGATGTGCCTCCAGCGTGTCATACAGGAAACAATGCAAGGAAACTAGGAAGTATGTTAGGGAAGTTCATAGGATGGGATTGTGATGGAGATAAAAGGAACAGAGGAAAATTTTTAAGGCTCAAAATTGCAATCGATGTTCGTAGACCTTTGAGAAGGGCGTTGAAGTTAAAAAGCGGAGTGATGGTGGCTGAGAAATGGGTAAGATTATCGTATGAAAAACTTTCGTTCTTCTGTCGTGGATGTGGAAGAATAGGCCACAGGGCCTCTGATTGTAACTTCGTTGCGATTGGAGAGAGTATTCCGTTCCCTTTTGGGGAAGATTTGAGAGAACCATATGGATTTTCTAGGGGAGATTCAGGGTCGTCGAATAGATTTTCTGGGAGAGGAAGGGGTCGTGGAAGAGGAAGAGGGGAGGTATCTCGCAGCGAGGATGGTGGTTATTTTGAGAAAGGAGTCGAGTCGAAATCGATCGAAGGTGGGAGAAGAGAGGAAGCTAGGGGGAACTTGAGTTTTCCGGCAGAGGGGCGACACCTTTTTGCAAGTAACGAGTCGCCGGAGACGGCCTTGGGAGAAGGGGAGGGAAATGAGGAAGGTCGTCAGAAGTTGCAGGAGTTTGTCTCATGA

Protein sequence

MDPAQFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKVVPKIWNMENKIYDDAVILFEAMAGDKRVSEMEFAFGDFWVRLHDVPPACHTGNNARKLGSMLGKFIGWDCDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGVMVAEKWVRLSYEKLSFFCRGCGRIGHRASDCNFVAIGESIPFPFGEDLREPYGFSRGDSGSSNRFSGRGRGRGRGRGEVSRSEDGGYFEKGVESKSIEGGRREEARGNLSFPAEGRHLFASNESPETALGEGEGNEEGRQKLQEFVS
Homology
BLAST of Sed0014542 vs. NCBI nr
Match: TXG54199.1 (hypothetical protein EZV62_019455 [Acer yangbiense])

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-21
Identity = 59/190 (31.05%), Postives = 106/190 (55.79%), Query Frame = 0

Query: 5   QFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKVVPKI 64
           + A++ ENL L +++   + E  EE  +  E +++  L  K+LS  +++ + FK ++ +I
Sbjct: 2   ELAKLYENLSLAEEDG-ALHECSEEVKIDGEKDVDRCLVGKVLSGKKVNREAFKGLIEQI 61

Query: 65  WNMENKIYDDAVILFEAMAGDKRVSEMEFAFGDFWVRLHDVPPACHTGNNARKLGSMLGK 124
           WN    +  D ++L E   G   +S ++F   DFW+++H++P  C     A+ L   +G+
Sbjct: 62  WNPYGNVEVDLIVL-EIPEGPGNISHLKFNKADFWIQIHEIPIMCMNRRIAKWLAEQIGE 121

Query: 125 FIGWDCDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGVMVAEKWVRLSYEKLSFFCRGC 184
            +    +  +   G+FLR+K+ ID+ +PL+R L+LK G       V L YE++  FC  C
Sbjct: 122 VVEIPSE-SRECWGRFLRVKVRIDISKPLKRWLRLKLGKDDEVTVVSLKYERVPEFCFAC 181

Query: 185 GRIGHRASDC 195
           GR+GH   +C
Sbjct: 182 GRLGHGIKEC 188

BLAST of Sed0014542 vs. NCBI nr
Match: TXG48811.1 (hypothetical protein EZV62_024686 [Acer yangbiense])

HSP 1 Score: 109.0 bits (271), Expect = 7.4e-20
Identity = 95/304 (31.25%), Postives = 148/304 (48.68%), Query Frame = 0

Query: 1   MDPAQFAQMMENLDLNDQEAQEIFELE---EEDVVAYESELEGVLACKILSSNQISSDVF 60
           M   + AQ+ ENL + D ++ EI ++    E D V    ++   L  K+L+  +++ + F
Sbjct: 1   MGSKELAQLCENLSITDDDS-EIHQISGGIERDGV---EDVNHCLVGKVLAGKRVNREAF 60

Query: 61  KKVVPKIW----NMENKI--------------------------YDDAVILFEAMAGDKR 120
           K V+ +IW    N+E ++                          +D  +I+ E + G   
Sbjct: 61  KSVIEQIWSPFGNVEIEVVVENIFMFYFNNPTDRDRIWHRGPWHFDRNLIVSEILEGTGN 120

Query: 121 VSEMEFAFGDFWVRLHDVPPACHTGNNARKLGSMLGKFIGWDCDGDKRN-RGKFLRLKIA 180
           +S++ F    FWV++HD+P  C     A+ L   +G+ I  D   + R+  GKFLR+K+ 
Sbjct: 121 ISQLSFNKAKFWVQIHDIPIMCMNRRMAKWLAEQIGEVI--DIPSESRDCWGKFLRVKVL 180

Query: 181 IDVRRPLRRALKLKSGVMVAEKWVRLSYEKLSFFCRGCGRIGHRASDCNFV-AIGESIPF 240
           ID+ RPL+R L+LK         V L YE+LS FC  CGR+GH  S+CN V A  E+I  
Sbjct: 181 IDISRPLKRWLQLKLDQSENIIMVNLKYERLSEFCYACGRLGHSISECNDVEAKKEAIEG 240

Query: 241 P---FGEDLREPYGFSRGDSGSSNRFSGRGRGRGRGRGEVSRSEDGGYFEKGVESKSIEG 267
           P   FG  LR      + +  SS+  SG    + R  GE SR +  G  ++ + S  +  
Sbjct: 241 PVTRFGSWLRAS-STKKTNIRSSSMGSGGTSEKERYLGESSRRDSEGSSKRVMASLDLLQ 297

BLAST of Sed0014542 vs. NCBI nr
Match: XP_042958241.1 (uncharacterized protein LOC122293864 [Carya illinoinensis] >XP_042964711.1 uncharacterized protein LOC122298932 [Carya illinoinensis])

HSP 1 Score: 108.6 bits (270), Expect = 9.7e-20
Identity = 84/303 (27.72%), Postives = 136/303 (44.88%), Query Frame = 0

Query: 1   MDPAQFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKV 60
           M+    + + E L L D+E QEI E+  E++    S+ +  +   ++S  + +       
Sbjct: 1   MEDGVLSSLYEGLKLTDEEKQEI-EVSTEEISLSTSKSKLCIMVCLISDKETNRGALMGT 60

Query: 61  VPKIWNMENKI------------------------------YDDAVILFEAMAGDKRVSE 120
           +PKIWN E KI                              +D +++  +   G K + E
Sbjct: 61  LPKIWNAEGKIVFKEVGRNKFLVEFKSRSDKIRVLNGRPWSFDKSLLCIQDCEGAKSIKE 120

Query: 121 MEFAFGDFWVRLHDVPPACHTGNNARKLGSMLGKFIGWDCDGDKRNRGKFLRLKIAIDVR 180
           M+F F  FW++ HD+P A  T +  +KLGS LGK +  D DG +   GKFLR+K+ +D+ 
Sbjct: 121 MQFCFEPFWIQCHDMPFAGMTASMGQKLGSSLGKVLMVDTDGSETCWGKFLRVKVMLDIT 180

Query: 181 RPLRRALKLKSGVMVAEK-WVRLSYEKLSFFCRGCGRIGHRASDCNFVAIGESIPFPFGE 240
           +PL R   +       EK W+   YE+++ FC  CG I H    C  +  G  +    G 
Sbjct: 181 KPLARGRFISQD---GEKFWIPFKYERMANFCYHCGSIKHGHGTCENIEKGLHV----GA 240

Query: 241 DLREPYGFSRGDSGSSNRFSGRGRGRGRGRGEVSRSEDGGYFEKGVESKSIEGGRREEAR 273
            L + YG       +SN+   +  G+ R       ++DGG  E G    S E  + ++  
Sbjct: 241 SLGQQYG---AWLRASNKKQVKSAGKVR-----KMTDDGGSSESGRRVSSDESTKEDDNY 287

BLAST of Sed0014542 vs. NCBI nr
Match: XP_042961424.1 (uncharacterized protein LOC122296079 [Carya illinoinensis])

HSP 1 Score: 108.6 bits (270), Expect = 9.7e-20
Identity = 84/303 (27.72%), Postives = 136/303 (44.88%), Query Frame = 0

Query: 1   MDPAQFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKV 60
           M+    + + E L L D+E QEI E+  E++    S+ +  +   ++S  + +       
Sbjct: 1   MEDGVLSSLYEGLKLTDEEKQEI-EVSTEEISLSTSKSKLCIMVCLISDKETNRGALMGT 60

Query: 61  VPKIWNMENKI------------------------------YDDAVILFEAMAGDKRVSE 120
           +PKIWN E KI                              +D +++  +   G K + E
Sbjct: 61  LPKIWNAEGKIVFKEVGRNKFLVEFKSRSDKIRVLNGRPWSFDKSLLCIQDCEGAKSIKE 120

Query: 121 MEFAFGDFWVRLHDVPPACHTGNNARKLGSMLGKFIGWDCDGDKRNRGKFLRLKIAIDVR 180
           M+F F  FW++ HD+P A  T +  +KLGS LGK +  D DG +   GKFLR+K+ +D+ 
Sbjct: 121 MQFCFEPFWIQCHDMPFAGMTASMGQKLGSSLGKVLMVDTDGSETCWGKFLRVKVMLDIT 180

Query: 181 RPLRRALKLKSGVMVAEK-WVRLSYEKLSFFCRGCGRIGHRASDCNFVAIGESIPFPFGE 240
           +PL R   +       EK W+   YE+++ FC  CG I H    C  +  G  +    G 
Sbjct: 181 KPLARGRFISQD---GEKFWIPFKYERMANFCYHCGSIKHGHGTCENIEKGLHV----GA 240

Query: 241 DLREPYGFSRGDSGSSNRFSGRGRGRGRGRGEVSRSEDGGYFEKGVESKSIEGGRREEAR 273
            L + YG       +SN+   +  G+ R       ++DGG  E G    S E  + ++  
Sbjct: 241 SLGQQYG---AWLRASNKKQVKSAGKVR-----KMTDDGGSSESGRRVSSDESTKEDDNY 287

BLAST of Sed0014542 vs. NCBI nr
Match: XP_042958061.1 (uncharacterized protein LOC122293581 [Carya illinoinensis])

HSP 1 Score: 108.6 bits (270), Expect = 9.7e-20
Identity = 84/303 (27.72%), Postives = 136/303 (44.88%), Query Frame = 0

Query: 1   MDPAQFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKV 60
           M+    + + E L L D+E QEI E+  E++    S+ +  +   ++S  + +       
Sbjct: 36  MEDGVLSSLYEGLKLTDEEKQEI-EVSTEEISLSTSKSKLCIMVCLISDKETNRGALMGT 95

Query: 61  VPKIWNMENKI------------------------------YDDAVILFEAMAGDKRVSE 120
           +PKIWN E KI                              +D +++  +   G K + E
Sbjct: 96  LPKIWNAEGKIVFKEVGRNKFLVEFKSRSDKIRVLNGRPWSFDKSLLCIQDCEGAKSIKE 155

Query: 121 MEFAFGDFWVRLHDVPPACHTGNNARKLGSMLGKFIGWDCDGDKRNRGKFLRLKIAIDVR 180
           M+F F  FW++ HD+P A  T +  +KLGS LGK +  D DG +   GKFLR+K+ +D+ 
Sbjct: 156 MQFCFEPFWIQCHDMPFAGMTASMGQKLGSSLGKVLMVDTDGSETCWGKFLRVKVMLDIT 215

Query: 181 RPLRRALKLKSGVMVAEK-WVRLSYEKLSFFCRGCGRIGHRASDCNFVAIGESIPFPFGE 240
           +PL R   +       EK W+   YE+++ FC  CG I H    C  +  G  +    G 
Sbjct: 216 KPLARGRFISQD---GEKFWIPFKYERMANFCYHCGSIKHGHGTCENIEKGLHV----GA 275

Query: 241 DLREPYGFSRGDSGSSNRFSGRGRGRGRGRGEVSRSEDGGYFEKGVESKSIEGGRREEAR 273
            L + YG       +SN+   +  G+ R       ++DGG  E G    S E  + ++  
Sbjct: 276 SLGQQYG---AWLRASNKKQVKSAGKVR-----KMTDDGGSSESGRRVSSDESTKEDDNY 322

BLAST of Sed0014542 vs. ExPASy TrEMBL
Match: A0A5C7HBH6 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019455 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.3e-21
Identity = 59/190 (31.05%), Postives = 106/190 (55.79%), Query Frame = 0

Query: 5   QFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKVVPKI 64
           + A++ ENL L +++   + E  EE  +  E +++  L  K+LS  +++ + FK ++ +I
Sbjct: 2   ELAKLYENLSLAEEDG-ALHECSEEVKIDGEKDVDRCLVGKVLSGKKVNREAFKGLIEQI 61

Query: 65  WNMENKIYDDAVILFEAMAGDKRVSEMEFAFGDFWVRLHDVPPACHTGNNARKLGSMLGK 124
           WN    +  D ++L E   G   +S ++F   DFW+++H++P  C     A+ L   +G+
Sbjct: 62  WNPYGNVEVDLIVL-EIPEGPGNISHLKFNKADFWIQIHEIPIMCMNRRIAKWLAEQIGE 121

Query: 125 FIGWDCDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGVMVAEKWVRLSYEKLSFFCRGC 184
            +    +  +   G+FLR+K+ ID+ +PL+R L+LK G       V L YE++  FC  C
Sbjct: 122 VVEIPSE-SRECWGRFLRVKVRIDISKPLKRWLRLKLGKDDEVTVVSLKYERVPEFCFAC 181

Query: 185 GRIGHRASDC 195
           GR+GH   +C
Sbjct: 182 GRLGHGIKEC 188

BLAST of Sed0014542 vs. ExPASy TrEMBL
Match: A0A5C7GW54 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024686 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.6e-20
Identity = 95/304 (31.25%), Postives = 148/304 (48.68%), Query Frame = 0

Query: 1   MDPAQFAQMMENLDLNDQEAQEIFELE---EEDVVAYESELEGVLACKILSSNQISSDVF 60
           M   + AQ+ ENL + D ++ EI ++    E D V    ++   L  K+L+  +++ + F
Sbjct: 1   MGSKELAQLCENLSITDDDS-EIHQISGGIERDGV---EDVNHCLVGKVLAGKRVNREAF 60

Query: 61  KKVVPKIW----NMENKI--------------------------YDDAVILFEAMAGDKR 120
           K V+ +IW    N+E ++                          +D  +I+ E + G   
Sbjct: 61  KSVIEQIWSPFGNVEIEVVVENIFMFYFNNPTDRDRIWHRGPWHFDRNLIVSEILEGTGN 120

Query: 121 VSEMEFAFGDFWVRLHDVPPACHTGNNARKLGSMLGKFIGWDCDGDKRN-RGKFLRLKIA 180
           +S++ F    FWV++HD+P  C     A+ L   +G+ I  D   + R+  GKFLR+K+ 
Sbjct: 121 ISQLSFNKAKFWVQIHDIPIMCMNRRMAKWLAEQIGEVI--DIPSESRDCWGKFLRVKVL 180

Query: 181 IDVRRPLRRALKLKSGVMVAEKWVRLSYEKLSFFCRGCGRIGHRASDCNFV-AIGESIPF 240
           ID+ RPL+R L+LK         V L YE+LS FC  CGR+GH  S+CN V A  E+I  
Sbjct: 181 IDISRPLKRWLQLKLDQSENIIMVNLKYERLSEFCYACGRLGHSISECNDVEAKKEAIEG 240

Query: 241 P---FGEDLREPYGFSRGDSGSSNRFSGRGRGRGRGRGEVSRSEDGGYFEKGVESKSIEG 267
           P   FG  LR      + +  SS+  SG    + R  GE SR +  G  ++ + S  +  
Sbjct: 241 PVTRFGSWLRAS-STKKTNIRSSSMGSGGTSEKERYLGESSRRDSEGSSKRVMASLDLLQ 297

BLAST of Sed0014542 vs. ExPASy TrEMBL
Match: A0A5C7IMP3 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005558 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-19
Identity = 65/198 (32.83%), Postives = 104/198 (52.53%), Query Frame = 0

Query: 1   MDPAQFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKV 60
           M+  + A++ E L L ++E   + +L+E      E  L   LA K+LSS  ++ D F  V
Sbjct: 2   MNAEEVAKLCEALTLKEKEG-PLMQLQEGMTNKREKRLALRLAGKLLSSKPVNRDAFMAV 61

Query: 61  VPKIWNMENKIYDDAVILFEAMAGDKRVSEMEFAFGDFWVRLHDVPPACHTGNNARKLGS 120
           +PKIW+     +D A+++     G + + +M F    FWV++H VP  C T    R LG+
Sbjct: 62  MPKIWS-----FDKALLVLVEPKGKRDIQDMSFNRVAFWVQIHRVPLICMTSEIGRALGN 121

Query: 121 MLGKFIGWDCDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGVMVAEKWVRLSYEKLSFF 180
           M+G+    D  G     GK++R+++ ID+ +P+R  L++       E  + L YE+L   
Sbjct: 122 MIGEVKEIDDGGSGDCVGKYIRVRVIIDINQPIRHILRVDVLRDGKESTMLLRYERLLEH 181

Query: 181 CRGCGRIGHRASDCNFVA 199
           C  CG IGH   DC+  A
Sbjct: 182 CFRCGTIGHVVRDCSMKA 193

BLAST of Sed0014542 vs. ExPASy TrEMBL
Match: A0A5C7H981 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022204 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-19
Identity = 60/194 (30.93%), Postives = 105/194 (54.12%), Query Frame = 0

Query: 1   MDPAQFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKV 60
           M  ++ A++ ENL L D++   + E+ EE  V    ++E  L  K+L+  +++ + FK++
Sbjct: 1   MSESEIAKLYENLFLVDEDV-VVHEMAEEVKVDEAKDVEMCLVGKVLAGKKVNREAFKRL 60

Query: 61  VPKIWNMENKIYDDAVILFEAMAGDKRVSEMEFAFGDFWVRLHDVPPACHTGNNARKLGS 120
           + +IW   N    +++I+ E   G   +S + F   DFW+++HD+   C     A+ L  
Sbjct: 61  IEQIW---NPFSHNSLIVLEKPVGTGNISRLGFNMADFWIQIHDILILCMNRRTAKWLAE 120

Query: 121 MLGKFIGWDCDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGVMVAEKWVRLSYEKLSFF 180
            +G+ +    +  +   GKF+R+K+ ID+ +PL+  L+LK G +     V L YE+L  F
Sbjct: 121 QIGEVVEIPSE-SRECWGKFMRVKVKIDISKPLKWWLRLKLGKVEEVTRVSLKYERLPEF 180

Query: 181 CRGCGRIGHRASDC 195
              CGRIGH    C
Sbjct: 181 YFACGRIGHGIKGC 189

BLAST of Sed0014542 vs. ExPASy TrEMBL
Match: A0A5C7IV30 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001759 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-19
Identity = 71/253 (28.06%), Postives = 124/253 (49.01%), Query Frame = 0

Query: 1   MDPAQFAQMMENLDLNDQEAQEIFELEEEDVVAYESELEGVLACKILSSNQISSDVFKKV 60
           M  A  A + ENL L D++   + E+ EE  +  E +++  L  ++LS  +++ + FK +
Sbjct: 1   MSAADLAGLCENLSLADEDG-ALLEVIEEAELEGEEDVDRSLVGRVLSGKKVNREAFKSL 60

Query: 61  VPKIWNMENKI----------YDDAVILFEAMAGDKRVSEMEFAFGDFWVRLHDVPPACH 120
           + ++WN    +          +  ++I+ E   G + VS++ F   +FWV++HD+P  C 
Sbjct: 61  IDQLWNPFGNVEIELARGPWHFGRSLIVLEKPMGFRDVSKLGFNKAEFWVQIHDIPIMCM 120

Query: 121 TGNNARKLGSMLGKFIGWDCDGDKRNRGKFLRLKIAIDVRRPLRRALKLKSGVMVAEKWV 180
               A+ L   +G  +    D  +   G+F+R+K+ ID+ RPL+R L+LK         V
Sbjct: 121 NRRTAKWLAEQIGAVVELPAD-SRECWGRFMRVKVLIDISRPLKRWLRLKLSKSDEIAVV 180

Query: 181 RLSYEKLSFFCRGCGRIGHRASDCNFVAIGESI----PFPFGEDLREPYGFSRGDSGSSN 240
            L YE+L  FC  CGR+GH   +C      +      P  +G+ L+ P G  +  S    
Sbjct: 181 GLKYERLPDFCYACGRVGHVLKECTDEEAKQGALDGSPTKYGQWLKAP-GVEKEKSRFQA 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG54199.16.7e-2131.05hypothetical protein EZV62_019455 [Acer yangbiense][more]
TXG48811.17.4e-2031.25hypothetical protein EZV62_024686 [Acer yangbiense][more]
XP_042958241.19.7e-2027.72uncharacterized protein LOC122293864 [Carya illinoinensis] >XP_042964711.1 uncha... [more]
XP_042961424.19.7e-2027.72uncharacterized protein LOC122296079 [Carya illinoinensis][more]
XP_042958061.19.7e-2027.72uncharacterized protein LOC122293581 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7HBH63.3e-2131.05CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01945... [more]
A0A5C7GW543.6e-2031.25CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02468... [more]
A0A5C7IMP31.4e-1932.83CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00555... [more]
A0A5C7H9811.8e-1930.93Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022204 PE=4 SV=1[more]
A0A5C7IV302.3e-1928.06CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00175... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 63..145
e-value: 2.8E-7
score: 30.1
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 147..195
e-value: 8.0E-11
score: 41.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..273
NoneNo IPR availablePANTHERPTHR31286:SF26BNAC07G15150D PROTEINcoord: 63..267
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 63..267
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 181..194
score: 9.108787

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0014542.1Sed0014542.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding