Homology
BLAST of Sed0014539 vs. NCBI nr
Match:
XP_022953742.1 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata])
HSP 1 Score: 776.5 bits (2004), Expect = 1.8e-220
Identity = 401/628 (63.85%), Postives = 478/628 (76.11%), Query Frame = 0
Query: 2 VSRTVSSSLFKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP-----------QKL 61
+S ++S + K KL S+FT+ P IASSNP+N SP + P+++ P +K
Sbjct: 10 ISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPEVSLEKS 69
Query: 62 T---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYS 121
T CK G + S+AL FFDLM+ A PTP MSSFN+LL GL KTKHYS
Sbjct: 70 TTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLAKTKHYS 129
Query: 122 QFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMI 181
+ +LY RM+L GL P+ TL ILLNCLC NR++EG AA+A IIR +I N+VTYTS+I
Sbjct: 130 EVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTYTSLI 189
Query: 182 KGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGR 241
KGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLHEEML+G GR
Sbjct: 190 KGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGR 249
Query: 242 YGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKL 301
YGISCKP++I Y+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLIHGF GK
Sbjct: 250 YGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKW 309
Query: 302 EEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVPSLITHNTL 361
EEAK LF EMVD G+QPN VTF +L KA V +A EL E+MIQRGNVP L T+NTL
Sbjct: 310 EEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTL 369
Query: 362 IDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRI 421
+DGFCLV D+ SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +Y EMLQV I
Sbjct: 370 MDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGI 429
Query: 422 KPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAME 481
KPS+ITYN+LL A+KIFGVI+ H L S T +IF+DGLCKN CLLEAME
Sbjct: 430 KPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAME 489
Query: 482 FFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCK 541
FN+LS+++K++ I CLI+GLCK GKLE A + FDK+S +GLL +VVTY+ILI GCCK
Sbjct: 490 IFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCK 549
Query: 542 EGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSST 589
EG+VEKA++LF KMEENG TP+V YNTLLRGFY++NK+E VVELLHRMV+K VVPD+ST
Sbjct: 550 EGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDAST 609
BLAST of Sed0014539 vs. NCBI nr
Match:
KAG7014482.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 773.9 bits (1997), Expect = 1.2e-219
Identity = 403/637 (63.27%), Postives = 480/637 (75.35%), Query Frame = 0
Query: 1 MVSRTVSSSL--------FKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP----- 60
MVS+TV+S++ K KL S+FT+ P IASSNP+N SP + P+++ P
Sbjct: 1 MVSKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNV 60
Query: 61 ------QKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
+K T CK G + S+A FFDLM+ A PTP MSSFN+LL
Sbjct: 61 SPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLG 120
Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
GL KTKHYS+ +LY RM+L GL P+ TL ILLNCLC NR++EG AA+A IIR +I
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180
Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240
Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
EEML+G GRYGISCKP++I Y+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300
Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
HGF GK EEAK LF EMVD G+QPN VTF +L KA V +A EL E+MIQRGNV
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNV 360
Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
P L T+NTL+DGFCLV D+ SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420
Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
Y EMLQV IKPS+ITYN+LL A+KIFGVI+ H L S T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480
Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
N CLLEAME FN+LS+++K++ I CLI+GLCK GKLE A + FDK+S +GLL +VVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540
Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 589
+ILI GCCKEG+VEKA++LF KMEENG TP+V YNTLLRGFY++NK+E VVELLHRMV+
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600
BLAST of Sed0014539 vs. NCBI nr
Match:
KAG6575949.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 773.9 bits (1997), Expect = 1.2e-219
Identity = 403/637 (63.27%), Postives = 480/637 (75.35%), Query Frame = 0
Query: 1 MVSRTVSSSL--------FKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP----- 60
MVS+TV+S++ K KL S+FT+ P IASSNP+N SP + P+++ P
Sbjct: 1 MVSKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNV 60
Query: 61 ------QKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
+K T CK G + S+A FFDLM+ A PTP MSSFN+LL
Sbjct: 61 SPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLG 120
Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
GL KTKHYS+ +LY RM+L GL P+ TL ILLNCLC NR++EG AA+A IIR +I
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180
Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240
Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
EEML+G GRYGISCKP++I Y+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300
Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
HGF GK EEAK LF EMVD G+QPN VTF +L KA V +A EL E+MIQRGNV
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNV 360
Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
P L T+NTL+DGFCLV D+ SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420
Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
Y EMLQV IKPS+ITYN+LL A+KIFGVI+ H L S T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480
Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
N CLLEAME FN+LS+++K++ I CLI+GLCK GKLE A + FDK+S +GLL +VVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540
Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 589
+ILI GCCKEG+VEKA++LF KMEENG TP+V YNTLLRGFY++NK+E VVELLHRMV+
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600
BLAST of Sed0014539 vs. NCBI nr
Match:
XP_038874245.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida] >XP_038874246.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida] >XP_038874247.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 770.0 bits (1987), Expect = 1.7e-218
Identity = 399/638 (62.54%), Postives = 480/638 (75.24%), Query Frame = 0
Query: 1 MVSRTVSSSLF--------KRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLN------- 60
MVS+TV+S++F K KL S+FT +ASSNP+N P K PVL+
Sbjct: 1 MVSKTVASAIFPSLSPAPSKGKLSSLFTHPQRVASSNPQNPFPIPAKSPPVLSKLFKSTV 60
Query: 61 ----PPQKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
P+K T CK G ++S+ L FFDLM+SA PTP M+SFN+LL
Sbjct: 61 SPEISPEKSTSEISFQERLRTFLHNCKTGNFTASEGLQFFDLMMSANPTPAMASFNLLLG 120
Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
GL K KHYS+ FQ+Y RM+L GL P+ T ILLNCLC NRV+EG AA+A IIR Y
Sbjct: 121 GLAKIKHYSEVFQVYYRMSLAGLLPNYITFNILLNCLCNVNRVSEGLAAMAGIIRRGYTP 180
Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240
Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
EEML+G G YGI+CKP++ICY+TIIDGLCK+G EDKAR+LFEEMKAQR+LP+VVSYSSLI
Sbjct: 241 EEMLNGTGHYGINCKPNVICYSTIIDGLCKDGQEDKARKLFEEMKAQRMLPDVVSYSSLI 300
Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
HGF ++G+ EEAK L EMVDQG+QPN VTF +L K V +AK+L E+MIQRGN+
Sbjct: 301 HGFCHSGRWEEAKCLLNEMVDQGIQPNAVTFNVLMGMLCKVGQVIEAKKLLEVMIQRGNI 360
Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
P L T+NTL+DGFCLVGD+ SARELF S+ SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFTYNTLMDGFCLVGDLHSARELFDSIPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420
Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
Y EMLQ+ IKPS+ITYN+LL A+KIFGVI+ L S TF+IFLDGLCK
Sbjct: 421 YNEMLQMGIKPSVITYNALLMGLFQARKVNDAKKIFGVIQARGLVPSSCTFSIFLDGLCK 480
Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
N CLLEAMEF+N+LS+++K+N I CLINGLCK KLE A +LFDK SH+GLL +VVTY
Sbjct: 481 NDCLLEAMEFYNELSYNLKLNIDIFNCLINGLCKARKLETAWELFDKFSHEGLLPNVVTY 540
Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 590
+ILI GCCKEG++EKA++LF KMEENG TP+V YNTLL GFY +NK+E V+ELLHRMVQ
Sbjct: 541 SILIHGCCKEGQLEKANDLFRKMEENGCTPNVITYNTLLCGFYGSNKREEVIELLHRMVQ 600
BLAST of Sed0014539 vs. NCBI nr
Match:
XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima])
HSP 1 Score: 769.6 bits (1986), Expect = 2.2e-218
Identity = 399/637 (62.64%), Postives = 478/637 (75.04%), Query Frame = 0
Query: 1 MVSRTVSSSL--------FKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP----- 60
MVS+TV+S++ K KL S+FT IASS P+N SP + PV++ P
Sbjct: 1 MVSKTVASAISSSLLPAPSKGKLSSLFTHPTIIASSKPQNPSPISAESPPVISKPPNSNV 60
Query: 61 ------QKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
+K T CK G + S+AL FFDLM+ A PTP MSSFN+LL
Sbjct: 61 SPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLG 120
Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
GL KTKHYS+ +LY RM+L GL P+ TL ILLNCLC NR++EG AA+A IIR Y+
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGYVP 180
Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240
Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
EEML+G GRYGISCKP++ICY+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300
Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
HGF GK EEAK LF EMVD G+QPN VTF +L KA V +A +L E+MIQRGNV
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEVMIQRGNV 360
Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
P L +NTL+DGFCLV D++SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420
Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
Y EMLQV +KPS+ITYN+LL A+KIFGVI+ H L S T +IF+DGLCK
Sbjct: 421 YNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480
Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
N CLLEAME FN+LS+++K++ I CLI+GLCK GKLE A + FDK+S +G L +VVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNVVTY 540
Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 589
+ILI GCCKEG+VEKA++LF KMEENG TP+V YNTLLRGFY++NK+E VVELLHRMV
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVN 600
BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 344.4 bits (882), Expect = 3.0e-93
Identity = 202/577 (35.01%), Postives = 312/577 (54.07%), Query Frame = 0
Query: 57 VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
+ + A+ F+ MI ++P P FN L + + +TK Y M L+G+ D T+
Sbjct: 49 IKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 117 TILLNC-----------------------------------LCIANRVAEGFAAVAKIIR 176
TI++NC C+ RV+E A V +++
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 177 GDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNI 236
++VT +++I GLC+K R+SEA+ L RM G + DE+TYG ++ LC++GN+ +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 237 ALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVS 296
AL L +M + + K ++ Y+ +ID LCK+G D A LF EM+ + + +VV+
Sbjct: 229 ALDLFRKMEER------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 288
Query: 297 YSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMI 356
YSSLI G GK ++ ++ EM+ + + P+VVTF+ L K + +AKEL+ MI
Sbjct: 289 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 348
Query: 357 QRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVE 416
RG P IT+N+LIDGFC + A ++F M SK CEP++++Y+ILIN YCK +V+
Sbjct: 349 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 408
Query: 417 VAMDLYKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFL 476
M L++E+ + P+ ITYN+L+ A+++F + + T+ I L
Sbjct: 409 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 468
Query: 477 DGLCKNGCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLL 536
DGLC NG L +A+E F K+ M + I +I+G+C K++ A LF LS KG+
Sbjct: 469 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 528
Query: 537 SDVVTYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVEL 580
DVVTYN++I G CK+G + +A LF KM+E+G TPD YN L+R + VEL
Sbjct: 529 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 588
BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match:
Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)
HSP 1 Score: 335.9 bits (860), Expect = 1.1e-90
Identity = 192/558 (34.41%), Postives = 308/558 (55.20%), Query Frame = 0
Query: 57 VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
+ + A+ F MI ++P P + F+ L + + KTK Y L +M L G++ + TL
Sbjct: 67 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
+I++NC C ++ F+A+ KII+ Y N +T++++I GLC++ R+SEA+ L RM
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLD-----GDGRYG----ISCKP----- 236
+G K D IT TL+ GLC +G A+ L ++M++ YG + CK
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 237 ---------------DLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIH 296
D + Y+ IIDGLCK G D A LF EM+ + + N+++Y+ LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 297 GFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVP 356
GF AG+ ++ +L +M+ + + PNVVTF++L K + +A+EL + MI RG P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 357 SLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLY 416
IT+ +LIDGFC + A ++ M SK C+PN+ ++ ILINGYCK +++ ++L+
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 417 KEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCKN 476
++M + +TYN+L++ A+++F + + + T+ I LDGLC N
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 477 GCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 536
G +A+E F K+ M+++ I +I+G+C K++ A DLF L KG+ V TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 537 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 570
NI+I G CK+G + +A LF KMEE+G PD YN L+R + V+L+ + +
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match:
Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)
HSP 1 Score: 325.1 bits (832), Expect = 1.9e-87
Identity = 187/572 (32.69%), Postives = 311/572 (54.37%), Query Frame = 0
Query: 57 VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
+ + A+ F MI ++P P + FN L + + KTK Y L +M G++ TL
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
+I++NC C +++ F+ + KI++ Y + V + +++ GLC++ R+SEA+ L RM
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLD-----GDGRYG----ISCKP----- 236
+G K IT TL+ GLC G + A+ L + M++ + YG + CK
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 237 ---------------DLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIH 296
D + Y+ IIDGLCK+G D A LF EM+ + ++++Y++LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 297 GFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVP 356
GF AG+ ++ +L +M+ + + PNVVTF++L K + +A +L + M+QRG P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 357 SLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLY 416
+ IT+N+LIDGFC ++ A ++ M SK C+P+++++ ILINGYCK +++ ++L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 417 KEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCKN 476
+EM + + +TYN+L++ A+K+F + + D ++ I LDGLC N
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 477 GCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 536
G L +A+E F K+ M+++ I +I+G+C K++ A DLF L KG+ D Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 537 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 581
NI+I C++ + KA LF KM E G PD YN L+R ++ EL+ M
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match:
Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 325.1 bits (832), Expect = 1.9e-87
Identity = 193/573 (33.68%), Postives = 309/573 (53.93%), Query Frame = 0
Query: 62 ALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLN 121
A+ F M+ ++P P + F+ LL+ + K + L +M G+ + T +IL+N
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 122 CLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAI------------- 181
C C +++ A + K+++ Y N+VT +S++ G C +RISEA+
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 182 ----------------------RLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 241
L RM GC+ D +TYG ++ GLC+ G+T++A L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 242 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 301
+M G +P ++ YNTIIDGLCK D A LF+EM+ + + PNVV+YSSLI
Sbjct: 245 NKMEQG------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 304
Query: 302 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 361
G+ +A RL ++M+++ + P+V TF+ L K + +A++L++ M++R
Sbjct: 305 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 364
Query: 362 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 421
PS++T+++LI+GFC+ + A+++F M SK C P+V++Y LI G+CK +VE M++
Sbjct: 365 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 424
Query: 422 YKEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCK 481
++EM Q + + +TYN L++ A++IF + + + T+N LDGLCK
Sbjct: 425 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 484
Query: 482 NGCLLEAMEFFNKLSFHMKMNDKI--SGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVV 541
NG L +AM F L KM I +I G+CK GK+E DLF LS KG+ DVV
Sbjct: 485 NGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 544
Query: 542 TYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRM 580
YN +I G C++G E+A LF +M+E+G P+ YNTL+R + +E EL+ M
Sbjct: 545 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 604
BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match:
P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)
HSP 1 Score: 322.8 bits (826), Expect = 9.2e-87
Identity = 173/542 (31.92%), Postives = 306/542 (56.46%), Query Frame = 0
Query: 57 VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
+ A+ F MI ++P P + F+ + + +TK ++ ++ L+G++ + TL
Sbjct: 67 IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
I++NC C + ++ + K+++ Y + T+ ++IKGL ++ ++SEA+ L RM
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCK 236
GC+ D +TY +++ G+C++G+T++AL L +M + + K D+ Y+TIID LC+
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER------NVKADVFTYSTIIDSLCR 246
Query: 237 EGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVT 296
+G D A LF+EM+ + + +VV+Y+SL+ G AGK + L +MV + + PNV+T
Sbjct: 247 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 306
Query: 297 FTML-----KAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMS 356
F +L K + +A EL++ MI RG P++IT+NTL+DG+C+ + A + M
Sbjct: 307 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 366
Query: 357 SKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLLK--------- 416
+C P+++++T LI GYC +V+ M +++ + + + + +TY+ L++
Sbjct: 367 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 426
Query: 417 -ARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKL-SFHMKMNDKISGCLI 476
A ++F + H + D T+ I LDGLC NG L +A+E F L M + + +I
Sbjct: 427 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 486
Query: 477 NGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKMEENGIT 536
G+CK GK+E A +LF L KG+ +V+TY ++I G CK+G + +A+ L KMEE+G
Sbjct: 487 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 546
Query: 537 PDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDML---SKDENYWDC 580
P+ YNTL+R + +L+ M D+S+ V+DML D+++ D
Sbjct: 547 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 602
BLAST of Sed0014539 vs. ExPASy TrEMBL
Match:
A0A6J1GP31 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456184 PE=4 SV=1)
HSP 1 Score: 776.5 bits (2004), Expect = 8.6e-221
Identity = 401/628 (63.85%), Postives = 478/628 (76.11%), Query Frame = 0
Query: 2 VSRTVSSSLFKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP-----------QKL 61
+S ++S + K KL S+FT+ P IASSNP+N SP + P+++ P +K
Sbjct: 10 ISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPEVSLEKS 69
Query: 62 T---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYS 121
T CK G + S+AL FFDLM+ A PTP MSSFN+LL GL KTKHYS
Sbjct: 70 TTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLAKTKHYS 129
Query: 122 QFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMI 181
+ +LY RM+L GL P+ TL ILLNCLC NR++EG AA+A IIR +I N+VTYTS+I
Sbjct: 130 EVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTYTSLI 189
Query: 182 KGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGR 241
KGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLHEEML+G GR
Sbjct: 190 KGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGR 249
Query: 242 YGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKL 301
YGISCKP++I Y+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLIHGF GK
Sbjct: 250 YGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKW 309
Query: 302 EEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVPSLITHNTL 361
EEAK LF EMVD G+QPN VTF +L KA V +A EL E+MIQRGNVP L T+NTL
Sbjct: 310 EEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTL 369
Query: 362 IDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRI 421
+DGFCLV D+ SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +Y EMLQV I
Sbjct: 370 MDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGI 429
Query: 422 KPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAME 481
KPS+ITYN+LL A+KIFGVI+ H L S T +IF+DGLCKN CLLEAME
Sbjct: 430 KPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAME 489
Query: 482 FFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCK 541
FN+LS+++K++ I CLI+GLCK GKLE A + FDK+S +GLL +VVTY+ILI GCCK
Sbjct: 490 IFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCK 549
Query: 542 EGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSST 589
EG+VEKA++LF KMEENG TP+V YNTLLRGFY++NK+E VVELLHRMV+K VVPD+ST
Sbjct: 550 EGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDAST 609
BLAST of Sed0014539 vs. ExPASy TrEMBL
Match:
A0A6J1JSG4 (pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima OX=3661 GN=LOC111488506 PE=4 SV=1)
HSP 1 Score: 769.6 bits (1986), Expect = 1.1e-218
Identity = 399/637 (62.64%), Postives = 478/637 (75.04%), Query Frame = 0
Query: 1 MVSRTVSSSL--------FKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP----- 60
MVS+TV+S++ K KL S+FT IASS P+N SP + PV++ P
Sbjct: 1 MVSKTVASAISSSLLPAPSKGKLSSLFTHPTIIASSKPQNPSPISAESPPVISKPPNSNV 60
Query: 61 ------QKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
+K T CK G + S+AL FFDLM+ A PTP MSSFN+LL
Sbjct: 61 SPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLG 120
Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
GL KTKHYS+ +LY RM+L GL P+ TL ILLNCLC NR++EG AA+A IIR Y+
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGYVP 180
Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240
Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
EEML+G GRYGISCKP++ICY+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300
Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
HGF GK EEAK LF EMVD G+QPN VTF +L KA V +A +L E+MIQRGNV
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEVMIQRGNV 360
Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
P L +NTL+DGFCLV D++SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420
Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
Y EMLQV +KPS+ITYN+LL A+KIFGVI+ H L S T +IF+DGLCK
Sbjct: 421 YNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480
Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
N CLLEAME FN+LS+++K++ I CLI+GLCK GKLE A + FDK+S +G L +VVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNVVTY 540
Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 589
+ILI GCCKEG+VEKA++LF KMEENG TP+V YNTLLRGFY++NK+E VVELLHRMV
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVN 600
BLAST of Sed0014539 vs. ExPASy TrEMBL
Match:
A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)
HSP 1 Score: 763.1 bits (1969), Expect = 9.8e-217
Identity = 395/626 (63.10%), Postives = 472/626 (75.40%), Query Frame = 0
Query: 7 SSSLFKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPPQKLT--------------- 66
SS+ K KL S+FTQSP I SSNP+ S + K P+L+ P K T
Sbjct: 17 SSAPAKGKLSSLFTQSPRIRSSNPQVSPGSSSKRPPLLSRPPKPTVSPEDSPEELTTGIS 76
Query: 67 -----------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQL 126
CK G V++++AL FFDLM+ KPTP MSSFN+LL GL K KHYS+ L
Sbjct: 77 FQDRHRTFLQNCKTGNVTAAEALQFFDLMLRTKPTPAMSSFNLLLGGLAKIKHYSEVLSL 136
Query: 127 YTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCM 186
Y RM+L G+ P+ TL ILLNCLC NRV+EG AA+A IIR YI N+VTYTS+IKGLCM
Sbjct: 137 YDRMSLAGILPNYITLNILLNCLCNVNRVSEGLAAMAGIIRRGYIPNIVTYTSLIKGLCM 196
Query: 187 KQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISC 246
+ RISEA RLF RM+ LGC + ITYGTLIKGLCQTGNTNIALKLHEEML+G GRYGI+C
Sbjct: 197 EHRISEATRLFMRMQKLGCTPNVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYGITC 256
Query: 247 KPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKR 306
KP++ICY+TIIDGLCK+GLEDKARELFEEMKAQ +LP+V+SYSSLIHGF Y GK EEAK
Sbjct: 257 KPNVICYSTIIDGLCKDGLEDKARELFEEMKAQGMLPDVISYSSLIHGFCYGGKWEEAKS 316
Query: 307 LFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRG-NVPSLITHNTLIDGF 366
LF EMVD GVQPNVVTF +L KA V +AKEL E+M+Q G N P L T+NTL+DGF
Sbjct: 317 LFNEMVDHGVQPNVVTFNVLMDMLCKAGKVIEAKELLELMVQGGNNAPDLFTYNTLMDGF 376
Query: 367 CLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSL 426
CLVGD+ SARELF++M +K CEPNVISY +LINGYCKN K+E AM LY EMLQV I+PS+
Sbjct: 377 CLVGDLNSARELFINMPNKGCEPNVISYNVLINGYCKNWKMEEAMKLYNEMLQVGIRPSV 436
Query: 427 ITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNK 486
ITYNSLL A+K+FGVI+ + L+ S T++ FLDGLCKN CLLEA+E FN
Sbjct: 437 ITYNSLLTGLFQAGMVVDAKKLFGVIQANGLAPSSSTYSTFLDGLCKNDCLLEAIELFNG 496
Query: 487 LS-FHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGR 546
L +++K+N +I CLI+GLCK GKLE A +LFDK S +GLL +VVTY+I+I G CK+G+
Sbjct: 497 LKPYNLKLNIEIFNCLIDGLCKAGKLETAWELFDKFSLEGLLPNVVTYSIMIHGLCKDGQ 556
Query: 547 VEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNF 590
+EKA +LF KMEENG TP++ YNTL+RGFYENNK E VVELLHRMV+K V+PD+STC
Sbjct: 557 LEKAIDLFRKMEENGCTPNIITYNTLMRGFYENNKPEEVVELLHRMVKKNVLPDASTCTI 616
BLAST of Sed0014539 vs. ExPASy TrEMBL
Match:
A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)
HSP 1 Score: 657.1 bits (1694), Expect = 7.6e-185
Identity = 326/553 (58.95%), Postives = 417/553 (75.41%), Query Frame = 0
Query: 52 CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSP 111
CK G ++++QA HFFDLM+ + P P +SSF+ LL GL K KHYS F LY +M L GLSP
Sbjct: 14 CKTGNITATQAFHFFDLMLRSYPIPPISSFDCLLGGLAKIKHYSLLFSLYNKMRLAGLSP 73
Query: 112 DQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLF 171
TL IL+NCLC NRV+E A +A ++R YI NVVTYT++IKGLCM+ RISEA RLF
Sbjct: 74 SAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 133
Query: 172 TRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTII 231
RM+ LGC + +TYGTL+KGLCQTGN NIALKLH+EML+ +YGI+CKP++ YN II
Sbjct: 134 LRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNYNIII 193
Query: 232 DGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQ 291
DGLCK G ED+A ELFEEMKAQ ++PNV+SYSSLIHGF A K EE+KRLF EMVDQGVQ
Sbjct: 194 DGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVDQGVQ 253
Query: 292 PNVVTF-----TMLKAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSAREL 351
P+ VTF T+ K V +AK+LFE+MIQRG VP L +++L++GFC+VGD+ SAREL
Sbjct: 254 PDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGDLNSAREL 313
Query: 352 FVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLL----- 411
FVSM SK CEP+VISYT+LINGYCK KVE AM LY EML V +P++ITY +LL
Sbjct: 314 FVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALLTGLFL 373
Query: 412 -----KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKL-SFHMKMNDKI 471
A+K+F +K +S++S + I LDGLCKNGCL EAM+ F +L S++ K++ +
Sbjct: 374 AGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFKLDIET 433
Query: 472 SGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKME 531
CLI+GLCK GKLE A +LF+KLS +GL +VVTY+I+I G C+EG+V+KA+ L KME
Sbjct: 434 YSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVLIQKME 493
Query: 532 ENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDMLSKDENYW 589
NG P++ YNTL+RGFYE+NK + VV+LLH MV+K V+PD++TC+ V+DML KDE Y
Sbjct: 494 TNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCKDEKYQ 553
BLAST of Sed0014539 vs. ExPASy TrEMBL
Match:
A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)
HSP 1 Score: 657.1 bits (1694), Expect = 7.6e-185
Identity = 326/553 (58.95%), Postives = 417/553 (75.41%), Query Frame = 0
Query: 52 CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSP 111
CK G ++++QA HFFDLM+ + P P +SSF+ LL GL K KHYS F LY +M L GLSP
Sbjct: 14 CKTGNITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLLFSLYNKMRLAGLSP 73
Query: 112 DQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLF 171
TL IL+NCLC NRV+E A +A ++R YI NVVTYT++IKGLCM+ RISEA RLF
Sbjct: 74 SAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 133
Query: 172 TRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTII 231
RM+ LGC + +TYGTL+KGLCQTGN NIALKLH+EML+ +YGI+CKP++ YN II
Sbjct: 134 LRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNYNIII 193
Query: 232 DGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQ 291
DGLCK G ED+A ELFEEMKAQ ++PNV+SYSSLIHGF A K EE+KRLF EMVDQGVQ
Sbjct: 194 DGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVDQGVQ 253
Query: 292 PNVVTF-----TMLKAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSAREL 351
P+ VTF T+ K V +AK+LFE+MIQRG VP L +++L++GFC+VGD+ SAREL
Sbjct: 254 PDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGDLNSAREL 313
Query: 352 FVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLL----- 411
FVSM SK CEP+VISYT+LINGYCK KVE AM LY EML V +P++ITY +LL
Sbjct: 314 FVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALLTGLFL 373
Query: 412 -----KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKL-SFHMKMNDKI 471
A+K+F +K +S++S + I LDGLCKNGCL EAM+ F +L S++ K++ +
Sbjct: 374 AGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFKLDIET 433
Query: 472 SGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKME 531
CLI+GLCK GKLE A +LF+KLS +GL +VVTY+I+I G C+EG+V+KA+ L KME
Sbjct: 434 YSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVLIQKME 493
Query: 532 ENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDMLSKDENYW 589
NG P++ YNTL+RGFYE+NK + VV+LLH MV+K V+PD++TC+ V+DML KDE Y
Sbjct: 494 TNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCKDEKYQ 553
BLAST of Sed0014539 vs. TAIR 10
Match:
AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 344.4 bits (882), Expect = 2.1e-94
Identity = 202/577 (35.01%), Postives = 312/577 (54.07%), Query Frame = 0
Query: 57 VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
+ + A+ F+ MI ++P P FN L + + +TK Y M L+G+ D T+
Sbjct: 49 IKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 117 TILLNC-----------------------------------LCIANRVAEGFAAVAKIIR 176
TI++NC C+ RV+E A V +++
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 177 GDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNI 236
++VT +++I GLC+K R+SEA+ L RM G + DE+TYG ++ LC++GN+ +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 237 ALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVS 296
AL L +M + + K ++ Y+ +ID LCK+G D A LF EM+ + + +VV+
Sbjct: 229 ALDLFRKMEER------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 288
Query: 297 YSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMI 356
YSSLI G GK ++ ++ EM+ + + P+VVTF+ L K + +AKEL+ MI
Sbjct: 289 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 348
Query: 357 QRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVE 416
RG P IT+N+LIDGFC + A ++F M SK CEP++++Y+ILIN YCK +V+
Sbjct: 349 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 408
Query: 417 VAMDLYKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFL 476
M L++E+ + P+ ITYN+L+ A+++F + + T+ I L
Sbjct: 409 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 468
Query: 477 DGLCKNGCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLL 536
DGLC NG L +A+E F K+ M + I +I+G+C K++ A LF LS KG+
Sbjct: 469 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 528
Query: 537 SDVVTYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVEL 580
DVVTYN++I G CK+G + +A LF KM+E+G TPD YN L+R + VEL
Sbjct: 529 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 588
BLAST of Sed0014539 vs. TAIR 10
Match:
AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 335.9 bits (860), Expect = 7.5e-92
Identity = 192/558 (34.41%), Postives = 308/558 (55.20%), Query Frame = 0
Query: 57 VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
+ + A+ F MI ++P P + F+ L + + KTK Y L +M L G++ + TL
Sbjct: 67 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
+I++NC C ++ F+A+ KII+ Y N +T++++I GLC++ R+SEA+ L RM
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLD-----GDGRYG----ISCKP----- 236
+G K D IT TL+ GLC +G A+ L ++M++ YG + CK
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 237 ---------------DLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIH 296
D + Y+ IIDGLCK G D A LF EM+ + + N+++Y+ LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 297 GFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVP 356
GF AG+ ++ +L +M+ + + PNVVTF++L K + +A+EL + MI RG P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 357 SLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLY 416
IT+ +LIDGFC + A ++ M SK C+PN+ ++ ILINGYCK +++ ++L+
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 417 KEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCKN 476
++M + +TYN+L++ A+++F + + + T+ I LDGLC N
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 477 GCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 536
G +A+E F K+ M+++ I +I+G+C K++ A DLF L KG+ V TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 537 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 570
NI+I G CK+G + +A LF KMEE+G PD YN L+R + V+L+ + +
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
BLAST of Sed0014539 vs. TAIR 10
Match:
AT1G62670.1 (rna processing factor 2 )
HSP 1 Score: 325.1 bits (832), Expect = 1.3e-88
Identity = 193/573 (33.68%), Postives = 309/573 (53.93%), Query Frame = 0
Query: 62 ALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLN 121
A+ F M+ ++P P + F+ LL+ + K + L +M G+ + T +IL+N
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 122 CLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAI------------- 181
C C +++ A + K+++ Y N+VT +S++ G C +RISEA+
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 182 ----------------------RLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 241
L RM GC+ D +TYG ++ GLC+ G+T++A L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 242 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 301
+M G +P ++ YNTIIDGLCK D A LF+EM+ + + PNVV+YSSLI
Sbjct: 245 NKMEQG------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 304
Query: 302 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 361
G+ +A RL ++M+++ + P+V TF+ L K + +A++L++ M++R
Sbjct: 305 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 364
Query: 362 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 421
PS++T+++LI+GFC+ + A+++F M SK C P+V++Y LI G+CK +VE M++
Sbjct: 365 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 424
Query: 422 YKEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCK 481
++EM Q + + +TYN L++ A++IF + + + T+N LDGLCK
Sbjct: 425 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 484
Query: 482 NGCLLEAMEFFNKLSFHMKMNDKI--SGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVV 541
NG L +AM F L KM I +I G+CK GK+E DLF LS KG+ DVV
Sbjct: 485 NGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 544
Query: 542 TYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRM 580
YN +I G C++G E+A LF +M+E+G P+ YNTL+R + +E EL+ M
Sbjct: 545 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 604
BLAST of Sed0014539 vs. TAIR 10
Match:
AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 325.1 bits (832), Expect = 1.3e-88
Identity = 187/572 (32.69%), Postives = 311/572 (54.37%), Query Frame = 0
Query: 57 VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
+ + A+ F MI ++P P + FN L + + KTK Y L +M G++ TL
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
+I++NC C +++ F+ + KI++ Y + V + +++ GLC++ R+SEA+ L RM
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLD-----GDGRYG----ISCKP----- 236
+G K IT TL+ GLC G + A+ L + M++ + YG + CK
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 237 ---------------DLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIH 296
D + Y+ IIDGLCK+G D A LF EM+ + ++++Y++LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 297 GFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVP 356
GF AG+ ++ +L +M+ + + PNVVTF++L K + +A +L + M+QRG P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 357 SLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLY 416
+ IT+N+LIDGFC ++ A ++ M SK C+P+++++ ILINGYCK +++ ++L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 417 KEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCKN 476
+EM + + +TYN+L++ A+K+F + + D ++ I LDGLC N
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 477 GCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 536
G L +A+E F K+ M+++ I +I+G+C K++ A DLF L KG+ D Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 537 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 581
NI+I C++ + KA LF KM E G PD YN L+R ++ EL+ M
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
BLAST of Sed0014539 vs. TAIR 10
Match:
AT1G12700.1 (ATP binding;nucleic acid binding;helicases )
HSP 1 Score: 321.2 bits (822), Expect = 1.9e-87
Identity = 170/528 (32.20%), Postives = 299/528 (56.63%), Query Frame = 0
Query: 57 VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
+ A+ F MI ++P P + F+ + + +TK ++ ++ L+G++ + TL
Sbjct: 67 IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
I++NC C + ++ + K+++ Y + T+ ++IKGL ++ ++SEA+ L RM
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCK 236
GC+ D +TY +++ G+C++G+T++AL L +M + + K D+ Y+TIID LC+
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER------NVKADVFTYSTIIDSLCR 246
Query: 237 EGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVT 296
+G D A LF+EM+ + + +VV+Y+SL+ G AGK + L +MV + + PNV+T
Sbjct: 247 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 306
Query: 297 FTML-----KAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMS 356
F +L K + +A EL++ MI RG P++IT+NTL+DG+C+ + A + M
Sbjct: 307 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 366
Query: 357 SKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLLK--------- 416
+C P+++++T LI GYC +V+ M +++ + + + + +TY+ L++
Sbjct: 367 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 426
Query: 417 -ARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKL-SFHMKMNDKISGCLI 476
A ++F + H + D T+ I LDGLC NG L +A+E F L M + + +I
Sbjct: 427 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 486
Query: 477 NGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKMEENGIT 536
G+CK GK+E A +LF L KG+ +V+TY ++I G CK+G + +A+ L KMEE+G
Sbjct: 487 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 546
Query: 537 PDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDML 569
P+ YNTL+R + +L+ M D+S+ V+DML
Sbjct: 547 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022953742.1 | 1.8e-220 | 63.85 | putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [C... | [more] |
KAG7014482.1 | 1.2e-219 | 63.27 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG6575949.1 | 1.2e-219 | 63.27 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_038874245.1 | 1.7e-218 | 62.54 | pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benin... | [more] |
XP_022992036.1 | 2.2e-218 | 62.64 | pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q6NQ83 | 3.0e-93 | 35.01 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Q0WKV3 | 1.1e-90 | 34.41 | Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... | [more] |
Q9LPX2 | 1.9e-87 | 32.69 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... | [more] |
Q9SXD1 | 1.9e-87 | 33.68 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
P0C7Q7 | 9.2e-87 | 31.92 | Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GP31 | 8.6e-221 | 63.85 | putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... | [more] |
A0A6J1JSG4 | 1.1e-218 | 62.64 | pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima O... | [more] |
A0A6J1DSW3 | 9.8e-217 | 63.10 | pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti... | [more] |
A0A1S4DYL6 | 7.6e-185 | 58.95 | pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc... | [more] |
A0A5D3C8J0 | 7.6e-185 | 58.95 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |