Sed0014539 (gene) Chayote v1

Overview
NameSed0014539
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG11: 25158155 .. 25160564 (-)
RNA-Seq ExpressionSed0014539
SyntenySed0014539
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCCAGAACCGTTTCTTCATCTCTTTTCAAACGCAAGCTCTTGTCTATATTCACTCAATCGCCAACAATCGCATCTTCAAATCCCCGAAATTCGTCTCCAAATCGAATCAAATGCCGGCCAGTCCTCAATCCACCGCAAAAACTGACTTGCAAGAGAGGTACTGTTTCCTCATCACAAGCATTACATTTCTTTGATCTTATGATCTCTGCAAAACCCACCCCTGTTATGTCTTCATTCAATGTTTTACTTACTGGGCTTGTTAAGACTAAGCATTATTCTCAATTTTTTCAACTGTATACTCGAATGACCTTAGACGGGCTTTCGCCTGATCAAACCACCCTTACTATTTTGCTCAATTGCCTTTGTATTGCCAATCGCGTAGCTGAAGGTTTTGCGGCCGTGGCTAAGATTATAAGGGGAGATTATATTCTTAATGTAGTCACATATACGTCCATGATTAAGGGGTTGTGTATGAAACAAAGGATTAGTGAAGCTATACGATTGTTTACGAGAATGGAAATGTTGGGTTGCAAGCTTGATGAAATCACTTATGGGACTTTAATCAAAGGGCTTTGTCAAACGGGTAATACTAACATTGCACTTAAGTTGCATGAGGAAATGCTCGATGGAGATGGACGATACGGTATTAGTTGTAAGCCTGATCTTATTTGTTATAATACAATTATAGATGGTCTATGTAAAGAGGGGCTAGAAGACAAGGCGCGTGAACTTTTTGAGGAAATGAAAGCTCAACGATTGCTTCCTAATGTGGTTTCTTATAGCTCGTTGATTCATGGATTTGGTTATGCTGGAAAGTTGGAGGAGGCGAAACGTCTATTCACTGAGATGGTGGATCAAGGTGTTCAACCAAACGTGGTCACGTTTACTATGCTCAAGGCCGAAAATGTTACCAAGGCTAAAGAATTGTTTGAGATCATGATTCAAAGAGGTAATGTTCCTAGTTTAATTACTCATAATACATTGATCGACGGATTCTGTTTGGTTGGTGACATGAAAAGTGCGAGAGAACTGTTTGTTAGTATGTCAAGTAAGAGGTGTGAACCTAATGTGATTAGCTACACCATACTAATAAATGGCTATTGCAAAAATGGGAAGGTGGAAGTGGCGATGGACCTTTACAAAGAAATGCTTCAAGTGAGAATTAAGCCATCTTTAATAACATATAATTCCTTGTTAAAGGGTCTTTTTCAGGCAGCAAAGTTAAGGAAGCAAGGAAAATATTTGGTGTCATTAAAGATCATGATCTGTCATCAGATTCATTTACATTTAATATTTTTTTGGATGGGTTATGTAAGAATGGTTGTTTGTTAGAAGCAATGGAATTTTTTAATAAGCTCTCATTCCATATGAAAATGAACGACAAGATCTCTGGTTGTCTTATCAATGGACTATGTAAAGTAGGAAAACTTGAAATTGCTTTGGATCTTTTCGATAAATTATCCCATAAAGGGCTTCTTTCGGATGTTGTGACTTATAATATTTTGATTGATGGGTGTTGTAAGGAAGGACGAGTAGAAAAGGCAAGTAATTTGTTTTATAAGATGGAAGAAAATGGTATTACTCCCGATGTAACGGCTTATAATACACTCCTACGTGGTTTTTATGAAAACAATAAACAAGAGGGAGTAGTTGAACTTTTGCATAGGATGGTTCAGAAAAAAGTGGTGCCAGATTCTTCCACTTGCAACTTTGTCTTAGACATGCTTTCGAAAGATGAAAATTATTGGGACTGTTTGAACTCCCTTCCAACATTTCCCATCCAAGAGTGCTTAGGTTGATGGCAATTCAAATATCAATACACCAGTAATTTATGGTCATGTTGGGAAAATTGAAGCTCTGTTGGTGTACCTTGTTGCAATAATGTGTAGCTACCAAGTTTAAGCTGAGCAATCCTTGACTTCTGCCTCTCTGTTCTTACCTGTTTGCAAACTATATTATGGGTTCAATGTGTCAAACTGTCTCATAAGTTTGTAAGACTACTAAACAAAGTCAAGTTGCAAGGCTGATGTGATGTTGTGGTATTTTGCAAATAAATGTTTAAACTTTGGTTGTGAGAAAGAACTTGCTTTGACAGATGGTGGAGTTGTACTTCTTTACATACGAAGATTGATGTCATGTGTAAAGATGAGAGAGGTGTATCAATGCATTCTGGGTTTAAGAAGGAGCTGAAGAAACTTTTAATGGAAGATCAGAACGAAAATGGCGAAAAGAGCTTTCCGAGAGTGTTCAATCGGCTGAAGAAATGTGCAGAATACACGAAGATGGACAGCTTAAAAAATTGCTTGAATCTTGCGAGAAGCTTGAAAAGGGCGATGACGGCGTCTTTGAGTGCCATGAGGATATCAAATTTGTGCCATGTGAGAATAGTCACAAAAGTGACTGA

mRNA sequence

ATGGTTTCCAGAACCGTTTCTTCATCTCTTTTCAAACGCAAGCTCTTGTCTATATTCACTCAATCGCCAACAATCGCATCTTCAAATCCCCGAAATTCGTCTCCAAATCGAATCAAATGCCGGCCAGTCCTCAATCCACCGCAAAAACTGACTTGCAAGAGAGGTACTGTTTCCTCATCACAAGCATTACATTTCTTTGATCTTATGATCTCTGCAAAACCCACCCCTGTTATGTCTTCATTCAATGTTTTACTTACTGGGCTTGTTAAGACTAAGCATTATTCTCAATTTTTTCAACTGTATACTCGAATGACCTTAGACGGGCTTTCGCCTGATCAAACCACCCTTACTATTTTGCTCAATTGCCTTTGTATTGCCAATCGCGTAGCTGAAGGTTTTGCGGCCGTGGCTAAGATTATAAGGGGAGATTATATTCTTAATGTAGTCACATATACGTCCATGATTAAGGGGTTGTGTATGAAACAAAGGATTAGTGAAGCTATACGATTGTTTACGAGAATGGAAATGTTGGGTTGCAAGCTTGATGAAATCACTTATGGGACTTTAATCAAAGGGCTTTGTCAAACGGGTAATACTAACATTGCACTTAAGTTGCATGAGGAAATGCTCGATGGAGATGGACGATACGGTATTAGTTGTAAGCCTGATCTTATTTGTTATAATACAATTATAGATGGTCTATGTAAAGAGGGGCTAGAAGACAAGGCGCGTGAACTTTTTGAGGAAATGAAAGCTCAACGATTGCTTCCTAATGTGGTTTCTTATAGCTCGTTGATTCATGGATTTGGTTATGCTGGAAAGTTGGAGGAGGCGAAACGTCTATTCACTGAGATGGTGGATCAAGGTGTTCAACCAAACGTGGTCACGTTTACTATGCTCAAGGCCGAAAATGTTACCAAGGCTAAAGAATTGTTTGAGATCATGATTCAAAGAGGTAATGTTCCTAGTTTAATTACTCATAATACATTGATCGACGGATTCTGTTTGGTTGGTGACATGAAAAGTGCGAGAGAACTGTTTGTTAGTATGTCAAGTAAGAGGTGTGAACCTAATGTGATTAGCTACACCATACTAATAAATGGCTATTGCAAAAATGGGAAGGTGGAAGTGGCGATGGACCTTTACAAAGAAATGCTTCAAGTGAGAATTAAGCCATCTTTAATAACATATAATTCCTTGTTAAAGGCAAGGAAAATATTTGGTGTCATTAAAGATCATGATCTGTCATCAGATTCATTTACATTTAATATTTTTTTGGATGGGTTATGTAAGAATGGTTGTTTGTTAGAAGCAATGGAATTTTTTAATAAGCTCTCATTCCATATGAAAATGAACGACAAGATCTCTGGTTGTCTTATCAATGGACTATGTAAAGTAGGAAAACTTGAAATTGCTTTGGATCTTTTCGATAAATTATCCCATAAAGGGCTTCTTTCGGATGTTGTGACTTATAATATTTTGATTGATGGGTGTTGTAAGGAAGGACGAGTAGAAAAGGCAAGTAATTTGTTTTATAAGATGGAAGAAAATGGTATTACTCCCGATGTAACGGCTTATAATACACTCCTACGTGGTTTTTATGAAAACAATAAACAAGAGGGAGTAGTTGAACTTTTGCATAGGATGGTTCAGAAAAAAGTGGTGCCAGATTCTTCCACTTGCAACTTTGTCTTAGACATGCTTTCGAAAGATGAAAATTATTGGGACTGTTTGAACTCCCTTCCAACATTTCCCATCCAAGAGTGCTTAGAAGGAGCTGAAGAAACTTTTAATGGAAGATCAGAACGAAAATGGCGAAAAGAGCTTTCCGAGAGTGTTCAATCGGCTGAAGAAATGTGCAGAATACACGAAGATGGACAGCTTAAAAAATTGCTTGAATCTTGCGAGAAGCTTGAAAAGGGCGATGACGGCGTCTTTGAGTGCCATGAGGATATCAAATTTGTGCCATGTGAGAATAGTCACAAAAGTGACTGA

Coding sequence (CDS)

ATGGTTTCCAGAACCGTTTCTTCATCTCTTTTCAAACGCAAGCTCTTGTCTATATTCACTCAATCGCCAACAATCGCATCTTCAAATCCCCGAAATTCGTCTCCAAATCGAATCAAATGCCGGCCAGTCCTCAATCCACCGCAAAAACTGACTTGCAAGAGAGGTACTGTTTCCTCATCACAAGCATTACATTTCTTTGATCTTATGATCTCTGCAAAACCCACCCCTGTTATGTCTTCATTCAATGTTTTACTTACTGGGCTTGTTAAGACTAAGCATTATTCTCAATTTTTTCAACTGTATACTCGAATGACCTTAGACGGGCTTTCGCCTGATCAAACCACCCTTACTATTTTGCTCAATTGCCTTTGTATTGCCAATCGCGTAGCTGAAGGTTTTGCGGCCGTGGCTAAGATTATAAGGGGAGATTATATTCTTAATGTAGTCACATATACGTCCATGATTAAGGGGTTGTGTATGAAACAAAGGATTAGTGAAGCTATACGATTGTTTACGAGAATGGAAATGTTGGGTTGCAAGCTTGATGAAATCACTTATGGGACTTTAATCAAAGGGCTTTGTCAAACGGGTAATACTAACATTGCACTTAAGTTGCATGAGGAAATGCTCGATGGAGATGGACGATACGGTATTAGTTGTAAGCCTGATCTTATTTGTTATAATACAATTATAGATGGTCTATGTAAAGAGGGGCTAGAAGACAAGGCGCGTGAACTTTTTGAGGAAATGAAAGCTCAACGATTGCTTCCTAATGTGGTTTCTTATAGCTCGTTGATTCATGGATTTGGTTATGCTGGAAAGTTGGAGGAGGCGAAACGTCTATTCACTGAGATGGTGGATCAAGGTGTTCAACCAAACGTGGTCACGTTTACTATGCTCAAGGCCGAAAATGTTACCAAGGCTAAAGAATTGTTTGAGATCATGATTCAAAGAGGTAATGTTCCTAGTTTAATTACTCATAATACATTGATCGACGGATTCTGTTTGGTTGGTGACATGAAAAGTGCGAGAGAACTGTTTGTTAGTATGTCAAGTAAGAGGTGTGAACCTAATGTGATTAGCTACACCATACTAATAAATGGCTATTGCAAAAATGGGAAGGTGGAAGTGGCGATGGACCTTTACAAAGAAATGCTTCAAGTGAGAATTAAGCCATCTTTAATAACATATAATTCCTTGTTAAAGGCAAGGAAAATATTTGGTGTCATTAAAGATCATGATCTGTCATCAGATTCATTTACATTTAATATTTTTTTGGATGGGTTATGTAAGAATGGTTGTTTGTTAGAAGCAATGGAATTTTTTAATAAGCTCTCATTCCATATGAAAATGAACGACAAGATCTCTGGTTGTCTTATCAATGGACTATGTAAAGTAGGAAAACTTGAAATTGCTTTGGATCTTTTCGATAAATTATCCCATAAAGGGCTTCTTTCGGATGTTGTGACTTATAATATTTTGATTGATGGGTGTTGTAAGGAAGGACGAGTAGAAAAGGCAAGTAATTTGTTTTATAAGATGGAAGAAAATGGTATTACTCCCGATGTAACGGCTTATAATACACTCCTACGTGGTTTTTATGAAAACAATAAACAAGAGGGAGTAGTTGAACTTTTGCATAGGATGGTTCAGAAAAAAGTGGTGCCAGATTCTTCCACTTGCAACTTTGTCTTAGACATGCTTTCGAAAGATGAAAATTATTGGGACTGTTTGAACTCCCTTCCAACATTTCCCATCCAAGAGTGCTTAGAAGGAGCTGAAGAAACTTTTAATGGAAGATCAGAACGAAAATGGCGAAAAGAGCTTTCCGAGAGTGTTCAATCGGCTGAAGAAATGTGCAGAATACACGAAGATGGACAGCTTAAAAAATTGCTTGAATCTTGCGAGAAGCTTGAAAAGGGCGATGACGGCGTCTTTGAGTGCCATGAGGATATCAAATTTGTGCCATGTGAGAATAGTCACAAAAGTGACTGA

Protein sequence

MVSRTVSSSLFKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPPQKLTCKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTMLKAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLLKARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDMLSKDENYWDCLNSLPTFPIQECLEGAEETFNGRSERKWRKELSESVQSAEEMCRIHEDGQLKKLLESCEKLEKGDDGVFECHEDIKFVPCENSHKSD
Homology
BLAST of Sed0014539 vs. NCBI nr
Match: XP_022953742.1 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata])

HSP 1 Score: 776.5 bits (2004), Expect = 1.8e-220
Identity = 401/628 (63.85%), Postives = 478/628 (76.11%), Query Frame = 0

Query: 2   VSRTVSSSLFKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP-----------QKL 61
           +S ++S +  K KL S+FT+ P IASSNP+N SP   +  P+++ P           +K 
Sbjct: 10  ISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPEVSLEKS 69

Query: 62  T---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYS 121
           T               CK G  + S+AL FFDLM+ A PTP MSSFN+LL GL KTKHYS
Sbjct: 70  TTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLAKTKHYS 129

Query: 122 QFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMI 181
           +  +LY RM+L GL P+  TL ILLNCLC  NR++EG AA+A IIR  +I N+VTYTS+I
Sbjct: 130 EVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTYTSLI 189

Query: 182 KGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGR 241
           KGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLHEEML+G GR
Sbjct: 190 KGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGR 249

Query: 242 YGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKL 301
           YGISCKP++I Y+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLIHGF   GK 
Sbjct: 250 YGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKW 309

Query: 302 EEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVPSLITHNTL 361
           EEAK LF EMVD G+QPN VTF +L     KA  V +A EL E+MIQRGNVP L T+NTL
Sbjct: 310 EEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTL 369

Query: 362 IDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRI 421
           +DGFCLV D+ SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +Y EMLQV I
Sbjct: 370 MDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGI 429

Query: 422 KPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAME 481
           KPS+ITYN+LL           A+KIFGVI+ H L   S T +IF+DGLCKN CLLEAME
Sbjct: 430 KPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAME 489

Query: 482 FFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCK 541
            FN+LS+++K++  I  CLI+GLCK GKLE A + FDK+S +GLL +VVTY+ILI GCCK
Sbjct: 490 IFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCK 549

Query: 542 EGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSST 589
           EG+VEKA++LF KMEENG TP+V  YNTLLRGFY++NK+E VVELLHRMV+K VVPD+ST
Sbjct: 550 EGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDAST 609

BLAST of Sed0014539 vs. NCBI nr
Match: KAG7014482.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 773.9 bits (1997), Expect = 1.2e-219
Identity = 403/637 (63.27%), Postives = 480/637 (75.35%), Query Frame = 0

Query: 1   MVSRTVSSSL--------FKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP----- 60
           MVS+TV+S++         K KL S+FT+ P IASSNP+N SP   +  P+++ P     
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNV 60

Query: 61  ------QKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
                 +K T               CK G  + S+A  FFDLM+ A PTP MSSFN+LL 
Sbjct: 61  SPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLG 120

Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
           GL KTKHYS+  +LY RM+L GL P+  TL ILLNCLC  NR++EG AA+A IIR  +I 
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180

Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
           N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
           EEML+G GRYGISCKP++I Y+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
           HGF   GK EEAK LF EMVD G+QPN VTF +L     KA  V +A EL E+MIQRGNV
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNV 360

Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
           P L T+NTL+DGFCLV D+ SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
           Y EMLQV IKPS+ITYN+LL           A+KIFGVI+ H L   S T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
           N CLLEAME FN+LS+++K++  I  CLI+GLCK GKLE A + FDK+S +GLL +VVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540

Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 589
           +ILI GCCKEG+VEKA++LF KMEENG TP+V  YNTLLRGFY++NK+E VVELLHRMV+
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600

BLAST of Sed0014539 vs. NCBI nr
Match: KAG6575949.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 773.9 bits (1997), Expect = 1.2e-219
Identity = 403/637 (63.27%), Postives = 480/637 (75.35%), Query Frame = 0

Query: 1   MVSRTVSSSL--------FKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP----- 60
           MVS+TV+S++         K KL S+FT+ P IASSNP+N SP   +  P+++ P     
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNV 60

Query: 61  ------QKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
                 +K T               CK G  + S+A  FFDLM+ A PTP MSSFN+LL 
Sbjct: 61  SPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLG 120

Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
           GL KTKHYS+  +LY RM+L GL P+  TL ILLNCLC  NR++EG AA+A IIR  +I 
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIP 180

Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
           N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
           EEML+G GRYGISCKP++I Y+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
           HGF   GK EEAK LF EMVD G+QPN VTF +L     KA  V +A EL E+MIQRGNV
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNV 360

Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
           P L T+NTL+DGFCLV D+ SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
           Y EMLQV IKPS+ITYN+LL           A+KIFGVI+ H L   S T +IF+DGLCK
Sbjct: 421 YNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
           N CLLEAME FN+LS+++K++  I  CLI+GLCK GKLE A + FDK+S +GLL +VVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTY 540

Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 589
           +ILI GCCKEG+VEKA++LF KMEENG TP+V  YNTLLRGFY++NK+E VVELLHRMV+
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVK 600

BLAST of Sed0014539 vs. NCBI nr
Match: XP_038874245.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida] >XP_038874246.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida] >XP_038874247.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 770.0 bits (1987), Expect = 1.7e-218
Identity = 399/638 (62.54%), Postives = 480/638 (75.24%), Query Frame = 0

Query: 1   MVSRTVSSSLF--------KRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLN------- 60
           MVS+TV+S++F        K KL S+FT    +ASSNP+N  P   K  PVL+       
Sbjct: 1   MVSKTVASAIFPSLSPAPSKGKLSSLFTHPQRVASSNPQNPFPIPAKSPPVLSKLFKSTV 60

Query: 61  ----PPQKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
                P+K T               CK G  ++S+ L FFDLM+SA PTP M+SFN+LL 
Sbjct: 61  SPEISPEKSTSEISFQERLRTFLHNCKTGNFTASEGLQFFDLMMSANPTPAMASFNLLLG 120

Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
           GL K KHYS+ FQ+Y RM+L GL P+  T  ILLNCLC  NRV+EG AA+A IIR  Y  
Sbjct: 121 GLAKIKHYSEVFQVYYRMSLAGLLPNYITFNILLNCLCNVNRVSEGLAAMAGIIRRGYTP 180

Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
           N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
           EEML+G G YGI+CKP++ICY+TIIDGLCK+G EDKAR+LFEEMKAQR+LP+VVSYSSLI
Sbjct: 241 EEMLNGTGHYGINCKPNVICYSTIIDGLCKDGQEDKARKLFEEMKAQRMLPDVVSYSSLI 300

Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
           HGF ++G+ EEAK L  EMVDQG+QPN VTF +L     K   V +AK+L E+MIQRGN+
Sbjct: 301 HGFCHSGRWEEAKCLLNEMVDQGIQPNAVTFNVLMGMLCKVGQVIEAKKLLEVMIQRGNI 360

Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
           P L T+NTL+DGFCLVGD+ SARELF S+ SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFTYNTLMDGFCLVGDLHSARELFDSIPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
           Y EMLQ+ IKPS+ITYN+LL           A+KIFGVI+   L   S TF+IFLDGLCK
Sbjct: 421 YNEMLQMGIKPSVITYNALLMGLFQARKVNDAKKIFGVIQARGLVPSSCTFSIFLDGLCK 480

Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
           N CLLEAMEF+N+LS+++K+N  I  CLINGLCK  KLE A +LFDK SH+GLL +VVTY
Sbjct: 481 NDCLLEAMEFYNELSYNLKLNIDIFNCLINGLCKARKLETAWELFDKFSHEGLLPNVVTY 540

Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 590
           +ILI GCCKEG++EKA++LF KMEENG TP+V  YNTLL GFY +NK+E V+ELLHRMVQ
Sbjct: 541 SILIHGCCKEGQLEKANDLFRKMEENGCTPNVITYNTLLCGFYGSNKREEVIELLHRMVQ 600

BLAST of Sed0014539 vs. NCBI nr
Match: XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima])

HSP 1 Score: 769.6 bits (1986), Expect = 2.2e-218
Identity = 399/637 (62.64%), Postives = 478/637 (75.04%), Query Frame = 0

Query: 1   MVSRTVSSSL--------FKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP----- 60
           MVS+TV+S++         K KL S+FT    IASS P+N SP   +  PV++ P     
Sbjct: 1   MVSKTVASAISSSLLPAPSKGKLSSLFTHPTIIASSKPQNPSPISAESPPVISKPPNSNV 60

Query: 61  ------QKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
                 +K T               CK G  + S+AL FFDLM+ A PTP MSSFN+LL 
Sbjct: 61  SPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLG 120

Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
           GL KTKHYS+  +LY RM+L GL P+  TL ILLNCLC  NR++EG AA+A IIR  Y+ 
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGYVP 180

Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
           N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
           EEML+G GRYGISCKP++ICY+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
           HGF   GK EEAK LF EMVD G+QPN VTF +L     KA  V +A +L E+MIQRGNV
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEVMIQRGNV 360

Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
           P L  +NTL+DGFCLV D++SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
           Y EMLQV +KPS+ITYN+LL           A+KIFGVI+ H L   S T +IF+DGLCK
Sbjct: 421 YNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
           N CLLEAME FN+LS+++K++  I  CLI+GLCK GKLE A + FDK+S +G L +VVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNVVTY 540

Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 589
           +ILI GCCKEG+VEKA++LF KMEENG TP+V  YNTLLRGFY++NK+E VVELLHRMV 
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVN 600

BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.0e-93
Identity = 202/577 (35.01%), Postives = 312/577 (54.07%), Query Frame = 0

Query: 57  VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
           +  + A+  F+ MI ++P P    FN L + + +TK Y         M L+G+  D  T+
Sbjct: 49  IKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108

Query: 117 TILLNC-----------------------------------LCIANRVAEGFAAVAKIIR 176
           TI++NC                                    C+  RV+E  A V +++ 
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168

Query: 177 GDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNI 236
                ++VT +++I GLC+K R+SEA+ L  RM   G + DE+TYG ++  LC++GN+ +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228

Query: 237 ALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVS 296
           AL L  +M +       + K  ++ Y+ +ID LCK+G  D A  LF EM+ + +  +VV+
Sbjct: 229 ALDLFRKMEER------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 288

Query: 297 YSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMI 356
           YSSLI G    GK ++  ++  EM+ + + P+VVTF+ L     K   + +AKEL+  MI
Sbjct: 289 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 348

Query: 357 QRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVE 416
            RG  P  IT+N+LIDGFC    +  A ++F  M SK CEP++++Y+ILIN YCK  +V+
Sbjct: 349 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 408

Query: 417 VAMDLYKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFL 476
             M L++E+    + P+ ITYN+L+           A+++F  +    +     T+ I L
Sbjct: 409 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 468

Query: 477 DGLCKNGCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLL 536
           DGLC NG L +A+E F K+    M +   I   +I+G+C   K++ A  LF  LS KG+ 
Sbjct: 469 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 528

Query: 537 SDVVTYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVEL 580
            DVVTYN++I G CK+G + +A  LF KM+E+G TPD   YN L+R     +     VEL
Sbjct: 529 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 588

BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.1e-90
Identity = 192/558 (34.41%), Postives = 308/558 (55.20%), Query Frame = 0

Query: 57  VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
           + +  A+  F  MI ++P P +  F+ L + + KTK Y     L  +M L G++ +  TL
Sbjct: 67  IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126

Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
           +I++NC C   ++   F+A+ KII+  Y  N +T++++I GLC++ R+SEA+ L  RM  
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186

Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLD-----GDGRYG----ISCKP----- 236
           +G K D IT  TL+ GLC +G    A+ L ++M++         YG    + CK      
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246

Query: 237 ---------------DLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIH 296
                          D + Y+ IIDGLCK G  D A  LF EM+ + +  N+++Y+ LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306

Query: 297 GFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVP 356
           GF  AG+ ++  +L  +M+ + + PNVVTF++L     K   + +A+EL + MI RG  P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366

Query: 357 SLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLY 416
             IT+ +LIDGFC    +  A ++   M SK C+PN+ ++ ILINGYCK  +++  ++L+
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426

Query: 417 KEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCKN 476
           ++M    +    +TYN+L++          A+++F  +    +  +  T+ I LDGLC N
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 477 GCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 536
           G   +A+E F K+    M+++  I   +I+G+C   K++ A DLF  L  KG+   V TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546

Query: 537 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 570
           NI+I G CK+G + +A  LF KMEE+G  PD   YN L+R    +      V+L+  + +
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606

BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-87
Identity = 187/572 (32.69%), Postives = 311/572 (54.37%), Query Frame = 0

Query: 57  VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
           + +  A+  F  MI ++P P +  FN L + + KTK Y     L  +M   G++    TL
Sbjct: 67  IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126

Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
           +I++NC C   +++  F+ + KI++  Y  + V + +++ GLC++ R+SEA+ L  RM  
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186

Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLD-----GDGRYG----ISCKP----- 236
           +G K   IT  TL+ GLC  G  + A+ L + M++      +  YG    + CK      
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246

Query: 237 ---------------DLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIH 296
                          D + Y+ IIDGLCK+G  D A  LF EM+ +    ++++Y++LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 297 GFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVP 356
           GF  AG+ ++  +L  +M+ + + PNVVTF++L     K   + +A +L + M+QRG  P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 357 SLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLY 416
           + IT+N+LIDGFC    ++ A ++   M SK C+P+++++ ILINGYCK  +++  ++L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426

Query: 417 KEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCKN 476
           +EM    +  + +TYN+L++          A+K+F  +    +  D  ++ I LDGLC N
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486

Query: 477 GCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 536
           G L +A+E F K+    M+++  I   +I+G+C   K++ A DLF  L  KG+  D   Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546

Query: 537 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 581
           NI+I   C++  + KA  LF KM E G  PD   YN L+R    ++      EL+  M  
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606

BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-87
Identity = 193/573 (33.68%), Postives = 309/573 (53.93%), Query Frame = 0

Query: 62  ALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLN 121
           A+  F  M+ ++P P +  F+ LL+ + K   +     L  +M   G+  +  T +IL+N
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124

Query: 122 CLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAI------------- 181
           C C  +++    A + K+++  Y  N+VT +S++ G C  +RISEA+             
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 182 ----------------------RLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 241
                                  L  RM   GC+ D +TYG ++ GLC+ G+T++A  L 
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244

Query: 242 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 301
            +M  G        +P ++ YNTIIDGLCK    D A  LF+EM+ + + PNVV+YSSLI
Sbjct: 245 NKMEQG------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 304

Query: 302 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 361
                 G+  +A RL ++M+++ + P+V TF+ L     K   + +A++L++ M++R   
Sbjct: 305 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 364

Query: 362 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 421
           PS++T+++LI+GFC+   +  A+++F  M SK C P+V++Y  LI G+CK  +VE  M++
Sbjct: 365 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 424

Query: 422 YKEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCK 481
           ++EM Q  +  + +TYN L++          A++IF  +    +  +  T+N  LDGLCK
Sbjct: 425 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 484

Query: 482 NGCLLEAMEFFNKLSFHMKMNDKI--SGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVV 541
           NG L +AM  F  L    KM   I     +I G+CK GK+E   DLF  LS KG+  DVV
Sbjct: 485 NGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 544

Query: 542 TYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRM 580
            YN +I G C++G  E+A  LF +M+E+G  P+   YNTL+R    +  +E   EL+  M
Sbjct: 545 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 604

BLAST of Sed0014539 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.2e-87
Identity = 173/542 (31.92%), Postives = 306/542 (56.46%), Query Frame = 0

Query: 57  VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
           +    A+  F  MI ++P P +  F+   + + +TK ++       ++ L+G++ +  TL
Sbjct: 67  IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126

Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
            I++NC C   +    ++ + K+++  Y  +  T+ ++IKGL ++ ++SEA+ L  RM  
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186

Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCK 236
            GC+ D +TY +++ G+C++G+T++AL L  +M +       + K D+  Y+TIID LC+
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER------NVKADVFTYSTIIDSLCR 246

Query: 237 EGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVT 296
           +G  D A  LF+EM+ + +  +VV+Y+SL+ G   AGK  +   L  +MV + + PNV+T
Sbjct: 247 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 306

Query: 297 FTML-----KAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMS 356
           F +L     K   + +A EL++ MI RG  P++IT+NTL+DG+C+   +  A  +   M 
Sbjct: 307 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 366

Query: 357 SKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLLK--------- 416
             +C P+++++T LI GYC   +V+  M +++ + +  +  + +TY+ L++         
Sbjct: 367 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 426

Query: 417 -ARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKL-SFHMKMNDKISGCLI 476
            A ++F  +  H +  D  T+ I LDGLC NG L +A+E F  L    M +   +   +I
Sbjct: 427 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 486

Query: 477 NGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKMEENGIT 536
            G+CK GK+E A +LF  L  KG+  +V+TY ++I G CK+G + +A+ L  KMEE+G  
Sbjct: 487 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 546

Query: 537 PDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDML---SKDENYWDC 580
           P+   YNTL+R    +       +L+  M       D+S+   V+DML     D+++ D 
Sbjct: 547 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 602

BLAST of Sed0014539 vs. ExPASy TrEMBL
Match: A0A6J1GP31 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456184 PE=4 SV=1)

HSP 1 Score: 776.5 bits (2004), Expect = 8.6e-221
Identity = 401/628 (63.85%), Postives = 478/628 (76.11%), Query Frame = 0

Query: 2   VSRTVSSSLFKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP-----------QKL 61
           +S ++S +  K KL S+FT+ P IASSNP+N SP   +  P+++ P           +K 
Sbjct: 10  ISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPEVSLEKS 69

Query: 62  T---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYS 121
           T               CK G  + S+AL FFDLM+ A PTP MSSFN+LL GL KTKHYS
Sbjct: 70  TTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLAKTKHYS 129

Query: 122 QFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMI 181
           +  +LY RM+L GL P+  TL ILLNCLC  NR++EG AA+A IIR  +I N+VTYTS+I
Sbjct: 130 EVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTYTSLI 189

Query: 182 KGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGR 241
           KGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLHEEML+G GR
Sbjct: 190 KGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGR 249

Query: 242 YGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKL 301
           YGISCKP++I Y+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLIHGF   GK 
Sbjct: 250 YGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKW 309

Query: 302 EEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVPSLITHNTL 361
           EEAK LF EMVD G+QPN VTF +L     KA  V +A EL E+MIQRGNVP L T+NTL
Sbjct: 310 EEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTL 369

Query: 362 IDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRI 421
           +DGFCLV D+ SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +Y EMLQV I
Sbjct: 370 MDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGI 429

Query: 422 KPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAME 481
           KPS+ITYN+LL           A+KIFGVI+ H L   S T +IF+DGLCKN CLLEAME
Sbjct: 430 KPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAME 489

Query: 482 FFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCK 541
            FN+LS+++K++  I  CLI+GLCK GKLE A + FDK+S +GLL +VVTY+ILI GCCK
Sbjct: 490 IFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCK 549

Query: 542 EGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSST 589
           EG+VEKA++LF KMEENG TP+V  YNTLLRGFY++NK+E VVELLHRMV+K VVPD+ST
Sbjct: 550 EGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDAST 609

BLAST of Sed0014539 vs. ExPASy TrEMBL
Match: A0A6J1JSG4 (pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima OX=3661 GN=LOC111488506 PE=4 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 1.1e-218
Identity = 399/637 (62.64%), Postives = 478/637 (75.04%), Query Frame = 0

Query: 1   MVSRTVSSSL--------FKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPP----- 60
           MVS+TV+S++         K KL S+FT    IASS P+N SP   +  PV++ P     
Sbjct: 1   MVSKTVASAISSSLLPAPSKGKLSSLFTHPTIIASSKPQNPSPISAESPPVISKPPNSNV 60

Query: 61  ------QKLT---------------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLT 120
                 +K T               CK G  + S+AL FFDLM+ A PTP MSSFN+LL 
Sbjct: 61  SPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLG 120

Query: 121 GLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYIL 180
           GL KTKHYS+  +LY RM+L GL P+  TL ILLNCLC  NR++EG AA+A IIR  Y+ 
Sbjct: 121 GLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGYVP 180

Query: 181 NVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 240
           N+VTYTS+IKGLCM+ RISEA RLF RM+ LGC+ + ITYGTLIKGLCQTGNTNIALKLH
Sbjct: 181 NIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLH 240

Query: 241 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 300
           EEML+G GRYGISCKP++ICY+TIIDGLCK+G EDKARELFEEMKA+R+LP+V+SYSSLI
Sbjct: 241 EEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLI 300

Query: 301 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 360
           HGF   GK EEAK LF EMVD G+QPN VTF +L     KA  V +A +L E+MIQRGNV
Sbjct: 301 HGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEVMIQRGNV 360

Query: 361 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 420
           P L  +NTL+DGFCLV D++SARELF+SM SK CEPNVISY +LINGYCKN KVE AM +
Sbjct: 361 PDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKI 420

Query: 421 YKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCK 480
           Y EMLQV +KPS+ITYN+LL           A+KIFGVI+ H L   S T +IF+DGLCK
Sbjct: 421 YNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDGLCK 480

Query: 481 NGCLLEAMEFFNKLSFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 540
           N CLLEAME FN+LS+++K++  I  CLI+GLCK GKLE A + FDK+S +G L +VVTY
Sbjct: 481 NDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNVVTY 540

Query: 541 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 589
           +ILI GCCKEG+VEKA++LF KMEENG TP+V  YNTLLRGFY++NK+E VVELLHRMV 
Sbjct: 541 SILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVN 600

BLAST of Sed0014539 vs. ExPASy TrEMBL
Match: A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)

HSP 1 Score: 763.1 bits (1969), Expect = 9.8e-217
Identity = 395/626 (63.10%), Postives = 472/626 (75.40%), Query Frame = 0

Query: 7   SSSLFKRKLLSIFTQSPTIASSNPRNSSPNRIKCRPVLNPPQKLT--------------- 66
           SS+  K KL S+FTQSP I SSNP+ S  +  K  P+L+ P K T               
Sbjct: 17  SSAPAKGKLSSLFTQSPRIRSSNPQVSPGSSSKRPPLLSRPPKPTVSPEDSPEELTTGIS 76

Query: 67  -----------CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQL 126
                      CK G V++++AL FFDLM+  KPTP MSSFN+LL GL K KHYS+   L
Sbjct: 77  FQDRHRTFLQNCKTGNVTAAEALQFFDLMLRTKPTPAMSSFNLLLGGLAKIKHYSEVLSL 136

Query: 127 YTRMTLDGLSPDQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCM 186
           Y RM+L G+ P+  TL ILLNCLC  NRV+EG AA+A IIR  YI N+VTYTS+IKGLCM
Sbjct: 137 YDRMSLAGILPNYITLNILLNCLCNVNRVSEGLAAMAGIIRRGYIPNIVTYTSLIKGLCM 196

Query: 187 KQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISC 246
           + RISEA RLF RM+ LGC  + ITYGTLIKGLCQTGNTNIALKLHEEML+G GRYGI+C
Sbjct: 197 EHRISEATRLFMRMQKLGCTPNVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYGITC 256

Query: 247 KPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKR 306
           KP++ICY+TIIDGLCK+GLEDKARELFEEMKAQ +LP+V+SYSSLIHGF Y GK EEAK 
Sbjct: 257 KPNVICYSTIIDGLCKDGLEDKARELFEEMKAQGMLPDVISYSSLIHGFCYGGKWEEAKS 316

Query: 307 LFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRG-NVPSLITHNTLIDGF 366
           LF EMVD GVQPNVVTF +L     KA  V +AKEL E+M+Q G N P L T+NTL+DGF
Sbjct: 317 LFNEMVDHGVQPNVVTFNVLMDMLCKAGKVIEAKELLELMVQGGNNAPDLFTYNTLMDGF 376

Query: 367 CLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSL 426
           CLVGD+ SARELF++M +K CEPNVISY +LINGYCKN K+E AM LY EMLQV I+PS+
Sbjct: 377 CLVGDLNSARELFINMPNKGCEPNVISYNVLINGYCKNWKMEEAMKLYNEMLQVGIRPSV 436

Query: 427 ITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNK 486
           ITYNSLL           A+K+FGVI+ + L+  S T++ FLDGLCKN CLLEA+E FN 
Sbjct: 437 ITYNSLLTGLFQAGMVVDAKKLFGVIQANGLAPSSSTYSTFLDGLCKNDCLLEAIELFNG 496

Query: 487 LS-FHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGR 546
           L  +++K+N +I  CLI+GLCK GKLE A +LFDK S +GLL +VVTY+I+I G CK+G+
Sbjct: 497 LKPYNLKLNIEIFNCLIDGLCKAGKLETAWELFDKFSLEGLLPNVVTYSIMIHGLCKDGQ 556

Query: 547 VEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNF 590
           +EKA +LF KMEENG TP++  YNTL+RGFYENNK E VVELLHRMV+K V+PD+STC  
Sbjct: 557 LEKAIDLFRKMEENGCTPNIITYNTLMRGFYENNKPEEVVELLHRMVKKNVLPDASTCTI 616

BLAST of Sed0014539 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 7.6e-185
Identity = 326/553 (58.95%), Postives = 417/553 (75.41%), Query Frame = 0

Query: 52  CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSP 111
           CK G ++++QA HFFDLM+ + P P +SSF+ LL GL K KHYS  F LY +M L GLSP
Sbjct: 14  CKTGNITATQAFHFFDLMLRSYPIPPISSFDCLLGGLAKIKHYSLLFSLYNKMRLAGLSP 73

Query: 112 DQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLF 171
              TL IL+NCLC  NRV+E  A +A ++R  YI NVVTYT++IKGLCM+ RISEA RLF
Sbjct: 74  SAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 133

Query: 172 TRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTII 231
            RM+ LGC  + +TYGTL+KGLCQTGN NIALKLH+EML+   +YGI+CKP++  YN II
Sbjct: 134 LRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNYNIII 193

Query: 232 DGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQ 291
           DGLCK G ED+A ELFEEMKAQ ++PNV+SYSSLIHGF  A K EE+KRLF EMVDQGVQ
Sbjct: 194 DGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVDQGVQ 253

Query: 292 PNVVTF-----TMLKAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSAREL 351
           P+ VTF     T+ K   V +AK+LFE+MIQRG VP L  +++L++GFC+VGD+ SAREL
Sbjct: 254 PDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGDLNSAREL 313

Query: 352 FVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLL----- 411
           FVSM SK CEP+VISYT+LINGYCK  KVE AM LY EML V  +P++ITY +LL     
Sbjct: 314 FVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALLTGLFL 373

Query: 412 -----KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKL-SFHMKMNDKI 471
                 A+K+F  +K   +S++S  + I LDGLCKNGCL EAM+ F +L S++ K++ + 
Sbjct: 374 AGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFKLDIET 433

Query: 472 SGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKME 531
             CLI+GLCK GKLE A +LF+KLS +GL  +VVTY+I+I G C+EG+V+KA+ L  KME
Sbjct: 434 YSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVLIQKME 493

Query: 532 ENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDMLSKDENYW 589
            NG  P++  YNTL+RGFYE+NK + VV+LLH MV+K V+PD++TC+ V+DML KDE Y 
Sbjct: 494 TNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCKDEKYQ 553

BLAST of Sed0014539 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 7.6e-185
Identity = 326/553 (58.95%), Postives = 417/553 (75.41%), Query Frame = 0

Query: 52  CKRGTVSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSP 111
           CK G ++++QA HFFDLM+ + P P +SSF+ LL GL K KHYS  F LY +M L GLSP
Sbjct: 14  CKTGNITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLLFSLYNKMRLAGLSP 73

Query: 112 DQTTLTILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLF 171
              TL IL+NCLC  NRV+E  A +A ++R  YI NVVTYT++IKGLCM+ RISEA RLF
Sbjct: 74  SAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 133

Query: 172 TRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTII 231
            RM+ LGC  + +TYGTL+KGLCQTGN NIALKLH+EML+   +YGI+CKP++  YN II
Sbjct: 134 LRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNYNIII 193

Query: 232 DGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQ 291
           DGLCK G ED+A ELFEEMKAQ ++PNV+SYSSLIHGF  A K EE+KRLF EMVDQGVQ
Sbjct: 194 DGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVDQGVQ 253

Query: 292 PNVVTF-----TMLKAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSAREL 351
           P+ VTF     T+ K   V +AK+LFE+MIQRG VP L  +++L++GFC+VGD+ SAREL
Sbjct: 254 PDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGDLNSAREL 313

Query: 352 FVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLL----- 411
           FVSM SK CEP+VISYT+LINGYCK  KVE AM LY EML V  +P++ITY +LL     
Sbjct: 314 FVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALLTGLFL 373

Query: 412 -----KARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKL-SFHMKMNDKI 471
                 A+K+F  +K   +S++S  + I LDGLCKNGCL EAM+ F +L S++ K++ + 
Sbjct: 374 AGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFKLDIET 433

Query: 472 SGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKME 531
             CLI+GLCK GKLE A +LF+KLS +GL  +VVTY+I+I G C+EG+V+KA+ L  KME
Sbjct: 434 YSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVLIQKME 493

Query: 532 ENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDMLSKDENYW 589
            NG  P++  YNTL+RGFYE+NK + VV+LLH MV+K V+PD++TC+ V+DML KDE Y 
Sbjct: 494 TNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCKDEKYQ 553

BLAST of Sed0014539 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 344.4 bits (882), Expect = 2.1e-94
Identity = 202/577 (35.01%), Postives = 312/577 (54.07%), Query Frame = 0

Query: 57  VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
           +  + A+  F+ MI ++P P    FN L + + +TK Y         M L+G+  D  T+
Sbjct: 49  IKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108

Query: 117 TILLNC-----------------------------------LCIANRVAEGFAAVAKIIR 176
           TI++NC                                    C+  RV+E  A V +++ 
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168

Query: 177 GDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNI 236
                ++VT +++I GLC+K R+SEA+ L  RM   G + DE+TYG ++  LC++GN+ +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228

Query: 237 ALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVS 296
           AL L  +M +       + K  ++ Y+ +ID LCK+G  D A  LF EM+ + +  +VV+
Sbjct: 229 ALDLFRKMEER------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 288

Query: 297 YSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMI 356
           YSSLI G    GK ++  ++  EM+ + + P+VVTF+ L     K   + +AKEL+  MI
Sbjct: 289 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 348

Query: 357 QRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVE 416
            RG  P  IT+N+LIDGFC    +  A ++F  M SK CEP++++Y+ILIN YCK  +V+
Sbjct: 349 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 408

Query: 417 VAMDLYKEMLQVRIKPSLITYNSLL----------KARKIFGVIKDHDLSSDSFTFNIFL 476
             M L++E+    + P+ ITYN+L+           A+++F  +    +     T+ I L
Sbjct: 409 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 468

Query: 477 DGLCKNGCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLL 536
           DGLC NG L +A+E F K+    M +   I   +I+G+C   K++ A  LF  LS KG+ 
Sbjct: 469 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 528

Query: 537 SDVVTYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVEL 580
            DVVTYN++I G CK+G + +A  LF KM+E+G TPD   YN L+R     +     VEL
Sbjct: 529 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 588

BLAST of Sed0014539 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 335.9 bits (860), Expect = 7.5e-92
Identity = 192/558 (34.41%), Postives = 308/558 (55.20%), Query Frame = 0

Query: 57  VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
           + +  A+  F  MI ++P P +  F+ L + + KTK Y     L  +M L G++ +  TL
Sbjct: 67  IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126

Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
           +I++NC C   ++   F+A+ KII+  Y  N +T++++I GLC++ R+SEA+ L  RM  
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186

Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLD-----GDGRYG----ISCKP----- 236
           +G K D IT  TL+ GLC +G    A+ L ++M++         YG    + CK      
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246

Query: 237 ---------------DLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIH 296
                          D + Y+ IIDGLCK G  D A  LF EM+ + +  N+++Y+ LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306

Query: 297 GFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVP 356
           GF  AG+ ++  +L  +M+ + + PNVVTF++L     K   + +A+EL + MI RG  P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366

Query: 357 SLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLY 416
             IT+ +LIDGFC    +  A ++   M SK C+PN+ ++ ILINGYCK  +++  ++L+
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426

Query: 417 KEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCKN 476
           ++M    +    +TYN+L++          A+++F  +    +  +  T+ I LDGLC N
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 477 GCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 536
           G   +A+E F K+    M+++  I   +I+G+C   K++ A DLF  L  KG+   V TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546

Query: 537 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 570
           NI+I G CK+G + +A  LF KMEE+G  PD   YN L+R    +      V+L+  + +
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606

BLAST of Sed0014539 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 325.1 bits (832), Expect = 1.3e-88
Identity = 193/573 (33.68%), Postives = 309/573 (53.93%), Query Frame = 0

Query: 62  ALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTLTILLN 121
           A+  F  M+ ++P P +  F+ LL+ + K   +     L  +M   G+  +  T +IL+N
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124

Query: 122 CLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAI------------- 181
           C C  +++    A + K+++  Y  N+VT +S++ G C  +RISEA+             
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 182 ----------------------RLFTRMEMLGCKLDEITYGTLIKGLCQTGNTNIALKLH 241
                                  L  RM   GC+ D +TYG ++ GLC+ G+T++A  L 
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244

Query: 242 EEMLDGDGRYGISCKPDLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLI 301
            +M  G        +P ++ YNTIIDGLCK    D A  LF+EM+ + + PNVV+YSSLI
Sbjct: 245 NKMEQG------KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 304

Query: 302 HGFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNV 361
                 G+  +A RL ++M+++ + P+V TF+ L     K   + +A++L++ M++R   
Sbjct: 305 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 364

Query: 362 PSLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDL 421
           PS++T+++LI+GFC+   +  A+++F  M SK C P+V++Y  LI G+CK  +VE  M++
Sbjct: 365 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 424

Query: 422 YKEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCK 481
           ++EM Q  +  + +TYN L++          A++IF  +    +  +  T+N  LDGLCK
Sbjct: 425 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 484

Query: 482 NGCLLEAMEFFNKLSFHMKMNDKI--SGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVV 541
           NG L +AM  F  L    KM   I     +I G+CK GK+E   DLF  LS KG+  DVV
Sbjct: 485 NGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 544

Query: 542 TYNILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRM 580
            YN +I G C++G  E+A  LF +M+E+G  P+   YNTL+R    +  +E   EL+  M
Sbjct: 545 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 604

BLAST of Sed0014539 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 325.1 bits (832), Expect = 1.3e-88
Identity = 187/572 (32.69%), Postives = 311/572 (54.37%), Query Frame = 0

Query: 57  VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
           + +  A+  F  MI ++P P +  FN L + + KTK Y     L  +M   G++    TL
Sbjct: 67  IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126

Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
           +I++NC C   +++  F+ + KI++  Y  + V + +++ GLC++ R+SEA+ L  RM  
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186

Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLD-----GDGRYG----ISCKP----- 236
           +G K   IT  TL+ GLC  G  + A+ L + M++      +  YG    + CK      
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246

Query: 237 ---------------DLICYNTIIDGLCKEGLEDKARELFEEMKAQRLLPNVVSYSSLIH 296
                          D + Y+ IIDGLCK+G  D A  LF EM+ +    ++++Y++LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 297 GFGYAGKLEEAKRLFTEMVDQGVQPNVVTFTML-----KAENVTKAKELFEIMIQRGNVP 356
           GF  AG+ ++  +L  +M+ + + PNVVTF++L     K   + +A +L + M+QRG  P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 357 SLITHNTLIDGFCLVGDMKSARELFVSMSSKRCEPNVISYTILINGYCKNGKVEVAMDLY 416
           + IT+N+LIDGFC    ++ A ++   M SK C+P+++++ ILINGYCK  +++  ++L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426

Query: 417 KEMLQVRIKPSLITYNSLLK----------ARKIFGVIKDHDLSSDSFTFNIFLDGLCKN 476
           +EM    +  + +TYN+L++          A+K+F  +    +  D  ++ I LDGLC N
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486

Query: 477 GCLLEAMEFFNKL-SFHMKMNDKISGCLINGLCKVGKLEIALDLFDKLSHKGLLSDVVTY 536
           G L +A+E F K+    M+++  I   +I+G+C   K++ A DLF  L  KG+  D   Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546

Query: 537 NILIDGCCKEGRVEKASNLFYKMEENGITPDVTAYNTLLRGFYENNKQEGVVELLHRMVQ 581
           NI+I   C++  + KA  LF KM E G  PD   YN L+R    ++      EL+  M  
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606

BLAST of Sed0014539 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 321.2 bits (822), Expect = 1.9e-87
Identity = 170/528 (32.20%), Postives = 299/528 (56.63%), Query Frame = 0

Query: 57  VSSSQALHFFDLMISAKPTPVMSSFNVLLTGLVKTKHYSQFFQLYTRMTLDGLSPDQTTL 116
           +    A+  F  MI ++P P +  F+   + + +TK ++       ++ L+G++ +  TL
Sbjct: 67  IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126

Query: 117 TILLNCLCIANRVAEGFAAVAKIIRGDYILNVVTYTSMIKGLCMKQRISEAIRLFTRMEM 176
            I++NC C   +    ++ + K+++  Y  +  T+ ++IKGL ++ ++SEA+ L  RM  
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186

Query: 177 LGCKLDEITYGTLIKGLCQTGNTNIALKLHEEMLDGDGRYGISCKPDLICYNTIIDGLCK 236
            GC+ D +TY +++ G+C++G+T++AL L  +M +       + K D+  Y+TIID LC+
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER------NVKADVFTYSTIIDSLCR 246

Query: 237 EGLEDKARELFEEMKAQRLLPNVVSYSSLIHGFGYAGKLEEAKRLFTEMVDQGVQPNVVT 296
           +G  D A  LF+EM+ + +  +VV+Y+SL+ G   AGK  +   L  +MV + + PNV+T
Sbjct: 247 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 306

Query: 297 FTML-----KAENVTKAKELFEIMIQRGNVPSLITHNTLIDGFCLVGDMKSARELFVSMS 356
           F +L     K   + +A EL++ MI RG  P++IT+NTL+DG+C+   +  A  +   M 
Sbjct: 307 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 366

Query: 357 SKRCEPNVISYTILINGYCKNGKVEVAMDLYKEMLQVRIKPSLITYNSLLK--------- 416
             +C P+++++T LI GYC   +V+  M +++ + +  +  + +TY+ L++         
Sbjct: 367 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 426

Query: 417 -ARKIFGVIKDHDLSSDSFTFNIFLDGLCKNGCLLEAMEFFNKL-SFHMKMNDKISGCLI 476
            A ++F  +  H +  D  T+ I LDGLC NG L +A+E F  L    M +   +   +I
Sbjct: 427 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 486

Query: 477 NGLCKVGKLEIALDLFDKLSHKGLLSDVVTYNILIDGCCKEGRVEKASNLFYKMEENGIT 536
            G+CK GK+E A +LF  L  KG+  +V+TY ++I G CK+G + +A+ L  KMEE+G  
Sbjct: 487 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 546

Query: 537 PDVTAYNTLLRGFYENNKQEGVVELLHRMVQKKVVPDSSTCNFVLDML 569
           P+   YNTL+R    +       +L+  M       D+S+   V+DML
Sbjct: 547 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022953742.11.8e-22063.85putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [C... [more]
KAG7014482.11.2e-21963.27Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6575949.11.2e-21963.27Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_038874245.11.7e-21862.54pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benin... [more]
XP_022992036.12.2e-21862.64pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q6NQ833.0e-9335.01Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
Q0WKV31.1e-9034.41Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Q9LPX21.9e-8732.69Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
Q9SXD11.9e-8733.68Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
P0C7Q79.2e-8731.92Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Match NameE-valueIdentityDescription
A0A6J1GP318.6e-22163.85putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
A0A6J1JSG41.1e-21862.64pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima O... [more]
A0A6J1DSW39.8e-21763.10pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti... [more]
A0A1S4DYL67.6e-18558.95pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc... [more]
A0A5D3C8J07.6e-18558.95Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT3G22470.12.1e-9435.01Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12300.17.5e-9234.41Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62670.11.3e-8833.68rna processing factor 2 [more]
AT1G12775.11.3e-8832.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12700.11.9e-8732.20ATP binding;nucleic acid binding;helicases [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 236..256
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 402..572
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 339..495
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 147..404
coord: 52..210
NoneNo IPR availablePANTHERPTHR45613:SF324OS06G0690900 PROTEINcoord: 339..495
NoneNo IPR availablePANTHERPTHR45613:SF324OS06G0690900 PROTEINcoord: 52..210
coord: 402..572
NoneNo IPR availablePANTHERPTHR45613:SF324OS06G0690900 PROTEINcoord: 147..404
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 266..414
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 49..136
e-value: 3.6E-11
score: 44.7
coord: 214..300
e-value: 3.5E-30
score: 106.7
coord: 301..403
e-value: 1.1E-32
score: 114.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 448..652
e-value: 1.5E-35
score: 125.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 137..213
e-value: 1.6E-20
score: 75.4
coord: 404..447
e-value: 2.3E-5
score: 26.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 79..124
e-value: 4.5E-9
score: 36.4
coord: 357..403
e-value: 2.3E-15
score: 56.5
coord: 222..269
e-value: 2.7E-14
score: 53.1
coord: 487..533
e-value: 1.3E-16
score: 60.5
coord: 147..195
e-value: 1.0E-15
score: 57.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 260..294
e-value: 6.7E-9
score: 33.4
coord: 149..183
e-value: 3.9E-8
score: 31.0
coord: 360..393
e-value: 2.0E-10
score: 38.2
coord: 184..211
e-value: 6.9E-5
score: 20.8
coord: 80..112
e-value: 0.001
score: 17.1
coord: 525..558
e-value: 4.5E-4
score: 18.2
coord: 325..359
e-value: 1.1E-8
score: 32.8
coord: 458..487
e-value: 2.7E-4
score: 18.9
coord: 225..259
e-value: 2.8E-10
score: 37.7
coord: 489..523
e-value: 9.3E-13
score: 45.5
coord: 420..445
e-value: 5.5E-5
score: 21.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 458..483
e-value: 4.2E-4
score: 20.4
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 415..444
e-value: 1.9E-7
score: 30.7
coord: 321..350
e-value: 1.3E-8
score: 34.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 258..292
score: 13.405727
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..181
score: 11.904029
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 418..448
score: 9.141782
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 13.42765
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 223..257
score: 12.956314
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 522..556
score: 10.588674
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..212
score: 10.073492
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 487..521
score: 14.995116
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 452..486
score: 9.174665

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0014539.1Sed0014539.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050794 regulation of cellular process
molecular_function GO:0005515 protein binding