Sed0014417 (gene) Chayote v1

Overview


Name	Sed0014417
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG10: 5923305 .. 5925982 (-)
RNA-Seq Expression	Sed0014417
Synteny	Sed0014417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACTTGAAAACGAATGAGAAAATAAGAGGGAAAATCACAAATCATTTGAGGGTGAAGCAATCCGCCGATTTCACCATCTCTTTTGATTTCTCCGATTCCGAAAGATTTCAGGAATATCGAAATTTCTTTTGATTTTAGATTTCCCCCTTTTTTTTCTCTCAAAATTCTCCATTTTGTATCGTTTATAAATGAACTCAAAATTCTCCATAAGATTTTGATTGAGTCGAGTCCCAAAATTGTAAGCAAGTTTTGTTTAGATGCTTTCTGGGTTTATGAGAATTTTCGTTTTTTGTTTCTTCTTGAAATTGATCGGTTTTGAATTTTAGCGATTTCTTGTTGTTGACAAAATCGTGGGTTGGAACTGCGTTTTAGTAATTGTAGAAGAAATTTCAGGGAGCTCCATTTTGATCTTTTTGAGATAAAATTTTCTCATTTTCTGTATGGAGATTACTGCATCATACAGGTGCCATCTCCCACTCCTTCCCATTTTGAGATTTTAATCGGAATCGGAGTTTCGCCCCACTACATACCCGAGAGCACCCGCGCCATGGCGGTGTCTTTCAGCCGGTTTTCGTCGTGGTTTTGGAATGGGAAGGGGAAAGAAAAGCCTGTTCCAAATGGGGTTTCTTCAAATTCTTCAACTGAGTTTGGTAATGGATTGAGAGAAGCGGAGAGTGTAGAATTGAACAAGGGGGTGGATTTGGGTTCATCAAGGAAGAAGGATAAGAACCAGAATTTGAAAAGTAAGAAGGAAACAACAAGGATTGTTGATTGGGAATGTGATTTTGTGATGGTGCAAGGTGATGACATTGCTGATGAGGCTGATTGGTCCATTGGCTGGTTGGAGCCTCAGGGTCCTGGCTTTAAGAATGAGGATAGTTTTGCAGTTTTGGTTCCTTCTTATAGCAATCGTTGCAAGGAAATTGTGGAGGGTTCAAACGTGGAGCTTTTGGCTGCAATTCAAAACCTTCAAAATGAATTCTCACCTGGTAAGCTATTTCTGGTGTTTCTTTTACTGTTATTTATTCCAATGCTTTTGTTTGTTTTTGAAGAGCAAACTTGTTGATAGAGACTCGGGAACTCTCCTTCCTCAACTTAAATTTCTTATTGTCTCTCGAGCCTGCACCTCTAGATGAGTGCGGGTGTGGGTAGGAGTGTACATGCTCCAGGCTGGATTAGGTTACGGAGATTTTTACTTAAAGTTTTGGATTGTTTAATTCTCCAAACCATCCAAAGGTATGTATTAGAGTAGCCGAACTCTATATTTTTGGGTTGGGTTGCCTTGGTTTTAATCAATTAGAGTTGGGTTAGGTTGAACGAGATAAAAATTGATAATCTAGAACTATCTCAACAAAAAATAGAAATTCATATCCAATCCAACCCAAATAAAGTTATAACCCAACACAATCTTATATTGGTTGGATAGTTGGGGTTGGTAAAGTTGTCGGTTCTTTTATATACCCTTACTAGTGGGAGACTAATGAGGAACTGGGGAAGCTCTGATTCCCTGTTATCATTTTTTTTTTTTGAGCTATTTGTTTATAGATTTGTTCATGGCCATAGCAGTTTGACTTGCTTGTTCTTACATGATTCTTTAGTTGATTTTGGAAGTGGAAAATATGGAGTGTTTCTTTGTGTTTTTAGTGTGGTTACTGCTGCAATTGGGGGATTGGATGGTTTTTTAAGAGACACGGTCTTGAAATTTGGAGCACATTCATTGGCTGTTTTGGGGCGGTTTTCGGTAATGGTGATCGATAAAAGTGTAAACGTTAAGGTTTTGATTTTCAAAGGAAGAACAATTTTAATTGGTTTAAAAAATAGGCTACGTGGTAGAACAAACTGGGAAATAGGATTTGAAAACAACTTTTAATGGACAGTTACATGCACATTGTTTTTCTTTAATTCTTGTCAAAGAACAGAATGCTTTTGAAAAAAGAGCTCCTAAAAAGTGTGTTTTCTTCCTGGTCTGCATCTGCTAGACTTAAAAGATTTAGCGTAGGAACGAGTTCAATTTTCAGTGGTCACTTATCACGGGATTTTTTGACATTCATATGTTATAGAGTTAGACTGGCAATAGTCAAGGTGATAAAAAAAAATAGTGATTTAATAGCTGCAAGCTTGCAAACAAGTCATTGGATCTCTCTTTCCAGAGACCAATTTTATTTATTTGTTGTGTTTTGAAAAAGGTCTTGCTTAGAGTTATTTGTTTTCAGTGTCCTAAATTAAGTAGAGAGGTCTCTGTATCCCAAAGATGATGCTTTTTCATTATGAATTTACATAATAAAATTGAAGTGAAAATACAGAAACAGAAAAGCTTCTTTAAGTTGTTATGCAGCTGATAATTGATAAATATCTTCAACATCTAAGTTTGAATGTACCTTATCTTATGCAGAGAACAAGATGTATATGGAACTATTGCTTTCTTCTATGCAAAGCACTGAAGCCTGAAATGAGCACCTGCTTATCACCACAAAGATTAGCATCATCTTGACCAGCAATTTATAAAAATAGAATAGCAAATCCAAGTTTTGTTTTGTGCATATCATGTCAAGATCTTCCTTTCCATGCAACTATTTTGTATACATAATTTGATTGATATTCTGAAAACCATTGGAATGGATTTCCCCCCCTTTTGGTATATACTATAATGTACAGTATCCATATTCTAAGTCCTAAC

mRNA sequence

GAACTTGAAAACGAATGAGAAAATAAGAGGGAAAATCACAAATCATTTGAGGGTGAAGCAATCCGCCGATTTCACCATCTCTTTTGATTTCTCCGATTCCGAAAGATTTCAGGAATATCGAAATTTCTTTTGATTTTAGATTTCCCCCTTTTTTTTCTCTCAAAATTCTCCATTTTGTATCGTTTATAAATGAACTCAAAATTCTCCATAAGATTTTGATTGAGTCGAGTCCCAAAATTGTAAGCAAGTTTTGTTTAGATGCTTTCTGGGTTTATGAGAATTTTCGTTTTTTGTTTCTTCTTGAAATTGATCGGTTTTGAATTTTAGCGATTTCTTGTTGTTGACAAAATCGTGGGTTGGAACTGCGTTTTAGTAATTGTAGAAGAAATTTCAGGGAGCTCCATTTTGATCTTTTTGAGATAAAATTTTCTCATTTTCTGTATGGAGATTACTGCATCATACAGGTGCCATCTCCCACTCCTTCCCATTTTGAGATTTTAATCGGAATCGGAGTTTCGCCCCACTACATACCCGAGAGCACCCGCGCCATGGCGGTGTCTTTCAGCCGGTTTTCGTCGTGGTTTTGGAATGGGAAGGGGAAAGAAAAGCCTGTTCCAAATGGGGTTTCTTCAAATTCTTCAACTGAGTTTGGTAATGGATTGAGAGAAGCGGAGAGTGTAGAATTGAACAAGGGGGTGGATTTGGGTTCATCAAGGAAGAAGGATAAGAACCAGAATTTGAAAAGTAAGAAGGAAACAACAAGGATTGTTGATTGGGAATGTGATTTTGTGATGGTGCAAGGTGATGACATTGCTGATGAGGCTGATTGGTCCATTGGCTGGTTGGAGCCTCAGGGTCCTGGCTTTAAGAATGAGGATAGTTTTGCAGTTTTGGTTCCTTCTTATAGCAATCGTTGCAAGGAAATTGTGGAGGGTTCAAACGTGGAGCTTTTGGCTGCAATTCAAAACCTTCAAAATGAATTCTCACCTGAGAACAAGATGTATATGGAACTATTGCTTTCTTCTATGCAAAGCACTGAAGCCTGAAATGAGCACCTGCTTATCACCACAAAGATTAGCATCATCTTGACCAGCAATTTATAAAAATAGAATAGCAAATCCAAGTTTTGTTTTGTGCATATCATGTCAAGATCTTCCTTTCCATGCAACTATTTTGTATACATAATTTGATTGATATTCTGAAAACCATTGGAATGGATTTCCCCCCCTTTTGGTATATACTATAATGTACAGTATCCATATTCTAAGTCCTAAC

Coding sequence (CDS)

ATGGCGGTGTCTTTCAGCCGGTTTTCGTCGTGGTTTTGGAATGGGAAGGGGAAAGAAAAGCCTGTTCCAAATGGGGTTTCTTCAAATTCTTCAACTGAGTTTGGTAATGGATTGAGAGAAGCGGAGAGTGTAGAATTGAACAAGGGGGTGGATTTGGGTTCATCAAGGAAGAAGGATAAGAACCAGAATTTGAAAAGTAAGAAGGAAACAACAAGGATTGTTGATTGGGAATGTGATTTTGTGATGGTGCAAGGTGATGACATTGCTGATGAGGCTGATTGGTCCATTGGCTGGTTGGAGCCTCAGGGTCCTGGCTTTAAGAATGAGGATAGTTTTGCAGTTTTGGTTCCTTCTTATAGCAATCGTTGCAAGGAAATTGTGGAGGGTTCAAACGTGGAGCTTTTGGCTGCAATTCAAAACCTTCAAAATGAATTCTCACCTGAGAACAAGATGTATATGGAACTATTGCTTTCTTCTATGCAAAGCACTGAAGCCTGA

Protein sequence

MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDKNQNLKSKKETTRIVDWECDFVMVQGDDIADEADWSIGWLEPQGPGFKNEDSFAVLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSSMQSTEA

Homology

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BLAST of Sed0014417 vs. NCBI nr
Match: XP_023544309.1 (uncharacterized protein LOC111803923 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.9 bits (559), Expect = 1.6e-53
Identity = 122/166 (73.49%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVSFSRFS WFW GK KE  V NG  SNSS+E G GLRE ES++L K VDLGSS KK K
Sbjct: 1   MAVSFSRFSLWFWKGKEKES-VANGAPSNSSSEVGTGLREPESLKL-KRVDLGSSSKKVK 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GDDI-----ADEADWSIGWLEPQGPGFKNEDSFA 120
           NQ  +SKKETTRI DWE DF++V   GDD+     ADEADWSIGWLEP GPGF+++DSFA
Sbjct: 61  NQKWRSKKETTRI-DWEYDFLIVPPGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFA 120

Query: 121 VLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSS 160
           VLVPSYSNRCKE+VEGSNVELLAAI+NLQ+EFSPE+K YMEL LSS
Sbjct: 121 VLVPSYSNRCKEVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSS 163

[Close]

BLAST of Sed0014417 vs. NCBI nr
Match: XP_022978826.1 (uncharacterized protein LOC111478669 isoform X1 [Cucurbita maxima])

HSP 1 Score: 219.2 bits (557), Expect = 2.7e-53
Identity = 122/166 (73.49%), Postives = 135/166 (81.33%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVSFSRFS WFW GK KE  V NG  SNSSTE G GLRE ES++L K VDLGS  KK K
Sbjct: 1   MAVSFSRFSLWFWKGKEKES-VANGAPSNSSTEVGTGLREPESLKL-KRVDLGSFSKKVK 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GDDI-----ADEADWSIGWLEPQGPGFKNEDSFA 120
           NQ  +SKKETTRI DWE DF++V   GDD+     ADEADWSIGWLEP GPGF+++DSFA
Sbjct: 61  NQKWRSKKETTRI-DWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFA 120

Query: 121 VLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSS 160
           VLVPSYSNRCKE+VEGSNVELLAAI+NLQ+EFSPE+K YMEL LSS
Sbjct: 121 VLVPSYSNRCKEVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSS 163

[Close]

BLAST of Sed0014417 vs. NCBI nr
Match: KAG6604065.1 (hypothetical protein SDJN03_04674, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.8 bits (556), Expect = 3.5e-53
Identity = 121/166 (72.89%), Postives = 135/166 (81.33%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVSFSRFS WFW GK KE  V NG  SNS +E G GLRE ES++L K VDLGSS KK K
Sbjct: 1   MAVSFSRFSLWFWKGKEKES-VTNGAPSNSPSEVGTGLREPESLKL-KRVDLGSSSKKVK 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GDDI-----ADEADWSIGWLEPQGPGFKNEDSFA 120
           NQ  +SKKETTRI DWE DF++V   GDD+     ADEADWSIGWLEP GPGF+++DSFA
Sbjct: 61  NQKWRSKKETTRI-DWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFA 120

Query: 121 VLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSS 160
           VLVPSYSNRC+E+VEGSNVELLAAI+NLQ+EFSPENK YMEL LSS
Sbjct: 121 VLVPSYSNRCREVVEGSNVELLAAIKNLQHEFSPENKKYMELWLSS 163

[Close]

BLAST of Sed0014417 vs. NCBI nr
Match: XP_022950521.1 (uncharacterized protein LOC111453604 [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 3.0e-52
Identity = 120/166 (72.29%), Postives = 135/166 (81.33%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVSFSRFS WFW GK KE  V NG  SNS +E G GLRE ES++L K VDLGSS KK K
Sbjct: 1   MAVSFSRFSLWFWKGKEKES-VANGGPSNSPSEVGTGLREPESLKL-KRVDLGSSSKKVK 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GDDI-----ADEADWSIGWLEPQGPGFKNEDSFA 120
           NQ  +SKKETTRI DWE DF++V   GDD+     ADEADWSIGWLEP GPGF+++DSFA
Sbjct: 61  NQKWRSKKETTRI-DWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFA 120

Query: 121 VLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSS 160
           VLVPSYSNRC+E+VEGSNVELLAAI+NLQ+EFSPE+K YMEL LSS
Sbjct: 121 VLVPSYSNRCREVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSS 163

[Close]

BLAST of Sed0014417 vs. NCBI nr
Match: XP_038882086.1 (uncharacterized protein LOC120073358 [Benincasa hispida])

HSP 1 Score: 209.1 bits (531), Expect = 2.8e-50
Identity = 118/173 (68.21%), Postives = 133/173 (76.88%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVS SRFS WFWNGK KE  V NG   NSS+EFGNGLRE ES++  K VDL SS KK  
Sbjct: 1   MAVSLSRFSLWFWNGKEKE-TVANGSPPNSSSEFGNGLREPESLKF-KRVDLPSSSKKVN 60

Query: 61  NQNLKSKKETTRIVDWECDFVMV--QGD------DIADEADWSIGWLEPQGPGFKNEDSF 120
            Q  +SKKETT  ++WE DFVMV   GD      D  DEADWSIGWLEP GPGF+++DSF
Sbjct: 61  KQKWQSKKETT--IEWEYDFVMVPSSGDDDMQMADSGDEADWSIGWLEPHGPGFQSDDSF 120

Query: 121 AVLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSSMQSTEA 166
           AVLVPSYSNRCKE+VEGSNVELLAAI+ LQNEFSPE+K YMEL LS +Q++ A
Sbjct: 121 AVLVPSYSNRCKEVVEGSNVELLAAIKKLQNEFSPESKKYMELWLSLLQNSIA 169

[Close]

BLAST of Sed0014417 vs. ExPASy TrEMBL
Match: A0A6J1IP42 (uncharacterized protein LOC111478669 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478669 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 122/166 (73.49%), Postives = 135/166 (81.33%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVSFSRFS WFW GK KE  V NG  SNSSTE G GLRE ES++L K VDLGS  KK K
Sbjct: 1   MAVSFSRFSLWFWKGKEKES-VANGAPSNSSTEVGTGLREPESLKL-KRVDLGSFSKKVK 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GDDI-----ADEADWSIGWLEPQGPGFKNEDSFA 120
           NQ  +SKKETTRI DWE DF++V   GDD+     ADEADWSIGWLEP GPGF+++DSFA
Sbjct: 61  NQKWRSKKETTRI-DWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFA 120

Query: 121 VLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSS 160
           VLVPSYSNRCKE+VEGSNVELLAAI+NLQ+EFSPE+K YMEL LSS
Sbjct: 121 VLVPSYSNRCKEVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSS 163

[Close]

BLAST of Sed0014417 vs. ExPASy TrEMBL
Match: A0A6J1GF21 (uncharacterized protein LOC111453604 OS=Cucurbita moschata OX=3662 GN=LOC111453604 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52
Identity = 120/166 (72.29%), Postives = 135/166 (81.33%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVSFSRFS WFW GK KE  V NG  SNS +E G GLRE ES++L K VDLGSS KK K
Sbjct: 1   MAVSFSRFSLWFWKGKEKES-VANGGPSNSPSEVGTGLREPESLKL-KRVDLGSSSKKVK 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GDDI-----ADEADWSIGWLEPQGPGFKNEDSFA 120
           NQ  +SKKETTRI DWE DF++V   GDD+     ADEADWSIGWLEP GPGF+++DSFA
Sbjct: 61  NQKWRSKKETTRI-DWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFA 120

Query: 121 VLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSS 160
           VLVPSYSNRC+E+VEGSNVELLAAI+NLQ+EFSPE+K YMEL LSS
Sbjct: 121 VLVPSYSNRCREVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSS 163

[Close]

BLAST of Sed0014417 vs. ExPASy TrEMBL
Match: A0A1S3B0X6 (uncharacterized protein LOC103484930 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484930 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.4e-50
Identity = 117/172 (68.02%), Postives = 134/172 (77.91%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVS SRFS WFWNGK KE  V NG + NSS+EFG GLRE ES++  K VDL SS KK  
Sbjct: 1   MAVSLSRFSLWFWNGKEKE-TVANGSTPNSSSEFGTGLREPESLKF-KRVDLPSSSKKVN 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GDDI-----ADEADWSIGWLEPQGPGFKNEDSFA 120
            Q  +SKKET   ++WE DFVMV   GDD+      DEADWSIGWLEP GPGF+++DSFA
Sbjct: 61  KQKWQSKKETR--IEWEYDFVMVPSGGDDMQMSDSGDEADWSIGWLEPHGPGFQSDDSFA 120

Query: 121 VLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSSMQSTEA 166
           VLVPSYSNRCKE+VEGSNVELLAAI+ LQNEFSPE+K YMEL LSS+Q++ A
Sbjct: 121 VLVPSYSNRCKEVVEGSNVELLAAIKKLQNEFSPESKKYMELWLSSLQNSVA 168

[Close]

BLAST of Sed0014417 vs. ExPASy TrEMBL
Match: A0A6J1HGF0 (uncharacterized protein LOC111463276 OS=Cucurbita moschata OX=3662 GN=LOC111463276 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49
Identity = 113/174 (64.94%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVSFSRFS W WN K K K V NG  S+SS+EFGNGLRE+E ++  +GV L SS KK +
Sbjct: 1   MAVSFSRFSLWVWNRKEK-KSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVE 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GD-------DIADEADWSIGWLEPQGPGFKNEDS 120
            Q   SKKET   ++WECD+VMV   GD       D   EADWSIGWLEP GPGFK++DS
Sbjct: 61  KQQWGSKKETR--IEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDS 120

Query: 121 FAVLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSSMQSTEA 166
           FAVLVPSYSNRCKE+VE SNVELLAAI+NLQ EFSPE++ +MELLLSS+Q+++A
Sbjct: 121 FAVLVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPESQKHMELLLSSLQNSKA 171

[Close]

BLAST of Sed0014417 vs. ExPASy TrEMBL
Match: A0A6J1IUD7 (uncharacterized protein LOC111478669 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478669 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 113/154 (73.38%), Postives = 125/154 (81.17%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNGKGKEKPVPNGVSSNSSTEFGNGLREAESVELNKGVDLGSSRKKDK 60
           MAVSFSRFS WFW GK KE  V NG  SNSSTE G GLRE ES++L K VDLGS  KK K
Sbjct: 1   MAVSFSRFSLWFWKGKEKES-VANGAPSNSSTEVGTGLREPESLKL-KRVDLGSFSKKVK 60

Query: 61  NQNLKSKKETTRIVDWECDFVMVQ--GDDI-----ADEADWSIGWLEPQGPGFKNEDSFA 120
           NQ  +SKKETTRI DWE DF++V   GDD+     ADEADWSIGWLEP GPGF+++DSFA
Sbjct: 61  NQKWRSKKETTRI-DWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFA 120

Query: 121 VLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSP 148
           VLVPSYSNRCKE+VEGSNVELLAAI+NLQ+EFSP
Sbjct: 121 VLVPSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 151

[Close]

BLAST of Sed0014417 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-11
Identity = 45/123 (36.59%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 55  SRKKDKNQNLKSKKETTRI---VDWECDFVMVQGDD-----IADEADWSIGWLEPQGPGF 114
           SRK+ + + LK   +  R+    + E +     G +       D  +WS+GW EP GP F
Sbjct: 16  SRKEKETEALKFPTKIARVNKRKELELESFGSSGSESVDVVAGDGPEWSVGWTEPHGPDF 75

Query: 115 KNED-----SFAVLVPSYSNRCKEIVEGS---NVELLAAIQNLQNEFSPENKMYMELLLS 162
           +++D      F VLVP Y    + +VEGS   N +LL+A++NL N   P+ K YME  LS
Sbjct: 76  QSDDEGNDGGFLVLVPCY----RAVVEGSSNNNNQLLSAVKNLPNGLPPDGKNYMEQWLS 134

[Close]

BLAST of Sed0014417 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 4.1e-07
Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 0


Query: 55  SRKKDKNQNLKSKKETTRI---VDWECDFVMVQGDD-----IADEADWSIGWLEPQGPGF 114
           SRK+ + + LK   +  R+    + E +     G +       D  +WS+GW EP GP F
Sbjct: 16  SRKEKETEALKFPTKIARVNKRKELELESFGSSGSESVDVVAGDGPEWSVGWTEPHGPDF 75

Query: 115 KNED-----SFAVLVPSYSNRCKEIVEGS---NVELLAAIQNLQNEFSP 148
           +++D      F VLVP Y    + +VEGS   N +LL+A++NL N   P
Sbjct: 76  QSDDEGNDGGFLVLVPCY----RAVVEGSSNNNNQLLSAVKNLPNGLPP 120

[Close]

BLAST of Sed0014417 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06
Identity = 54/178 (30.34%), Postives = 78/178 (43.82%), Query Frame = 0


Query: 1   MAVSFSRFSSWFWNG-----KGKEKPVPNGVSSNS-----STEFGNGLREAESVELNKG- 60
           MAVSF R   W   G     + K++ +P G SS S     +T    G   +   +  +G 
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLSPSLKKTTTSKTGSSSSSVKKTKRGW 60

Query: 61  ---VDLGSSRKKDKNQNLKSKKETTRIVDWECDFVMVQGDDIADEADWSIGWLEPQGPGF 120
                 GS  ++DK  N+   +                     D+ +WSIGW+EP GPGF
Sbjct: 61  IGRGGSGSGGEEDKIGNVVFPE--------------------PDDPEWSIGWVEPHGPGF 120

Query: 121 KNED----SFAVLVPSYSNRCKEIVEGSNVELLAAIQNLQNEFSPENKMYMELLLSSM 161
           K ED     F VLVP Y    K++++GS  ++        +  +P+ K  ME  LSSM
Sbjct: 121 KAEDDDCGGFVVLVPLY----KKVMDGSGNQI---PNGFFSPAAPDGK-NMEQWLSSM 150

The following BLAST results are available for this feature:

BLAST of Sed0014417 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544309.1	1.6e-53	73.49	uncharacterized protein LOC111803923 [Cucurbita pepo subsp. pepo]	[more]
XP_022978826.1	2.7e-53	73.49	uncharacterized protein LOC111478669 isoform X1 [Cucurbita maxima]	[more]
KAG6604065.1	3.5e-53	72.89	hypothetical protein SDJN03_04674, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950521.1	3.0e-52	72.29	uncharacterized protein LOC111453604 [Cucurbita moschata]	[more]
XP_038882086.1	2.8e-50	68.21	uncharacterized protein LOC120073358 [Benincasa hispida]	[more]

BLAST of Sed0014417 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0014417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IP42	1.3e-53	73.49	uncharacterized protein LOC111478669 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GF21	1.5e-52	72.29	uncharacterized protein LOC111453604 OS=Cucurbita moschata OX=3662 GN=LOC1114536...	[more]
A0A1S3B0X6	1.4e-50	68.02	uncharacterized protein LOC103484930 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HGF0	2.0e-49	64.94	uncharacterized protein LOC111463276 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A6J1IUD7	2.6e-49	73.38	uncharacterized protein LOC111478669 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Sed0014417 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38060.2	8.0e-11	36.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G38060.1	4.1e-07	33.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G65480.1	1.6e-06	30.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..68
None	No IPR available	PANTHER	PTHR34464:SF8	BNAC03G61080D PROTEIN	coord: 1..162
None	No IPR available	PANTHER	PTHR34464	OS09G0376300 PROTEIN	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014417.1	Sed0014417.1	mRNA