Homology
BLAST of Sed0014272 vs. NCBI nr
Match:
XP_038899569.1 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa hispida] >XP_038899570.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa hispida] >XP_038899571.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa hispida] >XP_038899572.1 pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa hispida])
HSP 1 Score: 1082.0 bits (2797), Expect = 0.0e+00
Identity = 521/631 (82.57%), Postives = 572/631 (90.65%), Query Frame = 0
Query: 1 MILVFVPKPCGLLFSRCYSTLFGSDVCPSHCLLHLLQHAVNCQSQKLILQSHAQVITHGL 60
M LVFVPKPCGLL SRCYSTLF D+CPSHCLLHLLQHA+N QSQK I QSHAQVITHGL
Sbjct: 6 MNLVFVPKPCGLLISRCYSTLFRVDLCPSHCLLHLLQHAINHQSQKRIRQSHAQVITHGL 65
Query: 61 EQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVFHGAFDRFNE 120
E NTFLITKLISAYSI G L+E IF+LVSI+TVYIWNSLI+GYVKN VFHGAFDRFNE
Sbjct: 66 EHNTFLITKLISAYSICGDLQELNLIFDLVSIKTVYIWNSLISGYVKNGVFHGAFDRFNE 125
Query: 121 MQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSLLSMYFKYGE 180
MQQCNIMPDDFTLS LAKAS+E+GNV VGK IHGKS+RLGF+ DI+VANSL+SMYFKYGE
Sbjct: 126 MQQCNIMPDDFTLSILAKASNELGNVVVGKLIHGKSLRLGFISDIIVANSLISMYFKYGE 185
Query: 181 CKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQMDGIKPNAITISSL 240
CKESLKLFD+MP RNSG+WN LLAGYA+ +DCF+ KEAW V R+MQ+DGIKP+A TISSL
Sbjct: 186 CKESLKLFDEMPVRNSGTWNVLLAGYASFSDCFYVKEAWEVVRNMQIDGIKPDAFTISSL 245
Query: 241 LPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVIASRYVFNQI 300
LPLCG GK SYGKELHCYIVKNELDLD GS H+GCGLIDMY+R+ N+IASRYVF+QI
Sbjct: 246 LPLCGNTNGKLSYGKELHCYIVKNELDLDSGSKFHIGCGLIDMYSRENNIIASRYVFDQI 305
Query: 301 KSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPACNSLAGLMNG 360
KSRNIYVWTAMV GY QNED D A ILF+EMQ+KDGIVPNRISLISLLPAC+S AGL+NG
Sbjct: 306 KSRNIYVWTAMVSGYAQNEDSDKALILFREMQIKDGIVPNRISLISLLPACSSHAGLING 365
Query: 361 KQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYGL 420
KQIHG+A+RKEF+DDASLCNALIDMYSKCGSLEN RKVFE++SFCKDTISWT LISAYGL
Sbjct: 366 KQIHGYAVRKEFHDDASLCNALIDMYSKCGSLENARKVFESESFCKDTISWTALISAYGL 425
Query: 421 HGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTVE 480
HGQGE +IRLYNDM++LG K D ITVV VLSACGRS LVNEGLQ+Y TAVQ+Y I+PT E
Sbjct: 426 HGQGEESIRLYNDMVELGIKLDQITVVAVLSACGRSSLVNEGLQLYHTAVQEYKIEPTAE 485
Query: 481 ICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVEL 540
ICA VVDMLG+IGELEQALSFIKTM VEPGP VWGALVSASIRY+NYEMLELAYRFL+EL
Sbjct: 486 ICAAVVDMLGNIGELEQALSFIKTMTVEPGPGVWGALVSASIRYRNYEMLELAYRFLIEL 545
Query: 541 EPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADKA 600
EPENPSNFISLSNLYA+A+RWDVVAELRNTMKE+GLRKAPGCSWIN +++THCFHVADK
Sbjct: 546 EPENPSNFISLSNLYASASRWDVVAELRNTMKERGLRKAPGCSWINISTKTHCFHVADKT 605
Query: 601 HPSSKFIYEVLDHVFIIMKEHHCFDDLEYLI 632
HPSS IYEVLDH+FIIMKE HC DD+EYLI
Sbjct: 606 HPSSNLIYEVLDHIFIIMKEPHCSDDIEYLI 636
BLAST of Sed0014272 vs. NCBI nr
Match:
XP_023004361.1 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1067.4 bits (2759), Expect = 4.8e-308
Identity = 522/632 (82.59%), Postives = 569/632 (90.03%), Query Frame = 0
Query: 1 MILVFVPKPCGLLFSRCYSTLFGSDVCPSHCLLHLLQHAVNCQSQKLILQSHAQVITHGL 60
M LVFVPKPCGL S CYSTLFG D+ PS LLH+LQHAVN QSQK I +SHAQVITHGL
Sbjct: 1 MNLVFVPKPCGLFISHCYSTLFGRDLYPSQRLLHILQHAVNQQSQKFIRESHAQVITHGL 60
Query: 61 EQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVFHGAFDRFNE 120
EQN FLITKLISAYS G L EST IF+LVS RTV IWNSLINGYVKNCVFHGAF RFNE
Sbjct: 61 EQNNFLITKLISAYSTCGDLNESTLIFDLVSTRTVCIWNSLINGYVKNCVFHGAFHRFNE 120
Query: 121 MQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSLLSMYFKYGE 180
MQQC+I+PDDFTLSTLAKASSE+ NV VGKSIHGK +RLGF+ DIVVANSL+SMYFKYGE
Sbjct: 121 MQQCDIVPDDFTLSTLAKASSELRNVTVGKSIHGKIVRLGFIFDIVVANSLISMYFKYGE 180
Query: 181 CKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAW-TVFRSMQMDGIKPNAITISS 240
CKESLKLFD+MPERNSGSWN LLAGYA+SNDCF+ KEAW V RSMQ+DG+KP+A TISS
Sbjct: 181 CKESLKLFDEMPERNSGSWNVLLAGYASSNDCFYVKEAWDIVVRSMQIDGVKPDAFTISS 240
Query: 241 LLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVIASRYVFNQ 300
LLPLCG PIGK +YGKELHCYIVKNELDLDFGSNVHLGCGLIDMY+RD + ASR+VF+Q
Sbjct: 241 LLPLCGNPIGKLNYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYSRDNKITASRHVFDQ 300
Query: 301 IKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPACNSLAGLMN 360
IK RNIYVWTAMVRGYVQN+DPD A ILFQEMQM+DGI+PNRISLISLLPACNSLAGLMN
Sbjct: 301 IKRRNIYVWTAMVRGYVQNKDPDKALILFQEMQMRDGILPNRISLISLLPACNSLAGLMN 360
Query: 361 GKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYG 420
GKQIHGFAIRK FNDDASLCNALIDMYSKCGSLE RKVFE+DSF KDTISWTTLISAYG
Sbjct: 361 GKQIHGFAIRKGFNDDASLCNALIDMYSKCGSLEKARKVFESDSFHKDTISWTTLISAYG 420
Query: 421 LHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTV 480
LHGQG+ +IRLYNDMIKLG KPD I VVGVLSAC RSGL+ EGLQ+Y TAVQDY ++PT
Sbjct: 421 LHGQGKESIRLYNDMIKLGIKPDQIAVVGVLSACSRSGLIKEGLQLYSTAVQDYRVEPTA 480
Query: 481 EICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVE 540
EICAV+VDMLG++GELEQAL+FIKTM +EPGPSVWGALVSASIRYK+Y+MLELAYR L+E
Sbjct: 481 EICAVIVDMLGNMGELEQALNFIKTMPLEPGPSVWGALVSASIRYKDYKMLELAYRSLIE 540
Query: 541 LEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADK 600
LEPENPSNFISLSNLYA+A+RWD+VAELR+TMKE+GLRK+PGCSWIN N++THCFHVADK
Sbjct: 541 LEPENPSNFISLSNLYASASRWDLVAELRHTMKERGLRKSPGCSWININTKTHCFHVADK 600
Query: 601 AHPSSKFIYEVLDHVFIIMKEHHCFDDLEYLI 632
AHPSSK IYEVLDHVF M E DDLEY I
Sbjct: 601 AHPSSKLIYEVLDHVFSTMNE-PISDDLEYWI 631
BLAST of Sed0014272 vs. NCBI nr
Match:
XP_023513452.1 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1062.0 bits (2745), Expect = 2.0e-306
Identity = 518/632 (81.96%), Postives = 567/632 (89.72%), Query Frame = 0
Query: 1 MILVFVPKPCGLLFSRCYSTLFGSDVCPSHCLLHLLQHAVNCQSQKLILQSHAQVITHGL 60
M LVFVPKPCGL S CYSTLFG D+ P LLH+LQHA+N QSQK I +SHAQVITHGL
Sbjct: 1 MNLVFVPKPCGLFISHCYSTLFGRDLYPPQRLLHILQHAINQQSQKFIRESHAQVITHGL 60
Query: 61 EQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVFHGAFDRFNE 120
EQN FLITKLISAYS G L EST IF+LVS RTV IWNSLINGYVKNCVFHGAF RFNE
Sbjct: 61 EQNNFLITKLISAYSTCGDLNESTLIFDLVSTRTVCIWNSLINGYVKNCVFHGAFHRFNE 120
Query: 121 MQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSLLSMYFKYGE 180
MQQC+I+PDDFTLSTLAKASSE+ NV +GKSIHGK +RLGF+ DIVVANSL+SMYFKYGE
Sbjct: 121 MQQCDIVPDDFTLSTLAKASSELRNVTIGKSIHGKIVRLGFIFDIVVANSLISMYFKYGE 180
Query: 181 CKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAW-TVFRSMQMDGIKPNAITISS 240
CKESLKLFD+MPERNSGSWN LLAGYA+SNDCF+ KEAW V RSMQ+DG+KP+A TISS
Sbjct: 181 CKESLKLFDEMPERNSGSWNVLLAGYASSNDCFYVKEAWDIVVRSMQIDGVKPDAFTISS 240
Query: 241 LLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVIASRYVFNQ 300
LLPLCG PIGK +YGKELHCYIVKNELDLDFGSNVHLGCGLIDMY+RD + ASR+VF+Q
Sbjct: 241 LLPLCGNPIGKLNYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYSRDNKITASRHVFDQ 300
Query: 301 IKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPACNSLAGLMN 360
IK RNIYVWTAMVRGYVQN+DPD A ILFQEMQM+DGI+PNRISLISLLPACNSLAGLMN
Sbjct: 301 IKRRNIYVWTAMVRGYVQNKDPDKALILFQEMQMRDGILPNRISLISLLPACNSLAGLMN 360
Query: 361 GKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYG 420
GKQIHGFAIRK FNDDASLCNALIDMYSKCGSLE RKVFE+DSF KDTISWTTLISAYG
Sbjct: 361 GKQIHGFAIRKGFNDDASLCNALIDMYSKCGSLEKARKVFESDSFHKDTISWTTLISAYG 420
Query: 421 LHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTV 480
LHGQG+ +IRLYNDMIKLG KPD I VVGVLSAC RSGL+ EGLQ+Y TAVQDY ++PT
Sbjct: 421 LHGQGKESIRLYNDMIKLGIKPDQIAVVGVLSACSRSGLIKEGLQLYSTAVQDYRVEPTA 480
Query: 481 EICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVE 540
EICAV+VDMLG++GELEQAL+FIK M VEPGPSVWGALVSASIRYK+Y++LELAYR L+E
Sbjct: 481 EICAVIVDMLGNMGELEQALNFIKMMPVEPGPSVWGALVSASIRYKDYKILELAYRSLIE 540
Query: 541 LEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADK 600
LEPENPSNFISLSNLYA+A+RWD+VAELR+TMKE+GLRK+PGCSWIN N++THCFHVADK
Sbjct: 541 LEPENPSNFISLSNLYASASRWDLVAELRHTMKERGLRKSPGCSWININTKTHCFHVADK 600
Query: 601 AHPSSKFIYEVLDHVFIIMKEHHCFDDLEYLI 632
AHPSSK IYEVLDHVF M E DDLEY I
Sbjct: 601 AHPSSKLIYEVLDHVFSTMNE-PISDDLEYWI 631
BLAST of Sed0014272 vs. NCBI nr
Match:
KAG7025484.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1047.7 bits (2708), Expect = 3.9e-302
Identity = 508/623 (81.54%), Postives = 561/623 (90.05%), Query Frame = 0
Query: 8 KPCGLLFSRCYSTLFGSDVCPSHCLLHLLQHAVNCQSQKLILQSHAQVITHGLEQNTFLI 67
+PCGL S CYSTLFG D+ P LLH+LQHA+N QSQK I +SHAQVITHGLEQN FLI
Sbjct: 36 QPCGLFISHCYSTLFGRDLYPPQRLLHILQHAINQQSQKFIRESHAQVITHGLEQNNFLI 95
Query: 68 TKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVFHGAFDRFNEMQQCNIM 127
TKLISAYS G L EST IF+LVS RTV IWNSLINGYVKNCVFHGAF RFNEMQQC+I+
Sbjct: 96 TKLISAYSTCGDLNESTLIFDLVSTRTVCIWNSLINGYVKNCVFHGAFHRFNEMQQCDIV 155
Query: 128 PDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSLLSMYFKYGECKESLKL 187
PDDFTLSTLAKASSE+ NV VG+SIHGK +RLGF+ DIVVANSL+SMYFKYGECKESLKL
Sbjct: 156 PDDFTLSTLAKASSELRNVTVGQSIHGKIVRLGFIFDIVVANSLISMYFKYGECKESLKL 215
Query: 188 FDKMPERNSGSWNALLAGYANSNDCFFAKEAW-TVFRSMQMDGIKPNAITISSLLPLCGI 247
FD+MPERNSGSWN LLAGYA+SNDCF+ KEAW V RSMQ+DG+KP+A TISSLLPLCG
Sbjct: 216 FDEMPERNSGSWNVLLAGYASSNDCFYVKEAWDIVVRSMQIDGVKPDAFTISSLLPLCGN 275
Query: 248 PIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVIASRYVFNQIKSRNIY 307
PIG+ +YGKELHCYIVKNELDLDFGSNVHLGCGLIDMY+RD + ASR+VF+QIK RNIY
Sbjct: 276 PIGELNYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYSRDNKITASRHVFDQIKRRNIY 335
Query: 308 VWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPACNSLAGLMNGKQIHGF 367
VWTAMVRGYVQNEDPD A ILFQEMQM+DGI+PNRISLISLLPACNSLAGLMNGKQIHGF
Sbjct: 336 VWTAMVRGYVQNEDPDKALILFQEMQMRDGILPNRISLISLLPACNSLAGLMNGKQIHGF 395
Query: 368 AIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYGLHGQGEV 427
AIRK FNDDASLCNALIDMYSKCGSLE RKVFE+DSF KDTISWTTLISAYGLHGQG+
Sbjct: 396 AIRKGFNDDASLCNALIDMYSKCGSLEKARKVFESDSFRKDTISWTTLISAYGLHGQGKE 455
Query: 428 AIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTVEICAVVV 487
+IRLYNDMIKLG KPD I VVGVLSAC RSGL+ EGLQ+Y TAVQDY ++PT EICAV+V
Sbjct: 456 SIRLYNDMIKLGIKPDQIAVVGVLSACSRSGLIKEGLQLYSTAVQDYRVEPTAEICAVIV 515
Query: 488 DMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVELEPENPS 547
DMLG++GELEQAL+FIKTM VEPGPSVWGALVSASIRYK+Y+MLELAYR L+EL+PENPS
Sbjct: 516 DMLGNMGELEQALNFIKTMPVEPGPSVWGALVSASIRYKDYKMLELAYRSLIELDPENPS 575
Query: 548 NFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADKAHPSSKF 607
NFISLSNLYA+A+RWD+VAELR+TMKE+GLRK+PGCSWIN N++THCFHVADK+HPSSK
Sbjct: 576 NFISLSNLYASASRWDLVAELRHTMKERGLRKSPGCSWININTKTHCFHVADKSHPSSKL 635
Query: 608 IYEVLDHVFIIMKEHHCFDDLEY 630
IYEVLDHVF M E DDL++
Sbjct: 636 IYEVLDHVFGTMNE-PISDDLDF 657
BLAST of Sed0014272 vs. NCBI nr
Match:
XP_022143534.1 (pentatricopeptide repeat-containing protein At3g12770-like [Momordica charantia])
HSP 1 Score: 1039.6 bits (2687), Expect = 1.1e-299
Identity = 504/599 (84.14%), Postives = 548/599 (91.49%), Query Frame = 0
Query: 32 LLHLLQHAVNCQSQKLILQSHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVS 91
LLH LQHA+N QSQKL QSHAQVIT GLEQN+FLITKLISAYSI G LKEST IF+LVS
Sbjct: 68 LLHFLQHAINHQSQKLTCQSHAQVITRGLEQNSFLITKLISAYSICGNLKESTLIFDLVS 127
Query: 92 IRTVYIWNSLINGYVKNCVFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKS 151
T+Y WNSLIN +VKN VFHGAFDRF EMQQC+I+PD FTLSTLAKAS+EIGNVAVGK
Sbjct: 128 TITIYTWNSLINAFVKNYVFHGAFDRFKEMQQCDIIPDHFTLSTLAKASTEIGNVAVGKL 187
Query: 152 IHGKSIRLGFMVDIVVANSLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSND 211
IHGKSIRLGFM+DIVVANSL+SMYFKYGEC+ SLKLFD+MPERNS SWN LLAGYA+S+D
Sbjct: 188 IHGKSIRLGFMLDIVVANSLVSMYFKYGECEASLKLFDEMPERNSASWNVLLAGYASSSD 247
Query: 212 CFFAKEAWTVFRSMQMDGIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDFG 271
CF+ KE W V RSMQ DGIKP+A TISS LPLCG PIGK SYGKELHCY+VKNELDLDFG
Sbjct: 248 CFYVKEVWEVVRSMQTDGIKPDAFTISSTLPLCGDPIGKLSYGKELHCYMVKNELDLDFG 307
Query: 272 SNVHLGCGLIDMYTRDKNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEM 331
SNVHLGC LIDMY+RD VIASRYVF+QIKS+NIYVWTAMVRGYVQNEDPD A ILFQEM
Sbjct: 308 SNVHLGCCLIDMYSRDNKVIASRYVFDQIKSKNIYVWTAMVRGYVQNEDPDKALILFQEM 367
Query: 332 QMKDGIVPNRISLISLLPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGS 391
QMKDGIVPNRISLISLLPAC+S AGLMNGKQIHGFAIRKEFNDD SLCNALIDMYSKCGS
Sbjct: 368 QMKDGIVPNRISLISLLPACSSHAGLMNGKQIHGFAIRKEFNDDVSLCNALIDMYSKCGS 427
Query: 392 LENGRKVFETDSFCKDTISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLS 451
LEN R+VFE+DSFCKD ISWTTLISA+GLHG+G+ AIRLYNDM++LG KPDPIT+VGVLS
Sbjct: 428 LENARRVFESDSFCKDAISWTTLISAFGLHGRGKEAIRLYNDMVELGIKPDPITIVGVLS 487
Query: 452 ACGRSGLVNEGLQIYRTAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGP 511
ACGRSGLVNEGLQIY T VQ++GIKPT EICAVVVD+LGSIGELEQALSFIKTM VEPGP
Sbjct: 488 ACGRSGLVNEGLQIYSTVVQEFGIKPTAEICAVVVDLLGSIGELEQALSFIKTMLVEPGP 547
Query: 512 SVWGALVSASIRYKNYEMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTM 571
VWGALVSAS++Y+NYEMLELAYR LVELEPEN SNFISLSNLYA+A+RWDVVAELRNTM
Sbjct: 548 GVWGALVSASVKYRNYEMLELAYRSLVELEPENASNFISLSNLYASASRWDVVAELRNTM 607
Query: 572 KEKGLRKAPGCSWINFNSETHCFHVADKAHPSSKFIYEVLDHVFIIMKEHHCFDDLEYL 631
KE+GLRKA GCSWI+ N++THCFHVADKAHPSSK IY+VLDHVFIIMKE HC+DDL Y+
Sbjct: 608 KERGLRKAAGCSWIDINTKTHCFHVADKAHPSSKLIYQVLDHVFIIMKEPHCYDDLGYV 666
BLAST of Sed0014272 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 374.4 bits (960), Expect = 2.5e-102
Identity = 203/573 (35.43%), Postives = 326/573 (56.89%), Query Frame = 0
Query: 50 QSHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNC 109
Q HA+++ GL+ + FLITKLI A S FG + + ++F+ + ++ WN++I GY +N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 110 VFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVAN 169
F A ++ MQ + PD FT L KA S + ++ +G+ +H + RLGF D+ V N
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 170 SLLSMYFKYGECKESLKLFD--KMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQM 229
L+++Y K + +F+ +PER SW A+++ YA + + EA +F M+
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE---PMEALEIFSQMRK 218
Query: 230 DGIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRD 289
+KP+ + + S+L + G+ +H +VK L+++ L L MY +
Sbjct: 219 MDVKPDWVALVSVLNAFTC-LQDLKQGRSIHASVVKMGLEIE----PDLLISLNTMYAKC 278
Query: 290 KNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISL 349
V ++ +F+++KS N+ +W AM+ GY +N A +F EM KD + P+ IS+ S
Sbjct: 279 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSA 338
Query: 350 LPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKD 409
+ AC + L + ++ + R ++ DD + +ALIDM++KCGS+E R VF+ + +D
Sbjct: 339 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR-TLDRD 398
Query: 410 TISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYR 469
+ W+ +I YGLHG+ AI LY M + G P+ +T +G+L AC SG+V EG +
Sbjct: 399 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF- 458
Query: 470 TAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNY 529
+ D+ I P + A V+D+LG G L+QA IK M V+PG +VWGAL+SA ++++
Sbjct: 459 NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV 518
Query: 530 EMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINF 589
E+ E A + L ++P N +++ LSNLYAAA WD VAE+R MKEKGL K GCSW+
Sbjct: 519 ELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 578
Query: 590 NSETHCFHVADKAHPSSKFIYEVLDHVFIIMKE 621
F V DK+HP + I ++ + +KE
Sbjct: 579 RGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
BLAST of Sed0014272 vs. ExPASy Swiss-Prot
Match:
Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)
HSP 1 Score: 358.6 bits (919), Expect = 1.4e-97
Identity = 196/569 (34.45%), Postives = 314/569 (55.18%), Query Frame = 0
Query: 52 HAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVF 111
H V+ +G E + ++ LI+ Y G +K + +F+ + R + WN++I+GY +N +
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 112 HGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSL 171
H + F M+ ++ PD TL+++ A +G+ +G+ IH I GF VDI V NSL
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 172 LSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQMDGIK 231
MY G +E+ KLF +M ++ SW +++GY + F +A +R M D +K
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN---FLPDKAIDTYRMMDQDSVK 398
Query: 232 PNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVI 291
P+ IT++++L C +G G ELH +K L S V + LI+MY++ K +
Sbjct: 399 PDEITVAAVLSACA-TLGDLDTGVELHKLAIKARLI----SYVIVANNLINMYSKCKCID 458
Query: 292 ASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPAC 351
+ +F+ I +N+ WT+++ G N A I ++M+M + PN I+L + L AC
Sbjct: 459 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAAC 518
Query: 352 NSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISW 411
+ LM GK+IH +R D L NAL+DMY +CG + F + KD SW
Sbjct: 519 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK--KDVTSW 578
Query: 412 TTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQ 471
L++ Y GQG + + L++ M+K +PD IT + +L C +S +V +GL +Y + ++
Sbjct: 579 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL-MYFSKME 638
Query: 472 DYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLE 531
DYG+ P ++ A VVD+LG GEL++A FI+ M V P P+VWGAL++A + ++ E
Sbjct: 639 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 698
Query: 532 LAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSET 591
L+ + + EL+ ++ +I L NLYA +W VA++R MKE GL GCSW+ +
Sbjct: 699 LSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKV 758
Query: 592 HCFHVADKAHPSSKFIYEVLDHVFIIMKE 621
H F DK HP +K I VL+ + M E
Sbjct: 759 HAFLSDDKYHPQTKEINTVLEGFYEKMSE 774
BLAST of Sed0014272 vs. ExPASy Swiss-Prot
Match:
Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)
HSP 1 Score: 355.9 bits (912), Expect = 9.3e-97
Identity = 209/605 (34.55%), Postives = 323/605 (53.39%), Query Frame = 0
Query: 51 SHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCV 110
+HA + G N F+ L++ YS +L ++ ++F+ +S+ V WNS+I Y K
Sbjct: 149 AHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK 208
Query: 111 FHGAFDRFNEM-QQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVAN 170
A + F+ M + PD+ TL + + +G ++GK +H ++ + ++ V N
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 171 SLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSNDC-----FFAK-------- 230
L+ MY K G E+ +F M ++ SWNA++AGY+ F K
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 231 -------------------EAWTVFRSMQMDGIKPNAITISSLLPLCGIPIGKWSYGKEL 290
EA V R M GIKPN +T+ S+L C +G +GKE+
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA-SVGALMHGKEI 388
Query: 291 HCYIVKNELDL---DFGSNVHLGCGLIDMYTRDKNVIASRYVFNQI--KSRNIYVWTAMV 350
HCY +K +DL G + LIDMY + K V +R +F+ + K R++ WT M+
Sbjct: 389 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 448
Query: 351 RGYVQNEDPDMAFILFQEMQMKD-GIVPNRISLISLLPACNSLAGLMNGKQIHGFAIRKE 410
GY Q+ D + A L EM +D PN ++ L AC SLA L GKQIH +A+R +
Sbjct: 449 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 508
Query: 411 FND-DASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYGLHGQGEVAIRL 470
N + N LIDMY+KCGS+ + R VF+ + K+ ++WT+L++ YG+HG GE A+ +
Sbjct: 509 QNAVPLFVSNCLIDMYAKCGSISDARLVFD-NMMAKNEVTWTSLMTGYGMHGYGEEALGI 568
Query: 471 YNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTVEICAVVVDMLG 530
+++M ++G K D +T++ VL AC SG++++G++ + +G+ P E A +VD+LG
Sbjct: 569 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 628
Query: 531 SIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVELEPENPSNFIS 590
G L AL I+ M +EP P VW A +S + E+ E A + EL + ++
Sbjct: 629 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 688
Query: 591 LSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADKAHPSSKFIYEV 615
LSNLYA A RW V +R+ M+ KG++K PGCSW+ T F V DK HP +K IY+V
Sbjct: 689 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 748
BLAST of Sed0014272 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 355.1 bits (910), Expect = 1.6e-96
Identity = 197/586 (33.62%), Postives = 333/586 (56.83%), Query Frame = 0
Query: 50 QSHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNC 109
Q HA + G E N+F+I L++ Y G L S + R + WN++++ +N
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 282
Query: 110 VFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFM-VDIVVA 169
A + EM + PD+FT+S++ A S + + GK +H +++ G + + V
Sbjct: 283 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 342
Query: 170 NSLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYA-NSNDCFFAKEAWTVFRSMQM 229
++L+ MY + ++FD M +R G WNA++AGY+ N +D KEA +F M+
Sbjct: 343 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD----KEALLLFIGMEE 402
Query: 230 D-GIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLD-FGSNVHLGCGLIDMYT 289
G+ N+ T++ ++P C + G +S + +H ++VK LD D F N L+DMY+
Sbjct: 403 SAGLLANSTTMAGVVPAC-VRSGAFSRKEAIHGFVVKRGLDRDRFVQNT-----LMDMYS 462
Query: 290 RDKNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQ----------MKD 349
R + + +F +++ R++ W M+ GYV +E + A +L +MQ +
Sbjct: 463 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 522
Query: 350 GIVPNRISLISLLPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENG 409
+ PN I+L+++LP+C +L+ L GK+IH +AI+ D ++ +AL+DMY+KCG L+
Sbjct: 523 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 582
Query: 410 RKVFETDSFCKDTISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGR 469
RKVF+ K+ I+W +I AYG+HG G+ AI L M+ G KP+ +T + V +AC
Sbjct: 583 RKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 642
Query: 470 SGLVNEGLQIYRTAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGPS-VW 529
SG+V+EGL+I+ DYG++P+ + A VVD+LG G +++A + M + + W
Sbjct: 643 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 702
Query: 530 GALVSASIRYKNYEMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTMKEK 589
+L+ AS + N E+ E+A + L++LEP S+++ L+N+Y++A WD E+R MKE+
Sbjct: 703 SSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 762
Query: 590 GLRKAPGCSWINFNSETHCFHVADKAHPSSKFIYEVLDHVFIIMKE 621
G+RK PGCSWI E H F D +HP S+ + L+ ++ M++
Sbjct: 763 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
BLAST of Sed0014272 vs. ExPASy Swiss-Prot
Match:
Q7XJN6 (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E26 PE=3 SV=1)
HSP 1 Score: 353.2 bits (905), Expect = 6.0e-96
Identity = 195/567 (34.39%), Postives = 309/567 (54.50%), Query Frame = 0
Query: 50 QSHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNC 109
Q H V+ GL + ++ T L+S YS G + E+ +F V + + IWN+++ Y +N
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 110 VFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVAN 169
+ A D F M+Q +++PD FTLS + S +G GKS+H + + + +
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 170 SLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQ--M 229
+LL++Y K G ++ +F M E++ +W +L++G + KEA VF M+
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK---FKEALKVFGDMKDDD 472
Query: 230 DGIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRD 289
D +KP++ ++S+ C + +G ++H ++K L L NV +G LID+Y++
Sbjct: 473 DSLKPDSDIMTSVTNACA-GLEALRFGLQVHGSMIKTGLVL----NVFVGSSLIDLYSKC 532
Query: 290 KNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISL 349
+ VF + + N+ W +M+ Y +N P+++ LF + + GI P+ +S+ S+
Sbjct: 533 GLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF-NLMLSQGIFPDSVSITSV 592
Query: 350 LPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKD 409
L A +S A L+ GK +HG+ +R D L NALIDMY KCG + +F+ K
Sbjct: 593 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH-KS 652
Query: 410 TISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYR 469
I+W +I YG HG A+ L+++M K G PD +T + ++SAC SG V EG I+
Sbjct: 653 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFE 712
Query: 470 TAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNY 529
QDYGI+P +E A +VD+LG G LE+A SFIK M +E S+W L+SAS + N
Sbjct: 713 FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 772
Query: 530 EMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINF 589
E+ L+ L+ +EPE S ++ L NLY A + A+L MKEKGL K PGCSWI
Sbjct: 773 ELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 832
Query: 590 NSETHCFHVADKAHPSSKFIYEVLDHV 615
+ T+ F + P I+ VL+ +
Sbjct: 833 SDRTNVFFSGGSSSPMKAEIFNVLNRL 849
BLAST of Sed0014272 vs. ExPASy TrEMBL
Match:
A0A6J1KRX1 (pentatricopeptide repeat-containing protein At3g12770-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497703 PE=4 SV=1)
HSP 1 Score: 1067.4 bits (2759), Expect = 2.3e-308
Identity = 522/632 (82.59%), Postives = 569/632 (90.03%), Query Frame = 0
Query: 1 MILVFVPKPCGLLFSRCYSTLFGSDVCPSHCLLHLLQHAVNCQSQKLILQSHAQVITHGL 60
M LVFVPKPCGL S CYSTLFG D+ PS LLH+LQHAVN QSQK I +SHAQVITHGL
Sbjct: 1 MNLVFVPKPCGLFISHCYSTLFGRDLYPSQRLLHILQHAVNQQSQKFIRESHAQVITHGL 60
Query: 61 EQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVFHGAFDRFNE 120
EQN FLITKLISAYS G L EST IF+LVS RTV IWNSLINGYVKNCVFHGAF RFNE
Sbjct: 61 EQNNFLITKLISAYSTCGDLNESTLIFDLVSTRTVCIWNSLINGYVKNCVFHGAFHRFNE 120
Query: 121 MQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSLLSMYFKYGE 180
MQQC+I+PDDFTLSTLAKASSE+ NV VGKSIHGK +RLGF+ DIVVANSL+SMYFKYGE
Sbjct: 121 MQQCDIVPDDFTLSTLAKASSELRNVTVGKSIHGKIVRLGFIFDIVVANSLISMYFKYGE 180
Query: 181 CKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAW-TVFRSMQMDGIKPNAITISS 240
CKESLKLFD+MPERNSGSWN LLAGYA+SNDCF+ KEAW V RSMQ+DG+KP+A TISS
Sbjct: 181 CKESLKLFDEMPERNSGSWNVLLAGYASSNDCFYVKEAWDIVVRSMQIDGVKPDAFTISS 240
Query: 241 LLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVIASRYVFNQ 300
LLPLCG PIGK +YGKELHCYIVKNELDLDFGSNVHLGCGLIDMY+RD + ASR+VF+Q
Sbjct: 241 LLPLCGNPIGKLNYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYSRDNKITASRHVFDQ 300
Query: 301 IKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPACNSLAGLMN 360
IK RNIYVWTAMVRGYVQN+DPD A ILFQEMQM+DGI+PNRISLISLLPACNSLAGLMN
Sbjct: 301 IKRRNIYVWTAMVRGYVQNKDPDKALILFQEMQMRDGILPNRISLISLLPACNSLAGLMN 360
Query: 361 GKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYG 420
GKQIHGFAIRK FNDDASLCNALIDMYSKCGSLE RKVFE+DSF KDTISWTTLISAYG
Sbjct: 361 GKQIHGFAIRKGFNDDASLCNALIDMYSKCGSLEKARKVFESDSFHKDTISWTTLISAYG 420
Query: 421 LHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTV 480
LHGQG+ +IRLYNDMIKLG KPD I VVGVLSAC RSGL+ EGLQ+Y TAVQDY ++PT
Sbjct: 421 LHGQGKESIRLYNDMIKLGIKPDQIAVVGVLSACSRSGLIKEGLQLYSTAVQDYRVEPTA 480
Query: 481 EICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVE 540
EICAV+VDMLG++GELEQAL+FIKTM +EPGPSVWGALVSASIRYK+Y+MLELAYR L+E
Sbjct: 481 EICAVIVDMLGNMGELEQALNFIKTMPLEPGPSVWGALVSASIRYKDYKMLELAYRSLIE 540
Query: 541 LEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADK 600
LEPENPSNFISLSNLYA+A+RWD+VAELR+TMKE+GLRK+PGCSWIN N++THCFHVADK
Sbjct: 541 LEPENPSNFISLSNLYASASRWDLVAELRHTMKERGLRKSPGCSWININTKTHCFHVADK 600
Query: 601 AHPSSKFIYEVLDHVFIIMKEHHCFDDLEYLI 632
AHPSSK IYEVLDHVF M E DDLEY I
Sbjct: 601 AHPSSKLIYEVLDHVFSTMNE-PISDDLEYWI 631
BLAST of Sed0014272 vs. ExPASy TrEMBL
Match:
A0A6J1CPK8 (pentatricopeptide repeat-containing protein At3g12770-like OS=Momordica charantia OX=3673 GN=LOC111013411 PE=4 SV=1)
HSP 1 Score: 1039.6 bits (2687), Expect = 5.2e-300
Identity = 504/599 (84.14%), Postives = 548/599 (91.49%), Query Frame = 0
Query: 32 LLHLLQHAVNCQSQKLILQSHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVS 91
LLH LQHA+N QSQKL QSHAQVIT GLEQN+FLITKLISAYSI G LKEST IF+LVS
Sbjct: 68 LLHFLQHAINHQSQKLTCQSHAQVITRGLEQNSFLITKLISAYSICGNLKESTLIFDLVS 127
Query: 92 IRTVYIWNSLINGYVKNCVFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKS 151
T+Y WNSLIN +VKN VFHGAFDRF EMQQC+I+PD FTLSTLAKAS+EIGNVAVGK
Sbjct: 128 TITIYTWNSLINAFVKNYVFHGAFDRFKEMQQCDIIPDHFTLSTLAKASTEIGNVAVGKL 187
Query: 152 IHGKSIRLGFMVDIVVANSLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSND 211
IHGKSIRLGFM+DIVVANSL+SMYFKYGEC+ SLKLFD+MPERNS SWN LLAGYA+S+D
Sbjct: 188 IHGKSIRLGFMLDIVVANSLVSMYFKYGECEASLKLFDEMPERNSASWNVLLAGYASSSD 247
Query: 212 CFFAKEAWTVFRSMQMDGIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDFG 271
CF+ KE W V RSMQ DGIKP+A TISS LPLCG PIGK SYGKELHCY+VKNELDLDFG
Sbjct: 248 CFYVKEVWEVVRSMQTDGIKPDAFTISSTLPLCGDPIGKLSYGKELHCYMVKNELDLDFG 307
Query: 272 SNVHLGCGLIDMYTRDKNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEM 331
SNVHLGC LIDMY+RD VIASRYVF+QIKS+NIYVWTAMVRGYVQNEDPD A ILFQEM
Sbjct: 308 SNVHLGCCLIDMYSRDNKVIASRYVFDQIKSKNIYVWTAMVRGYVQNEDPDKALILFQEM 367
Query: 332 QMKDGIVPNRISLISLLPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGS 391
QMKDGIVPNRISLISLLPAC+S AGLMNGKQIHGFAIRKEFNDD SLCNALIDMYSKCGS
Sbjct: 368 QMKDGIVPNRISLISLLPACSSHAGLMNGKQIHGFAIRKEFNDDVSLCNALIDMYSKCGS 427
Query: 392 LENGRKVFETDSFCKDTISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLS 451
LEN R+VFE+DSFCKD ISWTTLISA+GLHG+G+ AIRLYNDM++LG KPDPIT+VGVLS
Sbjct: 428 LENARRVFESDSFCKDAISWTTLISAFGLHGRGKEAIRLYNDMVELGIKPDPITIVGVLS 487
Query: 452 ACGRSGLVNEGLQIYRTAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGP 511
ACGRSGLVNEGLQIY T VQ++GIKPT EICAVVVD+LGSIGELEQALSFIKTM VEPGP
Sbjct: 488 ACGRSGLVNEGLQIYSTVVQEFGIKPTAEICAVVVDLLGSIGELEQALSFIKTMLVEPGP 547
Query: 512 SVWGALVSASIRYKNYEMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTM 571
VWGALVSAS++Y+NYEMLELAYR LVELEPEN SNFISLSNLYA+A+RWDVVAELRNTM
Sbjct: 548 GVWGALVSASVKYRNYEMLELAYRSLVELEPENASNFISLSNLYASASRWDVVAELRNTM 607
Query: 572 KEKGLRKAPGCSWINFNSETHCFHVADKAHPSSKFIYEVLDHVFIIMKEHHCFDDLEYL 631
KE+GLRKA GCSWI+ N++THCFHVADKAHPSSK IY+VLDHVFIIMKE HC+DDL Y+
Sbjct: 608 KERGLRKAAGCSWIDINTKTHCFHVADKAHPSSKLIYQVLDHVFIIMKEPHCYDDLGYV 666
BLAST of Sed0014272 vs. ExPASy TrEMBL
Match:
A0A1S4DYI5 (pentatricopeptide repeat-containing protein At3g12770-like OS=Cucumis melo OX=3656 GN=LOC103492869 PE=4 SV=1)
HSP 1 Score: 1024.2 bits (2647), Expect = 2.3e-295
Identity = 491/631 (77.81%), Postives = 551/631 (87.32%), Query Frame = 0
Query: 1 MILVFVPKPCGLLFSRCYSTLFGSDVCPSHCLLHLLQHAVNCQSQKLILQSHAQVITHGL 60
M LVFVPKPCGLL SRCYSTL D+CPS CLLH LQHA+N QSQK I QSHAQVIT GL
Sbjct: 1 MNLVFVPKPCGLLISRCYSTLSRPDLCPSRCLLHFLQHAINHQSQKRIHQSHAQVITQGL 60
Query: 61 EQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVFHGAFDRFNE 120
EQN FLITKL+SAYS G LKE IF+L SI+TV+IWNSLI+GYVKN +FHG F RFNE
Sbjct: 61 EQNPFLITKLLSAYSSCGDLKELNLIFDLASIKTVHIWNSLISGYVKNGMFHGVFGRFNE 120
Query: 121 MQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSLLSMYFKYGE 180
MQ+CNI+PDDFTLS LAKAS+E+GNV VGKSIHGKS+RLG + DI+VANSL+SMYFKYGE
Sbjct: 121 MQKCNIVPDDFTLSILAKASNELGNVVVGKSIHGKSLRLGLISDIIVANSLISMYFKYGE 180
Query: 181 CKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQMDGIKPNAITISSL 240
CKESLKLF++MPERNSGSWN LLAGYA+ +DCF+AKEAW R+MQMDGIKP+A TISSL
Sbjct: 181 CKESLKLFNEMPERNSGSWNVLLAGYASFSDCFYAKEAWEAVRNMQMDGIKPDAFTISSL 240
Query: 241 LPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVIASRYVFNQI 300
L CG P GK SYGKELHCYIVKN+LDLD GS H+ CGLIDMY+R+ N IASRYVF+QI
Sbjct: 241 LHFCGHPNGKLSYGKELHCYIVKNKLDLDSGSKFHISCGLIDMYSRENNTIASRYVFDQI 300
Query: 301 KSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPACNSLAGLMNG 360
KSRNIYVWTAMV GY QNEDPD A ILFQEMQMKDGIVPN+ISLISLLPAC+ AGL NG
Sbjct: 301 KSRNIYVWTAMVSGYAQNEDPDKALILFQEMQMKDGIVPNKISLISLLPACSLHAGLTNG 360
Query: 361 KQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYGL 420
KQIHG+A+RKE+ DD +LCNALIDMYSKCGSLE+ + VFETDSFCKD ISWTT+I AYGL
Sbjct: 361 KQIHGYAVRKEYLDDVTLCNALIDMYSKCGSLESAKNVFETDSFCKDVISWTTIILAYGL 420
Query: 421 HGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTVE 480
HG E +IRLYNDM++L KPD ITVV VLSACGR GLV+EGLQ+Y TAVQ++ I+PT E
Sbjct: 421 HGLAEESIRLYNDMVELSIKPDQITVVAVLSACGRCGLVSEGLQLYNTAVQEHKIEPTAE 480
Query: 481 ICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVEL 540
ICA VVDMLG+IGEL+QA SFIKTM VEPGPSVWGALVSASIRY+NYEMLELAYR+LVEL
Sbjct: 481 ICAAVVDMLGNIGELDQAFSFIKTMMVEPGPSVWGALVSASIRYRNYEMLELAYRYLVEL 540
Query: 541 EPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADKA 600
EP+NPSNFISLSNLYA+A+RWD+VAELRNTMK++GLRK PGCSWIN N+ THCFHVAD+
Sbjct: 541 EPDNPSNFISLSNLYASASRWDMVAELRNTMKKRGLRKTPGCSWININTTTHCFHVADRT 600
Query: 601 HPSSKFIYEVLDHVFIIMKEHHCFDDLEYLI 632
HP S IY VLDHVFI+MKE HC DD+E+LI
Sbjct: 601 HPISNLIYGVLDHVFIVMKEPHCSDDIEFLI 631
BLAST of Sed0014272 vs. ExPASy TrEMBL
Match:
A0A5A7UUQ3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00640 PE=4 SV=1)
HSP 1 Score: 1024.2 bits (2647), Expect = 2.3e-295
Identity = 491/631 (77.81%), Postives = 551/631 (87.32%), Query Frame = 0
Query: 1 MILVFVPKPCGLLFSRCYSTLFGSDVCPSHCLLHLLQHAVNCQSQKLILQSHAQVITHGL 60
M LVFVPKPCGLL SRCYSTL D+CPS CLLH LQHA+N QSQK I QSHAQVIT GL
Sbjct: 1 MNLVFVPKPCGLLISRCYSTLSRPDLCPSRCLLHFLQHAINHQSQKRIHQSHAQVITQGL 60
Query: 61 EQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVFHGAFDRFNE 120
EQN FLITKL+SAYS G LKE IF+L SI+TV+IWNSLI+GYVKN +FHG F RFNE
Sbjct: 61 EQNPFLITKLLSAYSSCGDLKELNLIFDLASIKTVHIWNSLISGYVKNGMFHGVFGRFNE 120
Query: 121 MQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSLLSMYFKYGE 180
MQ+CNI+PDDFTLS LAKAS+E+GNV VGKSIHGKS+RLG + DI+VANSL+SMYFKYGE
Sbjct: 121 MQKCNIVPDDFTLSILAKASNELGNVVVGKSIHGKSLRLGLISDIIVANSLISMYFKYGE 180
Query: 181 CKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQMDGIKPNAITISSL 240
CKESLKLF++MPERNSGSWN LLAGYA+ +DCF+AKEAW R+MQMDGIKP+A TISSL
Sbjct: 181 CKESLKLFNEMPERNSGSWNVLLAGYASFSDCFYAKEAWEAVRNMQMDGIKPDAFTISSL 240
Query: 241 LPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVIASRYVFNQI 300
L CG P GK SYGKELHCYIVKN+LDLD GS H+ CGLIDMY+R+ N IASRYVF+QI
Sbjct: 241 LHFCGHPNGKLSYGKELHCYIVKNKLDLDSGSKFHISCGLIDMYSRENNTIASRYVFDQI 300
Query: 301 KSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPACNSLAGLMNG 360
KSRNIYVWTAMV GY QNEDPD A ILFQEMQMKDGIVPN+ISLISLLPAC+ AGL NG
Sbjct: 301 KSRNIYVWTAMVSGYAQNEDPDKALILFQEMQMKDGIVPNKISLISLLPACSLHAGLTNG 360
Query: 361 KQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYGL 420
KQIHG+A+RKE+ DD +LCNALIDMYSKCGSLE+ + VFETDSFCKD ISWTT+I AYGL
Sbjct: 361 KQIHGYAVRKEYLDDVTLCNALIDMYSKCGSLESAKNVFETDSFCKDVISWTTIILAYGL 420
Query: 421 HGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTVE 480
HG E +IRLYNDM++L KPD ITVV VLSACGR GLV+EGLQ+Y TAVQ++ I+PT E
Sbjct: 421 HGLAEESIRLYNDMVELSIKPDQITVVAVLSACGRCGLVSEGLQLYNTAVQEHKIEPTAE 480
Query: 481 ICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVEL 540
ICA VVDMLG+IGEL+QA SFIKTM VEPGPSVWGALVSASIRY+NYEMLELAYR+LVEL
Sbjct: 481 ICAAVVDMLGNIGELDQAFSFIKTMMVEPGPSVWGALVSASIRYRNYEMLELAYRYLVEL 540
Query: 541 EPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADKA 600
EP+NPSNFISLSNLYA+A+RWD+VAELRNTMK++GLRK PGCSWIN N+ THCFHVAD+
Sbjct: 541 EPDNPSNFISLSNLYASASRWDMVAELRNTMKKRGLRKTPGCSWININTTTHCFHVADRT 600
Query: 601 HPSSKFIYEVLDHVFIIMKEHHCFDDLEYLI 632
HP S IY VLDHVFI+MKE HC DD+E+LI
Sbjct: 601 HPISNLIYGVLDHVFIVMKEPHCSDDIEFLI 631
BLAST of Sed0014272 vs. ExPASy TrEMBL
Match:
A0A6J1KQ82 (putative pentatricopeptide repeat-containing protein At3g23330 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497703 PE=4 SV=1)
HSP 1 Score: 939.5 bits (2427), Expect = 7.3e-270
Identity = 452/541 (83.55%), Postives = 496/541 (91.68%), Query Frame = 0
Query: 92 IRTVYIWNSLINGYVKNCVFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKS 151
+RTV IWNSLINGYVKNCVFHGAF RFNEMQQC+I+PDDFTLSTLAKASSE+ NV VGKS
Sbjct: 2 LRTVCIWNSLINGYVKNCVFHGAFHRFNEMQQCDIVPDDFTLSTLAKASSELRNVTVGKS 61
Query: 152 IHGKSIRLGFMVDIVVANSLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSND 211
IHGK +RLGF+ DIVVANSL+SMYFKYGECKESLKLFD+MPERNSGSWN LLAGYA+SND
Sbjct: 62 IHGKIVRLGFIFDIVVANSLISMYFKYGECKESLKLFDEMPERNSGSWNVLLAGYASSND 121
Query: 212 CFFAKEAW-TVFRSMQMDGIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDF 271
CF+ KEAW V RSMQ+DG+KP+A TISSLLPLCG PIGK +YGKELHCYIVKNELDLDF
Sbjct: 122 CFYVKEAWDIVVRSMQIDGVKPDAFTISSLLPLCGNPIGKLNYGKELHCYIVKNELDLDF 181
Query: 272 GSNVHLGCGLIDMYTRDKNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQE 331
GSNVHLGCGLIDMY+RD + ASR+VF+QIK RNIYVWTAMVRGYVQN+DPD A ILFQE
Sbjct: 182 GSNVHLGCGLIDMYSRDNKITASRHVFDQIKRRNIYVWTAMVRGYVQNKDPDKALILFQE 241
Query: 332 MQMKDGIVPNRISLISLLPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCG 391
MQM+DGI+PNRISLISLLPACNSLAGLMNGKQIHGFAIRK FNDDASLCNALIDMYSKCG
Sbjct: 242 MQMRDGILPNRISLISLLPACNSLAGLMNGKQIHGFAIRKGFNDDASLCNALIDMYSKCG 301
Query: 392 SLENGRKVFETDSFCKDTISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVL 451
SLE RKVFE+DSF KDTISWTTLISAYGLHGQG+ +IRLYNDMIKLG KPD I VVGVL
Sbjct: 302 SLEKARKVFESDSFHKDTISWTTLISAYGLHGQGKESIRLYNDMIKLGIKPDQIAVVGVL 361
Query: 452 SACGRSGLVNEGLQIYRTAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPG 511
SAC RSGL+ EGLQ+Y TAVQDY ++PT EICAV+VDMLG++GELEQAL+FIKTM +EPG
Sbjct: 362 SACSRSGLIKEGLQLYSTAVQDYRVEPTAEICAVIVDMLGNMGELEQALNFIKTMPLEPG 421
Query: 512 PSVWGALVSASIRYKNYEMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNT 571
PSVWGALVSASIRYK+Y+MLELAYR L+ELEPENPSNFISLSNLYA+A+RWD+VAELR+T
Sbjct: 422 PSVWGALVSASIRYKDYKMLELAYRSLIELEPENPSNFISLSNLYASASRWDLVAELRHT 481
Query: 572 MKEKGLRKAPGCSWINFNSETHCFHVADKAHPSSKFIYEVLDHVFIIMKEHHCFDDLEYL 631
MKE+GLRK+PGCSWIN N++THCFHVADKAHPSSK IYEVLDHVF M E DDLEY
Sbjct: 482 MKERGLRKSPGCSWININTKTHCFHVADKAHPSSKLIYEVLDHVFSTMNE-PISDDLEYW 541
BLAST of Sed0014272 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 374.4 bits (960), Expect = 1.8e-103
Identity = 203/573 (35.43%), Postives = 326/573 (56.89%), Query Frame = 0
Query: 50 QSHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNC 109
Q HA+++ GL+ + FLITKLI A S FG + + ++F+ + ++ WN++I GY +N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 110 VFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVAN 169
F A ++ MQ + PD FT L KA S + ++ +G+ +H + RLGF D+ V N
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 170 SLLSMYFKYGECKESLKLFD--KMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQM 229
L+++Y K + +F+ +PER SW A+++ YA + + EA +F M+
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE---PMEALEIFSQMRK 218
Query: 230 DGIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRD 289
+KP+ + + S+L + G+ +H +VK L+++ L L MY +
Sbjct: 219 MDVKPDWVALVSVLNAFTC-LQDLKQGRSIHASVVKMGLEIE----PDLLISLNTMYAKC 278
Query: 290 KNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISL 349
V ++ +F+++KS N+ +W AM+ GY +N A +F EM KD + P+ IS+ S
Sbjct: 279 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSA 338
Query: 350 LPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKD 409
+ AC + L + ++ + R ++ DD + +ALIDM++KCGS+E R VF+ + +D
Sbjct: 339 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR-TLDRD 398
Query: 410 TISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYR 469
+ W+ +I YGLHG+ AI LY M + G P+ +T +G+L AC SG+V EG +
Sbjct: 399 VVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF- 458
Query: 470 TAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNY 529
+ D+ I P + A V+D+LG G L+QA IK M V+PG +VWGAL+SA ++++
Sbjct: 459 NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV 518
Query: 530 EMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINF 589
E+ E A + L ++P N +++ LSNLYAAA WD VAE+R MKEKGL K GCSW+
Sbjct: 519 ELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 578
Query: 590 NSETHCFHVADKAHPSSKFIYEVLDHVFIIMKE 621
F V DK+HP + I ++ + +KE
Sbjct: 579 RGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
BLAST of Sed0014272 vs. TAIR 10
Match:
AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 358.6 bits (919), Expect = 1.0e-98
Identity = 196/569 (34.45%), Postives = 314/569 (55.18%), Query Frame = 0
Query: 52 HAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCVF 111
H V+ +G E + ++ LI+ Y G +K + +F+ + R + WN++I+GY +N +
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 112 HGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVANSL 171
H + F M+ ++ PD TL+++ A +G+ +G+ IH I GF VDI V NSL
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 172 LSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQMDGIK 231
MY G +E+ KLF +M ++ SW +++GY + F +A +R M D +K
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN---FLPDKAIDTYRMMDQDSVK 398
Query: 232 PNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRDKNVI 291
P+ IT++++L C +G G ELH +K L S V + LI+MY++ K +
Sbjct: 399 PDEITVAAVLSACA-TLGDLDTGVELHKLAIKARLI----SYVIVANNLINMYSKCKCID 458
Query: 292 ASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISLLPAC 351
+ +F+ I +N+ WT+++ G N A I ++M+M + PN I+L + L AC
Sbjct: 459 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAAC 518
Query: 352 NSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISW 411
+ LM GK+IH +R D L NAL+DMY +CG + F + KD SW
Sbjct: 519 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK--KDVTSW 578
Query: 412 TTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQ 471
L++ Y GQG + + L++ M+K +PD IT + +L C +S +V +GL +Y + ++
Sbjct: 579 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL-MYFSKME 638
Query: 472 DYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLE 531
DYG+ P ++ A VVD+LG GEL++A FI+ M V P P+VWGAL++A + ++ E
Sbjct: 639 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 698
Query: 532 LAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSET 591
L+ + + EL+ ++ +I L NLYA +W VA++R MKE GL GCSW+ +
Sbjct: 699 LSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKV 758
Query: 592 HCFHVADKAHPSSKFIYEVLDHVFIIMKE 621
H F DK HP +K I VL+ + M E
Sbjct: 759 HAFLSDDKYHPQTKEINTVLEGFYEKMSE 774
BLAST of Sed0014272 vs. TAIR 10
Match:
AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 355.9 bits (912), Expect = 6.6e-98
Identity = 209/605 (34.55%), Postives = 323/605 (53.39%), Query Frame = 0
Query: 51 SHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNCV 110
+HA + G N F+ L++ YS +L ++ ++F+ +S+ V WNS+I Y K
Sbjct: 149 AHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK 208
Query: 111 FHGAFDRFNEM-QQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVAN 170
A + F+ M + PD+ TL + + +G ++GK +H ++ + ++ V N
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 171 SLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSNDC-----FFAK-------- 230
L+ MY K G E+ +F M ++ SWNA++AGY+ F K
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 231 -------------------EAWTVFRSMQMDGIKPNAITISSLLPLCGIPIGKWSYGKEL 290
EA V R M GIKPN +T+ S+L C +G +GKE+
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA-SVGALMHGKEI 388
Query: 291 HCYIVKNELDL---DFGSNVHLGCGLIDMYTRDKNVIASRYVFNQI--KSRNIYVWTAMV 350
HCY +K +DL G + LIDMY + K V +R +F+ + K R++ WT M+
Sbjct: 389 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 448
Query: 351 RGYVQNEDPDMAFILFQEMQMKD-GIVPNRISLISLLPACNSLAGLMNGKQIHGFAIRKE 410
GY Q+ D + A L EM +D PN ++ L AC SLA L GKQIH +A+R +
Sbjct: 449 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 508
Query: 411 FND-DASLCNALIDMYSKCGSLENGRKVFETDSFCKDTISWTTLISAYGLHGQGEVAIRL 470
N + N LIDMY+KCGS+ + R VF+ + K+ ++WT+L++ YG+HG GE A+ +
Sbjct: 509 QNAVPLFVSNCLIDMYAKCGSISDARLVFD-NMMAKNEVTWTSLMTGYGMHGYGEEALGI 568
Query: 471 YNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYRTAVQDYGIKPTVEICAVVVDMLG 530
+++M ++G K D +T++ VL AC SG++++G++ + +G+ P E A +VD+LG
Sbjct: 569 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 628
Query: 531 SIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNYEMLELAYRFLVELEPENPSNFIS 590
G L AL I+ M +EP P VW A +S + E+ E A + EL + ++
Sbjct: 629 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 688
Query: 591 LSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINFNSETHCFHVADKAHPSSKFIYEV 615
LSNLYA A RW V +R+ M+ KG++K PGCSW+ T F V DK HP +K IY+V
Sbjct: 689 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 748
BLAST of Sed0014272 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 355.1 bits (910), Expect = 1.1e-97
Identity = 197/586 (33.62%), Postives = 333/586 (56.83%), Query Frame = 0
Query: 50 QSHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNC 109
Q HA + G E N+F+I L++ Y G L S + R + WN++++ +N
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 282
Query: 110 VFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFM-VDIVVA 169
A + EM + PD+FT+S++ A S + + GK +H +++ G + + V
Sbjct: 283 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 342
Query: 170 NSLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYA-NSNDCFFAKEAWTVFRSMQM 229
++L+ MY + ++FD M +R G WNA++AGY+ N +D KEA +F M+
Sbjct: 343 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD----KEALLLFIGMEE 402
Query: 230 D-GIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLD-FGSNVHLGCGLIDMYT 289
G+ N+ T++ ++P C + G +S + +H ++VK LD D F N L+DMY+
Sbjct: 403 SAGLLANSTTMAGVVPAC-VRSGAFSRKEAIHGFVVKRGLDRDRFVQNT-----LMDMYS 462
Query: 290 RDKNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQ----------MKD 349
R + + +F +++ R++ W M+ GYV +E + A +L +MQ +
Sbjct: 463 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 522
Query: 350 GIVPNRISLISLLPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENG 409
+ PN I+L+++LP+C +L+ L GK+IH +AI+ D ++ +AL+DMY+KCG L+
Sbjct: 523 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 582
Query: 410 RKVFETDSFCKDTISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGR 469
RKVF+ K+ I+W +I AYG+HG G+ AI L M+ G KP+ +T + V +AC
Sbjct: 583 RKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 642
Query: 470 SGLVNEGLQIYRTAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGPS-VW 529
SG+V+EGL+I+ DYG++P+ + A VVD+LG G +++A + M + + W
Sbjct: 643 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 702
Query: 530 GALVSASIRYKNYEMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTMKEK 589
+L+ AS + N E+ E+A + L++LEP S+++ L+N+Y++A WD E+R MKE+
Sbjct: 703 SSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 762
Query: 590 GLRKAPGCSWINFNSETHCFHVADKAHPSSKFIYEVLDHVFIIMKE 621
G+RK PGCSWI E H F D +HP S+ + L+ ++ M++
Sbjct: 763 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
BLAST of Sed0014272 vs. TAIR 10
Match:
AT2G40720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 353.2 bits (905), Expect = 4.3e-97
Identity = 195/567 (34.39%), Postives = 309/567 (54.50%), Query Frame = 0
Query: 50 QSHAQVITHGLEQNTFLITKLISAYSIFGALKESTRIFELVSIRTVYIWNSLINGYVKNC 109
Q H V+ GL + ++ T L+S YS G + E+ +F V + + IWN+++ Y +N
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 110 VFHGAFDRFNEMQQCNIMPDDFTLSTLAKASSEIGNVAVGKSIHGKSIRLGFMVDIVVAN 169
+ A D F M+Q +++PD FTLS + S +G GKS+H + + + +
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 170 SLLSMYFKYGECKESLKLFDKMPERNSGSWNALLAGYANSNDCFFAKEAWTVFRSMQ--M 229
+LL++Y K G ++ +F M E++ +W +L++G + KEA VF M+
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK---FKEALKVFGDMKDDD 472
Query: 230 DGIKPNAITISSLLPLCGIPIGKWSYGKELHCYIVKNELDLDFGSNVHLGCGLIDMYTRD 289
D +KP++ ++S+ C + +G ++H ++K L L NV +G LID+Y++
Sbjct: 473 DSLKPDSDIMTSVTNACA-GLEALRFGLQVHGSMIKTGLVL----NVFVGSSLIDLYSKC 532
Query: 290 KNVIASRYVFNQIKSRNIYVWTAMVRGYVQNEDPDMAFILFQEMQMKDGIVPNRISLISL 349
+ VF + + N+ W +M+ Y +N P+++ LF + + GI P+ +S+ S+
Sbjct: 533 GLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF-NLMLSQGIFPDSVSITSV 592
Query: 350 LPACNSLAGLMNGKQIHGFAIRKEFNDDASLCNALIDMYSKCGSLENGRKVFETDSFCKD 409
L A +S A L+ GK +HG+ +R D L NALIDMY KCG + +F+ K
Sbjct: 593 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH-KS 652
Query: 410 TISWTTLISAYGLHGQGEVAIRLYNDMIKLGNKPDPITVVGVLSACGRSGLVNEGLQIYR 469
I+W +I YG HG A+ L+++M K G PD +T + ++SAC SG V EG I+
Sbjct: 653 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFE 712
Query: 470 TAVQDYGIKPTVEICAVVVDMLGSIGELEQALSFIKTMAVEPGPSVWGALVSASIRYKNY 529
QDYGI+P +E A +VD+LG G LE+A SFIK M +E S+W L+SAS + N
Sbjct: 713 FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 772
Query: 530 EMLELAYRFLVELEPENPSNFISLSNLYAAANRWDVVAELRNTMKEKGLRKAPGCSWINF 589
E+ L+ L+ +EPE S ++ L NLY A + A+L MKEKGL K PGCSWI
Sbjct: 773 ELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 832
Query: 590 NSETHCFHVADKAHPSSKFIYEVLDHV 615
+ T+ F + P I+ VL+ +
Sbjct: 833 SDRTNVFFSGGSSSPMKAEIFNVLNRL 849
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038899569.1 | 0.0e+00 | 82.57 | pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Benincasa... | [more] |
XP_023004361.1 | 4.8e-308 | 82.59 | pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Cucurbita... | [more] |
XP_023513452.1 | 2.0e-306 | 81.96 | pentatricopeptide repeat-containing protein At3g12770-like isoform X1 [Cucurbita... | [more] |
KAG7025484.1 | 3.9e-302 | 81.54 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022143534.1 | 1.1e-299 | 84.14 | pentatricopeptide repeat-containing protein At3g12770-like [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Q9LTV8 | 2.5e-102 | 35.43 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9M9E2 | 1.4e-97 | 34.45 | Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... | [more] |
Q9LFL5 | 9.3e-97 | 34.55 | Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... | [more] |
Q7Y211 | 1.6e-96 | 33.62 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
Q7XJN6 | 6.0e-96 | 34.39 | Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KRX1 | 2.3e-308 | 82.59 | pentatricopeptide repeat-containing protein At3g12770-like isoform X1 OS=Cucurbi... | [more] |
A0A6J1CPK8 | 5.2e-300 | 84.14 | pentatricopeptide repeat-containing protein At3g12770-like OS=Momordica charanti... | [more] |
A0A1S4DYI5 | 2.3e-295 | 77.81 | pentatricopeptide repeat-containing protein At3g12770-like OS=Cucumis melo OX=36... | [more] |
A0A5A7UUQ3 | 2.3e-295 | 77.81 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1KQ82 | 7.3e-270 | 83.55 | putative pentatricopeptide repeat-containing protein At3g23330 isoform X2 OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT3G12770.1 | 1.8e-103 | 35.43 | mitochondrial editing factor 22 | [more] |
AT1G15510.1 | 1.0e-98 | 34.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G16860.1 | 6.6e-98 | 34.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G57430.1 | 1.1e-97 | 33.62 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G40720.1 | 4.3e-97 | 34.39 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |