Sed0014252 (gene) Chayote v1

Overview


Name	Sed0014252
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor TCP13-like
Location	LG06: 39246876 .. 39248766 (-)
RNA-Seq Expression	Sed0014252
Synteny	Sed0014252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGATTCCAGCATCTTCCTTTATTTTTATTTTGTTTTCCTAAGCCGGCTCAAGCCTTGAGATGCAAATAAAAAGCAAAAATCTTTGTTATTTCAAAAAGGAAAAACCAATATGATACAGCTAGAATTGAAGCTCATCAATTGCATCTTCAAATTTCAAGGTTTCCAAATACATCAAAACCAGTTTTTACACAAGTGCTAGAAGCTCAAACACAAAAGGGTTCTATGCGTAAGTCTTATTACATTTTTCTGTTCAATCTCTCAAAATTTCTCTCTCTTAATATTCAGAAGATGATTCAGCCAATTCATTCTTTTCTTCTGCTTTTTCTGATTTGAGCTCGAAAATAACCAAACAAATGGGCACACAATTCTAGTTTCACTAGCAGATAGTATTAGTTTAATCAGTAGAGAAAGATGAGAACTTGCAAAATTTTTGGGGTTTTTTTTTTTTTTTAATTACTTGAAGTTTCACTTGATATCAAACATAAATTCTTTTTGGGGTTTGAAGTAGTTTTAAATTCTACCATTCAAATTCTTGTATCTTGAACTAGCACTCGATGTTTTCAAGAAATTTTACTGTTCTGTGTTAAAATATTTCATAAAAAGGATTAAATTTCTTCATGTGTACTTTATTCTTGATCTTAGGGTTTATGGAGCTTGTTCCATTTCTATACTAACAAAAAATTGACTCAAAATTTGAGGGTTTTGTGTGTGTGTATATATATGTATGTATATTCTCTTTACAATCTAATGTTCATGTATTGATTTAGCTGTAGAGAAACATGGTGAAAGGCATAAGATGATTAGTACAAATTCAGAAGAAGAAGAAGAGAATTCACCTCCAAAACTAGCAGCAGCAACAGCAGCTTCGTCGAGCTCATCGGCAGCGACACCATGGCTTAAGCTTAAGGATCCAAGGATCGTGCGTGTGTCGCGAGCTTTTGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGGGGGCTGCGCGACCGGCGTGTAAGGCTTTCGGTTTCGACCGCAATTCAACTCTATGATCTTCAAGATCGCCTTGGTCTTAACCAACCGAGCAAGGTCGTGGACTGGTTGCTCAATGCCGCCAAGGATGAAATTGACGAACTCCCTCCATTGCCAATCCCATCCGAAAGCCTTGGCCTTAACTACCAATCCATGCTACTAGCTCACACCCAAGCACACCCGCTTAGGTCGGAGTTCAAAATCAACTGCGACAGCGGCATCGGCAAGGAAGTCGAGGACGCCGCCGTGGAACAAAAGCAACCGAAATCGAATTCTAATCCCTCACACCCTTCTTCCTTCTCAGCCCTTTTAAACAATGTGAGTGCTCTTCCATTTGGTTACCATCATTGGGAGCCCTCATCAACAACAAATCTTCCATTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATAATGTGAATTTGTCTTTGCCTTCCCCTTTGTCCCTCTCAACTGGCTCTCAGTTCATGGAGTTCAATCACTTGCATCAAAATTTCTTGACTAATTCAAATTCTCTTGCACATCCTTTGCACTCAATAAACCAATCTGCTCATGTTAGGCCTTTCCATTTCAGTATGGCTCCCAAATTTGTTACTCAAGACAAGAATGACAATGGAGATCATACACCAAATAAGGATGATCACTTTTGTTCTGAATGAAACATCATTGGACTTAGGATAATTGGATTGGATCTTCTTCTCATTTAGAGGAGAGATCATAGCAAGAATTACACTGAATTAAAAAGGTAATTTACTTTTTGTGCTGATTCTTAGAATTGCAATCAAGAGAACCTTGGAATTGCTAGTTTGATTTTTTTTTTTTTATTTATTGTTTTGTTTGGTAATCATACATATATTGCTCATTAGGTA

mRNA sequence

GTTGGATTCCAGCATCTTCCTTTATTTTTATTTTGTTTTCCTAAGCCGGCTCAAGCCTTGAGATGCAAATAAAAAGCAAAAATCTTTGTTATTTCAAAAAGGAAAAACCAATATGATACAGCTAGAATTGAAGCTCATCAATTGCATCTTCAAATTTCAAGGTTTCCAAATACATCAAAACCAGTTTTTACACAAGTGCTAGAAGCTCAAACACAAAAGGGTTCTATGCCTGTAGAGAAACATGGTGAAAGGCATAAGATGATTAGTACAAATTCAGAAGAAGAAGAAGAGAATTCACCTCCAAAACTAGCAGCAGCAACAGCAGCTTCGTCGAGCTCATCGGCAGCGACACCATGGCTTAAGCTTAAGGATCCAAGGATCGTGCGTGTGTCGCGAGCTTTTGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGGGGGCTGCGCGACCGGCGTGTAAGGCTTTCGGTTTCGACCGCAATTCAACTCTATGATCTTCAAGATCGCCTTGGTCTTAACCAACCGAGCAAGGTCGTGGACTGGTTGCTCAATGCCGCCAAGGATGAAATTGACGAACTCCCTCCATTGCCAATCCCATCCGAAAGCCTTGGCCTTAACTACCAATCCATGCTACTAGCTCACACCCAAGCACACCCGCTTAGGTCGGAGTTCAAAATCAACTGCGACAGCGGCATCGGCAAGGAAGTCGAGGACGCCGCCGTGGAACAAAAGCAACCGAAATCGAATTCTAATCCCTCACACCCTTCTTCCTTCTCAGCCCTTTTAAACAATGTGAGTGCTCTTCCATTTGGTTACCATCATTGGGAGCCCTCATCAACAACAAATCTTCCATTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATAATGTGAATTTGTCTTTGCCTTCCCCTTTGTCCCTCTCAACTGGCTCTCAGTTCATGGAGTTCAATCACTTGCATCAAAATTTCTTGACTAATTCAAATTCTCTTGCACATCCTTTGCACTCAATAAACCAATCTGCTCATGTTAGGCCTTTCCATTTCAGTATGGCTCCCAAATTTGTTACTCAAGACAAGAATGACAATGGAGATCATACACCAAATAAGGATGATCACTTTTGTTCTGAATGAAACATCATTGGACTTAGGATAATTGGATTGGATCTTCTTCTCATTTAGAGGAGAGATCATAGCAAGAATTACACTGAATTAAAAAGGTAATTTACTTTTTGTGCTGATTCTTAGAATTGCAATCAAGAGAACCTTGGAATTGCTAGTTTGATTTTTTTTTTTTTATTTATTGTTTTGTTTGGTAATCATACATATATTGCTCATTAGGTA

Coding sequence (CDS)

ATGCCTGTAGAGAAACATGGTGAAAGGCATAAGATGATTAGTACAAATTCAGAAGAAGAAGAAGAGAATTCACCTCCAAAACTAGCAGCAGCAACAGCAGCTTCGTCGAGCTCATCGGCAGCGACACCATGGCTTAAGCTTAAGGATCCAAGGATCGTGCGTGTGTCGCGAGCTTTTGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGGGGGCTGCGCGACCGGCGTGTAAGGCTTTCGGTTTCGACCGCAATTCAACTCTATGATCTTCAAGATCGCCTTGGTCTTAACCAACCGAGCAAGGTCGTGGACTGGTTGCTCAATGCCGCCAAGGATGAAATTGACGAACTCCCTCCATTGCCAATCCCATCCGAAAGCCTTGGCCTTAACTACCAATCCATGCTACTAGCTCACACCCAAGCACACCCGCTTAGGTCGGAGTTCAAAATCAACTGCGACAGCGGCATCGGCAAGGAAGTCGAGGACGCCGCCGTGGAACAAAAGCAACCGAAATCGAATTCTAATCCCTCACACCCTTCTTCCTTCTCAGCCCTTTTAAACAATGTGAGTGCTCTTCCATTTGGTTACCATCATTGGGAGCCCTCATCAACAACAAATCTTCCATTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATAATGTGAATTTGTCTTTGCCTTCCCCTTTGTCCCTCTCAACTGGCTCTCAGTTCATGGAGTTCAATCACTTGCATCAAAATTTCTTGACTAATTCAAATTCTCTTGCACATCCTTTGCACTCAATAAACCAATCTGCTCATGTTAGGCCTTTCCATTTCAGTATGGCTCCCAAATTTGTTACTCAAGACAAGAATGACAATGGAGATCATACACCAAATAAGGATGATCACTTTTGTTCTGAATGA

Protein sequence

MPVEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSHPSSFSALLNNVSALPFGYHHWEPSSTTNLPFFTSQAEDLHNFNNVNLSLPSPLSLSTGSQFMEFNHLHQNFLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKNDNGDHTPNKDDHFCSE

Homology

[Close]

BLAST of Sed0014252 vs. NCBI nr
Match: XP_022980679.1 (transcription factor TCP17-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 389.0 bits (998), Expect = 3.7e-104
Identity = 227/306 (74.18%), Postives = 249/306 (81.37%), Query Frame = 0


Query: 1   MPVEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFG 60
           MP  KH ERH MI TNS  +EENSPPKLAA++++S++++ ATPWL+LKDPRIVRVSRAFG
Sbjct: 1   MPAGKHDERHTMI-TNS--KEENSPPKLAASSSSSAAAAVATPWLRLKDPRIVRVSRAFG 60

Query: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP 120
           GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELP
Sbjct: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELP 120

Query: 121 PLPIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSH 180
           PLPIPS SLGL+YQSML  HT AH  R EFKIN  SGI K   D   EQKQ KSNSN   
Sbjct: 121 PLPIPSASLGLHYQSMLPPHT-AH--RPEFKIN--SGIDKVEIDDDDEQKQHKSNSN--- 180

Query: 181 PSSFSALLNNVSALPFGYHHWEP-----SSTTNLPFFTSQAEDLHNFNNVNLSLPSPLSL 240
           PSSFSALLNNVSA PFG+ HW+P     SSTTNLPFFTSQAEDLHNFN+V     +PLSL
Sbjct: 181 PSSFSALLNNVSAPPFGF-HWDPSSSSSSSTTNLPFFTSQAEDLHNFNHV-----TPLSL 240

Query: 241 STGSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKNDNGDH 300
           STGSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV+QDKN+NGD 
Sbjct: 241 STGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVSQDKNNNGDP 288

[Close]

BLAST of Sed0014252 vs. NCBI nr
Match: XP_022980680.1 (transcription factor TCP17-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 5.3e-103
Identity = 225/304 (74.01%), Postives = 248/304 (81.58%), Query Frame = 0


Query: 3   VEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFGGK 62
           + KH ERH MI TNS  +EENSPPKLAA++++S++++ ATPWL+LKDPRIVRVSRAFGGK
Sbjct: 1   MRKHDERHTMI-TNS--KEENSPPKLAASSSSSAAAAVATPWLRLKDPRIVRVSRAFGGK 60

Query: 63  DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPL 122
           DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELPPL
Sbjct: 61  DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPL 120

Query: 123 PIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSHPS 182
           PIPS SLGL+YQSML  HT AH  R EFKIN  SGI K   D   EQKQ KSNSN   PS
Sbjct: 121 PIPSASLGLHYQSMLPPHT-AH--RPEFKIN--SGIDKVEIDDDDEQKQHKSNSN---PS 180

Query: 183 SFSALLNNVSALPFGYHHWEP-----SSTTNLPFFTSQAEDLHNFNNVNLSLPSPLSLST 242
           SFSALLNNVSA PFG+ HW+P     SSTTNLPFFTSQAEDLHNFN+V     +PLSLST
Sbjct: 181 SFSALLNNVSAPPFGF-HWDPSSSSSSSTTNLPFFTSQAEDLHNFNHV-----TPLSLST 240

Query: 243 GSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKNDNGDHTP 300
           GSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV+QDKN+NGD   
Sbjct: 241 GSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVSQDKNNNGDPAH 286

[Close]

BLAST of Sed0014252 vs. NCBI nr
Match: KAG6581736.1 (Transcription factor TCP13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381.7 bits (979), Expect = 5.8e-102
Identity = 230/313 (73.48%), Postives = 248/313 (79.23%), Query Frame = 0


Query: 1   MPVEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFG 60
           MP  KH ERH MI TNS  +EENSPPKL A  ++SSS++ ATPWL+LKDPRIVRVSRAFG
Sbjct: 37  MPAGKHDERHTMI-TNS--KEENSPPKLVA--SSSSSAAVATPWLRLKDPRIVRVSRAFG 96

Query: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP 120
           GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELP
Sbjct: 97  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELP 156

Query: 121 PLPIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSH 180
           PLPIPS SLGL+YQSML  H  AH  RSEFKIN  SGI K   D   EQKQ KSNSN   
Sbjct: 157 PLPIPSASLGLHYQSMLPPHI-AH--RSEFKIN--SGIDKVEIDDDDEQKQHKSNSN--- 216

Query: 181 PSSFSALLNNVSALPFGYHHWEP-------SSTTNLPFFTSQAEDLHNFNNVNLSLPSPL 240
           PSSFSALLNNVSA PFG+ HW+P       SSTTNLPFFTSQAEDLHNFN+V     +PL
Sbjct: 217 PSSFSALLNNVSAPPFGF-HWDPSASSSSSSSTTNLPFFTSQAEDLHNFNHV-----TPL 276

Query: 241 SLSTGSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKNDNG 300
           SLSTGSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV Q KN+NG
Sbjct: 277 SLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVAQHKNNNG 328

Query: 301 DHTPNKDDHFCSE 305
           D   NK+D F S+
Sbjct: 337 D-PANKEDGFGSD 328

[Close]

BLAST of Sed0014252 vs. NCBI nr
Match: XP_023527017.1 (transcription factor TCP17-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-101
Identity = 232/315 (73.65%), Postives = 252/315 (80.00%), Query Frame = 0


Query: 1   MPVEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFG 60
           MP  KH ERH MI TNS  +EENSPPKLAA  ++SSS++ ATPWL+LKDPRIVRVSRAFG
Sbjct: 1   MPAGKHDERHTMI-TNS--KEENSPPKLAA--SSSSSAAVATPWLRLKDPRIVRVSRAFG 60

Query: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP 120
           GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELP
Sbjct: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELP 120

Query: 121 PLPIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGK-EV-EDAAVEQKQPKSNSNP 180
           PLPIPS SLGL+YQSML  H  AH  RSEFKIN  SGI K E+ +D   EQKQ KSNSN 
Sbjct: 121 PLPIPSASLGLHYQSMLPPHI-AH--RSEFKIN--SGIDKVEIDDDDDDEQKQHKSNSN- 180

Query: 181 SHPSSFSALLNNVSALPFGYHHWEP-------SSTTNLPFFTSQAEDLHNFNNVNLSLPS 240
             PSSFSALLNNVSA PFG+ HW+P       SSTTNLPFFTSQAEDLHNFN+V     +
Sbjct: 181 --PSSFSALLNNVSAPPFGF-HWDPSLSSSSSSSTTNLPFFTSQAEDLHNFNHV-----T 240

Query: 241 PLSLSTGSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKND 300
           PLSLSTGSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV Q KN+
Sbjct: 241 PLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVAQHKNN 294

Query: 301 NGDHTPNKDDHFCSE 305
           NGD   NK+D F S+
Sbjct: 301 NGD-PANKEDGFGSD 294

[Close]

BLAST of Sed0014252 vs. NCBI nr
Match: XP_022955449.1 (transcription factor TCP17-like isoform X1 [Cucurbita moschata] >KAG7011073.1 Transcription factor TCP13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-101
Identity = 230/315 (73.02%), Postives = 248/315 (78.73%), Query Frame = 0


Query: 1   MPVEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFG 60
           MP  KH ERH MI TNS  +EENSPPKL A  ++SSS++ ATPWL+LKDPRIVRVSRAFG
Sbjct: 1   MPAGKHDERHTMI-TNS--KEENSPPKLVA--SSSSSAALATPWLRLKDPRIVRVSRAFG 60

Query: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP 120
           GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELP
Sbjct: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELP 120

Query: 121 PLPIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSH 180
           PLPIPS SLGL+YQSML  H  AH  RSEFKIN  SGI K   D   EQKQ KSNSN   
Sbjct: 121 PLPIPSASLGLHYQSMLPPHI-AH--RSEFKIN--SGIDKVEIDDDDEQKQHKSNSN--- 180

Query: 181 PSSFSALLNNVSALPFGYHHWEP---------SSTTNLPFFTSQAEDLHNFNNVNLSLPS 240
           PSSFSALLNNVSA PFG+ HW+P         SSTTNLPFFTSQAEDLHNFN+V     +
Sbjct: 181 PSSFSALLNNVSAPPFGF-HWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNFNHV-----T 240

Query: 241 PLSLSTGSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKND 300
           PLSLSTGSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV Q KN+
Sbjct: 241 PLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVAQHKNN 294

Query: 301 NGDHTPNKDDHFCSE 305
           NGD   NK+D F S+
Sbjct: 301 NGD-PANKEDGFGSD 294

[Close]

BLAST of Sed0014252 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-36
Identity = 113/279 (40.50%), Postives = 147/279 (52.69%), Query Frame = 0


Query: 9   RHKMISTNSEEEEENSPP-KLAAATAASSSSSAATPWLKLKDPRIVRVSRAFGGKDRHSK 68
           R + +  + EE E  +   K       +S SS+++ W+K KDPRIVRVSRAFGGKDRHSK
Sbjct: 21  REREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSK 80

Query: 69  VCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSE 128
           VCT+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+AAK+EIDELPPLPI  E
Sbjct: 81  VCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPE 140

Query: 129 SLGL--NYQSMLLAHTQ--AHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSN-----SNP 188
           +  +  ++QS L    +    P +  FKIN    + K    +  E  + K       +N 
Sbjct: 141 NFSIFNHHQSFLNLGQRPGQDPTQLGFKIN--GCVQKSTTTSREENDREKGENDVVYTNN 200

Query: 189 SHPSSFSALLNNVSALPFGYHHWEPSSTTNLPFFTSQAEDLHNFNNVNLSLPS------- 248
            H  S+    N        +HH     +    + + Q   L  F +  L  P        
Sbjct: 201 HHVGSYGTYHNLEH-----HHHHHQHLSLQADYHSHQLHSLVPFPSQILVCPMTTSPTTT 260

Query: 249 ------PLSLSTGSQFME-------FNHLHQNFLTNSNS 258
                 P S S GS  ME        +H     + NS+S
Sbjct: 261 TIQSLFPSSSSAGSGTMETLDPRQMVSHFQMPLMGNSSS 292

[Close]

BLAST of Sed0014252 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-32
Identity = 68/91 (74.73%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 36  SSSSAATPWLK-LKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQD 95
           SS S++  W    ++PRIVRVSR FGGKDRHSKVCT+RGLRDRR+RLSV TAIQLYDLQD
Sbjct: 37  SSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQD 96

Query: 96  RLGLNQPSKVVDWLLNAAKDEIDELPPLPIP 126
           RLGL+QPSKV+DWLL AAKD++D+LPPL  P
Sbjct: 97  RLGLSQPSKVIDWLLEAAKDDVDKLPPLQFP 127

[Close]

BLAST of Sed0014252 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.8e-30
Identity = 92/215 (42.79%), Postives = 123/215 (57.21%), Query Frame = 0


Query: 35  SSSSSAATPWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQD 94
           SS S     W    +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ+
Sbjct: 10  SSLSLLTQRW---NNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQE 69

Query: 95  RLGLNQPSKVVDWLLNAAKDEIDELPPLPIPS---------ESLGLNYQSML-LAHTQAH 154
           RLGL+QPSKV+DWLL  AK+++D LPPL  P            LG ++  +  L  TQ  
Sbjct: 70  RLGLSQPSKVIDWLLEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGESFPGVFDLGRTQRE 129

Query: 155 PLRSEFK--INCDSGIGKEVEDAAVEQKQPKSNSNPSHPSSFSALLNNVSALPFGYHHWE 214
            L  E +  +N D      V D  ++     SNS  S+   F  + ++ S+  +   H +
Sbjct: 130 ALDLEKRKWVNLD-----HVFD-HIDHHNHFSNSIQSNKLYFPTITSSSSSYHYNLGHLQ 189

Query: 215 PSSTTNLPFFTSQAEDLHNFNNVNLSLPSPLSLST 238
            S        T      +N+NN NL+ P+  ++S+
Sbjct: 190 QSLLDQSGNVTVAFS--NNYNNNNLNPPAAETMSS 213

[Close]

BLAST of Sed0014252 vs. ExPASy Swiss-Prot
Match: Q93V43 (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26
Identity = 101/263 (38.40%), Postives = 130/263 (49.43%), Query Frame = 0


Query: 51  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 110
           RI+RVSRA GGKDRHSKV T +G RDRRVRLSVSTA+Q YDLQDRLG +QPSK V+WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 111 AAKDEIDELPPL-----PIPSESLGLNYQSMLLAHTQAHPL-RSEFKINCD-----SGIG 170
           AA+D I ELP L     P   E    N+Q+  L    A+ L +S    N D     SG+ 
Sbjct: 92  AAEDSISELPSLNNTHFPTDDE----NHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLS 151

Query: 171 ---KEVEDAAVEQKQPK----SNSNPSHPSSFSALLNNVSALPFGYHHWEPSSTTNLPFF 230
               E+ D A E+ + +    +     + +SF+ LLN+ S        W  S+ ++ P  
Sbjct: 152 LSRSELRDKARERARERTAKETKERDHNHTSFTDLLNSGSDPVNSNRQWMASAPSSSP-- 211

Query: 231 TSQAEDLHNFNNVNLSLPSPLSLSTGSQFMEFNHLHQNFLTNSNSLAHPLHSINQSAHVR 290
                 +  F+       S L L +G Q       H    TNS    HP  SI+   H  
Sbjct: 212 ------MEYFS-------SGLILGSGQQ------THFPISTNS----HPFSSISDHHHHH 265

Query: 291 PFH----FSMAPKFVTQDKNDNG 292
           P H    FS  P  +      NG
Sbjct: 272 PHHQHQEFSFVPDHLISPAESNG 265

[Close]

BLAST of Sed0014252 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-24
Identity = 85/221 (38.46%), Postives = 110/221 (49.77%), Query Frame = 0


Query: 51  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 110
           RI+RVSRA GGKDRHSKV T +GLRDRR+RLSV+TAIQ YDLQDRLG +QPSK V+WL+N
Sbjct: 40  RIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLIN 99

Query: 111 AAKDEIDELPPLPIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQK 170
           AA D I +LP L    + L  N      A +      S   ++     GK  E A     
Sbjct: 100 AASDSITDLPLLNTNFDHLDQNQNQTKSACSSGTSESSLLSLSRTEIRGKARERARERTA 159

Query: 171 QPKSNSNPSHPSSFSALLNNVSALPFGYHHWEPSS------TTNLPFFTSQAEDLHNFNN 230
           + +     +  SSF+ LL           +W   S         +P  +SQ    H F+ 
Sbjct: 160 KDRDKDLQNAHSSFTQLLTGGFDQQPSNRNWTGGSDCFNPVQLQIPNSSSQEPMNHPFSF 219

Query: 231 V---NLSLPSPLSLSTGSQFMEFNHLHQN----FLTNSNSL 259
           V   N  + S  S   G  +     L  N    FL N+N++
Sbjct: 220 VPDYNFGISSSSSAINGG-YSSRGTLQSNSQSLFLNNNNNI 259

[Close]

BLAST of Sed0014252 vs. ExPASy TrEMBL
Match: A0A6J1IZY4 (transcription factor TCP17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479977 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.8e-104
Identity = 227/306 (74.18%), Postives = 249/306 (81.37%), Query Frame = 0


Query: 1   MPVEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFG 60
           MP  KH ERH MI TNS  +EENSPPKLAA++++S++++ ATPWL+LKDPRIVRVSRAFG
Sbjct: 1   MPAGKHDERHTMI-TNS--KEENSPPKLAASSSSSAAAAVATPWLRLKDPRIVRVSRAFG 60

Query: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP 120
           GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELP
Sbjct: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELP 120

Query: 121 PLPIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSH 180
           PLPIPS SLGL+YQSML  HT AH  R EFKIN  SGI K   D   EQKQ KSNSN   
Sbjct: 121 PLPIPSASLGLHYQSMLPPHT-AH--RPEFKIN--SGIDKVEIDDDDEQKQHKSNSN--- 180

Query: 181 PSSFSALLNNVSALPFGYHHWEP-----SSTTNLPFFTSQAEDLHNFNNVNLSLPSPLSL 240
           PSSFSALLNNVSA PFG+ HW+P     SSTTNLPFFTSQAEDLHNFN+V     +PLSL
Sbjct: 181 PSSFSALLNNVSAPPFGF-HWDPSSSSSSSTTNLPFFTSQAEDLHNFNHV-----TPLSL 240

Query: 241 STGSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKNDNGDH 300
           STGSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV+QDKN+NGD 
Sbjct: 241 STGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVSQDKNNNGDP 288

[Close]

BLAST of Sed0014252 vs. ExPASy TrEMBL
Match: A0A6J1IX73 (transcription factor TCP17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479977 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.6e-103
Identity = 225/304 (74.01%), Postives = 248/304 (81.58%), Query Frame = 0


Query: 3   VEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFGGK 62
           + KH ERH MI TNS  +EENSPPKLAA++++S++++ ATPWL+LKDPRIVRVSRAFGGK
Sbjct: 1   MRKHDERHTMI-TNS--KEENSPPKLAASSSSSAAAAVATPWLRLKDPRIVRVSRAFGGK 60

Query: 63  DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPL 122
           DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELPPL
Sbjct: 61  DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPL 120

Query: 123 PIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSHPS 182
           PIPS SLGL+YQSML  HT AH  R EFKIN  SGI K   D   EQKQ KSNSN   PS
Sbjct: 121 PIPSASLGLHYQSMLPPHT-AH--RPEFKIN--SGIDKVEIDDDDEQKQHKSNSN---PS 180

Query: 183 SFSALLNNVSALPFGYHHWEP-----SSTTNLPFFTSQAEDLHNFNNVNLSLPSPLSLST 242
           SFSALLNNVSA PFG+ HW+P     SSTTNLPFFTSQAEDLHNFN+V     +PLSLST
Sbjct: 181 SFSALLNNVSAPPFGF-HWDPSSSSSSSTTNLPFFTSQAEDLHNFNHV-----TPLSLST 240

Query: 243 GSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKNDNGDHTP 300
           GSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV+QDKN+NGD   
Sbjct: 241 GSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVSQDKNNNGDPAH 286

[Close]

BLAST of Sed0014252 vs. ExPASy TrEMBL
Match: A0A6J1GWB2 (transcription factor TCP17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457473 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 6.3e-102
Identity = 230/315 (73.02%), Postives = 248/315 (78.73%), Query Frame = 0


Query: 1   MPVEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFG 60
           MP  KH ERH MI TNS  +EENSPPKL A  ++SSS++ ATPWL+LKDPRIVRVSRAFG
Sbjct: 1   MPAGKHDERHTMI-TNS--KEENSPPKLVA--SSSSSAALATPWLRLKDPRIVRVSRAFG 60

Query: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP 120
           GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELP
Sbjct: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELP 120

Query: 121 PLPIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSH 180
           PLPIPS SLGL+YQSML  H  AH  RSEFKIN  SGI K   D   EQKQ KSNSN   
Sbjct: 121 PLPIPSASLGLHYQSMLPPHI-AH--RSEFKIN--SGIDKVEIDDDDEQKQHKSNSN--- 180

Query: 181 PSSFSALLNNVSALPFGYHHWEP---------SSTTNLPFFTSQAEDLHNFNNVNLSLPS 240
           PSSFSALLNNVSA PFG+ HW+P         SSTTNLPFFTSQAEDLHNFN+V     +
Sbjct: 181 PSSFSALLNNVSAPPFGF-HWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNFNHV-----T 240

Query: 241 PLSLSTGSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKND 300
           PLSLSTGSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV Q KN+
Sbjct: 241 PLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVAQHKNN 294

Query: 301 NGDHTPNKDDHFCSE 305
           NGD   NK+D F S+
Sbjct: 301 NGD-PANKEDGFGSD 294

[Close]

BLAST of Sed0014252 vs. ExPASy TrEMBL
Match: A0A6J1GV58 (transcription factor TCP17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457473 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 9.1e-101
Identity = 228/313 (72.84%), Postives = 247/313 (78.91%), Query Frame = 0


Query: 3   VEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFGGK 62
           + KH ERH MI TNS  +EENSPPKL A  ++SSS++ ATPWL+LKDPRIVRVSRAFGGK
Sbjct: 1   MRKHDERHTMI-TNS--KEENSPPKLVA--SSSSSAALATPWLRLKDPRIVRVSRAFGGK 60

Query: 63  DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPL 122
           DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDEIDELPPL
Sbjct: 61  DRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPL 120

Query: 123 PIPSESLGLNYQSMLLAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPSHPS 182
           PIPS SLGL+YQSML  H  AH  RSEFKIN  SGI K   D   EQKQ KSNSN   PS
Sbjct: 121 PIPSASLGLHYQSMLPPHI-AH--RSEFKIN--SGIDKVEIDDDDEQKQHKSNSN---PS 180

Query: 183 SFSALLNNVSALPFGYHHWEP---------SSTTNLPFFTSQAEDLHNFNNVNLSLPSPL 242
           SFSALLNNVSA PFG+ HW+P         SSTTNLPFFTSQAEDLHNFN+V     +PL
Sbjct: 181 SFSALLNNVSAPPFGF-HWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNFNHV-----TPL 240

Query: 243 SLSTGSQFMEF-NHLHQN-FLTNSNSLAHPLHSINQSAHVRPFHFSMAPKFVTQDKNDNG 302
           SLSTGSQF+EF NHLHQN F+ NS +   P+HSI   A VRPFHFSMA KFV Q KN+NG
Sbjct: 241 SLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPA-VRPFHFSMATKFVAQHKNNNG 292

Query: 303 DHTPNKDDHFCSE 305
           D   NK+D F S+
Sbjct: 301 D-PANKEDGFGSD 292

[Close]

BLAST of Sed0014252 vs. ExPASy TrEMBL
Match: A0A0A0KVZ7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G132680 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.9e-98
Identity = 221/322 (68.63%), Postives = 244/322 (75.78%), Query Frame = 0


Query: 1   MPVEKHGERHKMISTNSEEEEENSPPKLAAATAASSSSSAATPWLKLKDPRIVRVSRAFG 60
           MP +KH ERH MI   + +EE + PPKL    AA SSSS+ATPWL+LKDPRIVRVSRAFG
Sbjct: 1   MPADKHDERHNMI--KNSKEENSPPPKL----AAGSSSSSATPWLRLKDPRIVRVSRAFG 60

Query: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP 120
           GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP
Sbjct: 61  GKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELP 120

Query: 121 PLPIPSESLGLNYQSML-LAHTQAHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSNSNPS 180
           PLPIPS SLGL+YQSM+    T  HP RSEFKI   +G+  E      EQKQ KSNSNPS
Sbjct: 121 PLPIPSASLGLHYQSMIPTTTTVVHPHRSEFKIIDKAGVEDE-----TEQKQHKSNSNPS 180

Query: 181 HP-SSFSALLNNVSALPFGYH--HWEPSSTT-----NLPFFTSQAED------LHNFNNV 240
           HP SSFSALLNNVSA PFG++  H  PSS++     NLPF TSQA D      LH FN++
Sbjct: 181 HPNSSFSALLNNVSAPPFGFYWDHNPPSSSSTTTNNNLPFLTSQAGDNNNNNNLHTFNHL 240

Query: 241 NLSL-PSPLSLSTGSQFMEFNHLHQNFLTNSNSLAHPLHSINQSAH--VRPFHFSMAPKF 300
           NLSL PSPLSLST SQF+EFNHLHQNF  N+NS     ++ N S H  VRPFHFSMA KF
Sbjct: 241 NLSLPPSPLSLSTASQFLEFNHLHQNFFINNNS-----NNNNPSFHPNVRPFHFSMATKF 300

Query: 301 VT-QDKNDNGDHTPNKDDHFCS 304
           +  QDKN+N    P+KD  F S
Sbjct: 301 LPHQDKNNNNVDPPSKDHGFAS 306

[Close]

BLAST of Sed0014252 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 155.6 bits (392), Expect = 6.3e-38
Identity = 104/239 (43.51%), Postives = 136/239 (56.90%), Query Frame = 0


Query: 9   RHKMISTNSEEEEENSPP-KLAAATAASSSSSAATPWLKLKDPRIVRVSRAFGGKDRHSK 68
           R + +  + EE E  +   K       +S SS+++ W+K KDPRIVRVSRAFGGKDRHSK
Sbjct: 21  REREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSK 80

Query: 69  VCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSE 128
           VCT+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+AAK+EIDELPPLPI  E
Sbjct: 81  VCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPE 140

Query: 129 SLGL--NYQSMLLAHTQ--AHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSN-----SNP 188
           +  +  ++QS L    +    P +  FKIN    + K    +  E  + K       +N 
Sbjct: 141 NFSIFNHHQSFLNLGQRPGQDPTQLGFKIN--GCVQKSTTTSREENDREKGENDVVYTNN 200

Query: 189 SHPSSFSALLNNVSALPFGYHHWEPSSTTNLPFFTSQAEDLHNFNNVNLSLPSPLSLST 238
            H  S+    N        +HH     +    + + Q   L  F +  L  P   S +T
Sbjct: 201 HHVGSYGTYHNLEH-----HHHHHQHLSLQADYHSHQLHSLVPFPSQILVCPMTTSPTT 252

[Close]

BLAST of Sed0014252 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-37
Identity = 113/279 (40.50%), Postives = 147/279 (52.69%), Query Frame = 0


Query: 9   RHKMISTNSEEEEENSPP-KLAAATAASSSSSAATPWLKLKDPRIVRVSRAFGGKDRHSK 68
           R + +  + EE E  +   K       +S SS+++ W+K KDPRIVRVSRAFGGKDRHSK
Sbjct: 21  REREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSK 80

Query: 69  VCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSE 128
           VCT+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+AAK+EIDELPPLPI  E
Sbjct: 81  VCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPE 140

Query: 129 SLGL--NYQSMLLAHTQ--AHPLRSEFKINCDSGIGKEVEDAAVEQKQPKSN-----SNP 188
           +  +  ++QS L    +    P +  FKIN    + K    +  E  + K       +N 
Sbjct: 141 NFSIFNHHQSFLNLGQRPGQDPTQLGFKIN--GCVQKSTTTSREENDREKGENDVVYTNN 200

Query: 189 SHPSSFSALLNNVSALPFGYHHWEPSSTTNLPFFTSQAEDLHNFNNVNLSLPS------- 248
            H  S+    N        +HH     +    + + Q   L  F +  L  P        
Sbjct: 201 HHVGSYGTYHNLEH-----HHHHHQHLSLQADYHSHQLHSLVPFPSQILVCPMTTSPTTT 260

Query: 249 ------PLSLSTGSQFME-------FNHLHQNFLTNSNS 258
                 P S S GS  ME        +H     + NS+S
Sbjct: 261 TIQSLFPSSSSAGSGTMETLDPRQMVSHFQMPLMGNSSS 292

[Close]

BLAST of Sed0014252 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 141.7 bits (356), Expect = 9.5e-34
Identity = 68/91 (74.73%), Postives = 79/91 (86.81%), Query Frame = 0


Query: 36  SSSSAATPWLK-LKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQD 95
           SS S++  W    ++PRIVRVSR FGGKDRHSKVCT+RGLRDRR+RLSV TAIQLYDLQD
Sbjct: 37  SSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQD 96

Query: 96  RLGLNQPSKVVDWLLNAAKDEIDELPPLPIP 126
           RLGL+QPSKV+DWLL AAKD++D+LPPL  P
Sbjct: 97  RLGLSQPSKVIDWLLEAAKDDVDKLPPLQFP 127

[Close]

BLAST of Sed0014252 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-31
Identity = 92/215 (42.79%), Postives = 123/215 (57.21%), Query Frame = 0


Query: 35  SSSSSAATPWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQD 94
           SS S     W    +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ+
Sbjct: 10  SSLSLLTQRW---NNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQE 69

Query: 95  RLGLNQPSKVVDWLLNAAKDEIDELPPLPIPS---------ESLGLNYQSML-LAHTQAH 154
           RLGL+QPSKV+DWLL  AK+++D LPPL  P            LG ++  +  L  TQ  
Sbjct: 70  RLGLSQPSKVIDWLLEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGESFPGVFDLGRTQRE 129

Query: 155 PLRSEFK--INCDSGIGKEVEDAAVEQKQPKSNSNPSHPSSFSALLNNVSALPFGYHHWE 214
            L  E +  +N D      V D  ++     SNS  S+   F  + ++ S+  +   H +
Sbjct: 130 ALDLEKRKWVNLD-----HVFD-HIDHHNHFSNSIQSNKLYFPTITSSSSSYHYNLGHLQ 189

Query: 215 PSSTTNLPFFTSQAEDLHNFNNVNLSLPSPLSLST 238
            S        T      +N+NN NL+ P+  ++S+
Sbjct: 190 QSLLDQSGNVTVAFS--NNYNNNNLNPPAAETMSS 213

[Close]

BLAST of Sed0014252 vs. TAIR 10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 )

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-27
Identity = 101/263 (38.40%), Postives = 130/263 (49.43%), Query Frame = 0


Query: 51  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 110
           RI+RVSRA GGKDRHSKV T +G RDRRVRLSVSTA+Q YDLQDRLG +QPSK V+WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 111 AAKDEIDELPPL-----PIPSESLGLNYQSMLLAHTQAHPL-RSEFKINCD-----SGIG 170
           AA+D I ELP L     P   E    N+Q+  L    A+ L +S    N D     SG+ 
Sbjct: 92  AAEDSISELPSLNNTHFPTDDE----NHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLS 151

Query: 171 ---KEVEDAAVEQKQPK----SNSNPSHPSSFSALLNNVSALPFGYHHWEPSSTTNLPFF 230
               E+ D A E+ + +    +     + +SF+ LLN+ S        W  S+ ++ P  
Sbjct: 152 LSRSELRDKARERARERTAKETKERDHNHTSFTDLLNSGSDPVNSNRQWMASAPSSSP-- 211

Query: 231 TSQAEDLHNFNNVNLSLPSPLSLSTGSQFMEFNHLHQNFLTNSNSLAHPLHSINQSAHVR 290
                 +  F+       S L L +G Q       H    TNS    HP  SI+   H  
Sbjct: 212 ------MEYFS-------SGLILGSGQQ------THFPISTNS----HPFSSISDHHHHH 265

Query: 291 PFH----FSMAPKFVTQDKNDNG 292
           P H    FS  P  +      NG
Sbjct: 272 PHHQHQEFSFVPDHLISPAESNG 265

The following BLAST results are available for this feature:

BLAST of Sed0014252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980679.1	3.7e-104	74.18	transcription factor TCP17-like isoform X1 [Cucurbita maxima]	[more]
XP_022980680.1	5.3e-103	74.01	transcription factor TCP17-like isoform X2 [Cucurbita maxima]	[more]
KAG6581736.1	5.8e-102	73.48	Transcription factor TCP13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023527017.1	1.3e-101	73.65	transcription factor TCP17-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022955449.1	1.3e-101	73.02	transcription factor TCP17-like isoform X1 [Cucurbita moschata] >KAG7011073.1 Tr...	[more]

BLAST of Sed0014252 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7W5	2.6e-36	40.50	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9FME3	1.3e-32	74.73	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9LEZ9	2.8e-30	42.79	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q93V43	1.4e-26	38.40	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]
Q9C758	2.3e-24	38.46	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]

BLAST of Sed0014252 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZY4	1.8e-104	74.18	transcription factor TCP17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1IX73	2.6e-103	74.01	transcription factor TCP17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GWB2	6.3e-102	73.02	transcription factor TCP17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GV58	9.1e-101	72.84	transcription factor TCP17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0KVZ7	1.9e-98	68.63	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G132680 PE=4 SV...	[more]

BLAST of Sed0014252 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02150.1	6.3e-38	43.51	plastid transcription factor 1	[more]
AT3G02150.2	1.8e-37	40.50	plastid transcription factor 1	[more]
AT5G60970.1	9.5e-34	74.73	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT5G08070.1	2.0e-31	42.79	TCP domain protein 17	[more]
AT4G18390.1	1.0e-27	38.40	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 61..163 e-value: 5.9E-28 score: 98.4
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 61..119 score: 30.671406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..304
None	No IPR available	PANTHER	PTHR31072:SF147	TRANSCRIPTION FACTOR TCP2-LIKE	coord: 14..292
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 14..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014252.1	Sed0014252.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding