Homology
BLAST of Sed0014227 vs. NCBI nr
Match:
XP_022979061.1 (multiple RNA-binding domain-containing protein 1-like [Cucurbita maxima] >XP_022979074.1 multiple RNA-binding domain-containing protein 1-like [Cucurbita maxima] >XP_022979082.1 multiple RNA-binding domain-containing protein 1-like [Cucurbita maxima])
HSP 1 Score: 1419.1 bits (3672), Expect = 0.0e+00
Identity = 738/843 (87.54%), Postives = 783/843 (92.88%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
MTETTSRICVKNLPKHIDD RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MTETTSRICVKNLPKHIDDHRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKE+K +KD +VE+D+S S LGS
Sbjct: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEEKGTKDKTEVENDKSMSLLGS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
K+EGDNLKL IQD+D K+QEFLQVTQPRINSKLWAND L+APE +GK KEK SQMK +
Sbjct: 121 KKEGDNLKLSIQDDDPKIQEFLQVTQPRINSKLWANDTLMAPE---DGKGKEKASQMKTV 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
++LELVNV+GDKAEE QTA KN AHDDK+SDMEYFKS++KKTWSDSETSD DN+DE
Sbjct: 181 GGRRLELVNVDGDKAEETQTALHKNPAHDDKISDMEYFKSRVKKTWSDSETSDVDNSDE- 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEM 300
DE ++K +EI DV + DSKL LKTK +E HSNH A++L+ EKSSSTLEDKKDEM
Sbjct: 241 ----DESMKKTLEIRDVPIVDSKLPLKTKAKEEGHSNHCDADILNREKSSSTLEDKKDEM 300
Query: 301 VESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
+ESGRLFVRNLPYAATEEELEEHF+KYGT+SEVHLVVDKDTRRSKGIAYILYTLPESAKR
Sbjct: 301 LESGRLFVRNLPYAATEEELEEHFRKYGTVSEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
Query: 361 ALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLK 420
ALEELDNSIFQGRLLHVMPAQLRK SEKPEE ILEGQRSKSFKQKREEERKASEASGN K
Sbjct: 361 ALEELDNSIFQGRLLHVMPAQLRKISEKPEENILEGQRSKSFKQKREEERKASEASGNTK 420
Query: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVN 480
AWNSLFMRPDTVVENIARKYGVSKGELLD EADDLAVRVALGETQVVAETK ALTNAGVN
Sbjct: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDGEADDLAVRVALGETQVVAETKNALTNAGVN 480
Query: 481 VASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALV 540
VASLEEFASG+ADGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILALV
Sbjct: 481 VASLEEFASGKADGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALV 540
Query: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILE 600
IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILS NP GNVKDEK+ +GDARR ILE
Sbjct: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSHNPTPGNVKDEKVGEGDARRVILE 600
Query: 601 QATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKG 660
QA EGISDVDFDPDRVESRSLFVKNLNFKTTDESLR+HFS +MKEG+I+SAKVKKH+KKG
Sbjct: 601 QAMEGISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSENMKEGRILSAKVKKHIKKG 660
Query: 661 QQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTK 720
Q VSMGFGFLEFDSVETAT VCSNLQGTVLDSHALILQMCHVK DD+GQRKVDKEKSSTK
Sbjct: 661 QHVSMGFGFLEFDSVETATRVCSNLQGTVLDSHALILQMCHVKKDDQGQRKVDKEKSSTK 720
Query: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
+LVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVE+VTKQEAQNAFQALSN
Sbjct: 721 ILVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEYVTKQEAQNAFQALSN 780
Query: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRKVADFDDEDSMKFQ 840
THLYGRHLVLERAKEGE+LEELRARTAAQFSNDHDKSQNP++SKKRK D +EDS KF
Sbjct: 781 THLYGRHLVLERAKEGETLEELRARTAAQFSNDHDKSQNPVLSKKRKQVDDFEEDSKKFL 835
Query: 841 RTD 844
RTD
Sbjct: 841 RTD 835
BLAST of Sed0014227 vs. NCBI nr
Match:
XP_022942645.1 (multiple RNA-binding domain-containing protein 1-like [Cucurbita moschata] >XP_022942646.1 multiple RNA-binding domain-containing protein 1-like [Cucurbita moschata] >XP_022942647.1 multiple RNA-binding domain-containing protein 1-like [Cucurbita moschata])
HSP 1 Score: 1418.3 bits (3670), Expect = 0.0e+00
Identity = 736/843 (87.31%), Postives = 783/843 (92.88%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
MTETTSRICVKNLPKHIDD RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MTETTSRICVKNLPKHIDDHRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKE+K +KD +VEDD+S S LGS
Sbjct: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEEKGTKDKTEVEDDKSKSLLGS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
K+EGDNLKL IQD+D K+QEFLQVTQPRINSKLWAND L APE +GK KEK S+MK +
Sbjct: 121 KKEGDNLKLRIQDDDPKIQEFLQVTQPRINSKLWANDTLTAPE---DGKSKEKASKMKTV 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
+++ELVNV+GDKAEE QTA KN AHDDK+SDMEYFKS++KKTWSDSETSD DN+DE
Sbjct: 181 GGRRMELVNVDGDKAEETQTALHKNPAHDDKISDMEYFKSRVKKTWSDSETSDVDNSDE- 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEM 300
DE I+KK+EI DV M DSKL LKTK +E HSNH A++L+ EKSSSTLEDKKDEM
Sbjct: 241 ----DESIKKKLEIRDVPMVDSKLPLKTKAKEEGHSNHCDADILNREKSSSTLEDKKDEM 300
Query: 301 VESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
+ESGRLFVRNLPYAATEEELEEHF++YGT+SEVHLVVDKDTRRSKGIAYILYT+PESAKR
Sbjct: 301 LESGRLFVRNLPYAATEEELEEHFRRYGTVSEVHLVVDKDTRRSKGIAYILYTVPESAKR 360
Query: 361 ALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLK 420
ALEELDNSIFQGRLLH+MPAQLRK SEKPEE ILEGQRSKSFKQKREEERKASEASGN K
Sbjct: 361 ALEELDNSIFQGRLLHIMPAQLRKISEKPEENILEGQRSKSFKQKREEERKASEASGNTK 420
Query: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVN 480
AWNSLFMRPDTVVENIARKYGVSKGELLD EADDLAVRVALGETQVVAETK ALTNAGVN
Sbjct: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDGEADDLAVRVALGETQVVAETKNALTNAGVN 480
Query: 481 VASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALV 540
VASLEEFASG+ADGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILALV
Sbjct: 481 VASLEEFASGKADGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALV 540
Query: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILE 600
IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILS NPM G+VKDEK+ +GDARR ILE
Sbjct: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSHNPMPGHVKDEKVGEGDARRVILE 600
Query: 601 QATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKG 660
QA EGISDVDFDPDRVESRSLFVKNLNFKTTDESLR+HFS +MKEG+I+SAKVKKH+KKG
Sbjct: 601 QAVEGISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSENMKEGRILSAKVKKHIKKG 660
Query: 661 QQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTK 720
Q VSMGFGFLEFDSVETAT VCSNLQGTVLDSHALILQMCHVK DD+GQRKVDKEKSSTK
Sbjct: 661 QHVSMGFGFLEFDSVETATRVCSNLQGTVLDSHALILQMCHVKKDDQGQRKVDKEKSSTK 720
Query: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
+LVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVE+VTKQEAQNAFQALSN
Sbjct: 721 ILVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEYVTKQEAQNAFQALSN 780
Query: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRKVADFDDEDSMKFQ 840
THLYGRHLVLERAKEGE+LEELRARTAAQFSND DKSQNP++SKKRK D +EDS KF
Sbjct: 781 THLYGRHLVLERAKEGETLEELRARTAAQFSNDRDKSQNPVLSKKRKQVDDFEEDSKKFL 835
Query: 841 RTD 844
RTD
Sbjct: 841 RTD 835
BLAST of Sed0014227 vs. NCBI nr
Match:
XP_038894962.1 (multiple RNA-binding domain-containing protein 1 [Benincasa hispida])
HSP 1 Score: 1417.9 bits (3669), Expect = 0.0e+00
Identity = 735/840 (87.50%), Postives = 786/840 (93.57%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
MT++TSRICVKNLPK+IDD+RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MTDSTSRICVKNLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
EAIRYFNKSF+NTHRIACE AWKVGDPKIPRPWSKHSK KK +KD +KVEDD+S S LGS
Sbjct: 61 EAIRYFNKSFINTHRIACESAWKVGDPKIPRPWSKHSKAKKGTKDEMKVEDDKSLSSLGS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
KEEGDNLKL IQD+D K+QEFL VTQPRINSKLWANDIL+APE QNGK KEKPSQMK +
Sbjct: 121 KEEGDNLKLSIQDDDPKIQEFLHVTQPRINSKLWANDILMAPEADQNGKGKEKPSQMKKI 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
D ++LELVNV+GDKAEE QT+ KNSAHDDK+SDM +F+S+ K WSDSETSD+DNNDED
Sbjct: 181 DRERLELVNVDGDKAEEKQTSLLKNSAHDDKISDMVHFESRATKNWSDSETSDNDNNDED 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHY--VAEVLSVEKSSSTLEDKKD 300
+N+DE I+KK+E ++VQM +SK L++K +E DHSNH+ VA+VL +EKSSSTLEDKKD
Sbjct: 241 AQNEDESIKKKLEKKNVQMVNSKSPLESKAKEEDHSNHWDEVADVLHMEKSSSTLEDKKD 300
Query: 301 EMVESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESA 360
EM+ESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESA
Sbjct: 301 EMLESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESA 360
Query: 361 KRALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGN 420
KRALEELDNSIFQGRLLHVMPAQLRKT EKPE ILEGQRSKSFKQKREEERK+SEASGN
Sbjct: 361 KRALEELDNSIFQGRLLHVMPAQLRKTVEKPEANILEGQRSKSFKQKREEERKSSEASGN 420
Query: 421 LKAWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAG 480
+AWNSLFMRPDTVVENIARKYGVSKGELLD EADDLAVRVALGETQVVAETKKALTNAG
Sbjct: 421 TRAWNSLFMRPDTVVENIARKYGVSKGELLDGEADDLAVRVALGETQVVAETKKALTNAG 480
Query: 481 VNVASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILA 540
VNVASLEEFASG+ADGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILA
Sbjct: 481 VNVASLEEFASGKADGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILA 540
Query: 541 LVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAI 600
LVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEK+++GDARR I
Sbjct: 541 LVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKVAEGDARRVI 600
Query: 601 LEQATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVK 660
L+QA E ISDVD DPDRVESRSLFVKNLNFKTTDESLR HFS HMKEG+I+SAKVKKH+K
Sbjct: 601 LQQAVEEISDVDLDPDRVESRSLFVKNLNFKTTDESLRNHFSEHMKEGRILSAKVKKHIK 660
Query: 661 KGQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSS 720
KGQ VSMGFGFLEFDSVET+TSVCSNLQGTVLD HALILQ C+VK DD+GQRKVDKEKSS
Sbjct: 661 KGQHVSMGFGFLEFDSVETSTSVCSNLQGTVLDGHALILQTCNVKKDDQGQRKVDKEKSS 720
Query: 721 TKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQAL 780
TKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQAL
Sbjct: 721 TKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQAL 780
Query: 781 SNTHLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRKVADFDDEDSMK 839
SNTHLYGRHLVLERA+EGESLEELRARTAAQFSND DKSQNPI+SKKRK DED MK
Sbjct: 781 SNTHLYGRHLVLERAREGESLEELRARTAAQFSNDQDKSQNPILSKKRKQMTDFDEDEMK 840
BLAST of Sed0014227 vs. NCBI nr
Match:
XP_023525617.1 (multiple RNA-binding domain-containing protein 1 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1414.4 bits (3660), Expect = 0.0e+00
Identity = 734/843 (87.07%), Postives = 781/843 (92.65%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
MTETTSRICVKNLPKHIDD RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MTETTSRICVKNLPKHIDDHRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKE+K +KD +VEDD+S S L S
Sbjct: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEEKGTKDKTEVEDDKSISLLVS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
K+EGDNLKL IQD+D K+QEFLQVTQPRINSKLWAND L APE +GK KEK S+MK +
Sbjct: 121 KKEGDNLKLSIQDDDPKIQEFLQVTQPRINSKLWANDTLTAPE---DGKSKEKASKMKTV 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
+++ELVNV+GDKAEE QTA KN AHDDK+SDMEYFKS++KKTWSDSE SD DN+DE
Sbjct: 181 GGRRMELVNVDGDKAEETQTALHKNPAHDDKISDMEYFKSRVKKTWSDSEASDVDNSDE- 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEM 300
DE I+KK+EI DV M DSKL LKTK +E HSNH A++L+ EKSSSTLEDKKDEM
Sbjct: 241 ----DESIKKKLEIRDVPMVDSKLPLKTKAKEEGHSNHCDADILNREKSSSTLEDKKDEM 300
Query: 301 VESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
+ESGRLFVRNLPYAATEEELEEHF++YGT+SEVHLVVDKDTRRSKGIAYILYT+PESAKR
Sbjct: 301 LESGRLFVRNLPYAATEEELEEHFRRYGTVSEVHLVVDKDTRRSKGIAYILYTVPESAKR 360
Query: 361 ALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLK 420
ALEELDNSIFQGRLLH+MPAQLRK SEKPEE ILEGQRSKSFKQKREEERKASEASGN K
Sbjct: 361 ALEELDNSIFQGRLLHIMPAQLRKISEKPEENILEGQRSKSFKQKREEERKASEASGNTK 420
Query: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVN 480
AWNSLFMRPDTVVENIARKYGVSKGELLD EADDLAVRVALGETQVVAETK ALTNAGVN
Sbjct: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDGEADDLAVRVALGETQVVAETKNALTNAGVN 480
Query: 481 VASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALV 540
VASLEEFASG+ADGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILALV
Sbjct: 481 VASLEEFASGKADGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALV 540
Query: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILE 600
IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILS NP GNVKDEK+ +GDARR ILE
Sbjct: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSHNPTPGNVKDEKVGEGDARRVILE 600
Query: 601 QATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKG 660
QA EGISDVDFDPDRVESRSLFVKNLNFKTTDESLR+HFS +MKEG+I+SAKVKKH+KKG
Sbjct: 601 QAVEGISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSENMKEGRILSAKVKKHIKKG 660
Query: 661 QQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTK 720
Q VSMGFGFLEFDSVETAT VCSNLQGTVLDSHALILQMCH+K DD+GQRKVDKEKSSTK
Sbjct: 661 QHVSMGFGFLEFDSVETATRVCSNLQGTVLDSHALILQMCHLKKDDQGQRKVDKEKSSTK 720
Query: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
+LVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVE+VTKQEAQNAFQALSN
Sbjct: 721 ILVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEYVTKQEAQNAFQALSN 780
Query: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRKVADFDDEDSMKFQ 840
THLYGRHLVLERAKEGE+LEELRARTAAQFSNDHDKSQNP++SKKRK D +EDS KF
Sbjct: 781 THLYGRHLVLERAKEGETLEELRARTAAQFSNDHDKSQNPVLSKKRKQVDDFEEDSKKFL 835
Query: 841 RTD 844
RTD
Sbjct: 841 RTD 835
BLAST of Sed0014227 vs. NCBI nr
Match:
KAG7031177.1 (MRD1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1408.7 bits (3645), Expect = 0.0e+00
Identity = 731/838 (87.23%), Postives = 778/838 (92.84%), Query Frame = 0
Query: 6 SRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
SRICVKNLPKHIDD RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY
Sbjct: 11 SRICVKNLPKHIDDHRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 70
Query: 66 FNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGSKEEGD 125
FNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKE+K +KD +VEDD+S S LGSK+EGD
Sbjct: 71 FNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEEKGTKDKTEVEDDKSKSLLGSKKEGD 130
Query: 126 NLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNMDVKKL 185
NLKL IQD+D K+QEFLQVTQPRINSKLWAND L APE +GK KEK S+MK + +++
Sbjct: 131 NLKLRIQDDDPKIQEFLQVTQPRINSKLWANDTLTAPE---DGKSKEKASKMKTVGGRRM 190
Query: 186 ELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDEDVKNKD 245
ELVNV+GDKAEE QTA KN AHDDK+SDMEYFKS++KKTWSDSETSD DN+DE D
Sbjct: 191 ELVNVDGDKAEETQTALHKNPAHDDKISDMEYFKSRVKKTWSDSETSDVDNSDE-----D 250
Query: 246 EFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEMVESGR 305
E I+KK+EI DV M DSKL LKTK +E HSNH A++L+ EKSSSTLEDKKDEM+ESGR
Sbjct: 251 ESIKKKLEIRDVPMVDSKLPLKTKAKEEGHSNHCDADILNREKSSSTLEDKKDEMLESGR 310
Query: 306 LFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKRALEEL 365
LFVRNLPYAATEEELEEHF++YGT+SEVHLVVDKDTRRSKGIAYILYT+PESAKRALEEL
Sbjct: 311 LFVRNLPYAATEEELEEHFRRYGTVSEVHLVVDKDTRRSKGIAYILYTVPESAKRALEEL 370
Query: 366 DNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLKAWNSL 425
DNSIFQGRLLH+MPAQLRK SEKPEE ILEGQRSKSFKQKREEERKASEASGN KAWNSL
Sbjct: 371 DNSIFQGRLLHIMPAQLRKISEKPEENILEGQRSKSFKQKREEERKASEASGNTKAWNSL 430
Query: 426 FMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVNVASLE 485
FMRPDTVVENIARKYGVSKGELLD EADDLAVRVALGETQVVAETK ALTNAGVNVASLE
Sbjct: 431 FMRPDTVVENIARKYGVSKGELLDGEADDLAVRVALGETQVVAETKNALTNAGVNVASLE 490
Query: 486 EFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALVIFLEP 545
EFASG+ADGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILALVIFLEP
Sbjct: 491 EFASGKADGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALVIFLEP 550
Query: 546 SVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILEQATEG 605
SVARAAFKGLAYKRYKDAPLYLEWAPDNILS NPM G+VKDEK+ +GDARR ILEQA EG
Sbjct: 551 SVARAAFKGLAYKRYKDAPLYLEWAPDNILSHNPMPGHVKDEKVGEGDARRVILEQAVEG 610
Query: 606 ISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKGQQVSM 665
ISDVDFDPDRVESRSLFVKNLNFKTTDESLR+HFS +MKEG+I+SAKVKKH+KKGQ VSM
Sbjct: 611 ISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSENMKEGRILSAKVKKHIKKGQHVSM 670
Query: 666 GFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTKLLVRN 725
GFGFLEFDSVETAT VCSNLQGTVLDSHALILQMCHVK DD+GQRKVDKEKSSTK+LVRN
Sbjct: 671 GFGFLEFDSVETATRVCSNLQGTVLDSHALILQMCHVKKDDQGQRKVDKEKSSTKILVRN 730
Query: 726 VAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSNTHLYG 785
VAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVE+VTKQEAQNAFQALSNTHLYG
Sbjct: 731 VAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEYVTKQEAQNAFQALSNTHLYG 790
Query: 786 RHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRKVADFDDEDSMKFQRTD 844
RHLVLERAKEGE+LEELRARTAAQFSND DKSQNP++SKKRK D +EDS KF RTD
Sbjct: 791 RHLVLERAKEGETLEELRARTAAQFSNDRDKSQNPVLSKKRKQVDDFEEDSKKFLRTD 840
BLAST of Sed0014227 vs. ExPASy Swiss-Prot
Match:
Q9Y4C8 (Probable RNA-binding protein 19 OS=Homo sapiens OX=9606 GN=RBM19 PE=1 SV=3)
HSP 1 Score: 462.2 bits (1188), Expect = 1.2e-128
Identity = 345/983 (35.10%), Postives = 508/983 (51.68%), Query Frame = 0
Query: 6 SRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
SR+ VKNLP + ++R R LF+ G +TD L TKDGK R+F FIGF++E EAQ+A ++
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 66 FNKSFLNTHRIACEIAWKVGDPKIPRPWSKH----SKEKKESKDGIKVE---DDRSSSFL 125
FNKSF++T RI E GDP PR WSKH S+ K+ KD E D++
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 126 GSKEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKP-SQM 185
G E+ LK D + QEFL V Q R + WAND L A+ K K KP S
Sbjct: 122 GQLEK---LK-----EDTEFQEFLSVHQRRAQAATWANDGL----DAEPSKGKSKPASDY 181
Query: 186 KNMDVKKLELVNVEGDKAE-EMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDN 245
N D + EG + E + + +A +LSDM+Y KSKM K S S + ++++
Sbjct: 182 LNFDSDSGQESEEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEES 241
Query: 246 NDEDVKNKDEFIEKKMEIED----VQMKDSK----------------------------- 305
DE V + DE E + E +Q +DSK
Sbjct: 242 EDEAV-HCDEGSEAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQK 301
Query: 306 -----------------------------LSLKTKVEENDHSN------------HYVAE 365
+ ++ N H N V +
Sbjct: 302 EPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQ 361
Query: 366 VLSV--------------EKSSSTLE------------------DKKDEMVESGRLFVRN 425
L EK+ T + ++++++ ESGRLFVRN
Sbjct: 362 ALKCNREYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRN 421
Query: 426 LPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKRALEELDNSIF 485
LPY +TEE+LE+ F KYG +SE+H +D T++ KG A+I + PE A +A E+D +F
Sbjct: 422 LPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVF 481
Query: 486 QGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLKAWNSLFMRPD 545
QGR+LHV+P+ ++K + + + S S+K+K+E + KA+ AS + WN+LFM P+
Sbjct: 482 QGRMLHVLPSTIKKEASEDASAL----GSSSYKKKKEAQDKANSASSH--NWNTLFMGPN 541
Query: 546 TVVENIARKYGVSKGELLDREA-DDLAVRVALGETQVVAETKKALTNAGVNVASLEEFAS 605
V + IA+KY +K ++ D E +AVRVALGETQ+V E ++ L + GV SL+ F+
Sbjct: 542 AVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLIDNGV---SLDSFSQ 601
Query: 606 GEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALVIFLEPSVAR 665
A+ RS ++LVKNLP G+ +L FG FGSL +++LP I A+V FLEP AR
Sbjct: 602 AAAE---RSKTVILVKNLPAGTLAAQLQETFGHFGSLGRVLLPEGGITAIVEFLEPLEAR 661
Query: 666 AAFKGLAYKRYKDAPLYLEWAPDNILSQN-PMAGNVKD-------------EKISDG--- 725
AF+ LAY ++ PLYLEWAP + S P ++D E + DG
Sbjct: 662 KAFRHLAYSKFHHVPLYLEWAPVGVFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETP 721
Query: 726 ----------DARRAILEQATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAH 785
D A +E+ E + + + + + +LF+KNLNF TT+E L+E FS
Sbjct: 722 EDENPTEEGADNSSAKMEEEEE---EEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFS-- 781
Query: 786 MKEGKIMSAKV-KKHVKKGQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCH 837
K G + S + KK K G +SMGFGF+E+ E A LQG V+D H L +++
Sbjct: 782 -KVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISE 841
BLAST of Sed0014227 vs. ExPASy Swiss-Prot
Match:
Q54PB2 (Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium discoideum OX=44689 GN=mrd1 PE=3 SV=1)
HSP 1 Score: 460.7 bits (1184), Expect = 3.6e-128
Identity = 319/907 (35.17%), Postives = 502/907 (55.35%), Query Frame = 0
Query: 4 TTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAI 63
+ +RICVK LPKH+ D R + F + G +TD K+++ KDGKSR F FIGF TE A+ A+
Sbjct: 2 SNTRICVKQLPKHLTDKRFKEHFEKFGTVTDAKIIK-KDGKSRLFGFIGFSTEQSAKNAL 61
Query: 64 RYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHS-----------KEKKESKDGIKVEDD 123
N +F++T +I E A + RPWSK+S EK++ K +K + D
Sbjct: 62 S-LNGTFIDTSKIVVETATVASETTENRPWSKYSIGSSSNKRLTEMEKEKEKKELKRKQD 121
Query: 124 R---SSSFLGSKEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDIL---------- 183
+ S+ K ++L +ND + QEFL + P+ N K+W ND
Sbjct: 122 KLEQQSNKKQKKSHTNSLLDAELENDPEYQEFLNLVAPQANRKVWENDDKEIGKINRGEE 181
Query: 184 VAPEGAQN------------GKVKEKPSQMKNMDVKKLELVNV--EGDKAEEMQTASRKN 243
EG +N GK K + KN D+ E + E D E+M TA +K
Sbjct: 182 EGEEGEENDNQVEDGKLPFSGKKKIELDHGKNKDLLVFEDADASDEEDLYEDMPTAPKKQ 241
Query: 244 S--------------AHDDKLSDMEY---FKSK----MKKTWSDSETSDDDNNDEDVKNK 303
+ HD +SD+++ F+S ++K S ++++ +EDV NK
Sbjct: 242 NKKDDVDSIINEKKKKHDSSVSDLDWLSKFRSNNDEIIEKNQSIVYRDEEESEEEDVNNK 301
Query: 304 DEFIEKKMEIED--VQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEMV- 363
E + KM+I+D K+ K K ++ND+ + K K+DE V
Sbjct: 302 -ENKKDKMKIDDNKENKKEKKKDKKKNKKDNDNDGDDDESKIKPIKYFEHDYTKEDEDVG 361
Query: 364 ESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKRA 423
ESGR+FVRNL Y+ EE+LE+ F K+G ISE+H+ +D D+++SKGIA+ILY +PE+A +A
Sbjct: 362 ESGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQA 421
Query: 424 LEELDNSIFQGRLLHVMP--AQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNL 483
L ++D +FQGRL+HV+P A K + ++ G S K E+E+K SG+
Sbjct: 422 LNDMDGKVFQGRLIHVLPGKAAPAKQFSENKDNNNNGAEGGSSSFKAEKEQKQKTTSGST 481
Query: 484 KAWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGV 543
WN+LFMR D +V ++A +Y +++G+LLD DLAVR+ L ET V+ ETKK L + GV
Sbjct: 482 HNWNALFMRSDAIVSSLAERYKMTQGQLLDPNQMDLAVRMTLMETHVINETKKFLEDQGV 541
Query: 544 NVASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILAL 603
+ + G KRSN +LLVKN+P+ + E EL +F KFG L +++L P + +AL
Sbjct: 542 IIQDIGN------KGSKRSNTVLLVKNIPFKTQEHELHELFSKFGELSRVVLSPARTIAL 601
Query: 604 VIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILS----QNPMAGNVKDEKISDGDAR 663
+ ++ P+ A+ FK LAY ++ PLYLEWAP+ + + + K EK SD
Sbjct: 602 IEYIHPNEAKVGFKNLAYSKFHHVPLYLEWAPEGVFKLPAPPKEIKKSEKSEKSSDSSND 661
Query: 664 RAILEQATEGISDVDFDPDRVESRSLFV--KNLNFKTTDESLREHFSAHMKEGKIMSAKV 723
+ +E T+ + ++ + FV KNLN+KTT+E+L F + +K+ ++
Sbjct: 662 KKEVESTTKTAATTTTTKKGTDNNTQFVYIKNLNWKTTNETLVGKFKS-LKDYVNVNIAT 721
Query: 724 KKHVKK-GQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKV 783
K + K +++ GFGF+EF S + A L G+ +D + + L++ KN+ Q ++
Sbjct: 722 KANPKNPSERLPCGFGFIEFSSKQGAYECIKKLNGSSIDGYEISLKLSD-KNETNVQ-EI 781
Query: 784 DK-------------------EKSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMK 820
+K K S+K++++N+ FE+T K++R+LF+ YG+I+S+R+P K
Sbjct: 782 NKRRELPENSKQSIKSNGGQPNKPSSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIPKK 841
BLAST of Sed0014227 vs. ExPASy Swiss-Prot
Match:
Q8R3C6 (Probable RNA-binding protein 19 OS=Mus musculus OX=10090 GN=Rbm19 PE=1 SV=1)
HSP 1 Score: 444.5 bits (1142), Expect = 2.7e-123
Identity = 324/980 (33.06%), Postives = 497/980 (50.71%), Query Frame = 0
Query: 6 SRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
SR+ VKNLP + ++R R LF+ G +TD L TKDGK R+F FIGF++E EAQ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALNH 61
Query: 66 FNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGSKEEGD 125
F++SF++T RI E GDP PR WSKH+++ + K S + S + D
Sbjct: 62 FHRSFIDTTRITVEFCKSFGDPSKPRAWSKHAQKSSQPK-------QPSQDSVPSDTKKD 121
Query: 126 NLKLGIQD-----NDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 185
K G D D K QEFL + Q R WAND L A+ K K K S
Sbjct: 122 KKKKGPSDLEKLKEDAKFQEFLSIHQKRTQVATWANDAL----EAKLPKAKTKASS---- 181
Query: 186 DVKKLELVNVEGDKAEEMQTASRKNSAHDD---------------KLSDMEYFKSKMKKT 245
+ +N + D + S + A +D +LSDM+Y KSKM +
Sbjct: 182 -----DYLNFDSDSNSDSGQESEEEPAREDPEEEQGLQPKAAVQKELSDMDYLKSKMVRA 241
Query: 246 WSDSETSDDDNNDEDVKNKDEFIEKKME------------------------------IE 305
SE D+++++++ N +E E++ E +E
Sbjct: 242 EVSSEDEDEEDSEDEAVNCEEGSEEEEEEGSPASPAKQGGVSRGAVPGVLRPQEAAGKVE 301
Query: 306 ------------DVQMKDSKLSLKTK---------------VEENDHSNH--YVAEVLSV 365
V+++ + ++ K + N H N YV LS
Sbjct: 302 KPVSQKEPTTPYTVKLRGAPFNVTEKNVIEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSS 361
Query: 366 E----------------------------------KSSSTLE-------DKKDEMVESGR 425
E KS++ + ++++++ +SGR
Sbjct: 362 EEEVKKALKCNRDYMGGRYIEVFREKQAPTARGPPKSTTPWQGRTLGENEEEEDLADSGR 421
Query: 426 LFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKRALEEL 485
LFVRNL Y ++EE+LE+ F YG +SE+H +D T++ KG A++ + PE A +A E+
Sbjct: 422 LFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEV 481
Query: 486 DNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLKAWNSL 545
D +FQGR+LHV+P+ ++K E +E G S+K+K+E KA+ +S + WN+L
Sbjct: 482 DGQVFQGRMLHVLPSTIKK--EASQEANAPG---SSYKKKKEAMDKANSSSSH--NWNTL 541
Query: 546 FMRPDTVVENIARKYGVSKGELLDREA-DDLAVRVALGETQVVAETKKALTNAGVNVASL 605
FM P+ V + IA+KY +K ++ D E +AVRVALGETQ+V E + L + GV + S
Sbjct: 542 FMGPNAVADAIAQKYNATKSQVFDHETRGSVAVRVALGETQLVQEVRSFLIDNGVCLDSF 601
Query: 606 EEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALVIFLE 665
+ A+ +RS ++L KNLP G+ E+ F +FGSL +++LP I A+V FLE
Sbjct: 602 SQAAA------ERSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLE 661
Query: 666 PSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPM-----------AGNVKDEKISDGD 725
P AR AF+ LAY ++ PLYLEWAP + P V+ E + D +
Sbjct: 662 PLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKKDSQHEQPAEKAEVEQETVLDPE 721
Query: 726 ARRAILEQATEGISDVDFDPDRVESR--------SLFVKNLNFKTTDESLREHFSAHMKE 785
+A +E A ++ + + E +LF+KNLNF TT+E+L+ FS K
Sbjct: 722 GEKASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNFSTTEETLKGVFS---KV 781
Query: 786 GKIMSAKV-KKHVKKGQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKN 837
G I S + KK K G +SMGFGF+E+ E A LQG +D H L +++
Sbjct: 782 GAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERAT 841
BLAST of Sed0014227 vs. ExPASy Swiss-Prot
Match:
Q4PC17 (Multiple RNA-binding domain-containing protein 1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=MRD1 PE=3 SV=1)
HSP 1 Score: 427.6 bits (1098), Expect = 3.4e-118
Identity = 302/875 (34.51%), Postives = 477/875 (54.51%), Query Frame = 0
Query: 6 SRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
SR+ V+ LP ++ D RLR FS+KG +TDVKLMR DG SR+F F+G+R+E EAQ+A+ Y
Sbjct: 2 SRLIVRGLPSYLTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEQEAQQALDY 61
Query: 66 FNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESK--------------DGIKVED 125
FN++F++T RI+ E+A K+GD ++ H +E++ ++ D K +
Sbjct: 62 FNRTFIDTSRISIELAKKIGDEEL-----VHQREERRNRRNAGAGPEGSASTSDARKRKA 121
Query: 126 DRSSSFLGSKEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWAND---------ILVAP 185
D+S + +EEG K + + +EF+ V QP+ K W N+ +VAP
Sbjct: 122 DKSDT---QQEEGSGKKKPKKGGAISFEEFMSVMQPKAKRKAWQNEDALPEQTMQDIVAP 181
Query: 186 EGAQNGKVKEKPSQMKNMDVKKLELVNVEGDKAE----EMQTASRKNSAHDDKLSDMEYF 245
E A K K +K D E A+ +T +A+D L+D EY
Sbjct: 182 EEAIQKKAARK--ALKKADAAAAATATAESTAAQPDSGREETPEPDAAANDVGLTDEEYM 241
Query: 246 KSKMK-KTWSDSETSDD-------DNNDEDVKNKDEFIEKKMEIEDVQMKDSKLSLKTKV 305
+ +MK + +D +T + + +D + + D + E ED + D + K
Sbjct: 242 RLRMKHRVGTDLDTLEQSSSGPEFEQSDNEKDDDDAAADSDPESEDEPIHDQ--GFECKQ 301
Query: 306 EENDHSNHYVAEVLSVEKSSSTLEDKK--DEMVESGRLFVRNLPYAATEEELEEHFQKYG 365
E AE +D+K D+++ESGRLF+RNLP+AA+ +E+ F+ +G
Sbjct: 302 AEMQRKAQQAAE-----------KDQKLVDQIMESGRLFIRNLPFAASGDEILAFFESFG 361
Query: 366 TISEVHLVVDKDTRRSKGIAYILYTLPESAKRALEELDNSIFQGRLLHVMPA----QLRK 425
T+ +VH+ +DK T+ SKG+A++ ++ P A A D S FQGRLLH++PA L +
Sbjct: 362 TVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRAKDGSTFQGRLLHLLPAVNKDALAE 421
Query: 426 TSEKPEETILEGQRSKSFKQKREEERKASEASGNLKAWNSLFMRPDTVVENIARKYGVSK 485
T K T+ KQ R E++K +A+ + W+ L+M D V +IA + GV+K
Sbjct: 422 TGSKKTATL---------KQARAEQKK-QDATKDFN-WSMLYMSSDAVASSIADRLGVNK 481
Query: 486 GELL----DREADDLAVRVALGETQVVAETKKALTNAGVNVASLEEFASGEADGHKRSNH 545
++L + AD+ AVR+AL ET+++ ETK+ L G+NV + + A G RS+
Sbjct: 482 SDILNPGANGGADNAAVRLALAETRIIQETKEFLAQQGINVDAFQG-AKG-----PRSDT 541
Query: 546 ILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALVIFLEPSVARAAFKGLAYKRY 605
+LVKN+PYG+S E+ +FG+ G +DK+++PP+ +A+V + AR AF+ +AYKR+
Sbjct: 542 TILVKNIPYGTSAEEVEKLFGEHGEVDKVLIPPSGTIAVVEMPVVNEARLAFRAIAYKRF 601
Query: 606 KDAPLYLEWAPDNILSQNPMAGN-VKDEKISDGDARRAILEQATEGISDVDFDPDRVESR 665
K LYLE AP +L+Q+ + VK I + +G + + V+
Sbjct: 602 KGGILYLEKAPVGLLTQHKVGEKVVKQAPIVGKSIDSSNPSVDLDGPAGAGAGDEAVDGA 661
Query: 666 SLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKK-GQQVSMGFGFLEFDSVETA 725
+L+VKNL+F TTDE L F + + + K ++ G ++SMG+GF+ F S++ A
Sbjct: 662 TLYVKNLSFSTTDERLTAFFHG-LSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAA 721
Query: 726 TSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTKLLVRNVAFEATGKDLRQL 785
+ + G VLD+H L++ +N + + STK+L++N+ FEAT +D+R L
Sbjct: 722 RTAQKAMDGKVLDAHTLVVTFAR-RNAEASTTSI-SSGGSTKILIKNLPFEATKRDIRDL 781
Query: 786 FSPYGQIKSLRLPMKF-GKHRGFAFVEFVTKQEAQNAFQALSNTHLYGRHLVLERAKEGE 829
FS GQ+KS+RLP KF RGF FVE+ T +EAQ+A +AL +THL GRHLVL+ +
Sbjct: 782 FSSQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAMEALKHTHLLGRHLVLQWSHLAS 833
BLAST of Sed0014227 vs. ExPASy Swiss-Prot
Match:
Q5AJS6 (Multiple RNA-binding domain-containing protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MRD1 PE=3 SV=2)
HSP 1 Score: 419.1 bits (1076), Expect = 1.2e-115
Identity = 282/866 (32.56%), Postives = 463/866 (53.46%), Query Frame = 0
Query: 6 SRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
SR+ VK LPK+ +++LR FS++G++TDVKLM+ ++G+SR+FAFIG+++ A+ A++Y
Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKY 61
Query: 66 FNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEK----KESKDGIKVEDDRSSSFLGSK 125
FNKSF++T RI E A DP +P + + K + K+ ++ + ++ R+ +
Sbjct: 62 FNKSFIDTARIEVEFAKTFSDPTVPLSFKEKRKREEQKLKDEQERLLEQELRAQAKKQKT 121
Query: 126 EEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKN-- 185
+ + I N K++E+++V +P K WAND + G + + E N
Sbjct: 122 KSTSEIDDEIASNP-KLREYMEVMKPSHQVKSWANDTIADGSGGPSVQDLENALNGNNES 181
Query: 186 -MDVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSD----- 245
+D +E+VN D A DD+ +D + +K + + E +
Sbjct: 182 PVDKSNIEVVNTVED-------------ASDDEYNDFKELSNKHGENEDEEEEEEMMSLG 241
Query: 246 DDNNDEDVKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTL 305
D +E+ K+K+E E E++ + S T+++EN V EV V + +
Sbjct: 242 DLPTNEENKDKNESGENLAANENISDLEWLKSRSTRIKENGEVPEIVPEVKEVNEVTEAT 301
Query: 306 E--DKKDEMV----------ESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDT 365
+ D + EM E+GRLF+RN+ Y A+EE+ F +YG + EVH+ +D T
Sbjct: 302 QQSDNEPEMTPEEQIAHKIEETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRT 361
Query: 366 RRSKGIAYILYTLPESAKRALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKS 425
+SKG Y+ + E A RA LD IFQGRLLH++PA +K E + ++
Sbjct: 362 GKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPADKKKDHRLDEFDL----KNLP 421
Query: 426 FKQKREEERKASEASGNLKAWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVAL 485
K++RE ++KA A +WNSL+M D V+E++A K GV+K +L+D E AV+ AL
Sbjct: 422 LKKQRELKKKAQAAKTQF-SWNSLYMNSDAVLESVASKLGVTKSQLIDPENSSSAVKQAL 481
Query: 486 GETQVVAETKKALTNAGVNVASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFG 545
E V+ + +K + GV++ S D +R + I+LVKN P+G++ E+ +F
Sbjct: 482 AEAHVIGDVRKYFEDRGVDLTSF--------DKKERDDKIILVKNFPFGTTIDEIGELFS 541
Query: 546 KFGSLDKIILPPTKILALVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMA 605
+G L ++++PP +A++ F + ARAAF LAYKR+K + LYLE P ++ ++ P
Sbjct: 542 AYGQLKRMLMPPAGTIAIIEFRDAPSARAAFSKLAYKRFKSSILYLEKGPKDLFTREPTT 601
Query: 606 GNV-----KDEKISDGDARRAILEQATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLR 665
V + + +A+ + E E D + + + + ++FVKNLNF TT ++L
Sbjct: 602 NEVATIPEQQQNEHAVEAKISANEILGESKEDDEIESVQGPTVAVFVKNLNFATTVQALS 661
Query: 666 EHFSAHMKEGKIMSAKVKKHVK-KGQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHAL 725
+ F + + + K K K G+ +SMGFGF+EF + E A S L G VLD H L
Sbjct: 662 DLFKP-LPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKL 721
Query: 726 ILQMCHVKNDDKGQRKVDKEKSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFG 785
L++ H + + K S+K++++N+ FEAT KDL +LF +GQ+KS+R+P KF
Sbjct: 722 QLKLSHKQGTGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFD 781
Query: 786 KH-RGFAFVEFVTKQEAQNAFQALSNTHLYGRHLVLERAKEGESLEELRARTAAQFSNDH 836
+ RGFAFVEF +EA+ A L HL GR LV++ A++ E+ +
Sbjct: 782 QSARGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQYAEQDAENAEVEIERMTKKVKKQ 839
BLAST of Sed0014227 vs. ExPASy TrEMBL
Match:
A0A6J1IPQ4 (multiple RNA-binding domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478812 PE=4 SV=1)
HSP 1 Score: 1419.1 bits (3672), Expect = 0.0e+00
Identity = 738/843 (87.54%), Postives = 783/843 (92.88%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
MTETTSRICVKNLPKHIDD RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MTETTSRICVKNLPKHIDDHRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKE+K +KD +VE+D+S S LGS
Sbjct: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEEKGTKDKTEVENDKSMSLLGS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
K+EGDNLKL IQD+D K+QEFLQVTQPRINSKLWAND L+APE +GK KEK SQMK +
Sbjct: 121 KKEGDNLKLSIQDDDPKIQEFLQVTQPRINSKLWANDTLMAPE---DGKGKEKASQMKTV 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
++LELVNV+GDKAEE QTA KN AHDDK+SDMEYFKS++KKTWSDSETSD DN+DE
Sbjct: 181 GGRRLELVNVDGDKAEETQTALHKNPAHDDKISDMEYFKSRVKKTWSDSETSDVDNSDE- 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEM 300
DE ++K +EI DV + DSKL LKTK +E HSNH A++L+ EKSSSTLEDKKDEM
Sbjct: 241 ----DESMKKTLEIRDVPIVDSKLPLKTKAKEEGHSNHCDADILNREKSSSTLEDKKDEM 300
Query: 301 VESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
+ESGRLFVRNLPYAATEEELEEHF+KYGT+SEVHLVVDKDTRRSKGIAYILYTLPESAKR
Sbjct: 301 LESGRLFVRNLPYAATEEELEEHFRKYGTVSEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
Query: 361 ALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLK 420
ALEELDNSIFQGRLLHVMPAQLRK SEKPEE ILEGQRSKSFKQKREEERKASEASGN K
Sbjct: 361 ALEELDNSIFQGRLLHVMPAQLRKISEKPEENILEGQRSKSFKQKREEERKASEASGNTK 420
Query: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVN 480
AWNSLFMRPDTVVENIARKYGVSKGELLD EADDLAVRVALGETQVVAETK ALTNAGVN
Sbjct: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDGEADDLAVRVALGETQVVAETKNALTNAGVN 480
Query: 481 VASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALV 540
VASLEEFASG+ADGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILALV
Sbjct: 481 VASLEEFASGKADGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALV 540
Query: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILE 600
IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILS NP GNVKDEK+ +GDARR ILE
Sbjct: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSHNPTPGNVKDEKVGEGDARRVILE 600
Query: 601 QATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKG 660
QA EGISDVDFDPDRVESRSLFVKNLNFKTTDESLR+HFS +MKEG+I+SAKVKKH+KKG
Sbjct: 601 QAMEGISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSENMKEGRILSAKVKKHIKKG 660
Query: 661 QQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTK 720
Q VSMGFGFLEFDSVETAT VCSNLQGTVLDSHALILQMCHVK DD+GQRKVDKEKSSTK
Sbjct: 661 QHVSMGFGFLEFDSVETATRVCSNLQGTVLDSHALILQMCHVKKDDQGQRKVDKEKSSTK 720
Query: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
+LVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVE+VTKQEAQNAFQALSN
Sbjct: 721 ILVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEYVTKQEAQNAFQALSN 780
Query: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRKVADFDDEDSMKFQ 840
THLYGRHLVLERAKEGE+LEELRARTAAQFSNDHDKSQNP++SKKRK D +EDS KF
Sbjct: 781 THLYGRHLVLERAKEGETLEELRARTAAQFSNDHDKSQNPVLSKKRKQVDDFEEDSKKFL 835
Query: 841 RTD 844
RTD
Sbjct: 841 RTD 835
BLAST of Sed0014227 vs. ExPASy TrEMBL
Match:
A0A6J1FPF4 (multiple RNA-binding domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447619 PE=4 SV=1)
HSP 1 Score: 1418.3 bits (3670), Expect = 0.0e+00
Identity = 736/843 (87.31%), Postives = 783/843 (92.88%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
MTETTSRICVKNLPKHIDD RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MTETTSRICVKNLPKHIDDHRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKE+K +KD +VEDD+S S LGS
Sbjct: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEEKGTKDKTEVEDDKSKSLLGS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
K+EGDNLKL IQD+D K+QEFLQVTQPRINSKLWAND L APE +GK KEK S+MK +
Sbjct: 121 KKEGDNLKLRIQDDDPKIQEFLQVTQPRINSKLWANDTLTAPE---DGKSKEKASKMKTV 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
+++ELVNV+GDKAEE QTA KN AHDDK+SDMEYFKS++KKTWSDSETSD DN+DE
Sbjct: 181 GGRRMELVNVDGDKAEETQTALHKNPAHDDKISDMEYFKSRVKKTWSDSETSDVDNSDE- 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEM 300
DE I+KK+EI DV M DSKL LKTK +E HSNH A++L+ EKSSSTLEDKKDEM
Sbjct: 241 ----DESIKKKLEIRDVPMVDSKLPLKTKAKEEGHSNHCDADILNREKSSSTLEDKKDEM 300
Query: 301 VESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
+ESGRLFVRNLPYAATEEELEEHF++YGT+SEVHLVVDKDTRRSKGIAYILYT+PESAKR
Sbjct: 301 LESGRLFVRNLPYAATEEELEEHFRRYGTVSEVHLVVDKDTRRSKGIAYILYTVPESAKR 360
Query: 361 ALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLK 420
ALEELDNSIFQGRLLH+MPAQLRK SEKPEE ILEGQRSKSFKQKREEERKASEASGN K
Sbjct: 361 ALEELDNSIFQGRLLHIMPAQLRKISEKPEENILEGQRSKSFKQKREEERKASEASGNTK 420
Query: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVN 480
AWNSLFMRPDTVVENIARKYGVSKGELLD EADDLAVRVALGETQVVAETK ALTNAGVN
Sbjct: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDGEADDLAVRVALGETQVVAETKNALTNAGVN 480
Query: 481 VASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALV 540
VASLEEFASG+ADGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILALV
Sbjct: 481 VASLEEFASGKADGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALV 540
Query: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILE 600
IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILS NPM G+VKDEK+ +GDARR ILE
Sbjct: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSHNPMPGHVKDEKVGEGDARRVILE 600
Query: 601 QATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKG 660
QA EGISDVDFDPDRVESRSLFVKNLNFKTTDESLR+HFS +MKEG+I+SAKVKKH+KKG
Sbjct: 601 QAVEGISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSENMKEGRILSAKVKKHIKKG 660
Query: 661 QQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTK 720
Q VSMGFGFLEFDSVETAT VCSNLQGTVLDSHALILQMCHVK DD+GQRKVDKEKSSTK
Sbjct: 661 QHVSMGFGFLEFDSVETATRVCSNLQGTVLDSHALILQMCHVKKDDQGQRKVDKEKSSTK 720
Query: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
+LVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVE+VTKQEAQNAFQALSN
Sbjct: 721 ILVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEYVTKQEAQNAFQALSN 780
Query: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRKVADFDDEDSMKFQ 840
THLYGRHLVLERAKEGE+LEELRARTAAQFSND DKSQNP++SKKRK D +EDS KF
Sbjct: 781 THLYGRHLVLERAKEGETLEELRARTAAQFSNDRDKSQNPVLSKKRKQVDDFEEDSKKFL 835
Query: 841 RTD 844
RTD
Sbjct: 841 RTD 835
BLAST of Sed0014227 vs. ExPASy TrEMBL
Match:
A0A6J1JD24 (multiple RNA-binding domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483395 PE=4 SV=1)
HSP 1 Score: 1396.7 bits (3614), Expect = 0.0e+00
Identity = 719/843 (85.29%), Postives = 783/843 (92.88%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
M ++TSRICVKNLPK IDD+RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MVDSTSRICVKNLPKFIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
AI YFNKSFL+THRI CE AWKVGDPKIPRPWSKHSKEKK KDG++VE D++ SFLGS
Sbjct: 61 AAIHYFNKSFLSTHRITCESAWKVGDPKIPRPWSKHSKEKKGIKDGMEVEYDKNVSFLGS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
KEEGD+LKL IQD+D K+QEFLQVTQ R+NSK+WANDIL+APE QNGK KEKPS MK +
Sbjct: 121 KEEGDDLKLSIQDDDPKIQEFLQVTQTRVNSKVWANDILMAPETDQNGKGKEKPSHMKKI 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
D KKL+LVNV+GDKAEEM+T+ NSAHDDK+SDMEYF S++ K WSDS+TSDDDN DED
Sbjct: 181 DGKKLKLVNVDGDKAEEMKTSLHTNSAHDDKISDMEYFNSRVTKKWSDSQTSDDDNIDED 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEM 300
+N++E I+KK+E++DVQM DSKL L+T+ EE DHSNH A++L +E+SSS LEDKKDEM
Sbjct: 241 AENENEPIKKKLEMKDVQMVDSKLPLETEAEEEDHSNHCDADLLHMEESSSILEDKKDEM 300
Query: 301 VESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
+E+GRLFVRNLPYAATEEELEEHF K+GT+SEVHLVVDKDTRRSKGIAYILY+ PE AKR
Sbjct: 301 LENGRLFVRNLPYAATEEELEEHFGKFGTVSEVHLVVDKDTRRSKGIAYILYSHPEFAKR 360
Query: 361 ALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLK 420
ALEELD+SIFQGRLLHVMPAQLRKT EKPEE ILE QRSKSFK+KREEERKASEASGN +
Sbjct: 361 ALEELDSSIFQGRLLHVMPAQLRKTFEKPEENILENQRSKSFKKKREEERKASEASGNTR 420
Query: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVN 480
AWNSLFMRPDTVVENIARKYGVSKGELLDRE+DDLAVRVALGETQVVAETKKALTNAGVN
Sbjct: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDRESDDLAVRVALGETQVVAETKKALTNAGVN 480
Query: 481 VASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALV 540
VASLEEFASG+ DGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILALV
Sbjct: 481 VASLEEFASGKVDGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALV 540
Query: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILE 600
IFLEPS ARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPM GNVKDEK+ +GDARR ILE
Sbjct: 541 IFLEPSGARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMDGNVKDEKVGEGDARRVILE 600
Query: 601 QATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKG 660
QA +GISDVDFDPDRVESRSLFVKNLNFKTTDESLR+HFS HMK G+I+SAKVKKH+KKG
Sbjct: 601 QAVDGISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSEHMKGGRILSAKVKKHIKKG 660
Query: 661 QQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTK 720
Q VSMGFGFLEFDSVETATSVCSNLQGTVLD HA++LQMCHVK D++GQRKV+KEKSSTK
Sbjct: 661 QHVSMGFGFLEFDSVETATSVCSNLQGTVLDGHAIMLQMCHVKKDNQGQRKVEKEKSSTK 720
Query: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN
Sbjct: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
Query: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRKVADFDDEDSMKFQ 840
THLYGRHLVLERAKEGESLEELRARTAAQFSND DKSQNPI+SKKRK DE+SM+F+
Sbjct: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDQDKSQNPILSKKRKQRAEFDEESMEFE 840
Query: 841 RTD 844
RT+
Sbjct: 841 RTE 843
BLAST of Sed0014227 vs. ExPASy TrEMBL
Match:
A0A6J1ET60 (multiple RNA-binding domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437499 PE=4 SV=1)
HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 713/827 (86.22%), Postives = 775/827 (93.71%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
MT++TSRICVKNLPK IDD+RLRTLFS+KGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MTDSTSRICVKNLPKFIDDNRLRTLFSDKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
AI YFNKSFL+THRIACE AWKVGDPKIPRPWSKHSKEKK KDG++VEDD++ SFLGS
Sbjct: 61 AAIHYFNKSFLSTHRIACESAWKVGDPKIPRPWSKHSKEKKGIKDGMEVEDDKNLSFLGS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
KEEGD+LKL IQD+D K+ EFLQVTQPR+NSK+WANDIL+APE QNGK KEKPS MK +
Sbjct: 121 KEEGDDLKLSIQDDDPKIHEFLQVTQPRVNSKVWANDILMAPETDQNGKGKEKPSHMKKI 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
D +L+LVNV+GDKAEEM+T+ NSAHDDK+SDMEYF S++ K WSDSETSDDDN DED
Sbjct: 181 DGNQLKLVNVDGDKAEEMKTSLHTNSAHDDKISDMEYFNSRVTKKWSDSETSDDDNIDED 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEM 300
KN+DE I+KK+E++DVQM DS+L L+T+ EE DHSNH A++L +E+SSS LEDKKDEM
Sbjct: 241 AKNEDETIKKKLEMKDVQMVDSELPLETEAEEEDHSNHCDADLLHMEESSSILEDKKDEM 300
Query: 301 VESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
+E+GRLFVRNLPYAATEEELEEHF+KYGT+SEVHLVVDKDTRRSKGIAYILY+ PE AKR
Sbjct: 301 LENGRLFVRNLPYAATEEELEEHFRKYGTVSEVHLVVDKDTRRSKGIAYILYSHPEFAKR 360
Query: 361 ALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLK 420
ALEELD+SIFQGRLLHVMPAQLRKT EKPEE ILE QRSKSFK+KREEERKASEASGN +
Sbjct: 361 ALEELDSSIFQGRLLHVMPAQLRKTFEKPEENILEDQRSKSFKKKREEERKASEASGNTR 420
Query: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVN 480
AWNSLFMRPDTVVENIARKYGVSKGELLDRE+DDLAVRVALGETQVVAETKKALTNAGVN
Sbjct: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDRESDDLAVRVALGETQVVAETKKALTNAGVN 480
Query: 481 VASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALV 540
VASLEEFASG+ DGHKRSNHILLVKNLPYGSSEGEL+NMF KFGSLDKIILPPTKILALV
Sbjct: 481 VASLEEFASGKVDGHKRSNHILLVKNLPYGSSEGELANMFEKFGSLDKIILPPTKILALV 540
Query: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILE 600
IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNIL QNPM GNVKDEK+ +GDARR ILE
Sbjct: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILCQNPMDGNVKDEKVGEGDARRVILE 600
Query: 601 QATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKG 660
QA +GISDVDFDPDRVESRSLFVKNLNFKT+DESLR+HFS HMKEG+I+SAKVKKH+KKG
Sbjct: 601 QAVDGISDVDFDPDRVESRSLFVKNLNFKTSDESLRKHFSEHMKEGRILSAKVKKHIKKG 660
Query: 661 QQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTK 720
Q VSMGFGFLEFDSVETATSVC+NLQGTVLD HA++LQMCHVK D++GQRKVDKEKSSTK
Sbjct: 661 QHVSMGFGFLEFDSVETATSVCNNLQGTVLDGHAVMLQMCHVKKDNQGQRKVDKEKSSTK 720
Query: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN
Sbjct: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
Query: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRK 828
THLYGRHLVLERAKEGESLEELRARTAAQFSND DKSQ+PI+SKKRK
Sbjct: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDQDKSQHPILSKKRK 827
BLAST of Sed0014227 vs. ExPASy TrEMBL
Match:
A0A6J1JB46 (multiple RNA-binding domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483395 PE=4 SV=1)
HSP 1 Score: 1386.7 bits (3588), Expect = 0.0e+00
Identity = 712/827 (86.09%), Postives = 772/827 (93.35%), Query Frame = 0
Query: 1 MTETTSRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
M ++TSRICVKNLPK IDD+RLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ
Sbjct: 1 MVDSTSRICVKNLPKFIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQ 60
Query: 61 EAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGS 120
AI YFNKSFL+THRI CE AWKVGDPKIPRPWSKHSKEKK KDG++VE D++ SFLGS
Sbjct: 61 AAIHYFNKSFLSTHRITCESAWKVGDPKIPRPWSKHSKEKKGIKDGMEVEYDKNVSFLGS 120
Query: 121 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 180
KEEGD+LKL IQD+D K+QEFLQVTQ R+NSK+WANDIL+APE QNGK KEKPS MK +
Sbjct: 121 KEEGDDLKLSIQDDDPKIQEFLQVTQTRVNSKVWANDILMAPETDQNGKGKEKPSHMKKI 180
Query: 181 DVKKLELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 240
D KKL+LVNV+GDKAEEM+T+ NSAHDDK+SDMEYF S++ K WSDS+TSDDDN DED
Sbjct: 181 DGKKLKLVNVDGDKAEEMKTSLHTNSAHDDKISDMEYFNSRVTKKWSDSQTSDDDNIDED 240
Query: 241 VKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEM 300
+N++E I+KK+E++DVQM DSKL L+T+ EE DHSNH A++L +E+SSS LEDKKDEM
Sbjct: 241 AENENEPIKKKLEMKDVQMVDSKLPLETEAEEEDHSNHCDADLLHMEESSSILEDKKDEM 300
Query: 301 VESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKR 360
+E+GRLFVRNLPYAATEEELEEHF K+GT+SEVHLVVDKDTRRSKGIAYILY+ PE AKR
Sbjct: 301 LENGRLFVRNLPYAATEEELEEHFGKFGTVSEVHLVVDKDTRRSKGIAYILYSHPEFAKR 360
Query: 361 ALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLK 420
ALEELD+SIFQGRLLHVMPAQLRKT EKPEE ILE QRSKSFK+KREEERKASEASGN +
Sbjct: 361 ALEELDSSIFQGRLLHVMPAQLRKTFEKPEENILENQRSKSFKKKREEERKASEASGNTR 420
Query: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVN 480
AWNSLFMRPDTVVENIARKYGVSKGELLDRE+DDLAVRVALGETQVVAETKKALTNAGVN
Sbjct: 421 AWNSLFMRPDTVVENIARKYGVSKGELLDRESDDLAVRVALGETQVVAETKKALTNAGVN 480
Query: 481 VASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALV 540
VASLEEFASG+ DGHKRSNHILLVKNLPYGSSEGEL+NMFGKFGSLDKIILPPTKILALV
Sbjct: 481 VASLEEFASGKVDGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALV 540
Query: 541 IFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARRAILE 600
IFLEPS ARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPM GNVKDEK+ +GDARR ILE
Sbjct: 541 IFLEPSGARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMDGNVKDEKVGEGDARRVILE 600
Query: 601 QATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKKG 660
QA +GISDVDFDPDRVESRSLFVKNLNFKTTDESLR+HFS HMK G+I+SAKVKKH+KKG
Sbjct: 601 QAVDGISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSEHMKGGRILSAKVKKHIKKG 660
Query: 661 QQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTK 720
Q VSMGFGFLEFDSVETATSVCSNLQGTVLD HA++LQMCHVK D++GQRKV+KEKSSTK
Sbjct: 661 QHVSMGFGFLEFDSVETATSVCSNLQGTVLDGHAIMLQMCHVKKDNQGQRKVEKEKSSTK 720
Query: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN
Sbjct: 721 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 780
Query: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRK 828
THLYGRHLVLERAKEGESLEELRARTAAQFSND DKSQNPI+SKKRK
Sbjct: 781 THLYGRHLVLERAKEGESLEELRARTAAQFSNDQDKSQNPILSKKRK 827
BLAST of Sed0014227 vs. TAIR 10
Match:
AT4G19610.1 (nucleotide binding;nucleic acid binding;RNA binding )
HSP 1 Score: 780.4 bits (2014), Expect = 1.5e-225
Identity = 449/833 (53.90%), Postives = 575/833 (69.03%), Query Frame = 0
Query: 6 SRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
SRICVKNLPKH+ +D+LR FS+KGEITD KLMR+ DGKSRQF FIGFR+ EAQ+AI+Y
Sbjct: 2 SRICVKNLPKHVKEDQLRDHFSQKGEITDAKLMRSNDGKSRQFGFIGFRSAQEAQQAIKY 61
Query: 66 FNKSFLNTHRIACEIAWKVGDPKIPRPWSK--HSKE---KKESKDGIKVEDDRSSSFLGS 125
FN ++L T I EIA KVGD PRPWS+ H KE KK S +G+K G+
Sbjct: 62 FNNTYLGTSLIIVEIAHKVGDENAPRPWSRLSHKKEEEAKKSSSEGLKD---------GN 121
Query: 126 KEEGDNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNM 185
+ G K + D + QEFL+V Q R SK+W+ND+ + P + GK K +
Sbjct: 122 AKGGKKRKAEVDDPEF--QEFLEVHQ-RSKSKIWSNDMSIPPAPEETGKEKVLVKKADEQ 181
Query: 186 DVKKLELVNVEGDKAEEM----QTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDN 245
V VE KA++ +T K A D +SDMEYFKS++KK SDSE+ ++
Sbjct: 182 IVSN----GVEPKKAKKSSDTEKTKKSKVVAASDDVSDMEYFKSRIKKNLSDSESDNESE 241
Query: 246 NDEDVKNKDEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDK 305
+ + + D+ + + + +D ++ + VE + + VE ++
Sbjct: 242 DSSEDEAGDDDGKAETDGQDADIR--YFPIDGDVEAGGVGKDDDGDAMEVEGDGKVAQES 301
Query: 306 K---DEMVESGRLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYT 365
K D+++++GRLFVRNLPY ATEEEL EHF +G ISEVHLV+DK+T+RS+GIAYILY
Sbjct: 302 KAVSDDVLDTGRLFVRNLPYTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYL 361
Query: 366 LPESAKRALEELDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKAS 425
+PE A RA+EELDNS FQGRLLH++PA+ R+TS+K K+FKQKREE+RKAS
Sbjct: 362 IPECAARAMEELDNSSFQGRLLHILPAKHRETSDKQVND--TSNLPKTFKQKREEQRKAS 421
Query: 426 EASGNLKAWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKA 485
EA G+ KAWNSLFMRPDT++ENI R YGVSK ELLDREA+D AVR+ALGET+V+AETK+A
Sbjct: 422 EAGGDTKAWNSLFMRPDTILENIVRVYGVSKSELLDREAEDPAVRLALGETKVIAETKEA 481
Query: 486 LTNAGVNVASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPP 545
L AGVNV SLE+FA+ D RS HILLVKNLP+ S+E EL+ MFGKFGSLDKIILPP
Sbjct: 482 LAKAGVNVTSLEKFATRNGDEKNRSKHILLVKNLPFASTEKELAQMFGKFGSLDKIILPP 541
Query: 546 TKILALVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILS-QNPMAGNVKDEKISDG 605
TK +AL +FLEP+ ARAA KG+AYKRYKDAPLYLEWAP NIL +N N + I +
Sbjct: 542 TKTMALAVFLEPAEARAALKGMAYKRYKDAPLYLEWAPGNILEPKNLPDTNEERSDIEEN 601
Query: 606 DARRAILEQATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAK 665
RR LEQ V+ DPD ES L VKNL+FKTTDE L++HF+ +K+GKI+S
Sbjct: 602 GVRRVNLEQ------QVEIDPDVTESNVLNVKNLSFKTTDEGLKKHFTKLVKQGKILSVT 661
Query: 666 VKKHVKKGQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKV 725
+ KH K + +S G+GF+EFDSVETATSV +LQGTVLD HALIL+ C K DK +
Sbjct: 662 IIKHKKNEKYLSSGYGFVEFDSVETATSVYRDLQGTVLDGHALILRFCENKRSDKVGKDS 721
Query: 726 DKEKSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMK-FGKHRGFAFVEFVTKQEA 785
+K+K TKL V+N+AFEAT ++LRQLFSP+GQIKS+RLP K G++ G+AFVEFVTKQEA
Sbjct: 722 NKDKPCTKLHVKNIAFEATKRELRQLFSPFGQIKSMRLPKKNIGQYAGYAFVEFVTKQEA 781
Query: 786 QNAFQALSNTHLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISK 825
NA +AL++TH YGRHLVLE A + S+E +R R+AA+F ++D ++ SK
Sbjct: 782 LNAKKALASTHFYGRHLVLEWANDDNSMEAIRKRSAAKFDEENDNARKRKSSK 808
BLAST of Sed0014227 vs. TAIR 10
Match:
AT5G08695.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 569.7 bits (1467), Expect = 3.9e-162
Identity = 356/744 (47.85%), Postives = 466/744 (62.63%), Query Frame = 0
Query: 6 SRICVKNLPKHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
SRI VKN+PK++ +D+LR +FSEKGEITDVKL R DG+SRQFA+IGFR+E +AQ+AI Y
Sbjct: 4 SRIIVKNVPKYVTEDQLRGIFSEKGEITDVKLKRLSDGRSRQFAYIGFRSEQKAQDAITY 63
Query: 66 FNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGSKEEGD 125
FNK+F ++H+I+ +A DP R K K K K + +
Sbjct: 64 FNKNFKHSHQISVLVA----DPPPRRTQGKVDAYAKGDKQIQKKDPE------------- 123
Query: 126 NLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNMDVKKL 185
D+D ++QEFL K W+ND+ + P NG ++ +D KK
Sbjct: 124 ------VDHDPQLQEFLHQEH---KLKFWSNDMCIHP---SNGADDPNKAKRSFLDSKK- 183
Query: 186 ELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTW-SDSETSDDDNNDEDVKNK 245
+RK+ DD +SDMEYFKS++KK SD ET ++ ED N
Sbjct: 184 ----------------TRKSKVGDD-VSDMEYFKSRIKKNLDSDCET----DSREDAINV 243
Query: 246 DEFIEKKMEIEDVQMKDSKLSLKTKVEENDHSNHYVAEVLSVEKSSSTLEDKKDEMVESG 305
D ++K ++ + D H + VE D D+++++G
Sbjct: 244 FPI--------DGEVKADRV-------DKDDDGH----AMEVE------ADGSDDVLDAG 303
Query: 306 RLFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKRALEE 365
RLFV LPY+ TEEEL EHF K+G ISEVHLV+DKDTR +G+A++LY +PESAK A+++
Sbjct: 304 RLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKMAMDK 363
Query: 366 LDNSIFQGRLLHVMPAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLKAWNS 425
LD FQGR LH++PA+ R S K + KSFK++REE+RKASEA GN AWNS
Sbjct: 364 LDKLPFQGRTLHILPAKPRAMSAKQVDN--SSNLPKSFKKEREEQRKASEACGNTNAWNS 423
Query: 426 LFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVNVASL 485
FMRPDT++EN+ R YGV+K ELLDRE +D AVR+ALGET+V+ ETK+AL AGV V SL
Sbjct: 424 FFMRPDTILENLVRSYGVTKSELLDRECEDPAVRLALGETRVIMETKEALAKAGVRVTSL 483
Query: 486 EEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIILPPTKILALVIFLE 545
EEFA+ + D RS HILLVK+LP+ S+E EL+ MF KFGSLDKI+LPPTK +ALV+FLE
Sbjct: 484 EEFAARKGDVKNRSKHILLVKHLPFASTEKELAQMFRKFGSLDKIVLPPTKTMALVVFLE 543
Query: 546 PSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGN-VKDEKISDGDARRAILEQAT 605
+ ARAA GLAY RYKDAPLYLEWAP +IL +A N K + + DARR L+Q
Sbjct: 544 AAEARAAMNGLAYTRYKDAPLYLEWAPRDILEPKALADNKEKKSAVEENDARRVNLDQQV 603
Query: 606 EGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKHVKK-GQQ 665
SD+ ES L VKNL+FKTTDE L++H + +K+GKI+S VK+ ++ ++
Sbjct: 604 GIYSDI------TESNVLHVKNLSFKTTDEGLKKHLTGVVKQGKILS--VKQIIRDWTRR 661
Query: 666 VSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQRKVDKEKSSTKLL 725
S G+GF+EFDSVETATSV +L G VLD H+LIL K + DK KL
Sbjct: 664 RSSGYGFVEFDSVETATSVYRDLPGNVLDGHSLILNFSENKRSETVGEGSDKVTKLAKLH 661
Query: 726 VRNVAFEATGKDLRQLFSPYGQIK 747
V+NVAFEAT K+LRQLFSP+GQI+
Sbjct: 724 VKNVAFEATKKELRQLFSPFGQIQ 661
BLAST of Sed0014227 vs. TAIR 10
Match:
AT5G05720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 103.6 bits (257), Expect = 7.9e-22
Identity = 87/236 (36.86%), Postives = 120/236 (50.85%), Query Frame = 0
Query: 6 SRICVKNLP-KHIDDDRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIR 65
S I VKNLP KH+ ++RLR +FS KGEI DVKL R DGKSRQFA+IGFRTE EAQ+AI
Sbjct: 2 SWIIVKNLPSKHVTEERLRDVFSRKGEIADVKLKRKSDGKSRQFAYIGFRTEQEAQDAIT 61
Query: 66 YFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEKKESKDGIKVEDDRSSSFLGSKEEG 125
Y NK F++T+RI+ E+A DP P + KE E F + +G
Sbjct: 62 YVNKCFIDTYRISVEVA----DP----PPREEGKENTE-------------HFSNAYAKG 121
Query: 126 DNLKLGIQDNDLKVQEFLQVTQPRINSKLWANDILVAPEGAQNGKVKEKPSQMKNMDVKK 185
D K+++ +P V+P+GA K K S + + +K
Sbjct: 122 DK----------KIKK-----KPE-----------VSPDGADEPN-KAKISLLDSKKTRK 172
Query: 186 LELVNVEGDKAEEMQTASRKNSAHDDKLSDMEYFKSKMKKTWSDSETSDDDNNDED 241
+++V + G D +SDMEY+KS+ KK SDS++ + ED
Sbjct: 182 IKVVALVG-----------------DDVSDMEYYKSRTKKNLSDSDSDCETYGCED 172
HSP 2 Score: 97.1 bits (240), Expect = 7.4e-20
Identity = 96/297 (32.32%), Postives = 142/297 (47.81%), Query Frame = 0
Query: 540 VIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKD-EKISDGDARRAI 599
V+FLEP AR A KG+ + + + AP +IL +A N ++ + + D RR +
Sbjct: 204 VVFLEPIEAREALKGMGVQALQRCS-PVSGAPRDILEPKALADNNENTSDVEENDVRRRL 263
Query: 600 -LEQATEGISDVDFDPDRVESRSLFVKNLNFKT-------TDESLREHFSAHMKEGKIMS 659
L+Q V D D E L+ F+T TDESL++H + +K+GKI+S
Sbjct: 264 NLDQ------QVGIDSDITEVCPLYDCCGRFETMYSELQDTDESLKKHLTELVKQGKILS 323
Query: 660 AKVKKHVKKGQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQR 719
K GTV+D HALIL K +
Sbjct: 324 FK----------------------------------GTVVDGHALILSFSKNKPSGTVGK 383
Query: 720 KVDKEKSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQE 779
+DK+ TKL V+N+AFEAT K++RQLF+P+GQIKS+ LP + K R +A +T
Sbjct: 384 DLDKDTILTKLHVKNIAFEATMKEVRQLFTPFGQIKSVGLPER-TKGR-YAACSSLTSLN 443
Query: 780 AQNAFQALSNTHLYGRHLVLERAKEGESLEELRARTAAQFSNDHDKSQNPIISKKRK 828
A S+T V+E K S++ +R R+AA++ + ++ NP KKRK
Sbjct: 444 A-------SSTRYLPSLQVIEWKKVDNSMKAIRYRSAAKYVD--QENNNP---KKRK 445
BLAST of Sed0014227 vs. TAIR 10
Match:
AT1G49760.1 (poly(A) binding protein 8 )
HSP 1 Score: 85.5 bits (210), Expect = 2.2e-16
Identity = 107/413 (25.91%), Postives = 164/413 (39.71%), Query Frame = 0
Query: 306 LFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKRALEEL 365
L+V +L T+ +L E F + G + V + D TRRS G Y+ Y P+ A RAL EL
Sbjct: 47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106
Query: 366 DNSIFQGRLLHVM----PAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLKA 425
+ GR + VM LRK+ I KS K E ++
Sbjct: 107 NFMALNGRAIRVMYSVRDPSLRKSG---VGNIFIKNLDKSIDHKALHETFSA-------- 166
Query: 426 WNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVNV 485
P + G SKG + D A + A+ + + K + G V
Sbjct: 167 -----FGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQV-YVGPFV 226
Query: 486 ASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIIL-----PPTKI 545
L+ SGE K + VKNL S+ EL+ +FG+FG ++ +K
Sbjct: 227 HKLQRDPSGE----KVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKG 286
Query: 546 LALVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARR 605
V F A A L K + D EW G + + + + ++
Sbjct: 287 FGFVNFENSDDAARAVDALNGKTFDDK----EW----------FVGKAQKKSERETELKQ 346
Query: 606 AILEQATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKH 665
+ E D+ + +L+VKNL+ TD+ LREHF+ G I S KV
Sbjct: 347 KFEQSLKEA-------ADKSQGSNLYVKNLDESVTDDKLREHFAPF---GTITSCKV--- 406
Query: 666 VKKGQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQ 710
++ VS G GF+ F + E AT + + G ++ + L + + K D K +
Sbjct: 407 MRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKAR 411
BLAST of Sed0014227 vs. TAIR 10
Match:
AT1G49760.2 (poly(A) binding protein 8 )
HSP 1 Score: 85.5 bits (210), Expect = 2.2e-16
Identity = 107/413 (25.91%), Postives = 164/413 (39.71%), Query Frame = 0
Query: 306 LFVRNLPYAATEEELEEHFQKYGTISEVHLVVDKDTRRSKGIAYILYTLPESAKRALEEL 365
L+V +L T+ +L E F + G + V + D TRRS G Y+ Y P+ A RAL EL
Sbjct: 47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106
Query: 366 DNSIFQGRLLHVM----PAQLRKTSEKPEETILEGQRSKSFKQKREEERKASEASGNLKA 425
+ GR + VM LRK+ I KS K E ++
Sbjct: 107 NFMALNGRAIRVMYSVRDPSLRKSG---VGNIFIKNLDKSIDHKALHETFSA-------- 166
Query: 426 WNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNAGVNV 485
P + G SKG + D A + A+ + + K + G V
Sbjct: 167 -----FGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQV-YVGPFV 226
Query: 486 ASLEEFASGEADGHKRSNHILLVKNLPYGSSEGELSNMFGKFGSLDKIIL-----PPTKI 545
L+ SGE K + VKNL S+ EL+ +FG+FG ++ +K
Sbjct: 227 HKLQRDPSGE----KVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKG 286
Query: 546 LALVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQNPMAGNVKDEKISDGDARR 605
V F A A L K + D EW G + + + + ++
Sbjct: 287 FGFVNFENSDDAARAVDALNGKTFDDK----EW----------FVGKAQKKSERETELKQ 346
Query: 606 AILEQATEGISDVDFDPDRVESRSLFVKNLNFKTTDESLREHFSAHMKEGKIMSAKVKKH 665
+ E D+ + +L+VKNL+ TD+ LREHF+ G I S KV
Sbjct: 347 KFEQSLKEA-------ADKSQGSNLYVKNLDESVTDDKLREHFAPF---GTITSCKV--- 406
Query: 666 VKKGQQVSMGFGFLEFDSVETATSVCSNLQGTVLDSHALILQMCHVKNDDKGQ 710
++ VS G GF+ F + E AT + + G ++ + L + + K D K +
Sbjct: 407 MRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKAR 411
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022979061.1 | 0.0e+00 | 87.54 | multiple RNA-binding domain-containing protein 1-like [Cucurbita maxima] >XP_022... | [more] |
XP_022942645.1 | 0.0e+00 | 87.31 | multiple RNA-binding domain-containing protein 1-like [Cucurbita moschata] >XP_0... | [more] |
XP_038894962.1 | 0.0e+00 | 87.50 | multiple RNA-binding domain-containing protein 1 [Benincasa hispida] | [more] |
XP_023525617.1 | 0.0e+00 | 87.07 | multiple RNA-binding domain-containing protein 1 isoform X2 [Cucurbita pepo subs... | [more] |
KAG7031177.1 | 0.0e+00 | 87.23 | MRD1, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Q9Y4C8 | 1.2e-128 | 35.10 | Probable RNA-binding protein 19 OS=Homo sapiens OX=9606 GN=RBM19 PE=1 SV=3 | [more] |
Q54PB2 | 3.6e-128 | 35.17 | Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium discoideum OX=... | [more] |
Q8R3C6 | 2.7e-123 | 33.06 | Probable RNA-binding protein 19 OS=Mus musculus OX=10090 GN=Rbm19 PE=1 SV=1 | [more] |
Q4PC17 | 3.4e-118 | 34.51 | Multiple RNA-binding domain-containing protein 1 OS=Ustilago maydis (strain 521 ... | [more] |
Q5AJS6 | 1.2e-115 | 32.56 | Multiple RNA-binding domain-containing protein 1 OS=Candida albicans (strain SC5... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IPQ4 | 0.0e+00 | 87.54 | multiple RNA-binding domain-containing protein 1-like OS=Cucurbita maxima OX=366... | [more] |
A0A6J1FPF4 | 0.0e+00 | 87.31 | multiple RNA-binding domain-containing protein 1-like OS=Cucurbita moschata OX=3... | [more] |
A0A6J1JD24 | 0.0e+00 | 85.29 | multiple RNA-binding domain-containing protein 1-like isoform X1 OS=Cucurbita ma... | [more] |
A0A6J1ET60 | 0.0e+00 | 86.22 | multiple RNA-binding domain-containing protein 1-like OS=Cucurbita moschata OX=3... | [more] |
A0A6J1JB46 | 0.0e+00 | 86.09 | multiple RNA-binding domain-containing protein 1-like isoform X2 OS=Cucurbita ma... | [more] |