Sed0014205 (gene) Chayote v1

Overview


Name	Sed0014205
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Trafficking protein particle complex II-specific subunit 130-like protein
Location	LG04: 42333267 .. 42336942 (-)
RNA-Seq Expression	Sed0014205
Synteny	Sed0014205

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATTCGAATCCCCCACCCCTAATTTTTGTAATCTCAAAAAATTACAAAACAGTTTAGTCACTAAAGTCTAGAGAGAAATATAACGTCTTTCAGAGCTCTCTTGATTCCTTGGGAGGTTTTTGCAACACTCTAGGTCCAGGATTGGGCTCCACTCTTGTTGCTTCAAGTTAAGAAAACTTAACTTTGGAATTCTTTATGGTTGAGCTACCGAAAAGGAAGGTTTACCTTGTTGGTAAAGGTAGTAAATGAGATCTTGGAGCTGCCATTCATGGATGAGGAAATTTGGTCCAGGATTCTTGTTAATCCGAAGATCTAAGAGAAACATTCTTATTTATACTCTTTGGATTTAAGACAGAATTTTGCACAAAGTTGGTATTGGTAAAACAATATCCTTCTGGACTGATCATTGGCTTACAGGCGCTCCTTTGCATAGAAGCTTTTCTTGTCTTTACAACTTCGTTTGCAACAAGAGTGGCACTATTGAAGATTATAGTAACCAGACATGGAATTTTTCTTTTAAAAGAAGCTTAAAAGATGGTGAGATACCAGATTATGGGGCCCTTCTGCAAGTCATCTCTGATTTGACACTTTCCAATAGGAGAGACACTACCCTTTGGAAACCAGAACATGAAGGCATTTCTCCATCAAATCCCTCATGAATGATACAAATACTTCGTTTGATGAACCAACCAGTGTGTTATTCAACATCATCTAGAAAGGCAAATACCCCAAAAACATTCAATACAAATGACAGGCTGCAAAGAAGACTTCCCCACATGACCCTTCAGCCCCTATTTGTCGAAATGGGTCTGAGACTCAACGCCATCTTTTTGGAAAATGCAACTTTGCCATGGAGTTCTGCAGTCAGATTTTGCCAGCATTCAAGTGGCAGATTATCCTTCAACTTAAGTGAGTTGATTAGTGATTTAACATGATTCAACTAGAAAGTTTTGTGTCAAATCTTGTCAAGTCATTTTATCCTCAATTGATATTGATTTCTACTTGTTGGACATTTCTCTAATTTTAAGTATACAAACGAGAGCAGTGTTGTTGGTTGATATAATTTTAAGTATACAAGCGAGAGCGGTGTTGTTGGTTGATATAATTAAGTTTTACTTCAACCCATCAGCTTAAGCTCTTAGTTTAAGTTGATTGGTAATTTAATAAGGTTCAACCATTTGTATTTCCCATTCTCCTGAGCATGAGATTGAGAATATGATTTCTAACCAACCTATTATTTTTCACAAAAGGGAAAAGCATTTTTTCAGTCTTTCTGCCAAAAATGTATCAGATGGAGATGCAGTGACAAGTCTGGAAAGCATATTAAATATTAGATATGGAATCTATGGGGACAGAACGCTCGGTGCACACCTGCCTGTTGCTATAGAAGCATCTGTAACTGAATATGATAAACAGAACTTGCTCTTCAAGAGCGCTCTAGTTTTGCAAAGGCCTGTACTTCACCCTTTCCTGCCTGTTGGATTTGTTCCTCTTTCTTCCAAGGGGCTAAGAGTCGGACAGCTTATTACTATGAAATGGAGGATTGAAAGGGTAATTACTTTGCAAGAGAATGAAGATTCCACATGCAATGTAAGTCACGGAATTATCTTGAACTCCTTGAATAAAATTGAGTGTTAAAAATTCCACACGTGTATATCTATTTCTTTCGTTTATCAACGTTGCTTTTTTTTATCACAGGTATTGTAGTGTTGCACCTTAAAATGTAATTCTTGATTAAGTAAAGCTCCACTTGATAACCATTTGGCTTTTTATTTTTAGTTTTTGAGATTTAAGCTTATTTTTATTCATATTTCCTACAATGTGCTTCATCTTCTCTACAATGTATCTAACTTTTCTTAAGAAAGTATGTGAATCCTACTAAATTTCAAAAACAAAAACAAATTTTTAAAAGTTTTTTTTTTTGTTTCCAAATTTTGGTTTAGTTTCTACGAATATAGTAAGATGTAGATATCCATGTAGAAGAAAACATATGATATGGTAGTTGTTGTAGACTTAAATTTTAATAACAAAAGACAAAATAGTTATCAAAGTTCAAACTATGGGGAAATGAGAGCTACCTAACAAGAATCAAGTATGACAGTTATTTATCTAAGAAATAATTTTTTACGAATTTCCTTGACATCCAAATGTTGTAGGGTCAAGAGGTATGTCCCGTGAGATTAGTCAAGGTACATATAAGCCGGCTCAAACACTCGCGAATATAAAATAAAGCATTGGAATAAATTGAATGTAAAATAAGAACAAGAAGATAAACCAAGTATAAGGTACTTGGAACCTCCCTTTTTGAGTATGCTAACTCAAGCCTTAAATAACTAAACAATTGTATGTCTTCTCTTACTTCCCCCTCCTATTTATAACCAAATATCCTAATTCCTAAATAATTCCTTCATCTAATTATCCTTACTCCCCTAGCTCATATACTACCAATACTCCTAATATAATCCCTATTCATACTCTCATGGCATGATATAGCATCTTTCTTTTCTCTTATTTTCCTTTAACGATAGTTTGATTTCAGCTCTTCCAAATCAAGTGAAATGAGTTCTTGCATTCGACTGTGTTTTGTGATTTTTTAATTCCATAGTTCTGAGCAGATACCATAGTTCCCTTGTGCCCAGCCGCTCATTTGGTTGTTTGGGAGCATGACAGTCACCTATAAGCCTATAATTTAAAGTAGAAGATCACAATGCTTGTTCATCCACTCCTACTTCAACGATGCTATATAACGTTTATTGCTTGTGCAGCTTGACGATGTACTTTGCGAAATTGATGCTAAATCCGAAAACTGGATGATTGCCGGTAGGAAAAGAGGGCACGTTTCACTCTCTGCCAAGCAAGGTTTGTTTACCCTTTTTACCACGCAAAAGAAACTGAAGATGATAACTGATAAGTGACCTGCAGCCTATTAGAAGAAAGAAATCATTAAGAAAAATGAAACCTATTGTAGAGAAATAATGAGAAGAAAAAAAAAACACTTCAAAAACCTGGTTATGTAATGGGGCCTGCCTGATCAAACTGAATGCTATTCTGCTGTCATTTTTAAAAGAAATGTTTTATGATGCTTTTTCAATGACAGGGTCGAGAATGGTGATCTCGATATTATGTATGCCTCTGGTGGCTGGTTATGTTTGTCCACCTAAACTCGGTTTGCCAAATATCGACAAGGCGAATATAAGTTGCAATCTTGTTGCTCCACACCTGGTTTGTGTCTTACCTCCAGCACTCAGCTCCTCATTCTGTATTCCAGCATGATTGTTCTTCACACATGTTTTTCATTACCATAGTTGTTATGTTTTCCCCTCTGAATTATACAAAAGGATTCCGTCCCATCGTAAATTCGATTTGTAAAGATTCAAACTAGCTGTTACTGTTGAATCTCTTCCACTCTCCTCGGGTCAAAGATTTTTAGTCATCCTATGAGTGATTCTTGACGGTTAGTTACTTTGGTAGTTATAGCGGTTTAGTTCGATGAGCCTCGCCAATGTACAGAACATCTTAGTATAACGACACGTCGGTCTGCAAATATAGAAACATCCTTTTTTTGAAAAGAAATGGTTATTTGTGTTTGTTTATAGGGTAGTTCTTTTGGGCAAAAACTCACATTCTTATTGGAGTGTTATACCCCAAAGAACATCATCCTATGTGAGTGTACG

mRNA sequence

TGGATTCGAATCCCCCACCCCTAATTTTTGTAATCTCAAAAAATTACAAAACAGTTTAGTCACTAAAGTCTAGAGAGAAATATAACGTCTTTCAGAGCTCTCTTGATTCCTTGGGAGGTTTTTGCAACACTCTAGGTCCAGGATTGGGCTCCACTCTTGTTGCTTCAAGTTAAGAAAACTTAACTTTGGAATTCTTTATGGTTGAGCTACCGAAAAGGAAGGTTTACCTTGTTGGTAAAGGTAGTAAATGAGATCTTGGAGCTGCCATTCATGGATGAGGAAATTTGGTCCAGGATTCTTGTTAATCCGAAGATCTAAGAGAAACATTCTTATTTATACTCTTTGGATTTAAGACAGAATTTTGCACAAAGTTGGTATTGGTAAAACAATATCCTTCTGGACTGATCATTGGCTTACAGGCGCTCCTTTGCATAGAAGCTTTTCTTGTCTTTACAACTTCGTTTGCAACAAGAGTGGCACTATTGAAGATTATAGTAACCAGACATGGAATTTTTCTTTTAAAAGAAGCTTAAAAGATGGTGAGATACCAGATTATGGGGCCCTTCTGCAAGTCATCTCTGATTTGACACTTTCCAATAGGAGAGACACTACCCTTTGGAAACCAGAACATGAAGGCATTTCTCCATCAAATCCCTCATGAATGATACAAATACTTCGTTTGATGAACCAACCAGTGTGTTATTCAACATCATCTAGAAAGGCAAATACCCCAAAAACATTCAATACAAATGACAGGCTGCAAAGAAGACTTCCCCACATGACCCTTCAGCCCCTATTTGTCGAAATGGGTCTGAGACTCAACGCCATCTTTTTGGAAAATGCAACTTTGCCATGGAGTTCTGCAGTCAGATTTTGCCAGCATTCAAGTGGCAGATTATCCTTCAACTTAAGTGAGTTGATTAGTGATTTAACATGATTCAACTAGAAAGTTTTGTGTCAAATCTTGTCAAGTCATTTTATCCTCAATTGATATTGATTTCTACTTGTTGGACATTTCTCTAATTTTAAGTATACAAACGAGAGCAGTGTTGTTGGTTGATATAATTTTAAGTATACAAGCGAGAGCGGTGTTGTTGGTTGATATAATTAAGTTTTACTTCAACCCATCAGCTTAAGCTCTTAGTTTAAGTTGATTGGTAATTTAATAAGGTTCAACCATTTGTATTTCCCATTCTCCTGAGCATGAGATTGAGAATATGATTTCTAACCAACCTATTATTTTTCACAAAAGGGAAAAGCATTTTTTCAGTCTTTCTGCCAAAAATGTATCAGATGGAGATGCAGTGACAAGTCTGGAAAGCATATTAAATATTAGATATGGAATCTATGGGGACAGAACGCTCGGTGCACACCTGCCTGTTGCTATAGAAGCATCTGTAACTGAATATGATAAACAGAACTTGCTCTTCAAGAGCGCTCTAGTTTTGCAAAGGCCTGTACTTCACCCTTTCCTGCCTGTTGGATTTGTTCCTCTTTCTTCCAAGGGGCTAAGAGTCGGACAGCTTATTACTATGAAATGGAGGATTGAAAGGGTAATTACTTTGCAAGAGAATGAAGATTCCACATGCAATCTTGACGATGTACTTTGCGAAATTGATGCTAAATCCGAAAACTGGATGATTGCCGGTAGGAAAAGAGGGCACGTTTCACTCTCTGCCAAGCAAGGGTCGAGAATGGTGATCTCGATATTATGTATGCCTCTGGTGGCTGGTTATGTTTGTCCACCTAAACTCGGTTTGCCAAATATCGACAAGGCGAATATAAGTTGCAATCTTGTTGCTCCACACCTGGTTTGTGTCTTACCTCCAGCACTCAGCTCCTCATTCTGTATTCCAGCATGATTGTTCTTCACACATGTTTTTCATTACCATAGTTGTTATGTTTTCCCCTCTGAATTATACAAAAGGATTCCGTCCCATCGTAAATTCGATTTGTAAAGATTCAAACTAGCTGTTACTGTTGAATCTCTTCCACTCTCCTCGGGTCAAAGATTTTTAGTCATCCTATGAGTGATTCTTGACGGTTAGTTACTTTGGTAGTTATAGCGGTTTAGTTCGATGAGCCTCGCCAATGTACAGAACATCTTAGTATAACGACACGTCGGTCTGCAAATATAGAAACATCCTTTTTTTGAAAAGAAATGGTTATTTGTGTTTGTTTATAGGGTAGTTCTTTTGGGCAAAAACTCACATTCTTATTGGAGTGTTATACCCCAAAGAACATCATCCTATGTGAGTGTACG

Coding sequence (CDS)

ATGATTTCTAACCAACCTATTATTTTTCACAAAAGGGAAAAGCATTTTTTCAGTCTTTCTGCCAAAAATGTATCAGATGGAGATGCAGTGACAAGTCTGGAAAGCATATTAAATATTAGATATGGAATCTATGGGGACAGAACGCTCGGTGCACACCTGCCTGTTGCTATAGAAGCATCTGTAACTGAATATGATAAACAGAACTTGCTCTTCAAGAGCGCTCTAGTTTTGCAAAGGCCTGTACTTCACCCTTTCCTGCCTGTTGGATTTGTTCCTCTTTCTTCCAAGGGGCTAAGAGTCGGACAGCTTATTACTATGAAATGGAGGATTGAAAGGGTAATTACTTTGCAAGAGAATGAAGATTCCACATGCAATCTTGACGATGTACTTTGCGAAATTGATGCTAAATCCGAAAACTGGATGATTGCCGGTAGGAAAAGAGGGCACGTTTCACTCTCTGCCAAGCAAGGGTCGAGAATGGTGATCTCGATATTATGTATGCCTCTGGTGGCTGGTTATGTTTGTCCACCTAAACTCGGTTTGCCAAATATCGACAAGGCGAATATAAGTTGCAATCTTGTTGCTCCACACCTGGTTTGTGTCTTACCTCCAGCACTCAGCTCCTCATTCTGTATTCCAGCATGA

Protein sequence

MISNQPIIFHKREKHFFSLSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQRPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSENWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHLVCVLPPALSSSFCIPA

Homology

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BLAST of Sed0014205 vs. NCBI nr
Match: XP_004150108.1 (trafficking protein particle complex II-specific subunit 130 homolog [Cucumis sativus] >KGN59892.1 hypothetical protein Csa_000999 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 6.8e-81
Identity = 161/196 (82.14%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 19   LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
            L   N  D   VT+ ESILNIRYGI GDRTLGAHLPV IE+S TE  KQ+LLFKSALVLQ
Sbjct: 1054 LGKTNNEDEGEVTNPESILNIRYGISGDRTLGAHLPVLIESSGTEDAKQDLLFKSALVLQ 1113

Query: 79   RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
            RPVL P L VGF+PL S+GLRVGQLITMKWRIER+  LQENEDS CNLDDVL EIDAKSE
Sbjct: 1114 RPVLDPCLTVGFLPLPSEGLRVGQLITMKWRIERLNNLQENEDSKCNLDDVLYEIDAKSE 1173

Query: 139  NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
            NWMIAGRKRGHVSLS  QGSRMVISILCMPLVAGYV PPKLGLPNID+ANISCN  APHL
Sbjct: 1174 NWMIAGRKRGHVSLSPNQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISCNPAAPHL 1233

Query: 199  VCVLPPALSSSFCIPA 215
            VCVLPP LSSSFCIPA
Sbjct: 1234 VCVLPPPLSSSFCIPA 1249

[Close]

BLAST of Sed0014205 vs. NCBI nr
Match: KAG7037391.1 (Trafficking protein particle complex II-specific subunit [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 309.3 bits (791), Expect = 2.6e-80
Identity = 162/196 (82.65%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 19   LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
            L   N  D DAVTS ESILNIRYGI GDRTLGAH PVAIE + TE  KQ+LLFKSALVLQ
Sbjct: 1052 LGKTNYEDEDAVTSPESILNIRYGISGDRTLGAHPPVAIELTGTEDAKQDLLFKSALVLQ 1111

Query: 79   RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
            RPVL P L VGF+PL S GLRVGQLITMKWRIER+ TL ENE+S CNLDDVL EIDAKSE
Sbjct: 1112 RPVLDPCLAVGFLPLPSDGLRVGQLITMKWRIERLNTLPENENSKCNLDDVLYEIDAKSE 1171

Query: 139  NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
            NWMIAGRKRG+VSLS KQGSRMVISILCMPLVAGYV PPKLGLPNID+ANIS N  APHL
Sbjct: 1172 NWMIAGRKRGYVSLSPKQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISFNPAAPHL 1231

Query: 199  VCVLPPALSSSFCIPA 215
            VCVLPPALSSSFCIPA
Sbjct: 1232 VCVLPPALSSSFCIPA 1247

[Close]

BLAST of Sed0014205 vs. NCBI nr
Match: XP_023523942.1 (trafficking protein particle complex II-specific subunit 130 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 2.6e-80
Identity = 162/196 (82.65%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 19   LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
            L   N  D DAVTS ESILNIRYGI GDRTLGAH PVAIE + TE  KQ+LLFKSALVLQ
Sbjct: 1052 LGKTNYEDEDAVTSPESILNIRYGISGDRTLGAHPPVAIELTGTEDAKQDLLFKSALVLQ 1111

Query: 79   RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
            RPVL P L VGF+PL S GLRVGQLITMKWRIER+ TL ENE+S CNLDDVL EIDAKSE
Sbjct: 1112 RPVLDPCLAVGFLPLPSDGLRVGQLITMKWRIERLNTLPENENSKCNLDDVLYEIDAKSE 1171

Query: 139  NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
            NWMIAGRKRG+VSLS KQGSRMVISILCMPLVAGYV PPKLGLPNID+ANIS N  APHL
Sbjct: 1172 NWMIAGRKRGYVSLSPKQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISFNPAAPHL 1231

Query: 199  VCVLPPALSSSFCIPA 215
            VCVLPPALSSSFCIPA
Sbjct: 1232 VCVLPPALSSSFCIPA 1247

[Close]

BLAST of Sed0014205 vs. NCBI nr
Match: XP_022940802.1 (trafficking protein particle complex II-specific subunit 130 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 309.3 bits (791), Expect = 2.6e-80
Identity = 162/196 (82.65%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 19   LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
            L   N  D DAVTS ESILNIRYGI GDRTLGAH PVAIE + TE  KQ+LLFKSALVLQ
Sbjct: 1052 LGKTNYEDEDAVTSPESILNIRYGISGDRTLGAHPPVAIELTGTEDAKQDLLFKSALVLQ 1111

Query: 79   RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
            RPVL P L VGF+PL S GLRVGQLITMKWRIER+ TL ENE+S CNLDDVL EIDAKSE
Sbjct: 1112 RPVLDPCLAVGFLPLPSDGLRVGQLITMKWRIERLNTLPENENSKCNLDDVLYEIDAKSE 1171

Query: 139  NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
            NWMIAGRKRG+VSLS KQGSRMVISILCMPLVAGYV PPKLGLPNID+ANIS N  APHL
Sbjct: 1172 NWMIAGRKRGYVSLSPKQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISFNPAAPHL 1231

Query: 199  VCVLPPALSSSFCIPA 215
            VCVLPPALSSSFCIPA
Sbjct: 1232 VCVLPPALSSSFCIPA 1247

[Close]

BLAST of Sed0014205 vs. NCBI nr
Match: XP_008454662.1 (PREDICTED: LOW QUALITY PROTEIN: trafficking protein particle complex II-specific subunit 130 homolog [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 4.4e-80
Identity = 160/196 (81.63%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 19   LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
            L   N  D   VT+ ESILNIRYGI GDRTLGAHLPV IE+S  E  KQ+LLFKSALVLQ
Sbjct: 1055 LGKTNNEDEGEVTNPESILNIRYGISGDRTLGAHLPVIIESSGIEDAKQDLLFKSALVLQ 1114

Query: 79   RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
            RPVL P L VGF+PL S+GLRVGQLITMKWRIER+  LQENEDS CNLDDVL EIDAKSE
Sbjct: 1115 RPVLDPCLTVGFLPLPSEGLRVGQLITMKWRIERLNNLQENEDSKCNLDDVLYEIDAKSE 1174

Query: 139  NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
            NWMIAGRKRGHVSLS  QGSRMVISILCMPLVAGYV PPKLGLPNID+ANISCN  APHL
Sbjct: 1175 NWMIAGRKRGHVSLSPDQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISCNPAAPHL 1234

Query: 199  VCVLPPALSSSFCIPA 215
            VCVLPP LSSSFCIPA
Sbjct: 1235 VCVLPPPLSSSFCIPA 1250

[Close]

BLAST of Sed0014205 vs. ExPASy Swiss-Prot
Match: F4K0C4 (Trafficking protein particle complex II-specific subunit 130 homolog OS=Arabidopsis thaliana OX=3702 GN=TRS130 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.1e-64
Identity = 122/189 (64.55%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 25   SDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQRPVLHP 84
            S+G  +   ESILNI+YGI+GDR  GAH PV  + S T+ + ++L+FKSA+VLQRPVL P
Sbjct: 1069 SEGKDLQLPESILNIKYGIHGDRAAGAHRPVDADHSETDTEGRDLVFKSAIVLQRPVLDP 1128

Query: 85   FLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSENWMIAG 144
             L VGF+PL S GLRVG+LITM+WR+ER+  L+E+E      D+VL E++A SENWMIAG
Sbjct: 1129 CLTVGFLPLPSDGLRVGKLITMQWRVERLKELKESEAVEQQHDEVLYEVNANSENWMIAG 1188

Query: 145  RKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHLVCVLPP 204
            RKRGHVSLS +QGSR+VISILC+PLVAGYV PP+LGLPN+++AN+S N   PHLVCVLPP
Sbjct: 1189 RKRGHVSLSEEQGSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPSGPHLVCVLPP 1248

Query: 205  ALSSSFCIP 214
             LSSS+C+P
Sbjct: 1249 LLSSSYCLP 1257

[Close]

BLAST of Sed0014205 vs. ExPASy Swiss-Prot
Match: Q2QNU0 (Trafficking protein particle complex II-specific subunit 130 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TRS130 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-56
Identity = 107/198 (54.04%), Postives = 145/198 (73.23%), Query Frame = 0


Query: 17   FSLSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALV 76
            F +    + D D +   +S+LNI+YGI GDRT GAH PV ++      D + L+FK A+ 
Sbjct: 1055 FVIRLSALGDMDELEKADSMLNIKYGISGDRTTGAHSPVPVKPD----DSEELVFKIAVK 1114

Query: 77   LQRPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAK 136
            ++RPVL P + VGF+P SS  LRVGQL+ M+WR+ER   L+  ED++   D++L ++DA 
Sbjct: 1115 MKRPVLDPCVAVGFLPFSSDCLRVGQLVNMRWRVER---LKNPEDASLLADEILYQVDAN 1174

Query: 137  SENWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAP 196
             +NWM+AGRK GHVSLS KQGSR+ I++ C+PLV+GYV PP+LGLP++ +ANISCN   P
Sbjct: 1175 PQNWMVAGRKCGHVSLSNKQGSRIEITVTCVPLVSGYVHPPQLGLPHVGEANISCNPAGP 1234

Query: 197  HLVCVLPPALSSSFCIPA 215
            HLVCVLPP LS+S+CIPA
Sbjct: 1235 HLVCVLPPTLSTSYCIPA 1245

[Close]

BLAST of Sed0014205 vs. ExPASy TrEMBL
Match: A0A0A0LGE1 (Foie-gras_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G851920 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.3e-81
Identity = 161/196 (82.14%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 19   LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
            L   N  D   VT+ ESILNIRYGI GDRTLGAHLPV IE+S TE  KQ+LLFKSALVLQ
Sbjct: 1054 LGKTNNEDEGEVTNPESILNIRYGISGDRTLGAHLPVLIESSGTEDAKQDLLFKSALVLQ 1113

Query: 79   RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
            RPVL P L VGF+PL S+GLRVGQLITMKWRIER+  LQENEDS CNLDDVL EIDAKSE
Sbjct: 1114 RPVLDPCLTVGFLPLPSEGLRVGQLITMKWRIERLNNLQENEDSKCNLDDVLYEIDAKSE 1173

Query: 139  NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
            NWMIAGRKRGHVSLS  QGSRMVISILCMPLVAGYV PPKLGLPNID+ANISCN  APHL
Sbjct: 1174 NWMIAGRKRGHVSLSPNQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISCNPAAPHL 1233

Query: 199  VCVLPPALSSSFCIPA 215
            VCVLPP LSSSFCIPA
Sbjct: 1234 VCVLPPPLSSSFCIPA 1249

[Close]

BLAST of Sed0014205 vs. ExPASy TrEMBL
Match: A0A6J1FKM3 (trafficking protein particle complex II-specific subunit 130 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446289 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.3e-80
Identity = 162/196 (82.65%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 19   LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
            L   N  D DAVTS ESILNIRYGI GDRTLGAH PVAIE + TE  KQ+LLFKSALVLQ
Sbjct: 1052 LGKTNYEDEDAVTSPESILNIRYGISGDRTLGAHPPVAIELTGTEDAKQDLLFKSALVLQ 1111

Query: 79   RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
            RPVL P L VGF+PL S GLRVGQLITMKWRIER+ TL ENE+S CNLDDVL EIDAKSE
Sbjct: 1112 RPVLDPCLAVGFLPLPSDGLRVGQLITMKWRIERLNTLPENENSKCNLDDVLYEIDAKSE 1171

Query: 139  NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
            NWMIAGRKRG+VSLS KQGSRMVISILCMPLVAGYV PPKLGLPNID+ANIS N  APHL
Sbjct: 1172 NWMIAGRKRGYVSLSPKQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISFNPAAPHL 1231

Query: 199  VCVLPPALSSSFCIPA 215
            VCVLPPALSSSFCIPA
Sbjct: 1232 VCVLPPALSSSFCIPA 1247

[Close]

BLAST of Sed0014205 vs. ExPASy TrEMBL
Match: A0A5D3B7T9 (Trafficking protein particle complex II-specific subunit 130-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002210 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 160/196 (81.63%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 19  LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
           L   N  D   VT+ ESILNIRYGI GDRTLGAHLPV IE+S  E  KQ+LLFKSALVLQ
Sbjct: 77  LGKTNNEDEGEVTNPESILNIRYGISGDRTLGAHLPVIIESSGIEDAKQDLLFKSALVLQ 136

Query: 79  RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
           RPVL P L VGF+PL S+GLRVGQLITMKWRIER+  LQENEDS CNLDDVL EIDAKSE
Sbjct: 137 RPVLDPCLTVGFLPLPSEGLRVGQLITMKWRIERLNNLQENEDSKCNLDDVLYEIDAKSE 196

Query: 139 NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
           NWMIAGRKRGHVSLS  QGSRMVISILCMPLVAGYV PPKLGLPNID+ANISCN  APHL
Sbjct: 197 NWMIAGRKRGHVSLSPDQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISCNPAAPHL 256

Query: 199 VCVLPPALSSSFCIPA 215
           VCVLPP LSSSFCIPA
Sbjct: 257 VCVLPPPLSSSFCIPA 272

[Close]

BLAST of Sed0014205 vs. ExPASy TrEMBL
Match: A0A5A7T3Z4 (Trafficking protein particle complex II-specific subunit 130-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001520 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 160/196 (81.63%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 19  LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
           L   N  D   VT+ ESILNIRYGI GDRTLGAHLPV IE+S  E  KQ+LLFKSALVLQ
Sbjct: 573 LGKTNNEDEGEVTNPESILNIRYGISGDRTLGAHLPVIIESSGIEDAKQDLLFKSALVLQ 632

Query: 79  RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
           RPVL P L VGF+PL S+GLRVGQLITMKWRIER+  LQENEDS CNLDDVL EIDAKSE
Sbjct: 633 RPVLDPCLTVGFLPLPSEGLRVGQLITMKWRIERLNNLQENEDSKCNLDDVLYEIDAKSE 692

Query: 139 NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
           NWMIAGRKRGHVSLS  QGSRMVISILCMPLVAGYV PPKLGLPNID+ANISCN  APHL
Sbjct: 693 NWMIAGRKRGHVSLSPDQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISCNPAAPHL 752

Query: 199 VCVLPPALSSSFCIPA 215
           VCVLPP LSSSFCIPA
Sbjct: 753 VCVLPPPLSSSFCIPA 768

[Close]

BLAST of Sed0014205 vs. ExPASy TrEMBL
Match: A0A1S3BZ53 (LOW QUALITY PROTEIN: trafficking protein particle complex II-specific subunit 130 homolog OS=Cucumis melo OX=3656 GN=LOC103495014 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 160/196 (81.63%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 19   LSAKNVSDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQ 78
            L   N  D   VT+ ESILNIRYGI GDRTLGAHLPV IE+S  E  KQ+LLFKSALVLQ
Sbjct: 1055 LGKTNNEDEGEVTNPESILNIRYGISGDRTLGAHLPVIIESSGIEDAKQDLLFKSALVLQ 1114

Query: 79   RPVLHPFLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSE 138
            RPVL P L VGF+PL S+GLRVGQLITMKWRIER+  LQENEDS CNLDDVL EIDAKSE
Sbjct: 1115 RPVLDPCLTVGFLPLPSEGLRVGQLITMKWRIERLNNLQENEDSKCNLDDVLYEIDAKSE 1174

Query: 139  NWMIAGRKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHL 198
            NWMIAGRKRGHVSLS  QGSRMVISILCMPLVAGYV PPKLGLPNID+ANISCN  APHL
Sbjct: 1175 NWMIAGRKRGHVSLSPDQGSRMVISILCMPLVAGYVRPPKLGLPNIDEANISCNPAAPHL 1234

Query: 199  VCVLPPALSSSFCIPA 215
            VCVLPP LSSSFCIPA
Sbjct: 1235 VCVLPPPLSSSFCIPA 1250

[Close]

BLAST of Sed0014205 vs. TAIR 10
Match: AT5G54440.1 (CLUB )

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-65
Identity = 122/189 (64.55%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 25   SDGDAVTSLESILNIRYGIYGDRTLGAHLPVAIEASVTEYDKQNLLFKSALVLQRPVLHP 84
            S+G  +   ESILNI+YGI+GDR  GAH PV  + S T+ + ++L+FKSA+VLQRPVL P
Sbjct: 1069 SEGKDLQLPESILNIKYGIHGDRAAGAHRPVDADHSETDTEGRDLVFKSAIVLQRPVLDP 1128

Query: 85   FLPVGFVPLSSKGLRVGQLITMKWRIERVITLQENEDSTCNLDDVLCEIDAKSENWMIAG 144
             L VGF+PL S GLRVG+LITM+WR+ER+  L+E+E      D+VL E++A SENWMIAG
Sbjct: 1129 CLTVGFLPLPSDGLRVGKLITMQWRVERLKELKESEAVEQQHDEVLYEVNANSENWMIAG 1188

Query: 145  RKRGHVSLSAKQGSRMVISILCMPLVAGYVCPPKLGLPNIDKANISCNLVAPHLVCVLPP 204
            RKRGHVSLS +QGSR+VISILC+PLVAGYV PP+LGLPN+++AN+S N   PHLVCVLPP
Sbjct: 1189 RKRGHVSLSEEQGSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPSGPHLVCVLPP 1248

Query: 205  ALSSSFCIP 214
             LSSS+C+P
Sbjct: 1249 LLSSSYCLP 1257

The following BLAST results are available for this feature:

BLAST of Sed0014205 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150108.1	6.8e-81	82.14	trafficking protein particle complex II-specific subunit 130 homolog [Cucumis sa...	[more]
KAG7037391.1	2.6e-80	82.65	Trafficking protein particle complex II-specific subunit [Cucurbita argyrosperma...	[more]
XP_023523942.1	2.6e-80	82.65	trafficking protein particle complex II-specific subunit 130 homolog isoform X1 ...	[more]
XP_022940802.1	2.6e-80	82.65	trafficking protein particle complex II-specific subunit 130 homolog isoform X1 ...	[more]
XP_008454662.1	4.4e-80	81.63	PREDICTED: LOW QUALITY PROTEIN: trafficking protein particle complex II-specific...	[more]

BLAST of Sed0014205 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K0C4	2.1e-64	64.55	Trafficking protein particle complex II-specific subunit 130 homolog OS=Arabidop...	[more]
Q2QNU0	2.1e-56	54.04	Trafficking protein particle complex II-specific subunit 130 homolog OS=Oryza sa...	[more]

BLAST of Sed0014205 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGE1	3.3e-81	82.14	Foie-gras_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G851920...	[more]
A0A6J1FKM3	1.3e-80	82.65	trafficking protein particle complex II-specific subunit 130 homolog isoform X1 ...	[more]
A0A5D3B7T9	2.1e-80	81.63	Trafficking protein particle complex II-specific subunit 130-like protein OS=Cuc...	[more]
A0A5A7T3Z4	2.1e-80	81.63	Trafficking protein particle complex II-specific subunit 130-like protein OS=Cuc...	[more]
A0A1S3BZ53	2.1e-80	81.63	LOW QUALITY PROTEIN: trafficking protein particle complex II-specific subunit 13...	[more]

BLAST of Sed0014205 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54440.1	1.5e-65	64.55	CLUB	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022233	TRAPP II complex TRAPPC10, C-terminal	PFAM	PF12584	TRAPPC10	coord: 95..154 e-value: 8.9E-6 score: 25.5
IPR045126	Trafficking protein particle complex subunit TRAPPC10/Trs130	PANTHER	PTHR13251	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1	coord: 16..157
None	No IPR available	PANTHER	PTHR13251:SF5	BNAC09G30770D PROTEIN	coord: 16..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014205.1	Sed0014205.1	mRNA
Sed0014205.2	Sed0014205.2	mRNA
Sed0014205.3	Sed0014205.3	mRNA
Sed0014205.4	Sed0014205.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000919	cell plate assembly
biological_process	GO:0034498	early endosome to Golgi transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0048193	Golgi vesicle transport
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:1990071	TRAPPII protein complex