Sed0014112 (gene) Chayote v1

Overview


Name	Sed0014112
Type	gene
Organism	Sechium edule (Chayote v1)
Description	major pollen allergen Ole e 6-like
Location	LG09: 6307680 .. 6309000 (+)
RNA-Seq Expression	Sed0014112
Synteny	Sed0014112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGAAAATGTTTGCAGTGTTTTTTATGTGCATTATGGTTGTGGCTGCACTTCAATTTTGCACCGCCAACGCTGATGAGAAAGAGGCCAAATGGGAGGCCAAATTTGACACCAAGTTTAAATCTTGCTATGAAACTTGCGAGAAGGAATGTATTCAAAAGGGCAATGGCCAAAGCTTTTGTGAAGTTAAATGCGATGAAGATTGCGGCGAAAAGGAAGTTGCAGGTACGTCTTTTGGCTCGGCCTCGGGCTCCTCGGGCTCTAATTAACTCGAAAACAAATTGATAAGTTGACATAAATTTAATTGTATCAAATAATTATTCTCTTACATGTAAATTTAGAAAATTTTGAAAATTTAAAAATGATCAACAAGTGGAGTATAATTAGACCTCATATAAATCATATATGTTTATGAGTAAGAGTTAGTTTTATTATTAACTTCGTTATACTACTCTTTTTTAAAAAAATAAAAAGAATAATAACTACGTTACACTCAAATACCATATTGGGGACTTCATTTGTTGAATATATATATATATATATATATATATATATAACACATTTTAAAAAATAATTATATGTTGCAAAAAAATGAGAATGTCTATACAAAAATTATTAAAATGTCTATGTTTCAACCAGTTGATTGATAACCGTTTATTAATTTATTGATAGATTCAATCCTTTAGAAGGGCAGAAAGATAGAATGAGTGTATGAAAAAAATGCAAGTGCATTTTGTTATAAACAAATATTTTGAAAAAAAGATTATTATTATAATATGTGGTCTAAAAATTACAGTTTTTTTTATTAATTACAAAAGTTTAAGCTAATAATAATAAATTGGAGTTTAGAGTATTAAGCATTATGATGTAGCCTCCATTTGCATAAATTGGAGTTTTTTTGTTTTTTGGTATGCTTTTTGGAACTAAAATCTCTTTCCAAAATATTTTTTTATGAATTTGAGTTCACATAATCATATGTTTAGGAGAAACATTCACATTTTCATTATATCATACAAATTCTAAATCACATGAGAAAAATATTAATATTACAAATGTGGACATAATTTAAACGATAAAAATTATAACTTATTTAAAAGACTCATGTTCTTATTTGTAGATTTTTTTTTTTTTTTTGTGAATTTCTTAATTCTTAAAAGACTCAAGAAATTTGTACCCATGTCAATATTTAAAAAGAGGGAAACAATAATGAATGATTGTTGCTTATTATGATTTTTTTTCCTTAAATTTTCTCATGTTAATTTAAATTATTATATATTTTGTTTTACAGATAAGCTTCACATCGGGCTGGTACATTGA

mRNA sequence

ATGGCCAAGAAAATGTTTGCAGTGTTTTTTATGTGCATTATGGTTGTGGCTGCACTTCAATTTTGCACCGCCAACGCTGATGAGAAAGAGGCCAAATGGGAGGCCAAATTTGACACCAAGTTTAAATCTTGCTATGAAACTTGCGAGAAGGAATGTATTCAAAAGGGCAATGGCCAAAGCTTTTGTGAAGTTAAATGCGATGAAGATTGCGGCGAAAAGGAAGTTGCAGATAAGCTTCACATCGGGCTGGTACATTGA

Coding sequence (CDS)

ATGGCCAAGAAAATGTTTGCAGTGTTTTTTATGTGCATTATGGTTGTGGCTGCACTTCAATTTTGCACCGCCAACGCTGATGAGAAAGAGGCCAAATGGGAGGCCAAATTTGACACCAAGTTTAAATCTTGCTATGAAACTTGCGAGAAGGAATGTATTCAAAAGGGCAATGGCCAAAGCTTTTGTGAAGTTAAATGCGATGAAGATTGCGGCGAAAAGGAAGTTGCAGATAAGCTTCACATCGGGCTGGTACATTGA

Protein sequence

MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQSFCEVKCDEDCGEKEVADKLHIGLVH

Homology

[Close]

BLAST of Sed0014112 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-28
Identity = 66/85 (77.65%), Postives = 73/85 (85.88%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKKM AVF MCI+V+AALQF TAN  E+ AK+EAKFD K+KSCYETCEKEC++KGNGQS
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTAN--EEVAKYEAKFDAKYKSCYETCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHIGLVH 86
          FCEVKCDEDC EKE ADKLHI   H
Sbjct: 61 FCEVKCDEDCDEKETADKLHIKPAH 83

[Close]

BLAST of Sed0014112 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 133.3 bits (334), Expect = 1.0e-27
Identity = 66/83 (79.52%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKKM AVF MCI+VVAALQF TAN DE   K+EAKFD K+KSCYETCEKEC+  G+GQS
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDE-VTKYEAKFDAKYKSCYETCEKECLANGSGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHIGL 84
          FCEVKCDEDC EKEVADKLHI L
Sbjct: 61 FCEVKCDEDCDEKEVADKLHIKL 82

[Close]

BLAST of Sed0014112 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 2.9e-27
Identity = 60/83 (72.29%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKKM A+F MCI+VVAALQF +AN +++ AK+EAKFD K+KSC++TCEKEC++ G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHIGL 84
          +CEVKCDEDC EKEVADKLHI L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Sed0014112 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 129.4 bits (324), Expect = 1.5e-26
Identity = 63/83 (75.90%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKKM AVFFMCI+V+AALQF TAN  E+  K+EAKFD K+KSCYETCEKEC++ G+GQ+
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATAN--EEVDKYEAKFDAKYKSCYETCEKECLENGSGQT 60

Query: 61 FCEVKCDEDCGEKEVADKLHIGL 84
          FCEVKCDEDC EKE ADKLHI L
Sbjct: 61 FCEVKCDEDCDEKEKADKLHIEL 81

[Close]

BLAST of Sed0014112 vs. NCBI nr
Match: XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 3.2e-26
Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKK+ AVFFMCI+V+AA QF TAN  E+  K+EAKF+ K+KSCYETCEKEC++ GNGQS
Sbjct: 1  MAKKIIAVFFMCIVVMAAFQFATAN--EEVEKYEAKFEAKYKSCYETCEKECLEGGNGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHIGL 84
          FCEVKCDEDC EKE ADKLHI L
Sbjct: 61 FCEVKCDEDCDEKETADKLHIEL 81

[Close]

BLAST of Sed0014112 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 38 DTKFKSCYETCEKECIQKGNGQSFCEVKCDEDCGEKEVADKL 80
          + +FK CY+TC KEC  KGNG +FCE+KCD DC  K+V +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]

BLAST of Sed0014112 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27
Identity = 60/83 (72.29%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKKM A+F MCI+VVAALQF +AN +++ AK+EAKFD K+KSC++TCEKEC++ G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHIGL 84
          +CEVKCDEDC EKEVADKLHI L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Sed0014112 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27
Identity = 60/83 (72.29%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKKM A+F MCI+VVAALQF +AN +++ AK+EAKFD K+KSC++TCEKEC++ G+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHIGL 84
          +CEVKCDEDC EKEVADKLHI L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Sed0014112 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.0e-26
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKKM AV  +CI+VVAALQ  +A    KEAK+EAKF+ K++ CYE CEKEC++KGNGQS
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHI 82
          FCEVKCDEDCGEKE ADKLHI
Sbjct: 61 FCEVKCDEDCGEKEAADKLHI 81

[Close]

BLAST of Sed0014112 vs. ExPASy TrEMBL
Match: A0A6J1JXL5 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-25
Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKGNGQS 60
          MAKKM AV  +CI+V+AALQ  +A    KEAK+EAKF+ K++ CYE CEKEC++KGNGQS
Sbjct: 1  MAKKMIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHI 82
          FCEVKCDEDCGEKE ADKLHI
Sbjct: 61 FCEVKCDEDCGEKEAADKLHI 81

[Close]

BLAST of Sed0014112 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-25
Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 1  MAKKMFAVFFMCIMVVAALQFCTANADEKEAKWEAKFDTKFKSCYETCEKECIQKG-NGQ 60
          MAKKM AVF MCI+VVA LQF  AN ++   K+EAKFD K+KSCYETCEKEC++   NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCGEKEVADKLHIGL 84
          SFCEVKCDEDC EKE ADKLHI L
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIEL 84

The following BLAST results are available for this feature:

BLAST of Sed0014112 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906682.1	2.7e-28	77.65	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038891517.1	1.0e-27	79.52	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_008456958.1	2.9e-27	72.29	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]
XP_038875643.1	1.5e-26	75.90	major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol...	[more]
XP_038906677.1	3.2e-26	74.70	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]

BLAST of Sed0014112 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	1.3e-09	59.52	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of Sed0014112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCS2	1.4e-27	72.29	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	1.4e-27	72.29	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A6J1EQ21	6.0e-26	72.84	major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354...	[more]
A0A6J1JXL5	1.7e-25	71.60	major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 P...	[more]
A0A0A0K9Z9	5.1e-25	71.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]

BLAST of Sed0014112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 44..80 e-value: 1.8E-13 score: 50.2
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..82
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 37..81 e-value: 3.2E-17 score: 63.8
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 38..79
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014112.1	Sed0014112.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016121	carotene catabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen