Sed0014070 (gene) Chayote v1

Overview


Name	Sed0014070
Type	gene
Organism	Sechium edule (Chayote v1)
Description	major pollen allergen Ole e 6-like
Location	LG09: 6293897 .. 6294721 (+)
RNA-Seq Expression	Sed0014070
Synteny	Sed0014070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGAAAATGATTGCAGTGTTTCTTGTATGCATTGTGGTGGTGGCTGCATTGCAATTTTCTAGTGCCAATAATGTTGAGGAAATAGAGGCCAAATTTGATGCTAGATTCAAGTCTTGCTTCAATTCTTGTGAGAAGGAATGCCTTGCCAATGCCAAAGGTCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCAGGTATACTCTTTCTTTCCTCGTTAAAATATCATTTTGATCTCTGTATTTTGAGTTTAATTTTTGTTGTTAGGTTTTCAAATGTATAATCGATAGTTTCTATAGTTGAAGATAGCAAATATAGTCATTGGTATTAATAAGCATTGTCACATATTCTCTTAATATTAAAAAGTACTAGTGATTTTGAGAGTAAATACATTAAAATTTACCTAAATTTATAATTATTGTGAAAGTAGCTTATTCAATACAATTTCTCATACTTTAAAAAGAAGTTGAATTTGGTGTTTATAGGTTCAAAAGTTAGAAGTCTCTTTAATTTTATAAAATCTAAAAATTAGTCGATTAATTATATACATTTTTTTAATTCAATAACATTTGGAACTGAACATGTAACCTATTGATATTATTTAATATATAATGTCAATAGAGTACTACTTACTTTAGCAAAGTTGTTATTATTAAAGAATTGCCCGATTATTGATCAATTATCAACTGTGTTTTATTTATAAATTCTAAAAAAAAAAATCAACTGTTTTTTTTAATCTCCCATTAATTTAAATTGTTGTATTTGATTTGCAGATAAGTTGAATATCAAGCTACCACAATGA

mRNA sequence

ATGGCTAAGAAAATGATTGCAGTGTTTCTTGTATGCATTGTGGTGGTGGCTGCATTGCAATTTTCTAGTGCCAATAATGTTGAGGAAATAGAGGCCAAATTTGATGCTAGATTCAAGTCTTGCTTCAATTCTTGTGAGAAGGAATGCCTTGCCAATGCCAAAGGTCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCAGATAAGTTGAATATCAAGCTACCACAATGA

Coding sequence (CDS)

ATGGCTAAGAAAATGATTGCAGTGTTTCTTGTATGCATTGTGGTGGTGGCTGCATTGCAATTTTCTAGTGCCAATAATGTTGAGGAAATAGAGGCCAAATTTGATGCTAGATTCAAGTCTTGCTTCAATTCTTGTGAGAAGGAATGCCTTGCCAATGCCAAAGGTCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCAGATAAGTTGAATATCAAGCTACCACAATGA

Protein sequence

MAKKMIAVFLVCIVVVAALQFSSANNVEEIEAKFDARFKSCFNSCEKECLANAKGQSFCEVKCDEDCDEKEVADKLNIKLPQ

Homology

[Close]

BLAST of Sed0014070 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25
Identity = 64/82 (78.05%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSAN--NVEEIEAKFDARFKSCFNSCEKECLANAKGQSF 60
          MAKKM+AVFL+CIVVVAALQF++AN   V + EAKFDA++KSC+ +CEKECLAN  GQSF
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSF 60

Query: 61 CEVKCDEDCDEKEVADKLNIKL 81
          CEVKCDEDCDEKEVADKL+IKL
Sbjct: 61 CEVKCDEDCDEKEVADKLHIKL 82

[Close]

BLAST of Sed0014070 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 7.7e-25
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSANNVEEI---EAKFDARFKSCFNSCEKECLANAKGQS 60
          MAKKMIA+FL+CIVVVAALQF+SAN  +E+   EAKFDA++KSCF +CEKECL N  GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKEVADKLNIKL 81
          +CEVKCDEDC+EKEVADKL+I+L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Sed0014070 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 59/81 (72.84%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSAN-NVEEIEAKFDARFKSCFNSCEKECLANAKGQSFC 60
          MAKKMIAVF +CIVV+AALQF++AN  V++ EAKFDA++KSC+ +CEKECL N  GQ+FC
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATANEEVDKYEAKFDAKYKSCYETCEKECLENGSGQTFC 60

Query: 61 EVKCDEDCDEKEVADKLNIKL 81
          EVKCDEDCDEKE ADKL+I+L
Sbjct: 61 EVKCDEDCDEKEKADKLHIEL 81

[Close]

BLAST of Sed0014070 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSAN-NVEEIEAKFDARFKSCFNSCEKECLANAKGQSFC 60
          MAKKMIAVFL+CIVV+AALQF++AN  V + EAKFDA++KSC+ +CEKECL    GQSFC
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTANEEVAKYEAKFDAKYKSCYETCEKECLEKGNGQSFC 60

Query: 61 EVKCDEDCDEKEVADKLNIK 80
          EVKCDEDCDEKE ADKL+IK
Sbjct: 61 EVKCDEDCDEKETADKLHIK 80

[Close]

BLAST of Sed0014070 vs. NCBI nr
Match: XP_038906482.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 117.5 bits (293), Expect = 5.5e-23
Identity = 58/81 (71.60%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSAN-NVEEIEAKFDARFKSCFNSCEKECLANAKGQSFC 60
          MAKK+IA+FL+CIVV+ ALQF +AN  V++ EAKF+A++KSC+ +CEKECL N+ GQSFC
Sbjct: 1  MAKKIIAMFLMCIVVMGALQFGTANEEVDKYEAKFEAKYKSCYETCEKECLQNSNGQSFC 60

Query: 61 EVKCDEDCDEKEVADKLNIKL 81
          EVKCDEDCDEKEVADKL+I L
Sbjct: 61 EVKCDEDCDEKEVADKLHIGL 81

[Close]

BLAST of Sed0014070 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.9e-07
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 35 DARFKSCFNSCEKECLANAKGQSFCEVKCDEDCDEKEVADKLNIKLPQ 83
          +A+FK C+++C KEC     G +FCE+KCD DC  K+V +KL    P+
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLENYKPK 49

[Close]

BLAST of Sed0014070 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-25
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSANNVEEI---EAKFDARFKSCFNSCEKECLANAKGQS 60
          MAKKMIA+FL+CIVVVAALQF+SAN  +E+   EAKFDA++KSCF +CEKECL N  GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKEVADKLNIKL 81
          +CEVKCDEDC+EKEVADKL+I+L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Sed0014070 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-25
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSANNVEEI---EAKFDARFKSCFNSCEKECLANAKGQS 60
          MAKKMIA+FL+CIVVVAALQF+SAN  +E+   EAKFDA++KSCF +CEKECL N  GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKEVADKLNIKL 81
          +CEVKCDEDC+EKEVADKL+I+L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

[Close]

BLAST of Sed0014070 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.6e-23
Identity = 59/82 (71.95%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSAN--NVEEIEAKFDARFKSCFNSCEKECLANAKGQSF 60
          MA KMIA+FL+CIVVVAALQF++AN  +V + EAKFDA++KSCF +CEKECL    GQS+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCDEKEVADKLNIKL 81
          CEVKCDEDCDEKE ADKL+I+L
Sbjct: 61 CEVKCDEDCDEKEAADKLHIEL 82

[Close]

BLAST of Sed0014070 vs. ExPASy TrEMBL
Match: A0A5D3DM52 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002640 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.3e-21
Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 1  MAKKMIAVFLVCIVVVAALQFSSANNVE---EIEAKFDARFKSCFNSCEKECLANA-KGQ 60
          MAKKM+ V L+CIVV+AAL+FS AN  E   + E+KFDA++KSC+ SCEKECL N   GQ
Sbjct: 1  MAKKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQ 60

Query: 61 SFCEVKCDEDCDEKEVADKLNI 79
          SFCEVKCDEDCDEKEVADKL I
Sbjct: 61 SFCEVKCDEDCDEKEVADKLRI 82

[Close]

BLAST of Sed0014070 vs. ExPASy TrEMBL
Match: A0A1S4E2K0 (carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=CCD7 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.3e-21
Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 1   MAKKMIAVFLVCIVVVAALQFSSANNVE---EIEAKFDARFKSCFNSCEKECLANA-KGQ 60
           MAKKM+ V L+CIVV+AAL+FS AN  E   + E+KFDA++KSC+ SCEKECL N   GQ
Sbjct: 584 MAKKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQ 643

Query: 61  SFCEVKCDEDCDEKEVADKLNI 79
           SFCEVKCDEDCDEKEVADKL I
Sbjct: 644 SFCEVKCDEDCDEKEVADKLRI 665

The following BLAST results are available for this feature:

BLAST of Sed0014070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891517.1	1.2e-25	78.05	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_008456958.1	7.7e-25	74.70	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]
XP_038875643.1	1.5e-23	72.84	major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol...	[more]
XP_038906682.1	1.5e-23	75.00	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038906482.1	5.5e-23	71.60	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]

BLAST of Sed0014070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	9.9e-07	45.83	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of Sed0014070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCS2	3.7e-25	74.70	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	3.7e-25	74.70	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A0A0KPA7	4.6e-23	71.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]
A0A5D3DM52	4.3e-21	70.73	Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4E2K0	4.3e-21	70.73	carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 OS=Cucumis melo OX=3...	[more]

BLAST of Sed0014070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 35..81 e-value: 2.0E-16 score: 61.2
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 35..77
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 41..77 e-value: 1.6E-11 score: 43.9
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..80
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014070.1	Sed0014070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016121	carotene catabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen