Sed0013989 (gene) Chayote v1

Overview


Name	Sed0013989
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG03: 17378596 .. 17392093 (+)
RNA-Seq Expression	Sed0013989
Synteny	Sed0013989

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCTAACTTTTTTCTTTCTTTTCCTTTTCGAAAGCTTTTTCTGTCAAAAGAAAGAAAAGAAAGTGTGAAATTGAAAAAGAGAGAGAGAGGAAACCATTATAATGGCGGACCCGGAGCAGTGGTGAAAGCGCTTTGCAATTCCAACGATTCATTCATAAACAATCATTAATCACATATCCCTTTTTGTTCGAATTCGAAATCCGAGAAGATTTACGCGCAACCCAGTTCCGGCTCTCGTGGGATGCAGGTTTTGTTTTCTGAATCCCCTTTTTTGAATTCCATTTTAGTTTTGTTTTTAATTTCGTATCGATTTTTCCACTTTTGAGCCACACCCAGAATTTATTTTTCGGATTGATCGTCTGTTTCTGCAATTGGGCTCCGATTTGTGAACTGGGGATACGTGTTCTTTTGTTTGTTTTGTATATTTTCTTCGGCCTGTTGTTGGTTTTCGTGGTGTTCTGTTTTTCTTTATGGAGACTTGCAAATGGGGTTCTTGTTTTGTTTTGATTTTCTAATTGGAGAAATCGTTTGCCATTTTGTAATTTGTGAAATGGGAGGAACAGGTTTTTCGATTTGTGCTGCCTGGTCTGGTTTCTTTTCAATTTCAAGCCATTTTTAAGGATTTTTTTCTTTTTTCAGTAGGTGTGTTAGTTTTTAATCAATGATTTTTTTTTCCTTTTAAGTGGAAATCGGAGCTTCGCTATAGGTGAGTTAACGAGTCCTGTCCCTAGGCTAGACAACGAGAGATATCGAATGAGAGGTGTCTACAAATTAATGTAGAACCTAAGACACGGGAGTACACCTTCTGAGCCTTCGGCTACCGCGCCACCCTTGGGCACAGTTTTTAATAAATGATTTTTGGAATTTGAGAGAAATAGAGTTGTTGTTTAGATTGGCATATGAATTGATGCTGGATTGTTTTACTATGTTCCTCTGGATGGATTCAAATGAGCCAATGATTTCATTCGGTCATTTATCTCCATATTTTTTAGAGCCTACGTTTCCTTTTTCTATAGAAGATGAAGCCATTATGCATATTTTTATTCATGCTTTGTTGCTTTACTACTTTTCTTTTTTCTTTTTCTCACCGAGAACAAAATTATTTGAGTTACATTACTCTACGATGTTTCGTTTTGTGTTCATGATTGAACATCTTTATACTTGCTAAACTGCAATTGTAGGCATTGTATGTTTTTTCTTGTTCATTTTTTTTTATGGGGAAAAATTGTTTAAAAAAAATTCGGGGGTAAAATCTTACATAGCCCCATTTGATAACCATTTCATTTTTAGTTTTCTGTTTTTGTTTTTAATATTTTAAAAGTAGGTTTATTTGATGAGCAATTTTGATTTTTGTTTGTAAAATTTTAAAAACGTTTTAAAAATATTAAAGGAATTATCTTTTAAAAACAAGTTTTGTTTTCGTTTAAAAAAAAAGCATTAAAACATAAAAAAAATAGTAAAAAACTAAAAAAATCAAAATAAAATGTAATGTTTGAAAACAAAAAACAGTTATCAAACATGTTTTTTGATTTTTAGTTTTTTAAAACATAAAACTAAAATCAGGTATCAAACATATACTTTTTTAAAAAAAACTAAAAACCAAAAATGAAAAACTAGAAACAAAAGAAAAAAAAAACGTGGTTATCAAACGGGACCTAACCTTTTTGTTTTTGGAAAAAGAAACATTTCATTGAGGTATGAAATAAAGCGGTCAAACCTCAAGGGCAAAAACCAATACAAAAAAGTTCTCCAATTGGAGAGAAACAAATCTAAATTGTAAACACTCAGCAAGGCAATATGCTTGCACCAAAACTGAATTTCCCTGACACATAAAACAACAATTGGGAGAAAGAGACATATAAGGCACGTTGTTGAAGACGTTCAAAGGTGTTTACAGCTCCCAAACTCAACTCCCATAAGAAAAACTTGATCTTCTTCGGATAGGCGTCCCTCCAAATGATAGAATAAATATTATCTTTTTTCAAAGAAGGTTCTGCCATCATACTGACAGAAATAGATTTAACAGAAAAAGTTCGAGAGGGATCAATAGGCCAAACCCATGAATCAAGTGTCTTTGATAACAACACGCCATCTAAATAAGAAGATAAAGAAGCCCACTCAAGAGACTCTAGATCTGTCAAATTCCTAGCCAAAAAAGTACCATTCCACGCATCGGCCACACAAACATCTAACCGTTTTGTTTTAATATACACTTCCGATTTTAAAATTGAAGAGGGGGTAATTTCTTAATCGTTGATGTATAATTCTTTGAAGGTTAAAATACACGTCATATGACCTTTGTGTTTGTTCCATTTTGGTCTCTACACTTATGGTATTGGTTACATTTTGGACTCTACACTTTGGTATTGTTACATTTGGTCACTGGATTTTGAAATATCCCATTTTAGGCTAAAAAATCATCTTTATTGTTTGAATGAAGTTAGTTTTCCGTTACTTAGAGATAAAATAGATTTAAAAAAAAAACAATTCTCCCTCTTAAGTCCTCTCATCATTCTTTCTCTTTCCCAACCTTTCTCTCTCTTCAACCTTCTCTCTCCTCACCCTTCCTTCTCTTTCTTGGACTTTTAAGGATGGTAGTGGAAGAGAAAATAATAAAGGATGAAAAGAGAGAAGGGTTGGGGAAAGACCGAAAGAGAAAGAATGAAGGGATTGAGGAGGGAGAAGCTTTTTCTTAAAATATCTATTTCACCTCAAAGTAATAGAAAGTTAACTAATTCTAATAGCAGGGACCATTTTTGAGTTTCATGAAATTGGGAGACTAAAATTAGACATTTCAAAGTCTAGACACCAAAATGGAACAAACGCCAACATTCATTTTAACCTTTTTTGAATTTAAGATTGCACCCTCCTTTGTTCTTGTCTGATTGGCTTTACCTCGGGTTCTTTTATTATTATGAAAAAATGAAAAATAATGATTTCGTGTCAGTTTGTGGGTAGAGGGACTAAAGACTTGTTTTTTGTGCATGGGAAAGTTTATAGAATAACTTAAGTCCCCGGAGATGACTAATATTTTGATATGGTCTGTCATATTAGACAGACCATAGTATGCAGACCTGTTTTATTTGGGGTTTTTACAATTCTTATGGGTTTGTAAGGTATGTGGATAGCCTTCTTCTTATCTCATCAAGGCTTACAACTCAAGAGTGCATCAAACTAAATAAATCTGAAGTTGATCTTTTAGTGTTTTAAGCACTTTTGCCCATAAAAGCCAGGATGTGGCCTGACATAATCCAAAGCTAAGAAAAGGTGTTAAACTCATAGTTTTGAGTTGTAATTCGGAGCTTATATGCTTGGATTGTAAAAAATAATGGGTTGTAAAAGGTTGATGCTTGTATAACGTATAATTAGTGTTTGCTCTGTTGAAATCTATGAACATATATGTCAATGTATTATGTAGTTTAAATGGTGGGTTCCTAACTCTGTATAATTTATAACATTAGTGAACTTATAGAATCAGGTTATGTCAGTGTCATTTGTCCTAACCTATGGCATATATGTCAACATTTACCATTTTGGATTAAAAAAAGAGAGAGGGTTTTGCCATGTCTTTCGTTATTAAGTGTTGTTGACCAAATGGCAAAATATTGCCTACCTGGTTTGACCTAATGGTCAAGATGATCTTAGGGAACCAAAAGGTAGTGAGTTCAATCTGTGATGACTGGCCTAGGGACGGGCGTGGTTACTCTTGTTTCAAAAAAAAAAATCTATGATGACTACATACTTGAGTATTAATTTTTTATGGATTTCTTTGACAACCAAATATTGGGTTAAGTGACTGTCCCGTAAGAATAGTCGAGGTGTACGTGAGTGTTCACACGGATATCAAAAAAGAAAAAATATTGCTTACCTTCCTCACTTGAAATCTGGTCAAATTACATGAGCAAATCTCCAGACAACACAAAACGTGCCACCCAATATATTGACTGACATACATTTTTTTGTCTGGATTAACAGGATTGAACTCGTGGATGGGTGATGGTTAGCATAGGGTGAAGAGTTTCCATTAATAGCTCAAAGAATTCTTTTAAAATTGAAATAAGCCATGACTCCTGGAAGCAGTACCTGCAAAGAAGTTGTAGATTCTCACCCCTCAGTTTCAGGTCATGACATAGGAATGTCTAAATCAGAGAATAATTGTACATCTTCAAAAGTGGTTCTTGGATTGGGTGGTAAACTTGGAGTTTATTCAACCAATGGTGTGCAAGAATTGCTTGAGTGCCCTGTCTGTACAAATCTGATGTATCCTCCAATTTACCAGGTATGTTCTCTATACCTTGTTTTTTCTCCTTTACTTGTTCTCATACAATTTAGGCTATATACTTGAACAATTTTAAACGGGTAAATGGCATTTTTACTCTAAATTATTTCGTTTGGGAGTGACATAAAAATGCTTTTTGAAAAAAGTCGAAAGAACCTTAACTGTGTGAGAGAATGCACTTGTAGGGTGTTTTTGGCTTACTTTCCTGACTATGAAGCATTTTAAAGAGTTTATAAACAAGCATCAAAGTAATTTGTCATCAATTACTTTCTATTGTTTTTTCTTAAAAAAAAAGTACTTTTTATTGCTGGTATAGAAGTATTTTTCTTAACTGCACTTTTTTATAAGCACTCTCAAGTCTCAAGTACACCTTTAGACTGCGTTTGTAAGCTTAAGTAGTGCTGTTGTGAGTTGGATAAAATTGCTGAAGGAAAACATGGAGAATTAATTTTGCAAAATTACCTTCATTTGTAAAATCTTCCATACTATGCCCAAATGTGCTCAAGTCATTTCAATGATTGGGTTCAATTGATGAAAGCTGCTGTTAATTTCTTTAAGGTTTAATCTTTATTTCATTCAACAAACGATCTATCCAAAAATTTCTTTAAGGTTTGATGGAGTTTGTAGAATTTTATTAAGAATCTTTGTAAGCTGATAATGTCATTCTTTTGCAAAACATTTTAAAATGTATTCCATAGAAACATGAGGGACATGCTTATTGGAATTGGTGTTTTTCACCTTCCTTTGAGCTTCTTATTTGAGCAATTAAGTGATAATAATATAGGGGGATTTAAGTTTTTTTAAAATATATATATTTATATATCCACGAGTCCAGGTTAGCTTATGTACACCTCGACTGTTTTCATGGGACAACTTGCTACGGTATTTGGAAGTCAAGAAAACCCATAAAAAATTAATTTTAGGTAGGTAGCCGCCATGAATTTAATTGATAACCTTTTGATTCCCCATATAATCCTCTTTACCAACAGGCCAACCTAGAATGGTGGGGATGATAATACTTTTTTTAATGAATTTTCAGAAGGAAACAAACTGGAGGATAAAAATTGTATTTTCTTGATTTTAAAGTTAAGATTTCAATAATTATCTAATTAGTTTGGGGTATAATTCAGTGAAATAAAAAAAATTATGGTAGAAATCTTAGAAGCATAGATACAGACATGACACAATCACGACGACATATCATTTTTTTGAAAAGGTAGAACATGGATGCATAAGGGACACAGTCTTATTTTTTATTTTTTATAACATAATATTAAAAGATCAAGTCCTTATGGGGTGACGCAGTGGTTTAAGACTTGGGCTCTGAGGGTATGCTCCCCTCAAGATCCCAGGTTCGAGACTCACTTGTGACATTACTCTTTCGATGTCTCCGATGCCTGGCCTAGGGAAGGGCGTGATTACCCTTGTTTCAAAAAAAATATATTTAAAGATCAAACTCAAAATGTTTTTTTTTTTTATTATGAAAAATAATCTAAATGTAAATGAAAATGATTAGCATTTAAAGTAACTATACTTTCATAGTTATGAGTCCATTTAAATCCAAACAAAACTTCCTTATCCTTTAAACGTCCACTAGAAGTGCACAAAACAAAATTTATGAAAAGTCTAATCCTTAATAATTCCAAATATTTTAACTTTTCTCTCCCCTCCCTCTTTCATTCTATTCTCTCTCCCTCTTCCATTTTGTCCATCTATTTTAGATGGACGCCCCCTTGACTCCCTCCACCAACATTGCCTCATTACGGAGTTATCGACCACTTGAAAGGTATAAGTTTAAAATGGTGTATCTTGAAGTGTCTGTGACGTGTCCAAAACTTAAAAAAAGAATAATCAAAAGAGGATAAAGAATTTTGCATGCTGCACATGTGTCCGGAAGTATATGTGTGTCCAGAAGTATTTGTGTCCTGCATGGATACTTTGTTTAAATTAAAGTATTTGTGTCCTACAAAGTGATACAACTCATCAAATTTAATGGTAAAGTTTTTTTGGGTAGATTTCGAAGTATTCCATTAGTTACGATTAATTTATTGCAATTGAATAATTAATTAGGTTAATTCAATGCATTATGGTAGGAATTACCAATTTTATTATCAAAACAACAAGAACAGGGGATTCAAGAGCCCCTCACTCTCCAATCTCAAAGAGATAACCTAGACAAATGAATTTTTGAATCCTTTTCCCTTACTCCTACCCGACTATTTATACTAACCAACTCAACAACCTTCCCACGCACTTCACACGCACGAGCTCACCACTCCACACGCACGTGCTCACACCCCCACTCTCACTTTCTTACGCCTAGAATAAACGTACTTAATGGCTGGGGTCGTATCAATACCCGCCCCCCAAAGAACCACCTTGTCCTCAAGGTGGAAGTCAGGATATTGAGCATGAATGAAACTAGCGCACTCCCAAGTCGCATCCTCAGCAAGCCACCTTCCCCATCGAATCAAGACCTCCCGGTCCCCGTCCCACGACGTGGATTCCCGCATGCCCAACACGCCATTGGCGGAACACAAACCCCAAATCATCCTGCAATCCCGGAAGGAACAGGAAACACGGCACGCGAAGTCCCAACCGCTTACGCAACACGAAACATGGAACACCGGATGAATGCGCGCGAGAATCGGGTAAGTCCAATCGATATGCTAACTTGCCAACCCGAGCTATAACTCGCAGTGCGGACCAATAAAACGAGGCGCCCGGCCGGATGTTTAAACTTTGCGGCGAAAGCTGCCGATCTGGCCGTAACTTCAAGTACACCCGATCACCCACCGCAAACCGAACATCCGCGTTTAGCATTAGCCTGTTTGGACATAAGTTGTTGAGCACGCCCAAAGGAAGCCTTGAGTGTAAGCAGCATCTTATCACGATCGACCAATAAGGAATCCACCGCCGATAAAGCACTCTGACCCATCTCATACCCCAAAATGGGCGGTGGGGCACGACCATAAACCGCCTCAAACGGAGTTAACCGAGCAGACGAATGATAAGACGAGTTATAACTATACTCGGCCCACGGAATCCACTTGGACCACTGCTTGGGTTGAGTCATGACAAAGCAACGAAGATACGATTCCAAGCAACGATTAACAACCTCTGTTTGCCCATCCGACTGCGGGTGATATGTCGTACTACGACGGAGTTTTGTGCCTGTGGCACGAAACAACTCTTCCCAAAACGAACTCGTAAATACCTTATCGCGATCAGAAACAATACTACGCGGCATGCCATGTAACCGCACGACCTCCCTGATAAAAAGAGAGCGCAATGGACAACGATGTATAAAGGGTGCTTGACTAACAGAAATGCGCATATTTGGACAACCGATCGACCACCACCAAAGCGATATCAAACCCCCGTAACGAGGAAGTCCTTCCACAAAATCCATAGACACATCTTCCCATTCGCTCGGGAATCGGTAATGGTTGCATGAATAACGGTGGGGCGAGGATAGATACTTAGCTTGAACACAAATAGCACATTCCGCCACAAACGACCGCACACGAGCTTTCATACCCACCCAATAAACCTCCTTAGCCAAGCGTTGATACGTCTTAAGGGCACCGTGATGTCCCCCAATCGGCCCCGAGTGAAATTCCTGTAAGAGTAAGGGAATAGTAGGCGAATCCGGCGGCAGAACCAAACGATCGTTAAAACACAACACTCCTCGAAGTAAGGAAAAACCTTTTGGGGCTGCCTCGCCGTTTAACAATGCGGTATAAATGGTCATCAAGTGTGGATTCGCCTTTACCTGCTCTAAAAACACCTCTGTGTTAACGCCCGATACGTAACTCAGCATTCCTAACTCACAGGCCAAAGGAAGACGCGACAGGCATCGCAATTAATTCTCCAAACCCTTCTTATATTCAATATGAAAATCATAACCCAGCAATTTAGTAACCCAACGTTGATACTCACCATCAATCACACGTTGTTCCAGCAAGAATTTAAGGCTTTTCTGATCCGTACGCACAACAAAATGCTGGCCAAGCAAATATGCCCTCCATCGTTGAACCGCAAACACTATAGCCATCAACTCGCGTTCATAGACCGGCTTACTACGATGTGTAATCGGTAGAGCGCGACTAAAATAAGCGAGAGGTCGACCCTCTTGCATCAAAACGGCCCCAAGTCCGATGCCTGAAGCATCCGTCTCGACCACGAATGGTTGAGAGAAATCGGGTAACCTTAGCACTGGAACACTCACCATAGCATGCTTCAGCCGCTGAAACGAATCCTCAGCCTCTGCACTCCACAAAAATTTCCCTTTCTTCAATAATTGCGTTAACGGAAATGCCATAGTACCATAATTGGCCACAAAACGCCTATAATACCCCGTCAATCCCAGAAACCCCCGCAGCTCCTTGATGGAGAGAGGGCTCGGCCAATTCACCATAGCCTCCAACTTCGCAGGATCAGGTGAGACCCCTTCCGATGAAATAAAATGACCCAGATATTCAATACGCGCCACCCCAAACTGGCATTTCTTGGCATTGGCCACAAACTGATGATGCTTAAGCACCTCAAACACCTGAGTTAAATGGGACAGATGCTCCTCCACGGACACGCTATAAACCAATATATCATCAAAGAAAACCAAAACAAACTCCGTAAGTATGGACGCAAAATCTCGTTCATTACCGATTGGAAGGTAGTCAGGCATTCCGCAACCCGAAAAAGGCATTACTAAAAACTCATAATGTCCTCATGAGTTCGAAAAAGTCATTTTGAATGTCACCGTCGGACTCGAATCGATGATACCCGCCTTAAGATCAATCTTGGAAAAAACCATCGCTCCATGCAACTCATCTAATAACTCGTCAACTAAAGGAATAGGAAACTTATCCGCACAAGATAACCAAATTCAAAGCCCTATAATCCACACAGAACCGCCAACTTCCATCTTTCTTTTTACCAACAACAGGGCTCGAAAAGAACTAGTACTCGGGCGTATAATACCCGCTAATAGCATATCCTTTACGATCGTTCTATCTCATTCTTTGAAATCGGGATATCTATACGGCCGCGACGTTAATCGATTCCTTACCCGCATACAACTCTATAGCATGGTCGCAACTTCACGAGGAGGTAGCGGCAGCGGCTCAAAGATCTTTGCGTCTTTGGAACAACAACGGTTGTAAATCATTTGGCGTATCGTCGGCGATGAACCAACTCGGCTTACTTCTAGGTGTGGATGCCATGTCCAACAAATTAAGCTCAATTAAAAGACCGTGATCCTCTACACGTAACGACTTCATCATAGACTTCAGAGAAACCTGAGCCTTCACCAAACTAGGATCTCCTTGTAACTGTACGCTCCACGGACCCACCACAAAACGCATCTGCAGAACACGATAATCAAATTCTACCTTCCCCAATGTTTCCAACCACGCAACACAGAGAATAACGTCCGCGACCGCCCAATGGCAAGGGCAAAAATCATGAACCACCCTTAGCTCGCCCATCGTAGCGCCACGCCCTTGCATACCCCCGCCTTGCTCTCACCGAGTCTCCGTCCCCAAAACTATTCCATAATCATTTGACGCAGCGCAACCGAGCGGTCCCAATCTCGACACCAATTCCTCGAAATGAAATTATGAGTCGCCCGTGTGTCGACAAGAACTACCACATCCATCCCTAAAATATTACCACGCACCTTCAAAGTCTTCGGAGAGCTTAGGCCAGCTAACGAATTCAATGATAACGTTGCCATCTCATGATCCATTTCAGCTTCACCCAAATCCACTCCTTCGGAAACATCTTCCAGAGATCTATCACTATCCTCTGTTTCTCCACCCTCAATTTCGTCCCGAACCACCAACACTTGTAATGCTTGCAATTCAGTTTTCTTGCACTTGTGACCAGGAAAGAACTTATCATCACAACGAAAACATAAGCCCTTATCTTTCTTGGCTCGGATTTCGCTATCCGTCAATCGCTTAAAAGGACCCTTCAAACCCGATGTATTAACACTCACTGTTGTGGACGAACTACTGTTCAAGCGGCGTGGTGAGAAAGTGAACGAGCGCAAATTCGAGTTGCTCGAACCACCCGATTGGATGATCCCGAACTACCGGAAGCAACACTACTCTGCTGACCCCACACTAGTAGACTCGAGTCTCCTCTTTGCTTGTCTTGCAAAATCGTCTTCGATCGATTCTGCGCCATAAGCATTTTTGCTTTCAAACCGACTGGGCAAAGCTTCCTCATCTCGCTTTGGACCTCTTCCTTAAGTCCACTTTCGAATTTTCCTTCCAACAACTTCTCACTTAAATCCTTCAACCCGATCGAATATTTCTCAAACAATCGACGGTAGGCCCGGACTGTACCAACTTGTTGAAGACTCATCAGCGAGCATATCTATTTACTTGTGAAGTTGGCTGAAATCGTTCCAATAACAACACTCGAAAATCACTCCACGAGCGAATAGAAGAGCGATCTTCCTCATATTGATGCCAATCTAATGCTTCTCCTTCTAAGCACATCACTGCGGCATCCAATTTATCACTCTCCGAGAGTCGATTAACCAGAAAATACCTCTCAACACGATGCAACCACCCTATCGGATCTTCGTCCTCTGTTCCTTTAAACACCGGAACCTCCAGCTTCCTTAGACGCATATCGAACAATGGCACTTCTTTGCTCGTTGGTGCTTGAATGCCGATTTTCGCAACTTCCTTTGAATCGACGACGACTCGCCAATTCTCGGCAATTCCGCACATTTGAACTCTCAAACTCTGCTCACTTGCACACGGAAAACCTTCAATCGTCGGCTTCAATGGAGGCGCTTCCATCTGCGCGACATTCTTTCCCTTCCCCGTCGCCGAGATCTCGCCGATCACCTCCTCTGTTTCGCGTCGCGAAAACAGAGATCTCATTTCCTCCCTCAGCAATTCGAATTGAAGATCTCTACGTACCTCAGACGCCTTCTGCTTCTCCTCCAATGCCGCGAACTGCGTCGTGATCTGCGATTCCAGATCTTGCTGCTTCGACGCCACGGTTTCGGCCACATCTTCCACGGATTTCAGACGTTGATCCAATTTCCCAGTCATCTTCCGATCGACAACCGCTCTGATACCAAAATTGGTAGGAATTACCAATTTTATTATCAAAACAACAAGAACAGGGGATTCAAGAGCCCCTCACTCTCCAATCTCAAAGAGATAACCTAGACAAATGAATTTTTGAATCCTTTTCCCTTACTCCTACCCGACTATTTATACTAACCAACTCAACAACCTTCCCACGCACTTCACACGCACGAGCTCACCACTCCACACGCACGTGCTCACACCCCCACTCTCACTTTCTTACGCCTAGAATAAACGTACTTAATGGCTGGGGTCGTATCACATTATTATTAAATCATTTTTATATAATTGTGTTGTCTATAAAAGTTCATTTATATCAATTATTTTAATGGAATAAATAATGTATCTAAAAGGAAAGAAATGATATTAACAAAAATAAGAGAGGGAAAGAGAACATGAAGAAATCCATGTTCTTGCAAGGGTACCAAATATTCCTATTCATGGCCACATGGGTTGGGTTTAGAAACCCATGGAAATAGCTCCAAAACTTTGTACCAGACAAGGGATTTTGTATCCCTTTATTCTCATCCCCATTTCTTTAATCCAAACAACCTTTAAAGTTCTTTTCTTATTATTAAAGTTGCATTAAAGACTTAAAACATCTCTTTATTCTTGAATCTGTATGTCATGGAAATGTGATATACATGCTTTGTTTCGTACTTGCTTACTGAATTTTGAACATCAGTGCCCAAATGGCCACACATTGTGCTCGAACTGCAAGATCAGAGTTAGCAACTCTTGCCCGGCCTGCCGTCACGAACTCGGAAATATTAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTAGAAATTCCCTGCAGATACCAAAACTTGGGTTGTCAAGATATTTTTCCTTACTACAGTAAGCTTAAACATGAGCAACACTGTCGATTCCGCCCTTACAGCTGCCCTTATGCTGGATCAGAGTGCTCGATCACGGGCGACATCCCGTCTCTGGTTGCACATCTAAAAAATGATCACAAGGTTGACATGCATGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAATCCACATGAAGTCGAAAATGCCACATGGATGCTAACGGTAGGCGCTTTCTCTATATATCATTAATATACTTTCTCACGACAGTGACTTCATATAACATTATCCATATAAGCCATCACACATTGACGAATGGTCAACAAGGGTCATTTTAAATAGTTAATAGTTAAGGTCTCAGATGTAGCATATTTTTTTATTTATGGTGGTCATTTATCTACGACTTAGTGTGACAAACTTTGTTGGAATCAAATATAGTAGAGTTAGGTGGTCATCTCACAAAAATAGTTAAAGGACTCTATTAACTATGTAGTTCTTCATATATAACTGTTTATTCATGTCTGATAAACCTGGTTTTCTTTCAATCTTTGGGCATTGTAATGTTTACCTTGCATTGGCAGGTTTTCAACTGTTTTGGAAGGCAGTTCTGCTTGCATTTTGAGGCATTCCAGCAAGGAATGGCGCCGGTTTACATGGCATTTCTACGATTCATGGGTGACGATAACGAAGCGAAGAAGTTCAGCTACAGTTTGGAAGTGGGTGGCAACGGGCGTAAACTGATATGGCAAGGAATTCCGAGGGGCATCCGCGATAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCATAGAAACCTGGCACTCTATTTTTCGGGAGGGGAAAGGAAAGAGCTGAAGCTGAGAATCACAGGTCGAATATGGAAAGAAGAATGAGATTGAGGACGTCAAGCCGTGGTGTTGAGGTGAATGTTTTTGTACAGTTAAAACAAGTTTGTTAGGCCAGTGGCAAGGGTTTGCTCCCAGTGCTGAAGAGGCTTTTGGAAAAACTTTCAAGCTGATATAAAAAATGTAATTTTACCAAATGAATCAAAGTATTTTGGTGTCTCGTGTTGTGTATTTGGAGCCAAGTTTCTCCATGTCTTTCTTTTATTAGTGATTGATTAGCTCTGCAATGTAAGTGTTTGTTTGGCAGGTGTTTTATAGCTTGTCCATGAAATGGGGTTTTAGTAAATGTGCAACCTTGTGTGTATTGCTTTTCTTTTAATCAATGTTGAAATGATCAAGC

mRNA sequence

GTTTTCTAACTTTTTTCTTTCTTTTCCTTTTCGAAAGCTTTTTCTGTCAAAAGAAAGAAAAGAAAGTGTGAAATTGAAAAAGAGAGAGAGAGGAAACCATTATAATGGCGGACCCGGAGCAGTGGTGAAAGCGCTTTGCAATTCCAACGATTCATTCATAAACAATCATTAATCACATATCCCTTTTTGTTCGAATTCGAAATCCGAGAAGATTTACGCGCAACCCAGTTCCGGCTCTCGTGGGATGCAGGATTGAACTCGTGGATGGGTGATGGTTAGCATAGGGTGAAGAGTTTCCATTAATAGCTCAAAGAATTCTTTTAAAATTGAAATAAGCCATGACTCCTGGAAGCAGTACCTGCAAAGAAGTTGTAGATTCTCACCCCTCAGTTTCAGGTCATGACATAGGAATGTCTAAATCAGAGAATAATTGTACATCTTCAAAAGTGGTTCTTGGATTGGGTGGTAAACTTGGAGTTTATTCAACCAATGGTGTGCAAGAATTGCTTGAGTGCCCTGTCTGTACAAATCTGATGTATCCTCCAATTTACCAGTGCCCAAATGGCCACACATTGTGCTCGAACTGCAAGATCAGAGTTAGCAACTCTTGCCCGGCCTGCCGTCACGAACTCGGAAATATTAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTAGAAATTCCCTGCAGATACCAAAACTTGGGTTGTCAAGATATTTTTCCTTACTACAGTAAGCTTAAACATGAGCAACACTGTCGATTCCGCCCTTACAGCTGCCCTTATGCTGGATCAGAGTGCTCGATCACGGGCGACATCCCGTCTCTGGTTGCACATCTAAAAAATGATCACAAGGTTGACATGCATGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAATCCACATGAAGTCGAAAATGCCACATGGATGCTAACGGTTTTCAACTGTTTTGGAAGGCAGTTCTGCTTGCATTTTGAGGCATTCCAGCAAGGAATGGCGCCGGTTTACATGGCATTTCTACGATTCATGGGTGACGATAACGAAGCGAAGAAGTTCAGCTACAGTTTGGAAGTGGGTGGCAACGGGCGTAAACTGATATGGCAAGGAATTCCGAGGGGCATCCGCGATAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCATAGAAACCTGGCACTCTATTTTTCGGGAGGGGAAAGGAAAGAGCTGAAGCTGAGAATCACAGGTCGAATATGGAAAGAAGAATGAGATTGAGGACGTCAAGCCGTGGTGTTGAGGTGAATGTTTTTGTACAGTTAAAACAAGTTTGTTAGGCCAGTGGCAAGGGTTTGCTCCCAGTGCTGAAGAGGCTTTTGGAAAAACTTTCAAGCTGATATAAAAAATGTAATTTTACCAAATGAATCAAAGTATTTTGGTGTCTCGTGTTGTGTATTTGGAGCCAAGTTTCTCCATGTCTTTCTTTTATTAGTGATTGATTAGCTCTGCAATGTAAGTGTTTGTTTGGCAGGTGTTTTATAGCTTGTCCATGAAATGGGGTTTTAGTAAATGTGCAACCTTGTGTGTATTGCTTTTCTTTTAATCAATGTTGAAATGATCAAGC

Coding sequence (CDS)

ATGACTCCTGGAAGCAGTACCTGCAAAGAAGTTGTAGATTCTCACCCCTCAGTTTCAGGTCATGACATAGGAATGTCTAAATCAGAGAATAATTGTACATCTTCAAAAGTGGTTCTTGGATTGGGTGGTAAACTTGGAGTTTATTCAACCAATGGTGTGCAAGAATTGCTTGAGTGCCCTGTCTGTACAAATCTGATGTATCCTCCAATTTACCAGTGCCCAAATGGCCACACATTGTGCTCGAACTGCAAGATCAGAGTTAGCAACTCTTGCCCGGCCTGCCGTCACGAACTCGGAAATATTAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTAGAAATTCCCTGCAGATACCAAAACTTGGGTTGTCAAGATATTTTTCCTTACTACAGTAAGCTTAAACATGAGCAACACTGTCGATTCCGCCCTTACAGCTGCCCTTATGCTGGATCAGAGTGCTCGATCACGGGCGACATCCCGTCTCTGGTTGCACATCTAAAAAATGATCACAAGGTTGACATGCATGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAATCCACATGAAGTCGAAAATGCCACATGGATGCTAACGGTTTTCAACTGTTTTGGAAGGCAGTTCTGCTTGCATTTTGAGGCATTCCAGCAAGGAATGGCGCCGGTTTACATGGCATTTCTACGATTCATGGGTGACGATAACGAAGCGAAGAAGTTCAGCTACAGTTTGGAAGTGGGTGGCAACGGGCGTAAACTGATATGGCAAGGAATTCCGAGGGGCATCCGCGATAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCATAGAAACCTGGCACTCTATTTTTCGGGAGGGGAAAGGAAAGAGCTGAAGCTGAGAATCACAGGTCGAATATGGAAAGAAGAATGA

Protein sequence

MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKKFSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRITGRIWKEE

Homology

[Close]

BLAST of Sed0013989 vs. NCBI nr
Match: XP_038881778.1 (E3 ubiquitin-protein ligase SINAT2-like [Benincasa hispida] >XP_038881779.1 E3 ubiquitin-protein ligase SINAT2-like [Benincasa hispida])

HSP 1 Score: 626.7 bits (1615), Expect = 1.1e-175
Identity = 288/307 (93.81%), Postives = 297/307 (96.74%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCKEVVDSHPSVSGHDI MSK+ENN TSSK  LGL GK+GVYSTNGVQELLECP
Sbjct: 1   MAPGSSTCKEVVDSHPSVSGHDIAMSKTENNSTSSKAALGLSGKIGVYSTNGVQELLECP 60

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPIYQCP+GHTLCSNCKIRVSN CP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 61  VCTNLMYPPIYQCPSGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 120

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCR+RPY+CPYAGSECS+TGDIPSLVAHLK+DHKVDMHDGCT
Sbjct: 121 NLGCQDIFPYYSKLKHEQHCRYRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 180

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFG+QFCLHFEAFQ GMAPVYMAFLRFMGDDNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGKQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKK 240

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRIT 300

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 301 GRIWKEE 307

[Close]

BLAST of Sed0013989 vs. NCBI nr
Match: XP_022967856.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita maxima] >XP_023543585.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543586.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543587.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 625.9 bits (1613), Expect = 1.8e-175
Identity = 290/307 (94.46%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCKEVVDSHPSVSGHDI MSKSENN TSSKV+LG  GKLGVYSTNGVQELLECP
Sbjct: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPIYQCPNGHTLCSNCKIRVSN CP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIPSLVAHLK+DHKVDMHDGCT
Sbjct: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ G APVYMAFLRFMG+DNEAKK
Sbjct: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVG NGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 303 GRIWKEE 309

[Close]

BLAST of Sed0013989 vs. NCBI nr
Match: XP_022928730.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_022928731.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_022928732.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_022928733.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_022928734.1 E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 625.5 bits (1612), Expect = 2.3e-175
Identity = 290/307 (94.46%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCKEVVDSHPSVSGHDI MSKSENN TSSKV+LG  GKLGVYSTNGVQELLECP
Sbjct: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPIYQCPNGHTLCSNCKIRVSN CP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIPSLVAHLK+DHKVDMHDGCT
Sbjct: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ G APVYMAFLRFMG+DNEAKK
Sbjct: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVG NGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRIT 302

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 303 GRIWKEE 309

[Close]

BLAST of Sed0013989 vs. NCBI nr
Match: KAG6603259.1 (E3 ubiquitin-protein ligase SINAT2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033559.1 E3 ubiquitin-protein ligase SINAT2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 623.6 bits (1607), Expect = 8.9e-175
Identity = 289/307 (94.14%), Postives = 295/307 (96.09%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCKEVVDSHPSVSGHDI MSKSENN TSSKV+LG  GKLGVYSTNGVQELLECP
Sbjct: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VC NLMYPPIYQCPNGHTLCSNCKIRVSN CP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 63  VCMNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIPSLVAHLK+DHKVDMHDGCT
Sbjct: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ G APVYMAFLRFMG+DNEAKK
Sbjct: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVG NGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 303 GRIWKEE 309

[Close]

BLAST of Sed0013989 vs. NCBI nr
Match: XP_023518392.1 (E3 ubiquitin-protein ligase SINAT2-like [Cucurbita pepo subsp. pepo] >XP_023518393.1 E3 ubiquitin-protein ligase SINAT2-like [Cucurbita pepo subsp. pepo] >KAG6595627.1 E3 ubiquitin-protein ligase SINAT2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027600.1 E3 ubiquitin-protein ligase SINAT2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 621.7 bits (1602), Expect = 3.4e-174
Identity = 290/307 (94.46%), Postives = 297/307 (96.74%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCK+ VDSHPSVSGHDI +SKSENN T+SK  LGLGGKLGVYSTNGVQELLECP
Sbjct: 1   MAPGSSTCKK-VDSHPSVSGHDIAISKSENNPTTSKASLGLGGKLGVYSTNGVQELLECP 60

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPTCRHELGNIRCLALEKVAESLEIPCRYQ 120

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDI SLVAHLK+DHKVDMHDGCT
Sbjct: 121 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIQSLVAHLKDDHKVDMHDGCT 180

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ GMAPVYMAFLRFMGDDNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKK 240

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRIT 300

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 301 GRIWKEE 306

[Close]

BLAST of Sed0013989 vs. ExPASy Swiss-Prot
Match: Q9M2P4 (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 9.0e-154
Identity = 250/308 (81.17%), Postives = 275/308 (89.29%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSE-NNCTSSKVVLGLGGKLGVYSTNGVQELLEC 60
           M PG S  KEV++S+ +   +++  +K E NN   +K      GK G++S NGV ELLEC
Sbjct: 1   MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLEC 60

Query: 61  PVCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRY 120
           PVCTNLMYPPI+QCPNGHTLCSNCK+RV N+CP CR+ELGNIRCLALEKVAESLE+PCRY
Sbjct: 61  PVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 120

Query: 121 QNLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGC 180
           QNLGC DIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIP+LV HLK+DHKVDMHDGC
Sbjct: 121 QNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGC 180

Query: 181 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAK 240
           TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ GMAPVYMAFLRFMGD+NEAK
Sbjct: 181 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK 240

Query: 241 KFSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRI 300
           KFSYSLEVG +GRKL WQGIPR IRDSHRKVRDSQDGLII RNLALYFSGG+R+ELKLR+
Sbjct: 241 KFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV 300

Query: 301 TGRIWKEE 308
           TGRIWKEE
Sbjct: 301 TGRIWKEE 308

[Close]

BLAST of Sed0013989 vs. ExPASy Swiss-Prot
Match: P93748 (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana OX=3702 GN=SINAT1 PE=1 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 1.2e-150
Identity = 246/307 (80.13%), Postives = 272/307 (88.60%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PG S  KE ++S+ +   +++ M+K E N   +K   G  GK   +S+NGV ELLECP
Sbjct: 1   MAPGGSALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKF--HSSNGVYELLECP 60

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPI+QCPNGHTLCS+CK+RV N+CP CR+ELGNIRCLALEKVAESLE+PCRYQ
Sbjct: 61  VCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQ 120

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFR YSCPYAGSECS+TGDIP+LV HLK+DHKVDMHDGCT
Sbjct: 121 NLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCT 180

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ GMAPVYMAFLRFMGD+NEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKK 240

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVG + RKL WQGIPR IRDSHRKVRDSQDGLII RNLALYFSG +++ELKLR+T
Sbjct: 241 FSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVT 300

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 301 GRIWKEE 305

[Close]

BLAST of Sed0013989 vs. ExPASy Swiss-Prot
Match: Q10L91 (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 9.7e-132
Identity = 209/264 (79.17%), Postives = 233/264 (88.26%), Query Frame = 0


Query: 44  KLGVYSTNGVQELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRC 103
           K  V  ++ V+ELLECPVC + MYPPI+QC NGHTLCS CK RV N CP CRHELGNIRC
Sbjct: 38  KPNVVVSSSVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRC 97

Query: 104 LALEKVAESLEIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSL 163
           LALEKVA SLE+PC+YQN GC  I+PYY KLKHE  C++RPYSCPYAGSEC++ GDIP L
Sbjct: 98  LALEKVAASLELPCKYQNFGCVGIYPYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYL 157

Query: 164 VAHLKNDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAP 223
           V HLK+DHKVDMH+GCTFNHRYVKSNPHEVENATWMLTVF+CFG+ FCLHFEAFQ GMAP
Sbjct: 158 VNHLKDDHKVDMHNGCTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAP 217

Query: 224 VYMAFLRFMGDDNEAKKFSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNL 283
           VY+AFLRFMGDD EAK +SYSLEVGG GRK+IWQG+PR IRDSHRKVRDS DGLII RN+
Sbjct: 218 VYIAFLRFMGDDLEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNM 277

Query: 284 ALYFSGGERKELKLRITGRIWKEE 308
           AL+FSGGERKELKLR+TGRIWKE+
Sbjct: 278 ALFFSGGERKELKLRVTGRIWKEQ 301

[Close]

BLAST of Sed0013989 vs. ExPASy Swiss-Prot
Match: Q84JL3 (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.4e-130
Identity = 218/294 (74.15%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 14  SHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECPVCTNLMYPPIYQC 73
           S+ SVS H      + NN T+  V     G L   +T  V ELLECPVCTN MYPPI+QC
Sbjct: 26  SYASVSKH----HHTNNNTTN--VNAAASGLLP--TTTSVHELLECPVCTNSMYPPIHQC 85

Query: 74  PNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYSK 133
            NGHTLCS CK RV N CP CR ELG+IRCLALEKVAESLE+PC++ +LGC +IFPYYSK
Sbjct: 86  HNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFPYYSK 145

Query: 134 LKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCTFNHRYVKSNPHEV 193
           LKHE  C FRPYSCPYAGSECS+TGDIP LVAHL++DHKVDMH GCTFNHRYVKSNP EV
Sbjct: 146 LKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREV 205

Query: 194 ENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKKFSYSLEVGGNGRK 253
           ENATWMLTVF+CFG+ FCLHFEAFQ GMAPVYMAFLRFMGD+ EA+ ++YSLEVGG GRK
Sbjct: 206 ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYNYSLEVGGYGRK 265

Query: 254 LIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRITGRIWKEE 308
           LIW+G PR +RDSHRKVRDS DGLII RN+AL+FSGG+RKELKLR+TGRIWKE+
Sbjct: 266 LIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 311

[Close]

BLAST of Sed0013989 vs. ExPASy Swiss-Prot
Match: Q9STN8 (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 3.4e-129
Identity = 210/303 (69.31%), Postives = 241/303 (79.54%), Query Frame = 0


Query: 5   SSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECPVCTN 64
           SST  E+  +      +    +K+     ++ VV  + G         V ELLECPVCT 
Sbjct: 10  SSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYELLECPVCTY 69

Query: 65  LMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQNLGC 124
            MYPPI+QC NGHTLCS CK+RV N CP CR ELG+IRCLALEKVAESLE+PC++ NLGC
Sbjct: 70  SMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGC 129

Query: 125 QDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCTFNHR 184
            +IFPYYSKLKHE  C FRPYSCPYAGSEC I GDIP LVAHL++DHKVDMH G TFNHR
Sbjct: 130 PEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHR 189

Query: 185 YVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKKFSYS 244
           YVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQ GM PVYMAFLRFMGD+ +A+ +SYS
Sbjct: 190 YVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYS 249

Query: 245 LEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRITGRIW 304
           LEVGG+GRKL W+G PR IRDSHRKVRDS DGLII RN+AL+FSGG+RKELKLR+TG+IW
Sbjct: 250 LEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIW 309

Query: 305 KEE 308
           KE+
Sbjct: 310 KEQ 312

[Close]

BLAST of Sed0013989 vs. ExPASy TrEMBL
Match: A0A6J1HT85 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111467239 PE=3 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 8.7e-176
Identity = 290/307 (94.46%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCKEVVDSHPSVSGHDI MSKSENN TSSKV+LG  GKLGVYSTNGVQELLECP
Sbjct: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPIYQCPNGHTLCSNCKIRVSN CP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIPSLVAHLK+DHKVDMHDGCT
Sbjct: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ G APVYMAFLRFMG+DNEAKK
Sbjct: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVG NGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 303 GRIWKEE 309

[Close]

BLAST of Sed0013989 vs. ExPASy TrEMBL
Match: A0A6J1ESE8 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111435553 PE=3 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.1e-175
Identity = 290/307 (94.46%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCKEVVDSHPSVSGHDI MSKSENN TSSKV+LG  GKLGVYSTNGVQELLECP
Sbjct: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPIYQCPNGHTLCSNCKIRVSN CP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIPSLVAHLK+DHKVDMHDGCT
Sbjct: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ G APVYMAFLRFMG+DNEAKK
Sbjct: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVG NGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRIT 302

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 303 GRIWKEE 309

[Close]

BLAST of Sed0013989 vs. ExPASy TrEMBL
Match: A0A6J1EBG4 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432512 PE=3 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.1e-174
Identity = 289/307 (94.14%), Postives = 297/307 (96.74%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCK+ VDSHPS+SGHDI +SKSENN T+SK  LGLGGKLGVYSTNGVQELLECP
Sbjct: 1   MAPGSSTCKK-VDSHPSISGHDIAISKSENNPTTSKASLGLGGKLGVYSTNGVQELLECP 60

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPTCRHELGNIRCLALEKVAESLEIPCRYQ 120

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDI SLVAHLK+DHKVDMHDGCT
Sbjct: 121 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIQSLVAHLKDDHKVDMHDGCT 180

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ GMAPVYMAFLRFMGDDNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKK 240

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRIT 300

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 301 GRIWKEE 306

[Close]

BLAST of Sed0013989 vs. ExPASy TrEMBL
Match: A0A6J1HS09 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111466063 PE=3 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.4e-173
Identity = 289/307 (94.14%), Postives = 296/307 (96.42%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PGSSTCK+ VDSH SVSGHDI +SKSENN T+SK  LGLGGKLGVYSTNGVQELLECP
Sbjct: 1   MAPGSSTCKK-VDSHLSVSGHDIAISKSENNPTTSKASLGLGGKLGVYSTNGVQELLECP 60

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCP CRHELGNIRCLALEKVAESLEIPCRYQ
Sbjct: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPTCRHELGNIRCLALEKVAESLEIPCRYQ 120

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDI SLVAHLK+DHKVDMHDGCT
Sbjct: 121 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIQSLVAHLKDDHKVDMHDGCT 180

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ GMAPVYMAFLRFMGDDNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKK 240

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER+ELKLRIT
Sbjct: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRIT 300

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 301 GRIWKEE 306

[Close]

BLAST of Sed0013989 vs. ExPASy TrEMBL
Match: A0A6J1DL03 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111022066 PE=3 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 1.4e-170
Identity = 283/315 (89.84%), Postives = 294/315 (93.33%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSE--------NNCTSSKVVLGLGGKLGVYSTNG 60
           M PG+S CKEVVDSHPSVSGHDI +SKSE        +N  S+KV+LGLGGKLGVYSTNG
Sbjct: 1   MAPGTSACKEVVDSHPSVSGHDIAVSKSESNSNSNSNSNSASTKVLLGLGGKLGVYSTNG 60

Query: 61  VQELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAES 120
           VQELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSN CP CRHELGNIRCLALEKVAES
Sbjct: 61  VQELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAES 120

Query: 121 LEIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHK 180
           LEIPCRY +LGC DIFPYYSKLKHEQHCRFRPY+CPYAGSECS++GDIPSLV HLK+DHK
Sbjct: 121 LEIPCRYHSLGCLDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVSGDIPSLVTHLKDDHK 180

Query: 181 VDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFM 240
           VDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ GMAPVYMAFLRFM
Sbjct: 181 VDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFM 240

Query: 241 GDDNEAKKFSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGER 300
           GDDNEAKKFSYSLEVGGNGRKLIW GIPRGIRDSHRKVRDSQDGLII RNLALYFSGGER
Sbjct: 241 GDDNEAKKFSYSLEVGGNGRKLIWHGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGER 300

Query: 301 KELKLRITGRIWKEE 308
           +ELKLRITGRIWKEE
Sbjct: 301 QELKLRITGRIWKEE 315

[Close]

BLAST of Sed0013989 vs. TAIR 10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2 )

HSP 1 Score: 544.3 bits (1401), Expect = 6.4e-155
Identity = 250/308 (81.17%), Postives = 275/308 (89.29%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSE-NNCTSSKVVLGLGGKLGVYSTNGVQELLEC 60
           M PG S  KEV++S+ +   +++  +K E NN   +K      GK G++S NGV ELLEC
Sbjct: 1   MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLEC 60

Query: 61  PVCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRY 120
           PVCTNLMYPPI+QCPNGHTLCSNCK+RV N+CP CR+ELGNIRCLALEKVAESLE+PCRY
Sbjct: 61  PVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 120

Query: 121 QNLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGC 180
           QNLGC DIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIP+LV HLK+DHKVDMHDGC
Sbjct: 121 QNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGC 180

Query: 181 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAK 240
           TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ GMAPVYMAFLRFMGD+NEAK
Sbjct: 181 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK 240

Query: 241 KFSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRI 300
           KFSYSLEVG +GRKL WQGIPR IRDSHRKVRDSQDGLII RNLALYFSGG+R+ELKLR+
Sbjct: 241 KFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV 300

Query: 301 TGRIWKEE 308
           TGRIWKEE
Sbjct: 301 TGRIWKEE 308

[Close]

BLAST of Sed0013989 vs. TAIR 10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 533.9 bits (1374), Expect = 8.6e-152
Identity = 246/307 (80.13%), Postives = 272/307 (88.60%), Query Frame = 0


Query: 1   MTPGSSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECP 60
           M PG S  KE ++S+ +   +++ M+K E N   +K   G  GK   +S+NGV ELLECP
Sbjct: 1   MAPGGSALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKF--HSSNGVYELLECP 60

Query: 61  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQ 120
           VCTNLMYPPI+QCPNGHTLCS+CK+RV N+CP CR+ELGNIRCLALEKVAESLE+PCRYQ
Sbjct: 61  VCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQ 120

Query: 121 NLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCT 180
           NLGCQDIFPYYSKLKHEQHCRFR YSCPYAGSECS+TGDIP+LV HLK+DHKVDMHDGCT
Sbjct: 121 NLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCT 180

Query: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKK 240
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ GMAPVYMAFLRFMGD+NEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKK 240

Query: 241 FSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRIT 300
           FSYSLEVG + RKL WQGIPR IRDSHRKVRDSQDGLII RNLALYFSG +++ELKLR+T
Sbjct: 241 FSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVT 300

Query: 301 GRIWKEE 308
           GRIWKEE
Sbjct: 301 GRIWKEE 305

[Close]

BLAST of Sed0013989 vs. TAIR 10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 467.2 bits (1201), Expect = 9.9e-132
Identity = 218/294 (74.15%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 14  SHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECPVCTNLMYPPIYQC 73
           S+ SVS H      + NN T+  V     G L   +T  V ELLECPVCTN MYPPI+QC
Sbjct: 26  SYASVSKH----HHTNNNTTN--VNAAASGLLP--TTTSVHELLECPVCTNSMYPPIHQC 85

Query: 74  PNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYSK 133
            NGHTLCS CK RV N CP CR ELG+IRCLALEKVAESLE+PC++ +LGC +IFPYYSK
Sbjct: 86  HNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFPYYSK 145

Query: 134 LKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCTFNHRYVKSNPHEV 193
           LKHE  C FRPYSCPYAGSECS+TGDIP LVAHL++DHKVDMH GCTFNHRYVKSNP EV
Sbjct: 146 LKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREV 205

Query: 194 ENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKKFSYSLEVGGNGRK 253
           ENATWMLTVF+CFG+ FCLHFEAFQ GMAPVYMAFLRFMGD+ EA+ ++YSLEVGG GRK
Sbjct: 206 ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYNYSLEVGGYGRK 265

Query: 254 LIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRITGRIWKEE 308
           LIW+G PR +RDSHRKVRDS DGLII RN+AL+FSGG+RKELKLR+TGRIWKE+
Sbjct: 266 LIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 311

[Close]

BLAST of Sed0013989 vs. TAIR 10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 462.6 bits (1189), Expect = 2.4e-130
Identity = 210/303 (69.31%), Postives = 241/303 (79.54%), Query Frame = 0


Query: 5   SSTCKEVVDSHPSVSGHDIGMSKSENNCTSSKVVLGLGGKLGVYSTNGVQELLECPVCTN 64
           SST  E+  +      +    +K+     ++ VV  + G         V ELLECPVCT 
Sbjct: 10  SSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYELLECPVCTY 69

Query: 65  LMYPPIYQCPNGHTLCSNCKIRVSNSCPACRHELGNIRCLALEKVAESLEIPCRYQNLGC 124
            MYPPI+QC NGHTLCS CK+RV N CP CR ELG+IRCLALEKVAESLE+PC++ NLGC
Sbjct: 70  SMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGC 129

Query: 125 QDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSLVAHLKNDHKVDMHDGCTFNHR 184
            +IFPYYSKLKHE  C FRPYSCPYAGSEC I GDIP LVAHL++DHKVDMH G TFNHR
Sbjct: 130 PEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHR 189

Query: 185 YVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAPVYMAFLRFMGDDNEAKKFSYS 244
           YVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQ GM PVYMAFLRFMGD+ +A+ +SYS
Sbjct: 190 YVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYS 249

Query: 245 LEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNLALYFSGGERKELKLRITGRIW 304
           LEVGG+GRKL W+G PR IRDSHRKVRDS DGLII RN+AL+FSGG+RKELKLR+TG+IW
Sbjct: 250 LEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIW 309

Query: 305 KEE 308
           KE+
Sbjct: 310 KEQ 312

[Close]

BLAST of Sed0013989 vs. TAIR 10
Match: AT5G53360.1 (TRAF-like superfamily protein )

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-100
Identity = 160/204 (78.43%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 104 LALEKVAESLEIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPSL 163
           +ALEKVAESLE+PC+Y NLGC  IFPYYSKLKHE  C FRPYSCPYAGSEC+  GDI  L
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 164 VAHLKNDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQQGMAP 223
           VAHL++DHKVDMH GCTFNHRYVKSNP EVENATWMLTVF CFG+ FCLHFEAFQ GMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 224 VYMAFLRFMGDDNEAKKFSYSLEVGGNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIHRNL 283
           VYMAFLRFMGD+++A+ ++YSLEVGG+GRK  W+G PR +RDSHRKVRDS DGLII RN+
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 284 ALYFSGGERKELKLRITGRIWKEE 308
           AL+FSGG++KELKLR+TGRIWKE+
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

The following BLAST results are available for this feature:

BLAST of Sed0013989 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881778.1	1.1e-175	93.81	E3 ubiquitin-protein ligase SINAT2-like [Benincasa hispida] >XP_038881779.1 E3 u...	[more]
XP_022967856.1	1.8e-175	94.46	E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita maxima] >XP_023543...	[more]
XP_022928730.1	2.3e-175	94.46	E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Cucurbita moschata] >XP_0229...	[more]
KAG6603259.1	8.9e-175	94.14	E3 ubiquitin-protein ligase SINAT2, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023518392.1	3.4e-174	94.46	E3 ubiquitin-protein ligase SINAT2-like [Cucurbita pepo subsp. pepo] >XP_0235183...	[more]

BLAST of Sed0013989 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2P4	9.0e-154	81.17	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=...	[more]
P93748	1.2e-150	80.13	Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]
Q10L91	9.7e-132	79.17	E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS...	[more]
Q84JL3	1.4e-130	74.15	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=...	[more]
Q9STN8	3.4e-129	69.31	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=...	[more]

BLAST of Sed0013989 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HT85	8.7e-176	94.46	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111467239 P...	[more]
A0A6J1ESE8	1.1e-175	94.46	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111435553...	[more]
A0A6J1EBG4	2.1e-174	94.14	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111432512...	[more]
A0A6J1HS09	2.4e-173	94.14	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111466063 P...	[more]
A0A6J1DL03	1.4e-170	89.84	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102206...	[more]

BLAST of Sed0013989 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58040.1	6.4e-155	81.17	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	8.6e-152	80.13	Protein with RING/U-box and TRAF-like domains	[more]
AT3G61790.1	9.9e-132	74.15	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	2.4e-130	69.31	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	2.0e-100	78.43	TRAF-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 46..111 e-value: 7.7E-8 score: 33.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 112..166 e-value: 1.9E-18 score: 68.4
IPR008974	TRAF-like	GENE3D	2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	coord: 167..300 e-value: 6.5E-38 score: 131.5
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 101..300 e-value: 6.5E-81 score: 271.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR10315:SF95	E3 UBIQUITIN-PROTEIN LIGASE SINAT1-RELATED	coord: 2..307
None	No IPR available	PANTHER	PTHR10315	E3 UBIQUITIN PROTEIN LIGASE SIAH	coord: 2..307
None	No IPR available	CDD	cd03829	Sina	coord: 173..301 e-value: 1.06229E-61 score: 190.29
None	No IPR available	CDD	cd16571	RING-HC_SIAHs	coord: 57..95 e-value: 1.02574E-12 score: 59.6058
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 112..304
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 53..100
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 59..95 score: 9.715714
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 112..172 score: 14.569479

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013989.1	Sed0013989.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding