Sed0013972 (gene) Chayote v1

Overview


Name	Sed0013972
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ATP synthase mitochondrial F1 complex assembly factor 1
Location	LG10: 1553099 .. 1556198 (-)
RNA-Seq Expression	Sed0013972
Synteny	Sed0013972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAAAGGGCGAGCTCAAATCTGCGTTCTTCAGACTCAGTGCAATACGCGCGCTTAGTGACGATGGTCTCAAAACTCATAGCAGAGTTGAAGCTCCAATCGCACACAAATTGTTTGATAAAATGTCTACTCTAAACACCTTTTGATATTACATTGCATAAGCTCGGAACATTGAGCTAGGGTTTCACGGCAGGGACCCCAATTCCTTGCAATCGTCGTTGAAACATTGTTTACCCAATTGATTGTTCATTTTTACTTCTCCGAGATGCGAATCTCTTCGTTACGAATATTGAGGACTCTTCTCACTAGTGCTTTGCCAGCGGTTCGACATTCTTCTCGATCCTATTTTGCTAATGTGAGTGTTGTGAATCTGCATAAGGAAGCTATTCCATGTGATTTTCTCAAATGGGGTTCGATTGGTTTCTTTCGGACTTCAAAATTTGCTACTGGGTTCACTCCATTGCAACCGAAGCCGTTGGATTCGATTATTGATATGGAGAGAGTGAAAGATCGGTCACCGGAGGATCTTGCTTCCATTTGGGATGATGTAATGTTTCTTATTCTCCTTTTTTTTTTTTTTGCTTAATTTCAGCCCCAAAATTGGTTTTGGCTTGTAAGATTTTAATGTAGTTTACTTTATAGTCGAACTCTATAGCATCAAGGGATTGGGTTAATTTGTTAGAAGGGATCAACGTGCGAGAAAATACATTTGTTGTGAATGCAAGAGTAGATTCTAGAACCGAGCAACAAATTATTCTTCAAGGATTTATGAGTTAGAAGTTCATCAATGGACGTAGTTGTTTTTGCTTAGTTGGCTTACTTCCCAGCTCAAACTTTAGTTAAATGTTATCAATATTAGTAACTTGAGGTAACCATCATGGACTTGGACTGGCCCAGTGGTCTCGAAGGGCCTTTAAGTAATTGAGAGGTAATGAATTCAATCCATAGTGACCACCTAACTAGGATTTCATTGCTTTTGAAGGGTTAGGCAATGTCCTTGACAATAGTCGAGGTACACGAAAGCTGACCCGGATAACAGATACTCATGGATAAAATAAAACTATTAGTAACTCGAGGTTATATTCCCCCCTCTTATTCCCCGTACATGCAAACTCTCACATTCTTTTGCTGGGTTTTGCTTTGCCAGTATCATTTGGGAAGAGGTCATATTGGGGTATTGATGAAAACTAAACTGTATCATTTATTGGAACAACGAGATGTAGATTGGTAACTATCGAACATTTTGGAAATGCTCTTCGAGTTATATTTCAGTATTTTTCTATTCTAAGTTAAGTGCAATCTTGCAGCCGATACTTTGTTATTCCTTTGTGGCGAGGCAGCGGTTATACTACCATGTTCGTTCAAGGTTTGGTCTTTAACTCATGGCTTTAAGTTATCTGTTTATATAATTATAAATAGAAAGAGGCCTGATCTGAAAGTTATATGATATGATATGATGCTATTACTTAATCCTTCGATGTGCTTTATTTTATTTTTCTCCCTCTTTCTTTGTATGTAGTTAGAATAATATTCCAAGAAACAATGAATATTCATAGCAATTAGAGTAAACCTTTGACGAATTATCCATCATCTGATTTGTTTTACCTATAGTCAACTACAGTGGAACATGATAGGATTTAAATTTGAGTGAATGTCTCATGCTGCTAATGAACCCTAAAATTTCTTAGAAGAACATTTTGGCTTTGAAACCGTTGTGTCAAGGCCGGTGCTGCCCGTGGGACCTAGGTGTTGCATTCTCTGTAGGAGCATGTGAGGTTTGGTGTCATTAAATTGTATAGAGTTGATCAAGGACTTCTTCCTTTAACATCCCTTTAGCTAGAAGAGAGTTTTGTGACAAGCTGGAATGCTCGCTATTTCATGGGGCTTTAGGGAGAGAGGAACAAATATAATATTTTGAGAGATTGAGATATCGATATGTGATGTTTGCTTCTTTATTAGATTTTATGTTTCTCTTTGAACTTTGGCGGTGAAGCTTTTTTTGTAATTATTCTTTAACTCTTATTTCGCTTGATTGAGACCCTTTTGTAGGTTTCCCTTTTTTGGGGGGCTTTCTTTTTTGTATGCCATTTTTTTTTCTCTTTCCGGAAGCTTTGATTCTACATTAAAAAAAGGACTTCGGAAAATGGTAGGATACCAACCTTTCAACTCATAAGCCTGATTTGTGAATTACGTTTATCTAGCTTTGGTGTTTCAAAGAAATCAAATTTCTTCTACTATGATGAACTTATTGCTTTGGGGGAGGGTCTTACATCTGGATAAATCAATTGCTCAGTCTCATCTTTGCTTCTTGTGATGTCTTTGAGTATAGAAGTGTGAAAGTGCTGCAAAATTGTTATATAACGAAATCTTAAGTATATTTTGAGCTGTGGGATATGAAACACATAATCGAATCCTATCAGCAACACATATGGTTCAATTCAAATGCTTAACTCGGCTACAAATGTAATTCACTTTGCAGTACAAATGCCGCACATCCTTTTCACTAGCCTTGAAGATTACAAGGTAAGAGGAACTCAAACAGCTCCCTACTTCACCGTGTCCTATTATAAAGAATTTGCAGAGAGCAAAGATTTGATGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTCACCGACTGGGAGGCAGAACGACTTTTAGAGACCGCCCGATCCTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGTACGGTTCAACCGACAAACACGTGATTTTGAGTTCAAGGATGTGTTACAAGCTCTGGAAATGCCCATTCTATGATTTGTCCCTAACTTGGCAGGGAAGAGGGCCCTCTAGGAGGTAATAAGAAATTTAGCAGGAAATGTCATATAAGGCCACTATTTATAATTATTCATAACTTTGTATAGTCTGTTTCTGACTTGTTTAGGGAGAATAATCATATGCTTTATTCTTGATATGGTAAGTTCCTATAATTTGAGAAGTGTTCCCAGCAGAAAGGAAGTAAACAACTAATTAGTCAACATAAATATTGTTTTTTGCCTAAAGAATGGGAATTATTTTTAAATTTTTTTTTTAATGTGTAATGAATTATTAAAGGGAAATAGTTCATAATCTG

mRNA sequence

ATTCAAAGGGCGAGCTCAAATCTGCGTTCTTCAGACTCAGTGCAATACGCGCGCTTAGTGACGATGGTCTCAAAACTCATAGCAGAGTTGAAGCTCCAATCGCACACAAATTGTTTGATAAAATGTCTACTCTAAACACCTTTTGATATTACATTGCATAAGCTCGGAACATTGAGCTAGGGTTTCACGGCAGGGACCCCAATTCCTTGCAATCGTCGTTGAAACATTGTTTACCCAATTGATTGTTCATTTTTACTTCTCCGAGATGCGAATCTCTTCGTTACGAATATTGAGGACTCTTCTCACTAGTGCTTTGCCAGCGGTTCGACATTCTTCTCGATCCTATTTTGCTAATGTGAGTGTTGTGAATCTGCATAAGGAAGCTATTCCATGTGATTTTCTCAAATGGGGTTCGATTGGTTTCTTTCGGACTTCAAAATTTGCTACTGGGTTCACTCCATTGCAACCGAAGCCGTTGGATTCGATTATTGATATGGAGAGAGTGAAAGATCGGTCACCGGAGGATCTTGCTTCCATTTGGGATGATTATCATTTGGGAAGAGGTCATATTGGGGTATTGATGAAAACTAAACTGTATCATTTATTGGAACAACGAGATGTAGATTGCCGATACTTTGTTATTCCTTTGTGGCGAGGCAGCGGTTATACTACCATGTTCGTTCAAGTACAAATGCCGCACATCCTTTTCACTAGCCTTGAAGATTACAAGGTAAGAGGAACTCAAACAGCTCCCTACTTCACCGTGTCCTATTATAAAGAATTTGCAGAGAGCAAAGATTTGATGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTCACCGACTGGGAGGCAGAACGACTTTTAGAGACCGCCCGATCCTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGTACGGTTCAACCGACAAACACGTGATTTTGAGTTCAAGGATGTGTTACAAGCTCTGGAAATGCCCATTCTATGATTTGTCCCTAACTTGGCAGGGAAGAGGGCCCTCTAGGAGGTAATAAGAAATTTAGCAGGAAATGTCATATAAGGCCACTATTTATAATTATTCATAACTTTGTATAGTCTGTTTCTGACTTGTTTAGGGAGAATAATCATATGCTTTATTCTTGATATGGTAAGTTCCTATAATTTGAGAAGTGTTCCCAGCAGAAAGGAAGTAAACAACTAATTAGTCAACATAAATATTGTTTTTTGCCTAAAGAATGGGAATTATTTTTAAATTTTTTTTTTAATGTGTAATGAATTATTAAAGGGAAATAGTTCATAATCTG

Coding sequence (CDS)

ATGCGAATCTCTTCGTTACGAATATTGAGGACTCTTCTCACTAGTGCTTTGCCAGCGGTTCGACATTCTTCTCGATCCTATTTTGCTAATGTGAGTGTTGTGAATCTGCATAAGGAAGCTATTCCATGTGATTTTCTCAAATGGGGTTCGATTGGTTTCTTTCGGACTTCAAAATTTGCTACTGGGTTCACTCCATTGCAACCGAAGCCGTTGGATTCGATTATTGATATGGAGAGAGTGAAAGATCGGTCACCGGAGGATCTTGCTTCCATTTGGGATGATTATCATTTGGGAAGAGGTCATATTGGGGTATTGATGAAAACTAAACTGTATCATTTATTGGAACAACGAGATGTAGATTGCCGATACTTTGTTATTCCTTTGTGGCGAGGCAGCGGTTATACTACCATGTTCGTTCAAGTACAAATGCCGCACATCCTTTTCACTAGCCTTGAAGATTACAAGGTAAGAGGAACTCAAACAGCTCCCTACTTCACCGTGTCCTATTATAAAGAATTTGCAGAGAGCAAAGATTTGATGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTCACCGACTGGGAGGCAGAACGACTTTTAGAGACCGCCCGATCCTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGTACGGTTCAACCGACAAACACGTGATTTTGAGTTCAAGGATGTGTTACAAGCTCTGGAAATGCCCATTCTATGA

Protein sequence

MRISSLRILRTLLTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGFFRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHLLEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEFAESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVLQALEMPIL

Homology

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BLAST of Sed0013972 vs. NCBI nr
Match: XP_038883536.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Benincasa hispida])

HSP 1 Score: 414.8 bits (1065), Expect = 4.9e-112
Identity = 205/248 (82.66%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MRISSLRI-------LRTLLTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSLR        ++TLL SA P VR SSRSYFANV +  L KEAIPCDFLKW S+GF
Sbjct: 1   MRSSSLRTSRTIAGSVKTLLASASPVVRQSSRSYFANVRLEKLQKEAIPCDFLKWSSLGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTS+FATGF PLQPKPLDSIIDMER KDRSPEDLASIWDDYHLGRGHIGV MK KLYHL
Sbjct: 61  FRTSRFATGFAPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGVSMKAKLYHL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LEQR  DCRYFVIP+WRGSGYTTMFVQVQ+P+ILFT LEDYK RGTQ APYFTVSYYKEF
Sbjct: 121 LEQRAADCRYFVIPMWRGSGYTTMFVQVQLPYILFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+L+RGDIVFTSKLTD EAE LLET +SFYLNDVRYKL+ RFNRQTRDFEFKDVL
Sbjct: 181 AESKDLVLVRGDIVFTSKLTDQEAEWLLETTQSFYLNDVRYKLLERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QALEMPIL
Sbjct: 241 QALEMPIL 248

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BLAST of Sed0013972 vs. NCBI nr
Match: XP_008439782.1 (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 1.9e-111
Identity = 206/248 (83.06%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSLR LRT+       L S+ P VR SSRSYFAN+S+  L KEA P DFLKW S+GF
Sbjct: 1   MRSSSLRTLRTIAGSVKTVLASSSPVVRQSSRSYFANLSLGKLQKEANPSDFLKWSSLGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTSKFATGFTPLQPKPL+SIIDMERVKDRSPEDLASIWDDYHLGRGHIG+ MK KLYHL
Sbjct: 61  FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LE R  DCRYFVIPLWRGSGYTTMFVQVQMPHI+FT LEDYK RGTQ APYFTVSYYKEF
Sbjct: 121 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLNDVRYKLV RFNRQTRDFEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

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BLAST of Sed0013972 vs. NCBI nr
Match: KAA0052644.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo var. makuwa] >TYK13182.1 ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 9.3e-111
Identity = 205/248 (82.66%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSLR LRT+       L S+ P VR SSRSYFAN+S+  L KEA P DFLKW S+GF
Sbjct: 1   MRSSSLRTLRTIAGSVKTVLASSSPVVRQSSRSYFANLSLGKLQKEANPSDFLKWSSLGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTSKFATGFTPLQPKPL+SIIDMERVKDRSPEDLASIWDDYHLGRGHIG+ MK KLY+L
Sbjct: 61  FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYYL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LE R  DCRYFVIPLWRGSGYTTMFVQVQMPHI+FT LEDYK RGTQ APYFTVSYYKEF
Sbjct: 121 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLNDVRYKLV RFNRQTRDFEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

[Close]

BLAST of Sed0013972 vs. NCBI nr
Match: XP_023544293.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.3 bits (1048), Expect = 4.6e-110
Identity = 203/248 (81.85%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSLR LRT+       L SALPAVR SSRSYF NVS+  L KEAIPCDFLKW SIGF
Sbjct: 1   MRSSSLRTLRTIAGSAKFFLASALPAVRQSSRSYFVNVSLEKLQKEAIPCDFLKWCSIGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTS+FA+GF PLQ KPLDSI+DME+ KDRSPEDLASIWDDYHLGRGHIG  MK KLYHL
Sbjct: 61  FRTSRFASGFAPLQQKPLDSIMDMEKAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LEQR  DCR+FVIPLWRGSGYTTMFVQVQMP+ILFT LEDYK RGTQ APYFTV+YYKEF
Sbjct: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           +ESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLND RYKLV RFN+QTRDFEFKDVL
Sbjct: 181 SESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVERFNKQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QALEMPIL
Sbjct: 241 QALEMPIL 248

[Close]

BLAST of Sed0013972 vs. NCBI nr
Match: XP_004134937.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis sativus] >KGN49278.1 hypothetical protein Csa_003090 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-109
Identity = 202/248 (81.45%), Postives = 213/248 (85.89%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSL+ LRT+       + S+ P VR SSRSYFAN S+  L KE  P DFLKW S+GF
Sbjct: 1   MRSSSLQTLRTIAGSVKTVIASSSPVVRQSSRSYFANPSLGKLQKETNPSDFLKWSSLGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTSKFATGF PLQPKPLDSIIDMER KDRSPEDLASIWDDYHLGRGHIG+ MK KLYHL
Sbjct: 61  FRTSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LEQR  DCRYFVIPLWRGSGYTTMFVQVQ PHI+FT LEDYK RGTQ APYFTVSYYKEF
Sbjct: 121 LEQRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLNDVRYKLV RFNRQTRDFEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

[Close]

BLAST of Sed0013972 vs. ExPASy Swiss-Prot
Match: Q811I0 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Mus musculus OX=10090 GN=Atpaf1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-13
Identity = 56/199 (28.14%), Postives = 94/199 (47.24%), Query Frame = 0


Query: 41  IPCDFLKWGSIGFFRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRG 100
           I C   K  ++G    SK   GFT  + K L S+ ++E VKD++ E++  IW  Y   + 
Sbjct: 115 IKCMEQKTDALGKQPVSK---GFT--KDKTLSSVFNVEMVKDKTAEEIKQIWQQYFSAKD 174

Query: 101 HIGVLMKTKLYHLLEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQ 160
            +  ++  + + L+  R   C  F+  L R  GY     Q     + FT+L + + RG  
Sbjct: 175 TVYAVIPKEKFDLIWNRAQSCPTFLCALPRRDGYEFFVGQWTGTELHFTALINIQTRGDA 234

Query: 161 TAPYFTVSYYKEFAESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVR--YKLVV 220
            A    + +Y E  E K ++L+  ++  T  L   EA+ +    + FY  D +  Y LV 
Sbjct: 235 AASQLILYHYPELKEEKGIVLMTAEMDSTF-LNVVEAQCIANQVQLFYATDRKEIYGLVE 294

Query: 221 RFNRQTRDFEFKDVLQALE 238
            FN +  +F++  V+  LE
Sbjct: 295 TFNFRPNEFKYMSVIAELE 307

[Close]

BLAST of Sed0013972 vs. ExPASy Swiss-Prot
Match: Q5TC12 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Homo sapiens OX=9606 GN=ATPAF1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-13
Identity = 50/178 (28.09%), Postives = 86/178 (48.31%), Query Frame = 0


Query: 62  GFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHLLEQRDVDC 121
           GFT  + K L SI ++E VK+++ E++  IW  Y   +  +  ++  + + L+  R   C
Sbjct: 137 GFT--KDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSC 196

Query: 122 RYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEFAESKDLML 181
             F+  L R  GY     Q     + FT+L + + RG   A    + +Y E  E K ++L
Sbjct: 197 PTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELKEEKGIVL 256

Query: 182 IRGDIVFTSKLTDWEAERLLETARSFYLNDVR--YKLVVRFNRQTRDFEFKDVLQALE 238
           +  ++  T  L   EA+ +    + FY  D +  Y LV  FN +  +F++  V+  LE
Sbjct: 257 MTAEMDSTF-LNVAEAQCIANQVQLFYATDRKETYGLVETFNLRPNEFKYMSVIAELE 311

[Close]

BLAST of Sed0013972 vs. ExPASy Swiss-Prot
Match: Q66JD1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Xenopus tropicalis OX=8364 GN=atpaf1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 53/206 (25.73%), Postives = 99/206 (48.06%), Query Frame = 0


Query: 46  LKWGSIGFFRTSKFA------------TGFTPLQPKPLDSIIDMERVKDRSPEDLASIWD 105
           LK   +G+ + ++FA             GF+  + K LDSI+++E +KD+  +++  IW 
Sbjct: 80  LKQQPLGYSKQAEFAKTVEEKVGTASGKGFS--KNKTLDSILNIELIKDKDADEIREIWK 139

Query: 106 DYHLGRGHIGVLMKTKLYHLLEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLED 165
            Y   R  +  ++  + + L+ +R   C  F+  L R  GY     Q     + FT+L +
Sbjct: 140 QYFSLRNSVYAVIPGESFELIWRRAKTCPSFLYALPRKEGYEFFVGQWSGSELHFTALIN 199

Query: 166 YKVRGTQTAPYFTVSYYKEFAESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLND-- 225
            +  G        + +Y EF + K ++L+  +I  T  L   +A+ L    + FY +D  
Sbjct: 200 IQTAGDAAPSQLILYHYPEFQKDKGIVLMTSEI-DTKFLNVQDAQCLANQVQLFYGSDGA 259

Query: 226 VRYKLVVRFNRQTRDFEFKDVLQALE 238
             + LV +FN ++ +F++  V+  LE
Sbjct: 260 ETFGLVEKFNHKSDEFKYMAVVSFLE 282

[Close]

BLAST of Sed0013972 vs. ExPASy Swiss-Prot
Match: P87127 (Protein atp11, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atp11 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-09
Identity = 46/181 (25.41%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 71  LDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHLLEQRDVDCRYFVIPLWR 130
           L+  ID+E++K+     +  +W   ++G   +   +  ++Y  +  R     YFV+PL R
Sbjct: 106 LNRYIDVEKIKELPTSTIEKLWRARNIGDDILSACIPKEIYEKMLSRARMYPYFVLPLPR 165

Query: 131 G-SGYTTMFVQVQMP-----HILFTSLEDYKVRGTQTAPYFTVSYYKEFAESKDLMLIRG 190
           G  G  + F+Q   P     H+L TSL +YK++G+  AP+  + ++ +    K + L+R 
Sbjct: 166 GDKGIESHFLQWNFPNKNEAHLLVTSLLEYKLKGSYAAPHTIMLHFADLLNLKGITLMRC 225

Query: 191 DIVFTSKLTDWEAERLLETARSFY-------LNDVRYKLVVRFNRQTRDFEFKDVLQALE 239
                 KL+  + + L+   + FY       L   R  L+  F++   DF+   V   ++
Sbjct: 226 QFE-PKKLSANDVQLLVLAIQKFYNASENTPLGKERLALLAAFSKGA-DFDLHKVATHMD 284

[Close]

BLAST of Sed0013972 vs. ExPASy TrEMBL
Match: A0A1S3AZK5 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo OX=3656 GN=LOC103484474 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.1e-112
Identity = 206/248 (83.06%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSLR LRT+       L S+ P VR SSRSYFAN+S+  L KEA P DFLKW S+GF
Sbjct: 1   MRSSSLRTLRTIAGSVKTVLASSSPVVRQSSRSYFANLSLGKLQKEANPSDFLKWSSLGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTSKFATGFTPLQPKPL+SIIDMERVKDRSPEDLASIWDDYHLGRGHIG+ MK KLYHL
Sbjct: 61  FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LE R  DCRYFVIPLWRGSGYTTMFVQVQMPHI+FT LEDYK RGTQ APYFTVSYYKEF
Sbjct: 121 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLNDVRYKLV RFNRQTRDFEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

[Close]

BLAST of Sed0013972 vs. ExPASy TrEMBL
Match: A0A5A7UBA1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007940 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.5e-111
Identity = 205/248 (82.66%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSLR LRT+       L S+ P VR SSRSYFAN+S+  L KEA P DFLKW S+GF
Sbjct: 1   MRSSSLRTLRTIAGSVKTVLASSSPVVRQSSRSYFANLSLGKLQKEANPSDFLKWSSLGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTSKFATGFTPLQPKPL+SIIDMERVKDRSPEDLASIWDDYHLGRGHIG+ MK KLY+L
Sbjct: 61  FRTSKFATGFTPLQPKPLNSIIDMERVKDRSPEDLASIWDDYHLGRGHIGISMKAKLYYL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LE R  DCRYFVIPLWRGSGYTTMFVQVQMPHI+FT LEDYK RGTQ APYFTVSYYKEF
Sbjct: 121 LEHRAADCRYFVIPLWRGSGYTTMFVQVQMPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLNDVRYKLV RFNRQTRDFEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

[Close]

BLAST of Sed0013972 vs. ExPASy TrEMBL
Match: A0A0A0KI74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518330 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 202/248 (81.45%), Postives = 213/248 (85.89%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSL+ LRT+       + S+ P VR SSRSYFAN S+  L KE  P DFLKW S+GF
Sbjct: 1   MRSSSLQTLRTIAGSVKTVIASSSPVVRQSSRSYFANPSLGKLQKETNPSDFLKWSSLGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTSKFATGF PLQPKPLDSIIDMER KDRSPEDLASIWDDYHLGRGHIG+ MK KLYHL
Sbjct: 61  FRTSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LEQR  DCRYFVIPLWRGSGYTTMFVQVQ PHI+FT LEDYK RGTQ APYFTVSYYKEF
Sbjct: 121 LEQRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGLEDYKARGTQAAPYFTVSYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLNDVRYKLV RFNRQTRDFEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QAL+MPIL
Sbjct: 241 QALDMPIL 248

[Close]

BLAST of Sed0013972 vs. ExPASy TrEMBL
Match: A0A6J1EJC6 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111433127 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 203/248 (81.85%), Postives = 215/248 (86.69%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSLR LRT+       L SA PAVR SSRSYFANVS+  L KEAIPCDFLKW SIGF
Sbjct: 1   MRSSSLRTLRTIAGSAKFFLASASPAVRQSSRSYFANVSLEKLQKEAIPCDFLKWCSIGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTS+FA+GF PLQ KPLDSI+DMER KDRSPEDLASIWDDYHLGRGHIG  MK KLYHL
Sbjct: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LEQR  DCR+FVIPLWRGSGYTTMFVQVQMP+ILFT LEDYK RGTQ APYFTV+YYKEF
Sbjct: 121 LEQRAADCRHFVIPLWRGSGYTTMFVQVQMPYILFTGLEDYKARGTQAAPYFTVAYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLND RYKLV RFN+QT +FEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDEEAEWLLETTQSFYLNDARYKLVERFNKQTHEFEFKDVL 240

Query: 241 QALEMPIL 242
           QALEMPIL
Sbjct: 241 QALEMPIL 248

[Close]

BLAST of Sed0013972 vs. ExPASy TrEMBL
Match: A0A6J1IR42 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111478614 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.9e-109
Identity = 203/248 (81.85%), Postives = 215/248 (86.69%), Query Frame = 0


Query: 1   MRISSLRILRTL-------LTSALPAVRHSSRSYFANVSVVNLHKEAIPCDFLKWGSIGF 60
           MR SSLR LRT+       L SA PAVR SSRSYFANVS+  L KEAIPCDFLKW SIGF
Sbjct: 1   MRSSSLRTLRTIAGSAKNFLASASPAVRQSSRSYFANVSLEKLQKEAIPCDFLKWCSIGF 60

Query: 61  FRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDYHLGRGHIGVLMKTKLYHL 120
           FRTS+FA+GF PLQ KPLDSI+DMER KDRSPEDLASIWDDYHLGRGHIG  MK KLYHL
Sbjct: 61  FRTSRFASGFAPLQQKPLDSIMDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHL 120

Query: 121 LEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYKVRGTQTAPYFTVSYYKEF 180
           LEQR  DCR+FVIPLWRGSGYTTMFVQVQMP+IL T LEDYK RGTQ APYFTV+YYKEF
Sbjct: 121 LEQRASDCRHFVIPLWRGSGYTTMFVQVQMPYILLTGLEDYKARGTQAAPYFTVAYYKEF 180

Query: 181 AESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYKLVVRFNRQTRDFEFKDVL 240
           AESKDL+LIRGDIVFTSKLTD EAE LLET +SFYLND RYKLV +FN+QTRDFEFKDVL
Sbjct: 181 AESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDARYKLVEQFNKQTRDFEFKDVL 240

Query: 241 QALEMPIL 242
           QALEMPIL
Sbjct: 241 QALEMPIL 248

[Close]

BLAST of Sed0013972 vs. TAIR 10
Match: AT2G34050.1 (INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). )

HSP 1 Score: 306.2 bits (783), Expect = 2.3e-83
Identity = 138/206 (66.99%), Postives = 171/206 (83.01%), Query Frame = 0


Query: 36  LHKEAIPCDFLKWGSIGFFRTSKFATGFTPLQPKPLDSIIDMERVKDRSPEDLASIWDDY 95
           L + ++P + +KW S+G  R S+FA+GFTPLQ KPLDSI+D+ R K +SPE+L SIWDDY
Sbjct: 43  LSEASLPGNHIKWASLGSVRNSRFASGFTPLQQKPLDSIMDLARAKTKSPEELTSIWDDY 102

Query: 96  HLGRGHIGVLMKTKLYHLLEQRDVDCRYFVIPLWRGSGYTTMFVQVQMPHILFTSLEDYK 155
           HLGRGHIG+ MK +LY LLEQR  +CRYFVIPLWRG+GY TMF QV+ PH++FT LEDYK
Sbjct: 103 HLGRGHIGLTMKAQLYRLLEQRASECRYFVIPLWRGNGYITMFAQVEAPHMIFTGLEDYK 162

Query: 156 VRGTQTAPYFTVSYYKEFAESKDLMLIRGDIVFTSKLTDWEAERLLETARSFYLNDVRYK 215
            RGTQ APY T ++Y E +E+KDL+ IRGD+VFTSKLTD EA+ ++ETA+SFYLND RYK
Sbjct: 163 ARGTQAAPYLTTTFYTELSETKDLVFIRGDVVFTSKLTDEEAKWIMETAQSFYLNDSRYK 222

Query: 216 LVVRFNRQTRDFEFKDVLQALEMPIL 242
           L+ RFN+ T DFEFKDVLQAL+MP+L
Sbjct: 223 LLERFNKHTHDFEFKDVLQALDMPLL 248

The following BLAST results are available for this feature:

BLAST of Sed0013972 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883536.1	4.9e-112	82.66	ATP synthase mitochondrial F1 complex assembly factor 1 [Benincasa hispida]	[more]
XP_008439782.1	1.9e-111	83.06	PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo...	[more]
KAA0052644.1	9.3e-111	82.66	ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo var. makuw...	[more]
XP_023544293.1	4.6e-110	81.85	ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita pepo subsp. p...	[more]
XP_004134937.1	2.3e-109	81.45	ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis sativus] >KGN49...	[more]

BLAST of Sed0013972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q811I0	1.1e-13	28.14	ATP synthase mitochondrial F1 complex assembly factor 1 OS=Mus musculus OX=10090...	[more]
Q5TC12	3.2e-13	28.09	ATP synthase mitochondrial F1 complex assembly factor 1 OS=Homo sapiens OX=9606 ...	[more]
Q66JD1	2.1e-12	25.73	ATP synthase mitochondrial F1 complex assembly factor 1 OS=Xenopus tropicalis OX...	[more]
P87127	2.1e-09	25.41	Protein atp11, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Sed0013972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZK5	9.1e-112	83.06	ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo OX=3656 ...	[more]
A0A5A7UBA1	4.5e-111	82.66	ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo var. mak...	[more]
A0A0A0KI74	1.1e-109	81.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518330 PE=3 SV=1	[more]
A0A6J1EJC6	1.1e-109	81.85	ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita moschata OX...	[more]
A0A6J1IR42	1.9e-109	81.85	ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita maxima OX=3...	[more]

BLAST of Sed0013972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34050.1	2.3e-83	66.99	INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; E...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010591	ATP11	PFAM	PF06644	ATP11	coord: 67..232 e-value: 2.0E-30 score: 106.5
IPR010591	ATP11	PANTHER	PTHR13126	CHAPERONE ATP11	coord: 14..241
None	No IPR available	PANTHER	PTHR13126:SF1	BNAA04G19940D PROTEIN	coord: 14..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013972.1	Sed0013972.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly
biological_process	GO:0065003	protein-containing complex assembly
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005739	mitochondrion