Sed0013970 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGGATTTTTCTATTCATCTCCTCACTCCAAAGCTGATCCAAAGGCAGTAGAAAAAATTAAGGTAATTAAATTACAAACCTCTAAATTAAAGCTTCATGATATATAGTTTCCTTCCTTCATATTAATAGTACTATGATTTTGCAGAACCATAGGACAATAATTTATCCAAAAGGCTTGTCCATCACATGGGGCAATGATAATCGCTACTGGTCCTTGCCTCGTCCATCCCATAACTCGTAAGCTGCTTTGTTCATTCTTCTGTTGATAGCATGTCGATATTTTCATTTTGTATTTTTTTTAGTTCAATACTATTTAGGTGAGCATTTCAAATCTATACCATCTTGATTACTAAGTCGTATGTAATATCAATAGAGTTTTGCTCCTTTTTGCATCGGCTTATATAGTCAACAAAGTAACAAAATATAAAGGAATAGAATAATATCTATGCTAATTAACATTGATGATAAAGATTTCTAGACTACTTGCAAAACTAGTAACACATTTATTAACAAAATAGATCAACATTGATAGACTTTTATAGTGATACTTAGGGGGCGTTTTTGGTAATTTATAAACAATCGAGTAACCCACCTACTTTGAAATTAATTCTTTAAAAGTTTTTTTGATATTCAAATTGTAAAATTAGAGAGTATGTTTCGTAAAATTAATCGAGATGCACGCAACTGCCTAGAAACTCATGGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAACTACTTTTAATGGCGCAATGGTTTCATTGTTTGGTTGTAAACCAGTTCAACACCGGCGTCATAGGGTCGAGCCCGAGAGTCGGTATATTTGTCCCCCTCTCTAATATGTACTAAAAAAAACTTCCCAAGAAAGGCTTTTTTTGGTAATTTAACAAAATCCACACTATTGTTTTTGCCATATTTGCAGTTCTCTTTCCACTTTTATAGTTGTTCTTCTTTTTTCTTTTTGATGCAAACGCTCGTACATAGAAAACAAAAAATATATTTGAAAAATGACCTATTTTAACAAAAAAAAAATTAGAAAATAATTCATTTTGACAAATTACCCTATATCTAGCTATTATTTTCGTTTGAAGACTTCTATGGTCAATAACATATGATATTGAACCTTGTTTAGATTACTTCGTAGGAAGAAAAACTCGAGTGTGGCGGCAGAGCTGCTACAAGTGTCATGGCTAGAGGTTACGTGTTCGACCGACAATGTAGAAGTCGGGAAAAGCTATAGAGTCGGGTTCAACGTGTCGATGAGGGCAGGGGCATTTGGATGGAAAGGGTGTGAAGTTTACATCATGGCAAAGATAGGAAAGGCAGGGAAATTCGTGTACAAGAAAATGTGTATCGACAACAAATGTGGTGATGACAAGAAGTTCAATATGCCGGAGGAGGATCTCATTATCACCGTGAAAGCTCCGGCGAGCTCGCCGGGAGACAATCATCTCTACTTTGGAATGTATGAGGTTTGGAATGGGTGGTGGAAGGGCGGACTCCAAATTCACCATGCATTTGTTGACAAGGTTGGGAACTAG ATGGTTGGATTTTTCTATTCATCTCCTCACTCCAAAGCTGATCCAAAGGCAGTAGAAAAAATTAAGAACCATAGGACAATAATTTATCCAAAAGGCTTGTCCATCACATGGGGCAATGATAATCGCTACTGGTCCTTGCCTCGTCCATCCCATAACTCGAAGAAAAACTCGAGTGTGGCGGCAGAGCTGCTACAAGTGTCATGGCTAGAGGTTACGTGTTCGACCGACAATGTAGAAGTCGGGAAAAGCTATAGAGTCGGGTTCAACGTGTCGATGAGGGCAGGGGCATTTGGATGGAAAGGGTGTGAAGTTTACATCATGGCAAAGATAGGAAAGGCAGGGAAATTCGTGTACAAGAAAATGTGTATCGACAACAAATGTGGTGATGACAAGAAGTTCAATATGCCGGAGGAGGATCTCATTATCACCGTGAAAGCTCCGGCGAGCTCGCCGGGAGACAATCATCTCTACTTTGGAATGTATGAGGTTTGGAATGGGTGGTGGAAGGGCGGACTCCAAATTCACCATGCATTTGTTGACAAGGTTGGGAACTAG ATGGTTGGATTTTTCTATTCATCTCCTCACTCCAAAGCTGATCCAAAGGCAGTAGAAAAAATTAAGAACCATAGGACAATAATTTATCCAAAAGGCTTGTCCATCACATGGGGCAATGATAATCGCTACTGGTCCTTGCCTCGTCCATCCCATAACTCGAAGAAAAACTCGAGTGTGGCGGCAGAGCTGCTACAAGTGTCATGGCTAGAGGTTACGTGTTCGACCGACAATGTAGAAGTCGGGAAAAGCTATAGAGTCGGGTTCAACGTGTCGATGAGGGCAGGGGCATTTGGATGGAAAGGGTGTGAAGTTTACATCATGGCAAAGATAGGAAAGGCAGGGAAATTCGTGTACAAGAAAATGTGTATCGACAACAAATGTGGTGATGACAAGAAGTTCAATATGCCGGAGGAGGATCTCATTATCACCGTGAAAGCTCCGGCGAGCTCGCCGGGAGACAATCATCTCTACTTTGGAATGTATGAGGTTTGGAATGGGTGGTGGAAGGGCGGACTCCAAATTCACCATGCATTTGTTGACAAGGTTGGGAACTAG MVGFFYSSPHSKADPKAVEKIKNHRTIIYPKGLSITWGNDNRYWSLPRPSHNSKKNSSVAAELLQVSWLEVTCSTDNVEVGKSYRVGFNVSMRAGAFGWKGCEVYIMAKIGKAGKFVYKKMCIDNKCGDDKKFNMPEEDLIITVKAPASSPGDNHLYFGMYEVWNGWWKGGLQIHHAFVDKVGN Homology
BLAST of Sed0013970 vs. NCBI nr
Match: XP_008459052.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043222.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa] >TYK21342.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa]) HSP 1 Score: 317.8 bits (813), Expect = 6.3e-83 Identity = 148/185 (80.00%), Postives = 163/185 (88.11%), Query Frame = 0
BLAST of Sed0013970 vs. NCBI nr
Match: XP_038895151.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80 Identity = 145/185 (78.38%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of Sed0013970 vs. NCBI nr
Match: XP_011660313.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66885.1 hypothetical protein Csa_007686 [Cucumis sativus]) HSP 1 Score: 307.8 bits (787), Expect = 6.5e-80 Identity = 143/185 (77.30%), Postives = 159/185 (85.95%), Query Frame = 0
BLAST of Sed0013970 vs. NCBI nr
Match: XP_038896036.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 300.4 bits (768), Expect = 1.0e-77 Identity = 140/184 (76.09%), Postives = 155/184 (84.24%), Query Frame = 0
BLAST of Sed0013970 vs. NCBI nr
Match: XP_022994904.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]) HSP 1 Score: 294.7 bits (753), Expect = 5.7e-76 Identity = 140/184 (76.09%), Postives = 151/184 (82.07%), Query Frame = 0
BLAST of Sed0013970 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.1e-32 Identity = 76/182 (41.76%), Postives = 101/182 (55.49%), Query Frame = 0
BLAST of Sed0013970 vs. ExPASy Swiss-Prot
Match: O81865 (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.2e-05 Identity = 45/167 (26.95%), Postives = 71/167 (42.51%), Query Frame = 0
BLAST of Sed0013970 vs. ExPASy Swiss-Prot
Match: P0DSP5 (Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04 Identity = 25/83 (30.12%), Postives = 43/83 (51.81%), Query Frame = 0
BLAST of Sed0013970 vs. ExPASy TrEMBL
Match: A0A5A7TIT6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00100 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.0e-83 Identity = 148/185 (80.00%), Postives = 163/185 (88.11%), Query Frame = 0
BLAST of Sed0013970 vs. ExPASy TrEMBL
Match: A0A1S3CAI0 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498273 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.0e-83 Identity = 148/185 (80.00%), Postives = 163/185 (88.11%), Query Frame = 0
BLAST of Sed0013970 vs. ExPASy TrEMBL
Match: A0A0A0LYD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703580 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80 Identity = 143/185 (77.30%), Postives = 159/185 (85.95%), Query Frame = 0
BLAST of Sed0013970 vs. ExPASy TrEMBL
Match: A0A6J1K461 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490489 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.7e-76 Identity = 140/184 (76.09%), Postives = 151/184 (82.07%), Query Frame = 0
BLAST of Sed0013970 vs. ExPASy TrEMBL
Match: A0A6J1GSR3 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita moschata OX=3662 GN=LOC111457157 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.3e-75 Identity = 136/182 (74.73%), Postives = 153/182 (84.07%), Query Frame = 0
BLAST of Sed0013970 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33 Identity = 76/182 (41.76%), Postives = 101/182 (55.49%), Query Frame = 0
BLAST of Sed0013970 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30 Identity = 72/183 (39.34%), Postives = 98/183 (53.55%), Query Frame = 0
BLAST of Sed0013970 vs. TAIR 10
Match: AT4G19840.1 (phloem protein 2-A1 ) HSP 1 Score: 50.1 bits (118), Expect = 2.3e-06 Identity = 45/167 (26.95%), Postives = 71/167 (42.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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