Sed0013946 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCTCTCTAAAACCTCACCGAAATCTCTCAATGGCTCGTTTTACTCTCTTCACTTTGGCTCTGCTTTTGACCCTTCTATTCACATCACAAGCCGCCAGACCCCTCCCTACCACACAGGATACCCTCTTTCTGGCTGCCCTTCCCAAGGGCACTGTCCCTTCGTCCGCTCCCAGCAAGAAAGGCCACGCCGTCCTTGTCGACCAGAAGCTCACCGCCCGACGCCTCGGAGAGTCCGTTCCCAGCCCCGGCGTCGGCCATTAGGACTCTCTCTTCTTTTTCTTTAGTTTTGGGTATTCCATTTTATTCTTTCATATCTATCTTGTTGTATAGAATACAC CATCTCTCTAAAACCTCACCGAAATCTCTCAATGGCTCGTTTTACTCTCTTCACTTTGGCTCTGCTTTTGACCCTTCTATTCACATCACAAGCCGCCAGACCCCTCCCTACCACACAGGATACCCTCTTTCTGGCTGCCCTTCCCAAGGGCACTGTCCCTTCGTCCGCTCCCAGCAAGAAAGGCCACGCCGTCCTTGTCGACCAGAAGCTCACCGCCCGACGCCTCGGAGAGTCCGTTCCCAGCCCCGGCGTCGGCCATTAGGACTCTCTCTTCTTTTTCTTTAGTTTTGGGTATTCCATTTTATTCTTTCATATCTATCTTGTTGTATAGAATACAC ATGGCTCGTTTTACTCTCTTCACTTTGGCTCTGCTTTTGACCCTTCTATTCACATCACAAGCCGCCAGACCCCTCCCTACCACACAGGATACCCTCTTTCTGGCTGCCCTTCCCAAGGGCACTGTCCCTTCGTCCGCTCCCAGCAAGAAAGGCCACGCCGTCCTTGTCGACCAGAAGCTCACCGCCCGACGCCTCGGAGAGTCCGTTCCCAGCCCCGGCGTCGGCCATTAG MARFTLFTLALLLTLLFTSQAARPLPTTQDTLFLAALPKGTVPSSAPSKKGHAVLVDQKLTARRLGESVPSPGVGH Homology
BLAST of Sed0013946 vs. NCBI nr
Match: KAG7026512.1 (Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 100.5 bits (249), Expect = 6.5e-18 Identity = 60/82 (73.17%), Postives = 64/82 (78.05%), Query Frame = 0
BLAST of Sed0013946 vs. NCBI nr
Match: KAG7034658.1 (Precursor of CEP14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 93.6 bits (231), Expect = 7.9e-16 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0
BLAST of Sed0013946 vs. NCBI nr
Match: XP_028764797.1 (precursor of CEP14 [Prosopis alba]) HSP 1 Score: 74.7 bits (182), Expect = 3.8e-10 Identity = 50/98 (51.02%), Postives = 61/98 (62.24%), Query Frame = 0
BLAST of Sed0013946 vs. NCBI nr
Match: XP_027348625.1 (precursor of CEP14 [Abrus precatorius]) HSP 1 Score: 73.9 bits (180), Expect = 6.5e-10 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of Sed0013946 vs. NCBI nr
Match: KAF7803270.1 (precursor of CEP14 [Senna tora]) HSP 1 Score: 73.6 bits (179), Expect = 8.5e-10 Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of Sed0013946 vs. ExPASy Swiss-Prot
Match: Q52K95 (Precursor of CEP14 OS=Arabidopsis thaliana OX=3702 GN=CEP14 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-07 Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of Sed0013946 vs. ExPASy Swiss-Prot
Match: Q9FZ54 (Precursor of CEP13 OS=Arabidopsis thaliana OX=3702 GN=CEP13 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 8.5e-05 Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Sed0013946 vs. ExPASy TrEMBL
Match: A0A0A0KKF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519990 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13 Identity = 50/85 (58.82%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of Sed0013946 vs. ExPASy TrEMBL
Match: A0A7N2LQP2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09 Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of Sed0013946 vs. ExPASy TrEMBL
Match: A0A2N9HNI2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41175 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09 Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of Sed0013946 vs. ExPASy TrEMBL
Match: A0A438HH69 (Precursor of CEP14 OS=Vitis vinifera OX=29760 GN=CEP14_0 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.5e-09 Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of Sed0013946 vs. ExPASy TrEMBL
Match: A0A166CTC8 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_005145 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.5e-09 Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of Sed0013946 vs. TAIR 10
Match: AT1G29290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 1.0e-08 Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of Sed0013946 vs. TAIR 10
Match: AT1G16950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 6.1e-06 Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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