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Sed0013944 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACGGTTTCCTTGGATTTTCCTTCGGCTCTGTAGCCTCAAAGTTCTTTTTCTTCATCATCATCATCACAATTTCACCTTTTTTTTTTTCCTCTATTTTTCTCTCAGTTTTTTTTAATTTAAAATTCAGTAAATGACATCAAAATCAAATGGAGCAGCCACTTCCAAATCCGAATCGGAAACTGAGTGCTGCATGTGTGGAGATTTCGGCTTCTCCAACCAGCTTTTTCGCTGCAAAATCTGCCAATTCAGATCCCAACACAGGTAACCAATACATTCAATTTTTTTTCTTTTTTGGGGGTTTTTTAATTCTTAATTAATTTATGGGTTCATTTCAAATTCTCAGATATTGTAGCAATTTGTACCCAAAATCCGATTCTTACCTAATTTGCAATTGGTGCCTAACTCAAAAGGACGAATCAACAAAACCCAAGTCGCCAAATTCTTCGCCCTCAATAAAAAAGACCAAAATTGTCAATATCGCCTCTCACAAAGATCAAATTCGCAGTTTTGAATCCCAAGAAAATAGACCCATAAAAAAACAGAGGCTGCCGGAACTTTGTGAACGTCCGCCGCCGCCGCCGCCTCCGGCACGGCGGAGGGCACTCGCCGACGAGGACAAAATCCGGCGGAGTAGATCGGAGGAGATTTCGCGGCGAAGTGGGATTCAGCGGCAGGGGATTTTTAGAAACAAGGTCAGAAGATACAAACTTCTGGACGAGGTTTCCACCTGAATTATTATTATTATTATTATTATTATTATGCCTTTTACCCAGAAATATGACAAAATAAATAACTCAATAAATGATAGGGGAAAATGCATTTTTACTCCCTAC CACGGTTTCCTTGGATTTTCCTTCGGCTCTGTAGCCTCAAAGTTCTTTTTCTTCATCATCATCATCACAATTTCACCTTTTTTTTTTTCCTCTATTTTTCTCTCAGTTTTTTTTAATTTAAAATTCAGTAAATGACATCAAAATCAAATGGAGCAGCCACTTCCAAATCCGAATCGGAAACTGAGTGCTGCATGTGTGGAGATTTCGGCTTCTCCAACCAGCTTTTTCGCTGCAAAATCTGCCAATTCAGATCCCAACACAGATATTGTAGCAATTTGTACCCAAAATCCGATTCTTACCTAATTTGCAATTGGTGCCTAACTCAAAAGGACGAATCAACAAAACCCAAGTCGCCAAATTCTTCGCCCTCAATAAAAAAGACCAAAATTGTCAATATCGCCTCTCACAAAGATCAAATTCGCAGTTTTGAATCCCAAGAAAATAGACCCATAAAAAAACAGAGGCTGCCGGAACTTTGTGAACGTCCGCCGCCGCCGCCGCCTCCGGCACGGCGGAGGGCACTCGCCGACGAGGACAAAATCCGGCGGAGTAGATCGGAGGAGATTTCGCGGCGAAGTGGGATTCAGCGGCAGGGGATTTTTAGAAACAAGGTCAGAAGATACAAACTTCTGGACGAGGTTTCCACCTGAATTATTATTATTATTATTATTATTATTATGCCTTTTACCCAGAAATATGACAAAATAAATAACTCAATAAATGATAGGGGAAAATGCATTTTTACTCCCTAC ATGACATCAAAATCAAATGGAGCAGCCACTTCCAAATCCGAATCGGAAACTGAGTGCTGCATGTGTGGAGATTTCGGCTTCTCCAACCAGCTTTTTCGCTGCAAAATCTGCCAATTCAGATCCCAACACAGATATTGTAGCAATTTGTACCCAAAATCCGATTCTTACCTAATTTGCAATTGGTGCCTAACTCAAAAGGACGAATCAACAAAACCCAAGTCGCCAAATTCTTCGCCCTCAATAAAAAAGACCAAAATTGTCAATATCGCCTCTCACAAAGATCAAATTCGCAGTTTTGAATCCCAAGAAAATAGACCCATAAAAAAACAGAGGCTGCCGGAACTTTGTGAACGTCCGCCGCCGCCGCCGCCTCCGGCACGGCGGAGGGCACTCGCCGACGAGGACAAAATCCGGCGGAGTAGATCGGAGGAGATTTCGCGGCGAAGTGGGATTCAGCGGCAGGGGATTTTTAGAAACAAGGTCAGAAGATACAAACTTCTGGACGAGGTTTCCACCTGA MTSKSNGAATSKSESETECCMCGDFGFSNQLFRCKICQFRSQHRYCSNLYPKSDSYLICNWCLTQKDESTKPKSPNSSPSIKKTKIVNIASHKDQIRSFESQENRPIKKQRLPELCERPPPPPPPARRRALADEDKIRRSRSEEISRRSGIQRQGIFRNKVRRYKLLDEVST Homology
BLAST of Sed0013944 vs. NCBI nr
Match: XP_022951049.1 (uncharacterized protein LOC111454013 [Cucurbita moschata]) HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54 Identity = 121/174 (69.54%), Postives = 135/174 (77.59%), Query Frame = 0
BLAST of Sed0013944 vs. NCBI nr
Match: XP_022132041.1 (uncharacterized protein LOC111005007 [Momordica charantia]) HSP 1 Score: 223.0 bits (567), Expect = 2.0e-54 Identity = 123/185 (66.49%), Postives = 143/185 (77.30%), Query Frame = 0
BLAST of Sed0013944 vs. NCBI nr
Match: XP_023537720.1 (uncharacterized protein LOC111798664 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221.5 bits (563), Expect = 5.7e-54 Identity = 120/175 (68.57%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of Sed0013944 vs. NCBI nr
Match: XP_023002810.1 (uncharacterized protein LOC111496564 [Cucurbita maxima]) HSP 1 Score: 217.2 bits (552), Expect = 1.1e-52 Identity = 120/175 (68.57%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of Sed0013944 vs. NCBI nr
Match: XP_038884359.1 (uncharacterized protein LOC120075221 [Benincasa hispida]) HSP 1 Score: 202.6 bits (514), Expect = 2.7e-48 Identity = 115/172 (66.86%), Postives = 131/172 (76.16%), Query Frame = 0
BLAST of Sed0013944 vs. ExPASy TrEMBL
Match: A0A6J1GHL7 (uncharacterized protein LOC111454013 OS=Cucurbita moschata OX=3662 GN=LOC111454013 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 5.6e-55 Identity = 121/174 (69.54%), Postives = 135/174 (77.59%), Query Frame = 0
BLAST of Sed0013944 vs. ExPASy TrEMBL
Match: A0A6J1BR47 (uncharacterized protein LOC111005007 OS=Momordica charantia OX=3673 GN=LOC111005007 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 9.5e-55 Identity = 123/185 (66.49%), Postives = 143/185 (77.30%), Query Frame = 0
BLAST of Sed0013944 vs. ExPASy TrEMBL
Match: A0A6J1KQ08 (uncharacterized protein LOC111496564 OS=Cucurbita maxima OX=3661 GN=LOC111496564 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 5.2e-53 Identity = 120/175 (68.57%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of Sed0013944 vs. ExPASy TrEMBL
Match: A0A0A0LLR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369840 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 9.5e-47 Identity = 105/161 (65.22%), Postives = 123/161 (76.40%), Query Frame = 0
BLAST of Sed0013944 vs. ExPASy TrEMBL
Match: A0A1S3BCA2 (uncharacterized protein LOC103488103 OS=Cucumis melo OX=3656 GN=LOC103488103 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 3.6e-46 Identity = 104/162 (64.20%), Postives = 122/162 (75.31%), Query Frame = 0
BLAST of Sed0013944 vs. TAIR 10
Match: AT1G02070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60520.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 3.5e-09 Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 0
BLAST of Sed0013944 vs. TAIR 10
Match: AT3G60520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02070.1); Has 107 Blast hits to 107 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08 Identity = 38/112 (33.93%), Postives = 53/112 (47.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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