Sed0013940 (gene) Chayote v1

Overview


Name	Sed0013940
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG08: 30549640 .. 30550301 (-)
RNA-Seq Expression	Sed0013940
Synteny	Sed0013940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGGAAAAGACTACCTGGAAGTTTGGTGGGAGCTTTGTTAGCTTTAAAATGGAGCTTCATCTGAAAGTAGCGAAAGAAATGGAGGAGGATGATGAGGGAACAATGAAGGTCGAAAAGGGTTTAGGAAGGAGAGTAACACCTTTTGATCGTGGAAAGCAAACCACTAGCTTCCAAGAGAAGAACAAGAAGGAGGAGAAGGTTTGTTGGAGCACTTCTTCGCCGTCGTCGGACACCTTCGCCGGAGGCGAATTGGAAAAAAATGTCAATAGCTCTGTTGGGAGGAGATGGGTGACGCGACAGGTGTCAGACATGGAGCTGGGTTTCGTGAAGTTCAAGAGAAGAACAGCTGGGCTTGAGGAGACAGCTGTCCCACATGCACATTCTGATCGGCTTGAAGGTAAGAAATTGAATCGGGCCATATCCTTTGCTGGGTCTCCAGAACCGGTTGGGTTCGAAGCGGTTCAAATCGTGTTATTTGAATTGGTCCACAATTTAGACCGGATGGGTCATTTGGCTGAACCAAGTGGGGTTTTTGTTCGGGTTTTTTTCACTTCGCCGGGTTTTCTTGGTCATATGTTCATGTCTTCTTTGATTCAGTGTGTGGGTTTGGATGGAGTTTTGTTGTTGATGGATATTCTGGTGTGGTGGTTTTGTAA

mRNA sequence

ATGGGAAGGGAAAAGACTACCTGGAAGTTTGGTGGGAGCTTTGTTAGCTTTAAAATGGAGCTTCATCTGAAAGTAGCGAAAGAAATGGAGGAGGATGATGAGGGAACAATGAAGGTCGAAAAGGGTTTAGGAAGGAGAGTAACACCTTTTGATCGTGGAAAGCAAACCACTAGCTTCCAAGAGAAGAACAAGAAGGAGGAGAAGGTTTGTTGGAGCACTTCTTCGCCGTCGTCGGACACCTTCGCCGGAGGCGAATTGGAAAAAAATGTCAATAGCTCTGTTGGGAGGAGATGGGTGACGCGACAGGTGTCAGACATGGAGCTGGGTTTCGTGAAGTTCAAGAGAAGAACAGCTGGGCTTGAGGAGACAGCTGTCCCACATGCACATTCTGATCGGCTTGAAGGTAAGAAATTGAATCGGGCCATATCCTTTGCTGGGTCTCCAGAACCGGTTGGGTTCGAAGCGGTTCAAATCGTGTTATTTGAATTGGTCCACAATTTAGACCGGATGGGTCATTTGGCTGAACCAATGTGTGGGTTTGGATGGAGTTTTGTTGTTGATGGATATTCTGGTGTGGTGGTTTTGTAA

Coding sequence (CDS)

ATGGGAAGGGAAAAGACTACCTGGAAGTTTGGTGGGAGCTTTGTTAGCTTTAAAATGGAGCTTCATCTGAAAGTAGCGAAAGAAATGGAGGAGGATGATGAGGGAACAATGAAGGTCGAAAAGGGTTTAGGAAGGAGAGTAACACCTTTTGATCGTGGAAAGCAAACCACTAGCTTCCAAGAGAAGAACAAGAAGGAGGAGAAGGTTTGTTGGAGCACTTCTTCGCCGTCGTCGGACACCTTCGCCGGAGGCGAATTGGAAAAAAATGTCAATAGCTCTGTTGGGAGGAGATGGGTGACGCGACAGGTGTCAGACATGGAGCTGGGTTTCGTGAAGTTCAAGAGAAGAACAGCTGGGCTTGAGGAGACAGCTGTCCCACATGCACATTCTGATCGGCTTGAAGGTAAGAAATTGAATCGGGCCATATCCTTTGCTGGGTCTCCAGAACCGGTTGGGTTCGAAGCGGTTCAAATCGTGTTATTTGAATTGGTCCACAATTTAGACCGGATGGGTCATTTGGCTGAACCAATGTGTGGGTTTGGATGGAGTTTTGTTGTTGATGGATATTCTGGTGTGGTGGTTTTGTAA

Protein sequence

MGREKTTWKFGGSFVSFKMELHLKVAKEMEEDDEGTMKVEKGLGRRVTPFDRGKQTTSFQEKNKKEEKVCWSTSSPSSDTFAGGELEKNVNSSVGRRWVTRQVSDMELGFVKFKRRTAGLEETAVPHAHSDRLEGKKLNRAISFAGSPEPVGFEAVQIVLFELVHNLDRMGHLAEPMCGFGWSFVVDGYSGVVVL

Homology

The following BLAST results are available for this feature:

BLAST of Sed0013940 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0013940 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0013940 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0013940 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013940.1	Sed0013940.1	mRNA