Sed0013937 (gene) Chayote v1

Overview
NameSed0013937
Typegene
OrganismSechium edule (Chayote v1)
DescriptionDetected protein of confused Function
LocationLG02: 48404877 .. 48408639 (-)
RNA-Seq ExpressionSed0013937
SyntenySed0013937
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGTCCCGAGTTCAATTCTCGGAATGCCCCAAAATATTTTTTTCGCTTTTTTTTTTCTTGAACCCTAAAATGGAATTTTCGCAACTCTTCTAATCAAATTCGGGAGCTTGTTTCGATCATTGCAAAAATCCAGGATTGCAGATTTTGTTCATCCTTCTCTCTCTTTCCATTTCCATTTTTTTCTTCTGCAAATCGCGCCAAAAAGCACCAGGAAGAACCACAGAAGTCAGGTGATTATATATTTGGGATCCATTTTGGTTCATTTCAATCTTGTTTTTCCTGATTTTTGCATTTCAATGCGTTCATGGTGGTTTTGAATGTCTGCAGAAGCTTAGATTACATTGAAAGTGAGGGTTTCGTTTGTGGTTAGATCAAATCTTTAGCACCCATAATGCCGAAGGAATTGTGAGCCGAGATTCATGAGAAATTAGGATCGACCCGTTTGTCAATTTGAAGTGGGGTGATTGGGTGGTGTCTCAGTTCTTTATTCTTGTTTGTTGTTTGATATTAGTTATGATTTTTTAGAGGGTCAAGCTTGAATTGTATAGTCCCCAAAGGGTGGTTTCAGTGGTTGAAGATTCGAGCTTTGAGGGTATGCTTAAGATTTCAGGTTCGAGACTCACCTGTGGTATTACTCCTTCGATGTCTTCAGTGCCTCGTCTAGGGACAGGCGTAGTTAACCTTATTTAAATAAAAAAAACCCGAAAAACAACTTTTTTTTTGTGCCGCTATTCTCGCGGTAAGCTTCGAGGGTATGCTTAAGATTTCAGGTTCAAGACTCACCTGTGGTATTACTCCTTCGATGTCTCCAGTGCCTCGTCTAGGGACAGGCGTGGTTAACCTTGTTTAAATAAAAAAAACCCGAAAAACAACTCTTTTTTTTGTGCCGCTATTCTCACGAGACATACCGCCCTGTTCCTAGAATATTTGGATGTTAAGGAAATTTGTAGGAATCGATAGATTGAACCCACAACTTTTTAGTTTCTTGACATCCTTTTGACCTCTAGGCTACCTGGTGGTTTTTGTGTACCCACTTTTTCTAAGAAGCTTGGAAGCTTGTCAAGGATTTAGGGATAAAAACTCCTTTCAATTTTTTCTTTAATATACAATTTGATCTATATGTTGTTTTTTTTTTCATTTGATCCATGTTCTAATTATTTGGTAGTTTATGTTTGCAGCTGAACTAATCATTTTGATAAATAATAAGTGTGTAAAGGGTGGAAATGCCATCTCTACAGACTGCTCTACCTCCTGAGATTGCGAATAATGTCATTAGGGTTGGTTTCCTTTTATCCTTTTTAAATACAATTTCCATCCACGAATTTTGTTAACTTTTAATATTTTATCACTGCAGCTTTACCGCGAGTGCCTTCGAAGAGCCAAGTATATTGGTCATCAGGTCTGGTGTTATGATTCTAGTAATCTTATCTTGCATTGGAATGATTTAGAATGGCTAATCTGTCAACGTGAAGTGAAAAGTTGAAGTTCAATACAGTCTTAAAGCCTTTAACACACTTGGACACCCGTTGTTCTCTTACGTTCGTGTTAGGTTAATTGTTGTAACTATCTAATCAATGCGTTCTTTTTCTTATGTCTGTACTTTCTATTCAGTTCTTATATTACATCAGGCCTATTGAATTCATGCAGGACATAACCATGCGGCACAGTTATGTTCTTATATTCAATTATTCATATTAGTTAATCTTAGATCTCATCGTAGGAATTGTAGTACTTGAATAATTGGCTAACATAGTGTTTATTGTGTAAAAGCACCTTTTGCTGCTTGCCTCCGAGGATTATGTTTTTGCTTCAAAGGAAAATGTTTTTTTTAAGCAACAATTTCCTTGATGCATGAAATTATAATGCCATAGGACTATTACAAAATGCCACTCCAATTAGTAGTCTCTAAATAAAGAGTCGCGTTTAAACCAAGATGACAACCATATTGATTAGAGAATCAAAAAAGATTTTATAGGAAAAGTTGAGGTCCTTGAAAATGCATCTGTTTCTTTCTTGTCATATGCACCAAAAGAATCCTCTAATAAAGCCTTCCCAAAGAGCTTTGCCTTCTTCTTGAAAGGATGGCCTCCATGGCTTCATAGGAAAATGTTAACTGTAGAGTATGGTTATGAATGGTTAGGATGAAGGTGATACAACTATGATAAGGTTGGGCCTAGGGCTCTATTTAGCCATTACTTGGAGAATAAGTTAGTATTTTGTTATAAATAGAGTGAGTTAGGTTAGGGTTTAGGCATCCAATTATTGAGTGATTAATTGAGTGATTTATTGTAGGGCTCAAGAGATTCTCTTGAGAGGGGAGGTTCCAAGTTCCTATCAAAACTTGGCTTATCTTGTAATTTGTTATCTTTTGATATAATCTAGATCCTGGATCATATCAAACTATTGCTTGTGGAAGTGAAGTATGTCCATAGGATAGGTTGTTATGATTGATATACATTGATTGCGTACTCATCGATGGGCCGATGGCAATAAAGTTTCACGAAGTTGGTTCAACAAAAGACTACAGAAGTATGGTACTCTAAGAAGTTTATATTGTGTTTCTACATTTTGCTAACTTGTGAGGATTTATTACTCAGGAAATATGCATTACAAATTCACATTTCTTCACCTTATTTTATGCTCTAATGATTCTCTGTATTTTGGTAAGGATTATTCAACAACCATGATACTATCACAAATCTCATCAACAAATAGGTGCAAAATGAAAAACTCTATTCATTTCAGCCCATGCTTCAAACTTAGAAATGGTTGGAAAACTCATTGATGCATTCCACGTTGACTGTTATATTAGATTTCCTCTATCCTGGAGACTTGTATTGCTTCCTTTTTCTGAATTAAGTTATAATCTAAAAAATTGTGCTCGCATTTCAAATTAGTTGTATCCAATTATTGGGAGATGTAGAAGATTTAACATTGGGCCCTTGAAACTTGTTGACTTGAATCCTATAAACATTTTGCAGCAACATAACACCAGTCTTGTTGTTAGTATGGTGAGGCAACAATTCAGGAAGAACATGCACGAGACTGATCCGGAGAAGATTCAAAAGTTTAAAGATGATTATGTTTTACTATTGCTTCTACCAGAGTCTTAATTGGGATCTAAGAAATGATGAGTTTAATCGATGGTGATCACTTATCTAAGAATTAATGTTTTACGGGTTTCCTTGATATTCAAATGATGTAAGGTTAAGCGGTGTGTCCCTTGGAGAATAGTCGAGATGCGCGTAATCTGTCCCGACACTCACGGATATAAAAGTAGAACAAAGGCTGAAACTGATCAAAATTACATTTTGTTTTCTAATTAGAACTCTGTGAGCAAGGCACTCATATTTCGGTGTATATTGTTTTGTTTGCAGTGCGGCAAGGGGACTCATAAACCATATTCTACACGAAGCTGAGAGAATGTCGGGTCGAAAATTCAGCCAAAGTTCTTGATGCTATTGAGAATGACATCCAAGTAAAAGGTCTAATTTGAAACTTAGATAGGGTAGGAAAATAAAATGGCTGATGAAGAAATTACTCCTTGGAGGTTATCTTTGTTTTTCCTCTCATGTTTTTATCTTCAGCAATTGTCTTAAACTATCTCCTTTATGGGCTTTTCTTTTTCTTTCTGATCTTAGATATTACAAAACCTGAGGATGTTCAGGTAGTTGAGTTGAGACCTTAAATATTTTTTCCAACATTGATAATGAAATGTTGCACTTTGCATAG

mRNA sequence

CTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGTCCCGAGTTCAATTCTCGGAATGCCCCAAAATATTTTTTTCGCTTTTTTTTTTCTTGAACCCTAAAATGGAATTTTCGCAACTCTTCTAATCAAATTCGGGAGCTTGTTTCGATCATTGCAAAAATCCAGGATTGCAGATTTTGTTCATCCTTCTCTCTCTTTCCATTTCCATTTTTTTCTTCTGCAAATCGCGCCAAAAAGCACCAGGAAGAACCACAGAAGTCAGCTGAACTAATCATTTTGATAAATAATAAGTGTGTAAAGGGTGGAAATGCCATCTCTACAGACTGCTCTACCTCCTGAGATTGCGAATAATGTCATTAGGCTTTACCGCGAGTGCCTTCGAAGAGCCAAGTATATTGGTCATCAGCAACATAACACCAGTCTTGTTGTTAGTATGGTGAGGCAACAATTCAGGAAGAACATGCACGAGACTGATCCGGAGAAGATTCAAAAGTTTAAAGATGATTATGTTTTACTATTGCTTCTACCAGAGTCTTAATTGGGATCTAAGAAATGATGAGTTTAATCGATGTGCGGCAAGGGGACTCATAAACCATATTCTACACGAAGCTGAGAGAATGTCGGGTCGAAAATTCAGCCAAAGTTCTTGATGCTATTGAGAATGACATCCAAGTAAAAGGTCTAATTTGAAACTTAGATAGGGTAGGAAAATAAAATGGCTGATGAAGAAATTACTCCTTGGAGGTTATCTTTGTTTTTCCTCTCATGTTTTTATCTTCAGCAATTGTCTTAAACTATCTCCTTTATGGGCTTTTCTTTTTCTTTCTGATCTTAGATATTACAAAACCTGAGGATGTTCAGGTAGTTGAGTTGAGACCTTAAATATTTTTTCCAACATTGATAATGAAATGTTGCACTTTGCATAG

Coding sequence (CDS)

ATGCCATCTCTACAGACTGCTCTACCTCCTGAGATTGCGAATAATGTCATTAGGCTTTACCGCGAGTGCCTTCGAAGAGCCAAGTATATTGGTCATCAGCAACATAACACCAGTCTTGTTGTTAGTATGGTGAGGCAACAATTCAGGAAGAACATGCACGAGACTGATCCGGAGAAGATTCAAAAGTTTAAAGATGATTATGTTTTACTATTGCTTCTACCAGAGTCTTAA

Protein sequence

MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKIQKFKDDYVLLLLLPES
Homology
[Close]
BLAST of Sed0013937 vs. NCBI nr
Match: XP_022138283.1 (uncharacterized protein LOC111009499 [Momordica charantia] >XP_022138284.1 uncharacterized protein LOC111009499 [Momordica charantia])

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYRECLRRAKYIGHQQHNT LVVSMVRQQFRKNMHETDPEKI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTELVVSMVRQQFRKNMHETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. NCBI nr
Match: XP_022972196.1 (uncharacterized protein LOC111470803 [Cucurbita maxima] >XP_023540322.1 uncharacterized protein LOC111800735 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYRECLRRAKYIGH+QHNT LVVSMV+QQFRKNMHETDPEKI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECLRRAKYIGHRQHNTDLVVSMVKQQFRKNMHETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. NCBI nr
Match: XP_022964695.1 (uncharacterized protein LOC111464671 [Cucurbita moschata])

HSP 1 Score: 127.9 bits (320), Expect = 3.8e-26
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYRECLRRAK+IGH+QHNT LVVSMV+QQFRKNMHETDPEKI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. NCBI nr
Match: XP_038878962.1 (uncharacterized protein LOC120071039 [Benincasa hispida] >XP_038878971.1 uncharacterized protein LOC120071039 [Benincasa hispida])

HSP 1 Score: 127.9 bits (320), Expect = 3.8e-26
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYRECLRRAKYIGHQQHNT L+VSMVRQQFRKNM ETDPEKI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTELLVSMVRQQFRKNMRETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. NCBI nr
Match: XP_024196868.1 (uncharacterized protein LOC112200085 [Rosa chinensis] >XP_024196869.1 uncharacterized protein LOC112200085 [Rosa chinensis] >PRQ39558.1 putative complex 1 LYR protein [Rosa chinensis])

HSP 1 Score: 127.9 bits (320), Expect = 3.8e-26
Identity = 58/66 (87.88%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYREC+RRAKY+GH+QHNT LVV MVRQQF+KNMHETDP+KI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECIRRAKYVGHRQHNTQLVVDMVRQQFKKNMHETDPDKI 60

Query: 61 QKFKDD 67
          QKFKDD
Sbjct: 61 QKFKDD 66

[Close]
BLAST of Sed0013937 vs. ExPASy TrEMBL
Match: A0A6J1C9Q7 (uncharacterized protein LOC111009499 OS=Momordica charantia OX=3673 GN=LOC111009499 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.7e-28
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYRECLRRAKYIGHQQHNT LVVSMVRQQFRKNMHETDPEKI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTELVVSMVRQQFRKNMHETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. ExPASy TrEMBL
Match: A0A6J1I5B4 (uncharacterized protein LOC111470803 OS=Cucurbita maxima OX=3661 GN=LOC111470803 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.3e-27
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYRECLRRAKYIGH+QHNT LVVSMV+QQFRKNMHETDPEKI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECLRRAKYIGHRQHNTDLVVSMVKQQFRKNMHETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. ExPASy TrEMBL
Match: A0A2P6QZE1 (Putative complex 1 LYR protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0426541 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-26
Identity = 58/66 (87.88%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYREC+RRAKY+GH+QHNT LVV MVRQQF+KNMHETDP+KI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECIRRAKYVGHRQHNTQLVVDMVRQQFKKNMHETDPDKI 60

Query: 61 QKFKDD 67
          QKFKDD
Sbjct: 61 QKFKDD 66

[Close]
BLAST of Sed0013937 vs. ExPASy TrEMBL
Match: A0A6J1HLJ6 (uncharacterized protein LOC111464671 OS=Cucurbita moschata OX=3662 GN=LOC111464671 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-26
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANNVIRLYRECLRRAK+IGH+QHNT LVVSMV+QQFRKNMHETDPEKI
Sbjct: 1  MPSLQTALPPELANNVIRLYRECLRRAKFIGHRQHNTDLVVSMVKQQFRKNMHETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. ExPASy TrEMBL
Match: A0A251TU50 (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0252081 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 60/66 (90.91%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQTALPPE+ANN IRLYRECLRRAKYIGH+QHNT LVV MVRQQFRKNMHETDPEKI
Sbjct: 1  MPSLQTALPPELANNAIRLYRECLRRAKYIGHKQHNTELVVQMVRQQFRKNMHETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. TAIR 10
Match: AT3G17300.1 (unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 118.2 bits (295), Expect = 2.8e-27
Identity = 55/66 (83.33%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 1  MPSLQTALPPEIANNVIRLYRECLRRAKYIGHQQHNTSLVVSMVRQQFRKNMHETDPEKI 60
          MPSLQT+LPPE+ANNV+RLYRECLRRAK+IG QQHNT LVV MVRQQF+K+M+ETDPEKI
Sbjct: 1  MPSLQTSLPPELANNVVRLYRECLRRAKFIGKQQHNTELVVGMVRQQFKKHMNETDPEKI 60

Query: 61 QKFKDD 67
          QK KDD
Sbjct: 61 QKLKDD 66

[Close]
BLAST of Sed0013937 vs. TAIR 10
Match: AT3G17300.2 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-09
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 34 QHNTSLVVSMVRQQFRKNMHETDPEKIQKFKDD 67
          QHNT LVV MVRQQF+K+M+ETDPEKIQK KDD
Sbjct: 17 QHNTELVVGMVRQQFKKHMNETDPEKIQKLKDD 49

The following BLAST results are available for this feature:
BLAST of Sed0013937 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022138283.12.0e-2795.45uncharacterized protein LOC111009499 [Momordica charantia] >XP_022138284.1 uncha... [more]
XP_022972196.11.3e-2692.42uncharacterized protein LOC111470803 [Cucurbita maxima] >XP_023540322.1 uncharac... [more]
XP_022964695.13.8e-2690.91uncharacterized protein LOC111464671 [Cucurbita moschata][more]
XP_038878962.13.8e-2692.42uncharacterized protein LOC120071039 [Benincasa hispida] >XP_038878971.1 unchara... [more]
XP_024196868.13.8e-2687.88uncharacterized protein LOC112200085 [Rosa chinensis] >XP_024196869.1 uncharacte... [more]
BLAST of Sed0013937 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0013937 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C9Q79.7e-2895.45uncharacterized protein LOC111009499 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6J1I5B46.3e-2792.42uncharacterized protein LOC111470803 OS=Cucurbita maxima OX=3661 GN=LOC111470803... [more]
A0A2P6QZE11.8e-2687.88Putative complex 1 LYR protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g04265... [more]
A0A6J1HLJ61.8e-2690.91uncharacterized protein LOC111464671 OS=Cucurbita moschata OX=3662 GN=LOC1114646... [more]
A0A251TU502.4e-2690.91Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0252081 PE... [more]
BLAST of Sed0013937 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G17300.12.8e-2783.33unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bac... [more]
AT3G17300.22.0e-0981.82unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth ... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 16..63
e-value: 5.5E-12
score: 45.6
NoneNo IPR availablePANTHERPTHR47579COMPLEX 1 LYR PROTEINcoord: 1..66
NoneNo IPR availableCDDcd20251Complex1_LYR_SFcoord: 16..66
e-value: 1.2119E-15
score: 62.1774

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0013937.1Sed0013937.1mRNA
Sed0013937.2Sed0013937.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane