Sed0013886 (gene) Chayote v1

Overview


Name	Sed0013886
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like
Location	LG05: 40179711 .. 40181952 (+)
RNA-Seq Expression	Sed0013886
Synteny	Sed0013886

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAACTCCTCAACAATCCCAAGACAGTGTTCTTTCTTTCAATCCCCAAGATGAAAAAATTAGACTTCTTTTGCAAATCCAGAGCTTCCACGGCCGTTCGTTCAAGTTTCGGCCGCCCTCCGGTGGCCGGAGATACCAATTCCGGCGATCGGAGAAAAGGGTTTACTCATTTCGAGAAGCACAGAAAGAGTACAAGCTGTTCCTCGGTAAATCGAAAGGATCATATCGATTTACGAAGAAAAAGCTGCGCTGATGTTGACGATTTGAAGAGCTCTGTTTCTGGCTCCTCTGGTCGGTATCTGTTGGGCGATTCGCCGTTCATTGACTGGCTTCCGACGGCCGACGGCGAGGATTTTCAGGCGCCGGCGCCGGAGGAGAGGAAGGCGATGAATCTTGGTTCTAAGAAAGTTTCTTCGTTGAAACGTTCGTTGACTGTTCATGAATATCGTCGTAGCCTGAAATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTTGAAGACTTCTTCTTTAGCTCATTCTCGTCATCAGGTTTTCTTTTCAACACTTGTTTTTCCTTTTATTCTCTCTTTTATGTTTATTAAAATAAAAGATTTATTTGAAAGAATTGAATTTTTTTAATTTTCTCTCTAATTAGTCTTTTAAAATTTTGCTGAAATTGATATAATTAATCTTATTTTTCTTTTTTTTTTTTTCTCTCTTTTTCTCTTGAATTTTATTTTTCTCATCCACTCTTTTTAAGTATGTTATTAAAGTATATAAAACTCAAATAGATATATATTTAAAAAATTATTATTTTGATTATCTTCATTAATGATAATCTATTTCAATTTTACGATCATAAATTAGATATGGAAAATTGATATTTAATTATCATATTATTTGAGAATAATAGTCATTTATTTGTAGGATTTATTAGTCCGCTCTCTCACTTTATACTAAAAATTCATGTTAAAATGATGAATTGATGATTTTTTTTTTTGAGAAGGTGAAATAACTCAACACTAACAATATGCATGAGCTACTCATGTTCAAGTCAATTAATTTTGAAATGTACCACATAATATATACTTCTACACAACCTCCAAGTGATGAAATGTTTGCAACATTGATACAATTATATTCATTTACTCAAAAGTTTTTTGGTTGATGAATTTAAGAAGGATAATAAGTTTGTTAAAATATAAATAGAAAGTGGAGATTGTAAAGTTTTCTCACCAAGGATTGTGTTAGAATTCAAAAGGGATGACCTTTTTGCTGTTGATGTTCTTTTGTTGCTCCTTAATTTTCATTTTTGAAAAGGTGGTGGTTCTGAAAGTTTCACTGAACTGCAAAGGCTGTGAAAATAAGGTGAAAAAGCATATCTCCAAGATGGAAGGTAATGCAATAAATTTCTTCTTCTTTATTTTTAGTGAAAATTAGGGAAATTGCATAAACCACCTTTAAAGTTTGTGATGGATAATATTTATACATTTAAACTTTCAATTCAATCAATTACATCCTCTAAAATTTAATAAATGTTATGACCAATCATTTTAATTAAAATTTGGGTATTGCATAAAAGGTTAAAATTATCATATAAAAATCTCTTTATTTTGGTGAAAGAAAACCCGTAAAAGAAATCGATTTCGAAACTGAGAAGAAAAACTTTTTTAGATATGATAATTTTAACATTTTTCGACACTTAAATTTAATTAAAATGGTTGATTGCAACCCAAATCAAACTTTAAAAAGCTATAAGTGATCAAATTAAAACCAGATGTGATTTGCAGCAATTTTTTCTAAAAATTATGAATTTAAGAAGAGAAGTTTGAAAAACAGTATTGATGATGATGATGCAGGGGTGACATCATATAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGAGATGTGAACCCTTTTGATGTGTTGGCCAGTGTCTCTAAAGTGAAGCATGCTCAGCTCTGGCCTTCACCACATGTTTCTTCTTCATCGTCTTCTTCCTCTTCGTCGCCGACAACTTTCTGATCAATTTTGCCATAAAAATGTCATCTGGAGTTTGTTTTTAAGCTTTTGTTTTTTCCATTTTGGTGATGAAGTTTCAAGTTGTATTACTACGTTTGCATTTTGCCTGCTTAGTTGGCTGTTTATGGGTTAAATATTTCTTTGCCCAAATTTAAGGTCGAGGGAAGATGCTATTCAATAATGCCCACTTAATGTAACTATGCAGGAATTGAAATATAGTTTTTTTTAGGTCTA

mRNA sequence

ATTGAACTCCTCAACAATCCCAAGACAGTGTTCTTTCTTTCAATCCCCAAGATGAAAAAATTAGACTTCTTTTGCAAATCCAGAGCTTCCACGGCCGTTCGTTCAAGTTTCGGCCGCCCTCCGGTGGCCGGAGATACCAATTCCGGCGATCGGAGAAAAGGGTTTACTCATTTCGAGAAGCACAGAAAGAGTACAAGCTGTTCCTCGGTAAATCGAAAGGATCATATCGATTTACGAAGAAAAAGCTGCGCTGATGTTGACGATTTGAAGAGCTCTGTTTCTGGCTCCTCTGGTCGGTATCTGTTGGGCGATTCGCCGTTCATTGACTGGCTTCCGACGGCCGACGGCGAGGATTTTCAGGCGCCGGCGCCGGAGGAGAGGAAGGCGATGAATCTTGGTTCTAAGAAAGTTTCTTCGTTGAAACGTTCGTTGACTGTTCATGAATATCGTCGTAGCCTGAAATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTTGAAGACTTCTTCTTTAGCTCATTCTCGTCATCAGGTGGTGGTTCTGAAAGTTTCACTGAACTGCAAAGGCTGTGAAAATAAGGTGAAAAAGCATATCTCCAAGATGGAAGGGGTGACATCATATAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGAGATGTGAACCCTTTTGATGTGTTGGCCAGTGTCTCTAAAGTGAAGCATGCTCAGCTCTGGCCTTCACCACATGTTTCTTCTTCATCGTCTTCTTCCTCTTCGTCGCCGACAACTTTCTGATCAATTTTGCCATAAAAATGTCATCTGGAGTTTGTTTTTAAGCTTTTGTTTTTTCCATTTTGGTGATGAAGTTTCAAGTTGTATTACTACGTTTGCATTTTGCCTGCTTAGTTGGCTGTTTATGGGTTAAATATTTCTTTGCCCAAATTTAAGGTCGAGGGAAGATGCTATTCAATAATGCCCACTTAATGTAACTATGCAGGAATTGAAATATAGTTTTTTTTAGGTCTA

Coding sequence (CDS)

ATGAAAAAATTAGACTTCTTTTGCAAATCCAGAGCTTCCACGGCCGTTCGTTCAAGTTTCGGCCGCCCTCCGGTGGCCGGAGATACCAATTCCGGCGATCGGAGAAAAGGGTTTACTCATTTCGAGAAGCACAGAAAGAGTACAAGCTGTTCCTCGGTAAATCGAAAGGATCATATCGATTTACGAAGAAAAAGCTGCGCTGATGTTGACGATTTGAAGAGCTCTGTTTCTGGCTCCTCTGGTCGGTATCTGTTGGGCGATTCGCCGTTCATTGACTGGCTTCCGACGGCCGACGGCGAGGATTTTCAGGCGCCGGCGCCGGAGGAGAGGAAGGCGATGAATCTTGGTTCTAAGAAAGTTTCTTCGTTGAAACGTTCGTTGACTGTTCATGAATATCGTCGTAGCCTGAAATCTCCTTCCTCTGTTCTTGAATCCCCTGTTTTGAAGACTTCTTCTTTAGCTCATTCTCGTCATCAGGTGGTGGTTCTGAAAGTTTCACTGAACTGCAAAGGCTGTGAAAATAAGGTGAAAAAGCATATCTCCAAGATGGAAGGGGTGACATCATATAGTGTGGATTTCACAACAAAAAAAGTGACCATAATTGGAGATGTGAACCCTTTTGATGTGTTGGCCAGTGTCTCTAAAGTGAAGCATGCTCAGCTCTGGCCTTCACCACATGTTTCTTCTTCATCGTCTTCTTCCTCTTCGTCGCCGACAACTTTCTGA

Protein sequence

MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHIDLRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKVSSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSSSSSSSPTTF

Homology

[Close]

BLAST of Sed0013886 vs. NCBI nr
Match: XP_038901867.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Benincasa hispida])

HSP 1 Score: 362.1 bits (928), Expect = 3.8e-96
Identity = 197/245 (80.41%), Postives = 209/245 (85.31%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MKKLD FCKSRASTAVRSSFGR PVAGD +SGDRRKG  HFE HRKSTSCS+VNRK+  D
Sbjct: 1   MKKLDLFCKSRASTAVRSSFGRRPVAGDAHSGDRRKGQLHFENHRKSTSCSTVNRKELND 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
           LRRKSCADVDDLKS VSGSS RYLLGDSPF+DW P   GEDF AP PE+RK ++  S+K 
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEDFPAPMPEKRKIISNSSEKS 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHI 180
            SL RSLTVHEY R LKSPSSVLESPVLKTSSL HSR QVVVLKVSLNCKGCE KVKKHI
Sbjct: 121 CSLSRSLTVHEY-RGLKSPSSVLESPVLKTSSLTHSRDQVVVLKVSLNCKGCEKKVKKHI 180

Query: 181 SKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSS----SSSSSS 240
           SKMEGVTSYSVDFTTKKVTIIGD+ PFDVLASVSKVK+AQ W SP+ SSS    SSSSSS
Sbjct: 181 SKMEGVTSYSVDFTTKKVTIIGDLTPFDVLASVSKVKYAQFWQSPNSSSSSTPQSSSSSS 240

Query: 241 SPTTF 242
           S +TF
Sbjct: 241 SSSTF 244

[Close]

BLAST of Sed0013886 vs. NCBI nr
Match: XP_004148220.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Cucumis sativus] >KGN47352.1 hypothetical protein Csa_023044 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 1.1e-87
Identity = 183/242 (75.62%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MKKLD FCKSRASTAVRSSF R P+ GD +SGDRRKG  HFE HRKSTSCS++NRK+  D
Sbjct: 1   MKKLDIFCKSRASTAVRSSFARRPLTGDAHSGDRRKGQLHFENHRKSTSCSTLNRKELND 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
           LRRKSCADVDDLKS VSGSS RYLLGDSPF+DW P   GE+  A  PE+RK ++  S+K 
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPALMPEKRKIISDNSQKS 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHI 180
             L RSLTV EY   LKSPSSVLESPVLKT SL  SR QVVVLKVSLNC+GCE KVKKHI
Sbjct: 121 FLLNRSLTVREY-GGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 180

Query: 181 SKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSS-SSSSSPT 240
           SKMEGVTSYSVDFTTKKVTIIGD+ PFDVLASVSKVK AQ WPSP+ SSSS+  SSSS +
Sbjct: 181 SKMEGVTSYSVDFTTKKVTIIGDITPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSS 240

Query: 241 TF 242
           TF
Sbjct: 241 TF 241

[Close]

BLAST of Sed0013886 vs. NCBI nr
Match: KAG6570732.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.2 bits (840), Expect = 6.1e-86
Identity = 186/237 (78.48%), Postives = 194/237 (81.86%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MKKLDFFCKSRASTAVRSSFGR PV GD NSGDRRK    FE HRKSTSCSSVNRKDH D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
           LRRKSCADVDDLKSSVSGSS RYLL DS FIDWLP   GEDF A  P+ER  ++      
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPKERNMIS-----H 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHI 180
           SSL RSLTVHEY R  KSPSSVL+SPVLKT+S A    QVVVLKVSLNCKGCE KVKKHI
Sbjct: 121 SSLTRSLTVHEY-RGQKSPSSVLQSPVLKTASSA-VHDQVVVLKVSLNCKGCEKKVKKHI 180

Query: 181 SKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSSSSSSS 238
           SKMEGV+SYSVDFT KKVTIIG V+PFDVLASVSKVK+AQ W SP  SS SSSSSSS
Sbjct: 181 SKMEGVSSYSVDFTAKKVTIIGAVSPFDVLASVSKVKYAQFWTSPSSSSCSSSSSSS 230

[Close]

BLAST of Sed0013886 vs. NCBI nr
Match: XP_022986932.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like [Cucurbita maxima])

HSP 1 Score: 327.8 bits (839), Expect = 7.9e-86
Identity = 186/237 (78.48%), Postives = 193/237 (81.43%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MKKLDFFCKSRASTAVRSSFGR PV GD NSGDRRK    FE HRKSTSCSSVNRKDH D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
           LRRKSCADVDDLKSSVSGSS RYLL DS FIDWLP   GEDF A  P ER  ++      
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMIS-----H 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHI 180
           SSL RSLTVHEY R  KSPSSVL+SPVLKT+S A    QVVVLKVSLNCKGCE KVKKHI
Sbjct: 121 SSLTRSLTVHEY-RGQKSPSSVLQSPVLKTASSA-VHDQVVVLKVSLNCKGCEKKVKKHI 180

Query: 181 SKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSSSSSSS 238
           SKMEGV+SYSVDFT KKVTIIG V+PFDVLASVSKVK+AQ W SP  SS SSSSSSS
Sbjct: 181 SKMEGVSSYSVDFTAKKVTIIGAVSPFDVLASVSKVKYAQFWTSPSSSSCSSSSSSS 230

[Close]

BLAST of Sed0013886 vs. NCBI nr
Match: XP_022148318.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 327.8 bits (839), Expect = 7.9e-86
Identity = 185/240 (77.08%), Postives = 193/240 (80.42%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MK LD FCKSRASTAV SS  R PVA    SG+RRKG  HFEKHRKSTSCSS NRKD  +
Sbjct: 1   MKTLDLFCKSRASTAVCSSLDRRPVAARGYSGNRRKGQLHFEKHRKSTSCSSANRKDDFN 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
            RRKSCADVDDLKS  SGSS RYLLGDSPFIDW P A GEDF A  PEER      ++K 
Sbjct: 61  FRRKSCADVDDLKSPASGSSARYLLGDSPFIDWFPAASGEDFPANPPEER------TQKS 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVL--ESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKK 180
           SSL RSLT HEY R LKSPSSVL  ESPVLK+ S A SRHQVVVLKVSLNCKGCE KVKK
Sbjct: 121 SSLTRSLTAHEY-RGLKSPSSVLSHESPVLKSPSSAQSRHQVVVLKVSLNCKGCEKKVKK 180

Query: 181 HISKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSSSSSSSP 239
           HISKMEGVTSYSVDFTTKKVTIIG+V PF VL SVSKVKHAQLWPSP  S+SSSSSSS+P
Sbjct: 181 HISKMEGVTSYSVDFTTKKVTIIGEVTPFGVLESVSKVKHAQLWPSPTSSTSSSSSSSTP 233

[Close]

BLAST of Sed0013886 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.1e-21
Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 139 PSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKV 198
           P S   SP  K S    S  QVVVL+VSL+CKGC  KVKKH+SK++GVTSY++DF  KKV
Sbjct: 234 PQSSPPSPPEKNS----SSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKV 293

Query: 199 TIIGDVNPFDVLASVSKVKHAQLWP 224
           T+ GDV P  VLAS+SKVK+AQ WP
Sbjct: 294 TVTGDVTPLTVLASISKVKNAQFWP 314

[Close]

BLAST of Sed0013886 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-20
Identity = 92/266 (34.59%), Postives = 124/266 (46.62%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAV----------------------RSSFGRPPVAGD---------- 60
           MK   F+C S+ASTA                       R SF  P  +GD          
Sbjct: 1   MKAGMFYCASQASTATANGERTVTARAIDRHNPIIKDGRRSFTAPCSSGDDYVAPYRQLS 60

Query: 61  ------TNSGDRRKGFTHFEKHRKSTSCSSVNRKDH-IDLRRKSCADVDDLKSSVSGSSG 120
                 ++SGD +      +K R+S S S +    + + L RKS   V     +  GS+ 
Sbjct: 61  KITRVPSSSGDGKS--VQVDKGRRSNSGSLMKLISYDVSLARKSFGCVVATPKTPPGST- 120

Query: 121 RYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKVSSLKRSLTVHEYRRSLKSPSS 180
           RYLLG  P    L  + G+D  A    E  A   GS        S  V E ++S  S S 
Sbjct: 121 RYLLGSDPVS--LAGSTGQDTVATEESEASAPKRGS--------SGPVEEKKKSSGSGSD 180

Query: 181 VLESPVLKTSSLAHSRHQVVVLKVSL--NCKGCENKVKKHISKMEGVTSYSVDFTTKKVT 226
                            QVVVL+VSL  +C+GC+ KVKKH+SKM+GVTS+++DF +KKVT
Sbjct: 181 -----------------QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVT 236

[Close]

BLAST of Sed0013886 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-19
Identity = 42/79 (53.16%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 149 KTSSLAHSRHQVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKVTIIGDVNPFD 208
           K ++   +  QVVVLKVSL+C+GCE KV+KH+++M+GVTS+++DF  KKVT+ GD+ P +
Sbjct: 171 KKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLE 230

Query: 209 VLASVSKVKHAQLWPSPHV 228
           +L S+SKVK+AQ W +P +
Sbjct: 231 ILDSISKVKNAQFWTNPTI 249

[Close]

BLAST of Sed0013886 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09
Identity = 29/69 (42.03%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 157 RHQVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKV 216
           R+   VL+VS++C+GC+ K+KK +SK++GV + ++D   +KVT+IG+V P  ++  + K 
Sbjct: 28  RYTTWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKA 87

Query: 217 -KHAQLWPS 225
            +HA+LWP+
Sbjct: 88  GRHAELWPT 96

[Close]

BLAST of Sed0013886 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.3e-08
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 159 QVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKV-K 218
           Q VVLKV ++C+GC   V + + KMEGV S+ +D   +KVT+ G+V P  V  +VSK  K
Sbjct: 3   QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62

Query: 219 HAQLWP 224
               WP
Sbjct: 63  KTSYWP 68

[Close]

BLAST of Sed0013886 vs. ExPASy TrEMBL
Match: A0A0A0KG24 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G302690 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 5.4e-88
Identity = 183/242 (75.62%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MKKLD FCKSRASTAVRSSF R P+ GD +SGDRRKG  HFE HRKSTSCS++NRK+  D
Sbjct: 1   MKKLDIFCKSRASTAVRSSFARRPLTGDAHSGDRRKGQLHFENHRKSTSCSTLNRKELND 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
           LRRKSCADVDDLKS VSGSS RYLLGDSPF+DW P   GE+  A  PE+RK ++  S+K 
Sbjct: 61  LRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPAVSGEEVPALMPEKRKIISDNSQKS 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHI 180
             L RSLTV EY   LKSPSSVLESPVLKT SL  SR QVVVLKVSLNC+GCE KVKKHI
Sbjct: 121 FLLNRSLTVREY-GGLKSPSSVLESPVLKTPSLTQSRDQVVVLKVSLNCRGCEKKVKKHI 180

Query: 181 SKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSS-SSSSSPT 240
           SKMEGVTSYSVDFTTKKVTIIGD+ PFDVLASVSKVK AQ WPSP+ SSSS+  SSSS +
Sbjct: 181 SKMEGVTSYSVDFTTKKVTIIGDITPFDVLASVSKVKSAQFWPSPNSSSSSTPQSSSSSS 240

Query: 241 TF 242
           TF
Sbjct: 241 TF 241

[Close]

BLAST of Sed0013886 vs. ExPASy TrEMBL
Match: A0A6J1J8X9 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111484523 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.8e-86
Identity = 186/237 (78.48%), Postives = 193/237 (81.43%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MKKLDFFCKSRASTAVRSSFGR PV GD NSGDRRK    FE HRKSTSCSSVNRKDH D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDANSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
           LRRKSCADVDDLKSSVSGSS RYLL DS FIDWLP   GEDF A  P ER  ++      
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMIS-----H 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHI 180
           SSL RSLTVHEY R  KSPSSVL+SPVLKT+S A    QVVVLKVSLNCKGCE KVKKHI
Sbjct: 121 SSLTRSLTVHEY-RGQKSPSSVLQSPVLKTASSA-VHDQVVVLKVSLNCKGCEKKVKKHI 180

Query: 181 SKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSSSSSSS 238
           SKMEGV+SYSVDFT KKVTIIG V+PFDVLASVSKVK+AQ W SP  SS SSSSSSS
Sbjct: 181 SKMEGVSSYSVDFTAKKVTIIGAVSPFDVLASVSKVKYAQFWTSPSSSSCSSSSSSS 230

[Close]

BLAST of Sed0013886 vs. ExPASy TrEMBL
Match: A0A6J1D3S6 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017000 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.8e-86
Identity = 185/240 (77.08%), Postives = 193/240 (80.42%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MK LD FCKSRASTAV SS  R PVA    SG+RRKG  HFEKHRKSTSCSS NRKD  +
Sbjct: 1   MKTLDLFCKSRASTAVCSSLDRRPVAARGYSGNRRKGQLHFEKHRKSTSCSSANRKDDFN 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
            RRKSCADVDDLKS  SGSS RYLLGDSPFIDW P A GEDF A  PEER      ++K 
Sbjct: 61  FRRKSCADVDDLKSPASGSSARYLLGDSPFIDWFPAASGEDFPANPPEER------TQKS 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVL--ESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKK 180
           SSL RSLT HEY R LKSPSSVL  ESPVLK+ S A SRHQVVVLKVSLNCKGCE KVKK
Sbjct: 121 SSLTRSLTAHEY-RGLKSPSSVLSHESPVLKSPSSAQSRHQVVVLKVSLNCKGCEKKVKK 180

Query: 181 HISKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSSSSSSSP 239
           HISKMEGVTSYSVDFTTKKVTIIG+V PF VL SVSKVKHAQLWPSP  S+SSSSSSS+P
Sbjct: 181 HISKMEGVTSYSVDFTTKKVTIIGEVTPFGVLESVSKVKHAQLWPSPTSSTSSSSSSSTP 233

[Close]

BLAST of Sed0013886 vs. ExPASy TrEMBL
Match: A0A6J1FTK0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448670 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.2e-85
Identity = 186/239 (77.82%), Postives = 193/239 (80.75%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MKKLDFFCKSRASTAVRSSFGR PV GD NSGDRRK    FE HRKSTSCSSVNRKDH D
Sbjct: 1   MKKLDFFCKSRASTAVRSSFGRRPVDGDENSGDRRKWQLPFENHRKSTSCSSVNRKDHYD 60

Query: 61  LRRKSCADVDDLKSSVSGSSGRYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKV 120
           LRRKSCADVDDLKSSVSGSS RYLL DS FIDWLP   GEDF A  P ER  ++      
Sbjct: 61  LRRKSCADVDDLKSSVSGSSARYLLSDSSFIDWLPAVSGEDFPAKPPNERNMIS-----H 120

Query: 121 SSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHI 180
           SSL RSLTVHEY R  KSPSSVL+SPVLKT+S A    QVVVLKVSLNCKGCE KVKKHI
Sbjct: 121 SSLTRSLTVHEY-RGQKSPSSVLQSPVLKTASSA-VHDQVVVLKVSLNCKGCEKKVKKHI 180

Query: 181 SKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSSSSSSSPT 240
           SKMEGV+SYSVDFT KKVTIIG V+PFDVLASVSKVK+AQ W S   SS SSSSSSS T
Sbjct: 181 SKMEGVSSYSVDFTAKKVTIIGAVSPFDVLASVSKVKYAQFWTSLSSSSCSSSSSSSST 232

[Close]

BLAST of Sed0013886 vs. ExPASy TrEMBL
Match: A0A6J1G708 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111451357 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.8e-83
Identity = 191/247 (77.33%), Postives = 199/247 (80.57%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTNSGDRRKGFTHFEKHRKSTSCSSVNRKDHID 60
           MK+ D FCKSRASTAVRSSFG   VAGD NSGD RKG  HFEK RKSTS SSVNRKDHID
Sbjct: 1   MKRFDLFCKSRASTAVRSSFGCRRVAGDVNSGDGRKGQLHFEKPRKSTSVSSVNRKDHID 60

Query: 61  LRRKSCADVDDLK-SSVSGSSGRYLLGDSPFIDWLPTADGEDF-QAPAPEERKAMNLGSK 120
           LRRKSCAD+DDLK SSVSGSS RYLLGDSPFI+WLP    EDF QAPA      M+ GSK
Sbjct: 61  LRRKSCADMDDLKNSSVSGSSSRYLLGDSPFINWLPATAVEDFSQAPA-----MMSHGSK 120

Query: 121 KVSSLKRSLTVHEYRRSLKSPSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKK 180
           K SSL RSL+VHE      SPSSVLESPVLKTSS AHSR  VVVLKVSLNCKGCE KVK+
Sbjct: 121 KASSLSRSLSVHE------SPSSVLESPVLKTSSSAHSR--VVVLKVSLNCKGCEKKVKR 180

Query: 181 HISKMEGVTSYSVDFTTKKVTIIGDVNPFDVLASVSKVKHAQLWPSPHVSSSSSSS---- 240
           HISKMEGV S+SVDFTTKKVTIIGDV P DVLASVSKVKHA+LWPSP  SSSSSSS    
Sbjct: 181 HISKMEGVISFSVDFTTKKVTIIGDVIPVDVLASVSKVKHAELWPSPSFSSSSSSSTPQC 234

[Close]

BLAST of Sed0013886 vs. TAIR 10
Match: AT2G28660.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 122.9 bits (307), Expect = 3.6e-28
Identity = 104/277 (37.55%), Postives = 135/277 (48.74%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAVRSSFGRPPVAGDTN-SGDRRKGFTHF------EKHRKSTSCSSV 60
           M+  D FC S ASTAVR S     +  D N +G RR   +H       +K  K+  C S 
Sbjct: 1   MRFSDIFCSSPASTAVRHS----TLHHDGNVTGGRRSFQSHLRSQNPSKKKDKTVPCFSS 60

Query: 61  N-----------------------------RKDHIDLRRKSCADVDDL---KSSVSGSSG 120
                                         R   + +RRKS ADV DL   +SS+  SS 
Sbjct: 61  EMPLIPIPRHLSCRNSFESPSGFRPKIASARGSDVQIRRKSSADVSDLRRSRSSLLSSSS 120

Query: 121 RYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKVSSLKRSLTVHEYRRSLKSPSS 180
           RYLL D   +      D +D    +   +  +    + V+S   S        S  S SS
Sbjct: 121 RYLLKDHKSL----KGDDKDLWLSSDRSKDLILYRDRNVTSSASS--------SSSSSSS 180

Query: 181 VLESPVLKTSSLAHSR-HQVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKVTI 232
              S V   SS A S   QVVVL+VS++CKGCE KV+KHISKMEGVTSY++D  TKKVT+
Sbjct: 181 SFSSSVTNVSSPAPSTDDQVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTV 240

[Close]

BLAST of Sed0013886 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 5.0e-22
Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 139 PSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKV 198
           P S   SP  K S    S  QVVVL+VSL+CKGC  KVKKH+SK++GVTSY++DF  KKV
Sbjct: 234 PQSSPPSPPEKNS----SSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKV 293

Query: 199 TIIGDVNPFDVLASVSKVKHAQLWP 224
           T+ GDV P  VLAS+SKVK+AQ WP
Sbjct: 294 TVTGDVTPLTVLASISKVKNAQFWP 314

[Close]

BLAST of Sed0013886 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 5.0e-22
Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 139 PSSVLESPVLKTSSLAHSRHQVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKV 198
           P S   SP  K S    S  QVVVL+VSL+CKGC  KVKKH+SK++GVTSY++DF  KKV
Sbjct: 234 PQSSPPSPPEKNS----SSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKV 293

Query: 199 TIIGDVNPFDVLASVSKVKHAQLWP 224
           T+ GDV P  VLAS+SKVK+AQ WP
Sbjct: 294 TVTGDVTPLTVLASISKVKNAQFWP 314

[Close]

BLAST of Sed0013886 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 92/266 (34.59%), Postives = 124/266 (46.62%), Query Frame = 0


Query: 1   MKKLDFFCKSRASTAV----------------------RSSFGRPPVAGD---------- 60
           MK   F+C S+ASTA                       R SF  P  +GD          
Sbjct: 1   MKAGMFYCASQASTATANGERTVTARAIDRHNPIIKDGRRSFTAPCSSGDDYVAPYRQLS 60

Query: 61  ------TNSGDRRKGFTHFEKHRKSTSCSSVNRKDH-IDLRRKSCADVDDLKSSVSGSSG 120
                 ++SGD +      +K R+S S S +    + + L RKS   V     +  GS+ 
Sbjct: 61  KITRVPSSSGDGKS--VQVDKGRRSNSGSLMKLISYDVSLARKSFGCVVATPKTPPGST- 120

Query: 121 RYLLGDSPFIDWLPTADGEDFQAPAPEERKAMNLGSKKVSSLKRSLTVHEYRRSLKSPSS 180
           RYLLG  P    L  + G+D  A    E  A   GS        S  V E ++S  S S 
Sbjct: 121 RYLLGSDPVS--LAGSTGQDTVATEESEASAPKRGS--------SGPVEEKKKSSGSGSD 180

Query: 181 VLESPVLKTSSLAHSRHQVVVLKVSL--NCKGCENKVKKHISKMEGVTSYSVDFTTKKVT 226
                            QVVVL+VSL  +C+GC+ KVKKH+SKM+GVTS+++DF +KKVT
Sbjct: 181 -----------------QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVT 236

[Close]

BLAST of Sed0013886 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 98.6 bits (244), Expect = 7.3e-21
Identity = 42/79 (53.16%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 149 KTSSLAHSRHQVVVLKVSLNCKGCENKVKKHISKMEGVTSYSVDFTTKKVTIIGDVNPFD 208
           K ++   +  QVVVLKVSL+C+GCE KV+KH+++M+GVTS+++DF  KKVT+ GD+ P +
Sbjct: 171 KKTTCGDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLE 230

Query: 209 VLASVSKVKHAQLWPSPHV 228
           +L S+SKVK+AQ W +P +
Sbjct: 231 ILDSISKVKNAQFWTNPTI 249

The following BLAST results are available for this feature:

BLAST of Sed0013886 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901867.1	3.8e-96	80.41	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like [Benincasa hispida]	[more]
XP_004148220.1	1.1e-87	75.62	protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Cucumis sativus] >KGN47352.1 hypothet...	[more]
KAG6570732.1	6.1e-86	78.48	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2, partial [Cucurbita argyrosperma subsp...	[more]
XP_022986932.1	7.9e-86	78.48	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like [Cucurbita maxima]	[more]
XP_022148318.1	7.9e-86	77.08	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Momordica charantia]	[more]

BLAST of Sed0013886 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDS4	7.1e-21	62.35	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q8RXH8	1.6e-20	34.59	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q58FZ0	1.0e-19	53.16	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q84J88	1.3e-09	42.03	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
O82089	5.3e-08	45.45	Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1	[more]

BLAST of Sed0013886 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG24	5.4e-88	75.62	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G302690 PE=4 SV...	[more]
A0A6J1J8X9	3.8e-86	78.48	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1D3S6	3.8e-86	77.08	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Momordica charantia...	[more]
A0A6J1FTK0	3.2e-85	77.82	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1G708	1.8e-83	77.33	protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Sed0013886 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28660.1	3.6e-28	37.55	Chloroplast-targeted copper chaperone protein	[more]
AT5G02600.2	5.0e-22	62.35	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	5.0e-22	62.35	Heavy metal transport/detoxification superfamily protein	[more]
AT3G53530.1	1.1e-21	34.59	Chloroplast-targeted copper chaperone protein	[more]
AT2G37390.1	7.3e-21	53.16	Chloroplast-targeted copper chaperone protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 164..215 e-value: 8.4E-13 score: 48.5
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 159..219 score: 11.153432
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 162..219 e-value: 1.01181E-11 score: 56.8453
None	No IPR available	GENE3D	3.30.70.100		coord: 156..220 e-value: 5.3E-16 score: 60.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..43
None	No IPR available	PANTHER	PTHR46119:SF12	HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 1..236
IPR044526	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3	PANTHER	PTHR46119	OS08G0405700 PROTEIN	coord: 1..236
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 158..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013886.1	Sed0013886.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding