Sed0013865 (gene) Chayote v1

Overview


Name	Sed0013865
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CASP-like protein
Location	LG14: 4251320 .. 4254606 (+)
RNA-Seq Expression	Sed0013865
Synteny	Sed0013865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAGAGCTTGAGTTCTTCCCAACGAAACTGTGTGAAATTCCAACGAAGAAGATGACGAATTCATGGACTTTGGATCATCTCTTCAATCTCTAACAGTAAAGAATCTTCGCCTTTTCATCTGAGAAATCAACTTCTTTACATTTCTCTTTCTACTGTACTGCCTCTGCTGCAACTGATTAGGGTTTCCAACTTCGATTTCAGCTCTGAAATCGAACGCCATGAATATAAGCCGGCCGTCGGTGCATCCGGTGGAGGCGCCGCCGCTGACGGAAGGAGCGCCGAGAATGAGGATGAAGGATGTGCAGGGCATGCCGGGAACGCAAGGTGGACTTGCTCTTCGTTTTCTTCAGTTCGTGTTTGCTGCGGTTTCTCTCTGTGTTATGGCCACTACCAGTGATTTCCCCTCCGTCACCGCGTTTCGGTACGATTATTAGCTTTTGTTCTGTGTGATGTTTTCGATTTTGTGATTGTGATCGTCTTCAAATCTTCGATCTGGCGTTGATGAACTGAAACGAGTATGTTTGATTTGACTAAGAAGCATTTAGCGTGATTTTGATGTCGTTCAGAATGCGTGTTTATTCTTCCGTTTTTTCTCTAGATTTCGCTCCAATATGTTTACCGATGAACCTTGAATTCTGTTGATGGTGATAGCGATAACTTGTATTACTTTATCGCTAAGGTCTAGCGTTTTGAACATGTTTTGAGACTCGATGGATCCCTCAGGCATGGAGGGAAGTTCGTACAGACATGCAGAGAAGTTGTTGCCTTAGCTGTGGAGTGTGTTTAATTTTTCATAATCGGGAATCAGAGTTTCGCTCTGCGTGGATGTGCTAGTTACAAAGCCTGAACCAACTACGATTAAGCTAATTTGTGAGTTTCGACCTAAGATTTCCTAAGGAACCGGGTGTCGAGGACTTGGGTGTGTTCTACAAGAAGGAAACCAAGAGGCTTATATTCTACACTCTTGAAACCACTATTTTGTTCTTCAGAACATAGCGCATAGGTTGTGGGTTGGTTATTTATCCGATAATTCAGTTCATATTTCCAATGGGAAAAAATGTTTTATTATTCATTTCAGTTCCAATGACACTTCTTGTGATCAAGAATTGTACTGATTTATTGTTAATTGAGTTTGCTCGGTTTCTTTTACTTCTAATTCTCATCATTTTATCAATACCAACAGGAGTTTTTTTTGTCACCTGAGGATATGTTCGTATGTATTTTCTGCTCACGTACTTTACTTTATGATGCTGAAAAGTTAGTTTTCTCTTATAAAAGAATGTTTGTTTGATAACGTTACTCATAGTTAAAACTTGTGGTTTTAAGGTGTCCTATGTATGTTATCATTTAATTTTAACTTTATGTTCATTTTTTCATATGGAACTATTGCTGTTTTTTGTTCTCTCAGGTATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGCTTTTCGTTGGCAATAGTTGATGCATATGCCTTATTAGTAAGGCGAAGCCTGCGGAACTGCGCAATGGTTGGTTTGTTCACTTTTGGTGATGCGGTAAGAACATTTTTCATGCTACACCGAAACATACATAGCAGATCTGTATGCATATTCTATTTGTAATCCAGGTGCTTGTTAAAGTTGCATAATTCTACTTTTAGTAAACGAGATTCAGCTGTGACATTACTCCTTCGATGTCTCTTGGTGCCTACCTGGCCTAAGAATGGGTGTGGTTACCCTTGTTCCAAAAAAAAAAAAATGCACTCTTAGAAAACTAGGTAGCAGACTAGATTGTCATTCAGCTTTTTTGGAAGCTAAGGTTATGTTTGGTTGCATGAATGAGAGAATCCAAGTGAAACTTCTTCTTTGTTTGGTTCGCCTATTTCTGAATCGTAATAGAATAAGATTTCTATTGCTAAACAGAGTCTAGCTCAACTAGCCTAAAGTGCTAGGTTATGATTACGATTTACGAGTCATAAATTCGAATCTCCTACCCTAATATTTAAAAAAAAGAAAAAGAAATAAGAAAAAAGAATAAGCGTTCATTAGAATGCTTCAACCTCGTTGGAACCTCCGAGGTATGGTCCATTGGAGGTCTTAGGTTCGGACCTACGAGTGAGCCCTATAATTAATTTTATATAATTTTAGAGGCCTCATTGCCATGAGATCCCATTATATTAATTTTATACCATATTTATTCATTCAGTATAATTATGTTTTTTTGTTTGAAATCCTATAATTATGTTAATTTCAATTGATATTTTTATGATAAAAACCAATTTGTTGAATCAATATAACTTTATTTTATTAAATTTCTTAAGTTCGATTTCAAAAAAAAAAAAAAAAAAAACTGAATTTCAAGTAGGACTTATATAAGTAGAAAACTGTCCCCATGCAGGTTACATCCACTCTTACATTCTCTGCTGCATGTTCATCAGCTGGGATTACTGTTCTCATTGGCAATGATCTCAATAAATGTGGCCTGAACCACTGCACGCAGTTCGAGTCTGCCACTGCAATGGCCTTCATTAGTTGGTTTGCCGTTTCACCTTCATTTCTCTTGAACTTTTGGTCGTTGGCTTCTCGACGAGATTAGAAATTCTGCTTCTCTTGCATCATGTTCTACATTGCTGGCACCAAGTCGGGATTACGAGAACCGGTCCTTGCTCAACAGTAACTTGTTCCCCCTCCTCAACAACAACTTGTTCCTCTTTCTCAACAAGTGCTGAGAAAGCTAGACCTATTAAGGAAGAGAAACAATTTGCTGTTGAGCACAGATCTGTTCTCATAATTCCGAACTTGGTGCCAACAATGTAGAACAGGATGCAACAATAATAACTGTCCGTGTCATAAGTGCATTCTGCCATGCACCAAAGCTTCTGCTTCTGGTACATGGACTGTGACTATGAATATGGACTAAATCTACCACCAAGAATTTAGGGATATAACTTGAGAAGTTATATTCCTAAATAATTGGAGGAGGTTGAGAAGCTTGTGGATGCATGCAGAACCTGAAGTTTTTGGTATTTATGTTTGTCGATAGGCAAGACACTGAGAGACATCAAAGGAATAGAGACACGAAAGTTGTCTATAAATGGAGAAGATGAGGTTTGTAAAGTAGCTTAGTCGCGGGCACTCTACGCGAAGGCACCATGGATTGTCTTCTCGCCTAGTTTGTGTGTTTTATTTATGTTGGAATAGTTGTAAATCACAGAGACATATTTTCATTAATGGGAGTTGGCTTAATAGTCGAAGGGTATTGAAGAATCAAAATGTTAGGTATGAGTTCAATTTATAGTAGC

mRNA sequence

GTCAGAGCTTGAGTTCTTCCCAACGAAACTGTGTGAAATTCCAACGAAGAAGATGACGAATTCATGGACTTTGGATCATCTCTTCAATCTCTAACACTCTGAAATCGAACGCCATGAATATAAGCCGGCCGTCGGTGCATCCGGTGGAGGCGCCGCCGCTGACGGAAGGAGCGCCGAGAATGAGGATGAAGGATGTGCAGGGCATGCCGGGAACGCAAGGTGGACTTGCTCTTCGTTTTCTTCAGTTCGTGTTTGCTGCGGTTTCTCTCTGTGTTATGGCCACTACCAGTGATTTCCCCTCCGTCACCGCGTTTCGGTATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGCTTTTCGTTGGCAATAGTTGATGCATATGCCTTATTAGTAAGGCGAAGCCTGCGGAACTGCGCAATGGTTGGTTTGTTCACTTTTGGTGATGCGGTTACATCCACTCTTACATTCTCTGCTGCATGTTCATCAGCTGGGATTACTGTTCTCATTGGCAATGATCTCAATAAATGTGGCCTGAACCACTGCACGCAGTTCGAGTCTGCCACTGCAATGGCCTTCATTAGTTGGCAAGACACTGAGAGACATCAAAGGAATAGAGACACGAAAGTTGTCTATAAATGGAGAAGATGAGGTTTGTAAAGTAGCTTAGTCGCGGGCACTCTACGCGAAGGCACCATGGATTGTCTTCTCGCCTAGTTTGTGTGTTTTATTTATGTTGGAATAGTTGTAAATCACAGAGACATATTTTCATTAATGGGAGTTGGCTTAATAGTCGAAGGGTATTGAAGAATCAAAATGTTAGGTATGAGTTCAATTTATAGTAGC

Coding sequence (CDS)

ATGAATATAAGCCGGCCGTCGGTGCATCCGGTGGAGGCGCCGCCGCTGACGGAAGGAGCGCCGAGAATGAGGATGAAGGATGTGCAGGGCATGCCGGGAACGCAAGGTGGACTTGCTCTTCGTTTTCTTCAGTTCGTGTTTGCTGCGGTTTCTCTCTGTGTTATGGCCACTACCAGTGATTTCCCCTCCGTCACCGCGTTTCGGTATCTTGTTGCTGCTGTTGGCTTGCAATGCTTGTGGAGCTTTTCGTTGGCAATAGTTGATGCATATGCCTTATTAGTAAGGCGAAGCCTGCGGAACTGCGCAATGGTTGGTTTGTTCACTTTTGGTGATGCGGTTACATCCACTCTTACATTCTCTGCTGCATGTTCATCAGCTGGGATTACTGTTCTCATTGGCAATGATCTCAATAAATGTGGCCTGAACCACTGCACGCAGTTCGAGTCTGCCACTGCAATGGCCTTCATTAGTTGGCAAGACACTGAGAGACATCAAAGGAATAGAGACACGAAAGTTGTCTATAAATGGAGAAGATGA

Protein sequence

MNISRPSVHPVEAPPLTEGAPRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMATTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTSTLTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISWQDTERHQRNRDTKVVYKWRR

Homology

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BLAST of Sed0013865 vs. NCBI nr
Match: XP_038881202.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 7.9e-75
Identity = 147/162 (90.74%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQF+FAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSL +VDAYALLVRRSLRNC++VGLFTFGDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLGVVDAYALLVRRSLRNCSIVGLFTFGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. NCBI nr
Match: XP_004143253.1 (CASP-like protein 5A2 [Cucumis sativus] >XP_008449244.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0047255.1 CASP-like protein 5A1 [Cucumis melo var. makuwa] >KGN48158.1 hypothetical protein Csa_003346 [Cucumis sativus] >TYK05890.1 CASP-like protein 5A1 [Cucumis melo var. makuwa])

HSP 1 Score: 287.7 bits (735), Expect = 6.7e-74
Identity = 146/162 (90.12%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQFVFA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSLA+VDAYALLVRRSLRNC++VGLFT GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. NCBI nr
Match: XP_022978910.1 (CASP-like protein 5A2 [Cucurbita maxima] >KAG6604423.1 CASP-like protein 5A1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034570.1 CASP-like protein 5A1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-73
Identity = 144/162 (88.89%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQF+FAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+NC++VGLFT GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. NCBI nr
Match: XP_023543053.1 (CASP-like protein 5A2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.8 bits (730), Expect = 2.5e-73
Identity = 143/162 (88.27%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQF+FAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+NC++VGLFT GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATA+AFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATALAFISW 162

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BLAST of Sed0013865 vs. NCBI nr
Match: XP_022926121.1 (CASP-like protein 5A2 [Cucurbita moschata])

HSP 1 Score: 285.4 bits (729), Expect = 3.3e-73
Identity = 143/162 (88.27%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQF+FA VSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAVVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+NC++VGLFT GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.0e-56
Identity = 111/162 (68.52%), Postives = 130/162 (80.25%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPL----TEGAPRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+S  SVHPVE PP      E  PR+RM D++GMPGT  GLALRF QF+FAA +LCVMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           +TSDFPSVTAF YLVAA GLQ LWS +LA+VD YA++V+RSL+N  +V LF  GD VTST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTF+AAC+SAGITVLI NDLN C  NHC QFE++TA+AFISW
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISW 162

[Close]

BLAST of Sed0013865 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.4e-53
Identity = 107/159 (67.30%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPL-TEGAPRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMATTS 60
           MN S P+VHPVEAPP     APR+RMKD QGMPGT GGLALR  QF FA V+  +M +T 
Sbjct: 1   MNPSHPAVHPVEAPPTDVHHAPRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIMLSTD 60

Query: 61  DFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTSTLTF 120
           DF +VTAF YLVAA  LQCLWS +LA++D YALLV+RSLRN  +V LF  GD VT+TLTF
Sbjct: 61  DFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTATLTF 120

Query: 121 SAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           +AAC+SAGITVLIGNDL +C  NHC ++E+ATAMAF+SW
Sbjct: 121 AAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSW 159

[Close]

BLAST of Sed0013865 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.4e-52
Identity = 109/161 (67.70%), Postives = 125/161 (77.64%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGAPRMR---MKDVQGMPGTQGGLALRFLQFVFAAVSLCVMAT 60
           M  SRP+VHPVEAPP  + A + R   MKD+ GMPGT GGL LR  QF FAAV+L VMA+
Sbjct: 1   MFASRPAVHPVEAPPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAS 60

Query: 61  TSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTSTL 120
           T+DFPSVT+F +LVAA  LQCLWSFSLAIVD YALLV+R LRN   V LF  GD +T+ L
Sbjct: 61  TNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           TFSAAC+S+GITVLI NDL+ C  NHC  FESATAMAF+SW
Sbjct: 121 TFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSW 161

[Close]

BLAST of Sed0013865 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.5e-52
Identity = 109/161 (67.70%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGAPR---MRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMAT 60
           M  SRP+VHPVEAPP T+   +   + MKD+ GMPGT GGL LR  QFVFA V+L VMA+
Sbjct: 1   MFASRPAVHPVEAPPPTDPVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMAS 60

Query: 61  TSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTSTL 120
           TSDFPSVTAF YLVAA  +QCLWSFSLAIVD YALLV+R LRN   V LF  GD +T+ L
Sbjct: 61  TSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           TF AACSSAGITVLI NDLN C  NHC  F++ATA+AF+SW
Sbjct: 121 TFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSW 161

[Close]

BLAST of Sed0013865 vs. ExPASy Swiss-Prot
Match: Q6NPF8 (CASP-like protein 5A1 OS=Arabidopsis thaliana OX=3702 GN=At2g37200 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 112/163 (68.71%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPL--TEGA---PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVM 60
           MN+SRP++HPV+A P+  T GA   P +RMKDVQGMPGT GGL LR  QFV A +S+ VM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  ATTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTS 120
            TTSDF S TAF  LV AV LQ LWS SL I+DAYALLVRRSLRN ++V  FT GD VTS
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           TLTF+AA +SAGITVLI NDL +C +NHCT+FE+ATAMAFISW
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISW 163

[Close]

BLAST of Sed0013865 vs. ExPASy TrEMBL
Match: A0A5A7U0S9 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00210 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.2e-74
Identity = 146/162 (90.12%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQFVFA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSLA+VDAYALLVRRSLRNC++VGLFT GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. ExPASy TrEMBL
Match: A0A0A0KF35 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G445220 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.2e-74
Identity = 146/162 (90.12%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQFVFA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSLA+VDAYALLVRRSLRNC++VGLFT GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. ExPASy TrEMBL
Match: A0A1S3BLL2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103491180 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.2e-74
Identity = 146/162 (90.12%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQFVFA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAAVGLQCLWSFSLA+VDAYALLVRRSLRNC++VGLFT GDAVTST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. ExPASy TrEMBL
Match: A0A6J1IRK7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478720 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.5e-74
Identity = 144/162 (88.89%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQF+FAAVSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+NC++VGLFT GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. ExPASy TrEMBL
Match: A0A6J1EDZ3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433327 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.6e-73
Identity = 143/162 (88.27%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPLTEGA----PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+SRPSVHPVEAPPLTEGA    PR+RMKDVQGMPGT GGLALR LQF+FA VSLCVMA
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTTGGLALRLLQFIFAVVSLCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           TTSDFPSVTAFRYLVAA GLQCLWSFSLA+VDAYALLVRRSL+NC++VGLFT GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAAGLQCLWSFSLAVVDAYALLVRRSLQNCSIVGLFTIGDAITST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTFSAACSSAGITVLIGNDLNKCG+NHC QFESATAMAFISW
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISW 162

[Close]

BLAST of Sed0013865 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 218.8 bits (556), Expect = 3.6e-57
Identity = 111/162 (68.52%), Postives = 130/162 (80.25%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPL----TEGAPRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVMA 60
           MN+S  SVHPVE PP      E  PR+RM D++GMPGT  GLALRF QF+FAA +LCVMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTST 120
           +TSDFPSVTAF YLVAA GLQ LWS +LA+VD YA++V+RSL+N  +V LF  GD VTST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           LTF+AAC+SAGITVLI NDLN C  NHC QFE++TA+AFISW
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISW 162

[Close]

BLAST of Sed0013865 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 201.1 bits (510), Expect = 7.7e-52
Identity = 112/163 (68.71%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MNISRPSVHPVEAPPL--TEGA---PRMRMKDVQGMPGTQGGLALRFLQFVFAAVSLCVM 60
           MN+SRP++HPV+A P+  T GA   P +RMKDVQGMPGT GGL LR  QFV A +S+ VM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  ATTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCAMVGLFTFGDAVTS 120
            TTSDF S TAF  LV AV LQ LWS SL I+DAYALLVRRSLRN ++V  FT GD VTS
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFSAACSSAGITVLIGNDLNKCGLNHCTQFESATAMAFISW 159
           TLTF+AA +SAGITVLI NDL +C +NHCT+FE+ATAMAFISW
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISW 163

[Close]

BLAST of Sed0013865 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 122.1 bits (305), Expect = 4.5e-28
Identity = 67/135 (49.63%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 25  MKDVQGMPGTQGGLALRFLQFVFAAVSLCVMATTSDFPSVTAFRYLVAAVGLQCLWSFSL 84
           M D+ G PGT  GL LR  Q VFAA S+  M T+  F S TAF YL+AA+GLQ +WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 85  AIVDAYALLVRRSLRNCAMVGLFTFGDAVTSTLTFSAACSSAGITVLIGNDLNKCGLN-H 144
           AI+D +AL+ +++L +  +V LF  GD VTSTL+ + A SSAGITVL   DL  C     
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 145 CTQFESATAMAFISW 159
           C +++ + A+AF+ W
Sbjct: 121 CWKYQLSVALAFLCW 135

[Close]

BLAST of Sed0013865 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 63/137 (45.99%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 25  MKDVQGMPGTQGGLALRFLQFVFAAVSLCVMATTSDFPSVTAFRYLVAAVGLQCLWSFSL 84
           MK + G PGT  GL LR  Q   AA S+ VM +  +F   TAF YL+A++GLQ LWSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 85  AIVDAYALLVRRSLRNCAMVGLFTFGDAVTSTLTFSAACSSAGITVLIGNDLNKCGLNH- 144
           A +D YAL  ++ L+N  +V LF  GD VT+ L+ +AACSSAG+ VL   D+  C     
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 145 --CTQFESATAMAFISW 159
             C ++E A A++F++W
Sbjct: 121 YPCLRYEVAVALSFVTW 137

[Close]

BLAST of Sed0013865 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 111.3 bits (277), Expect = 8.0e-25
Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 0


Query: 25  MKDVQGMPGTQGGLALRFLQFVFAAVSLCVMATTSDFPSVTAFRYLVAAVGLQCLWSFSL 84
           MK + G PGT  GL LR  Q   AA S+ VM ++ DF + TAF +LVA++GLQ +WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 85  AIVDAYALLVRRSLRNCAMVGLFTFGDAVTSTLTFSAACSSAGITVLIGNDLNKCGLN-- 144
           A +D YA+  +  LR+  ++ LFT GD VT+ L  +AACSSAG+TVL   D   C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 145 -HCTQFESATAMAFISW 159
             C +F+ +  ++F +W
Sbjct: 121 LSCDRFQISVGLSFFNW 137

The following BLAST results are available for this feature:

BLAST of Sed0013865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881202.1	7.9e-75	90.74	CASP-like protein 5A2 [Benincasa hispida]	[more]
XP_004143253.1	6.7e-74	90.12	CASP-like protein 5A2 [Cucumis sativus] >XP_008449244.1 PREDICTED: CASP-like pro...	[more]
XP_022978910.1	1.1e-73	88.89	CASP-like protein 5A2 [Cucurbita maxima] >KAG6604423.1 CASP-like protein 5A1, pa...	[more]
XP_023543053.1	2.5e-73	88.27	CASP-like protein 5A2 [Cucurbita pepo subsp. pepo]	[more]
XP_022926121.1	3.3e-73	88.27	CASP-like protein 5A2 [Cucurbita moschata]	[more]

BLAST of Sed0013865 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN3	5.0e-56	68.52	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
P0DI70	1.4e-53	67.30	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
Q10Q78	4.4e-52	67.70	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
P0DI68	7.5e-52	67.70	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
Q6NPF8	1.1e-50	68.71	CASP-like protein 5A1 OS=Arabidopsis thaliana OX=3702 GN=At2g37200 PE=2 SV=1	[more]

BLAST of Sed0013865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0S9	3.2e-74	90.12	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00...	[more]
A0A0A0KF35	3.2e-74	90.12	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G445220 PE=3 SV=1	[more]
A0A1S3BLL2	3.2e-74	90.12	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103491180 PE=3 SV=1	[more]
A0A6J1IRK7	5.5e-74	88.89	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478720 PE=3 SV=1	[more]
A0A6J1EDZ3	1.6e-73	88.27	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433327 PE=3 SV=1	[more]

BLAST of Sed0013865 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	3.6e-57	68.52	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	7.7e-52	68.71	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	4.5e-28	49.63	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	1.2e-25	45.99	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	8.0e-25	44.53	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 32..160 e-value: 3.3E-25 score: 88.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 16..175
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 16..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013865.1	Sed0013865.1	mRNA
Sed0013865.2	Sed0013865.2	mRNA
Sed0013865.3	Sed0013865.3	mRNA
Sed0013865.4	Sed0013865.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane