Sed0013840 (gene) Chayote v1

Overview


Name	Sed0013840
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribulose bisphosphate carboxylase large chain
Location	Contig00297: 12435 .. 14078 (+)
RNA-Seq Expression	Sed0013840
Synteny	Sed0013840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAATACCATGGTCTAATAACGAACCATTCTGATTAGTTGATAATATTAGTTGAGAATTTTGTGAAAAGATTCCTATAAAAGGTTTCATTAACTCCTAATTCATGTCGAGTAGACCTTGTTGTTGCGAGAATTCTTAATTCATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCCGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGCCGATGCTATGGCATCGAGCCTGTTGCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTATCCCCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGATTCAAGGCTCTACGCGCTCTACGTCTGGAGGATTTGCGAATCCCTACTGCTTATGTTAAAACTTTCCAAGGCCCACCTCACGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCCCAGGCGGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGCAGGTACATGCGAAGAAATGATCAAAAGGGCTGTATTTGCCAGAGAATTGGGAGTTCCTATCGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGGTATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGGAAACTTGAAGGGAAAGAGACATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGACCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTGCCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTACTACAATTCGGAGGAGGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGACGTGATCTTGTTCGTGAGGGTAATGAAATTATCCGTGAGGCTGCTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGCGATCAAATTTGAATTTGAGGCAGTAGATACTTTGTAATCCCGTAATTACTCTTCGTTCTTTTAATTGACTTTCAATTAAACTAAACTCGGC

mRNA sequence

ATCAAATACCATGGTCTAATAACGAACCATTCTGATTAGTTGATAATATTAGTTGAGAATTTTGTGAAAAGATTCCTATAAAAGGTTTCATTAACTCCTAATTCATGTCGAGTAGACCTTGTTGTTGCGAGAATTCTTAATTCATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCCGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGCCGATGCTATGGCATCGAGCCTGTTGCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTATCCCCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGATTCAAGGCTCTACGCGCTCTACGTCTGGAGGATTTGCGAATCCCTACTGCTTATGTTAAAACTTTCCAAGGCCCACCTCACGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCCCAGGCGGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGCAGGTACATGCGAAGAAATGATCAAAAGGGCTGTATTTGCCAGAGAATTGGGAGTTCCTATCGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGGTATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGGAAACTTGAAGGGAAAGAGACATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGACCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTGCCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTACTACAATTCGGAGGAGGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGACGTGATCTTGTTCGTGAGGGTAATGAAATTATCCGTGAGGCTGCTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGCGATCAAATTTGAATTTGAGGCAGTAGATACTTTGTAATCCCGTAATTACTCTTCGTTCTTTTAATTGACTTTCAATTAAACTAAACTCGGC

Coding sequence (CDS)

ATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCCGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGCCGATGCTATGGCATCGAGCCTGTTGCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTATCCCCTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGATTCAAGGCTCTACGCGCTCTACGTCTGGAGGATTTGCGAATCCCTACTGCTTATGTTAAAACTTTCCAAGGCCCACCTCACGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCTAAGAATTATGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAACGTGAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCCCAGGCGGAAACAGGTGAAATCAAAGGACATTACTTGAATGCTACTGCAGGTACATGCGAAGAAATGATCAAAAGGGCTGTATTTGCCAGAGAATTGGGAGTTCCTATCGTAATGCATGACTACTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAATGCATGCCGTTATTGATAGACAGAAGAATCATGGTATGCACTTCCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGGAAACTTGAAGGGAAAGAGACATCACTTTAG

Protein sequence

MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGKETSL

Homology

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BLAST of Sed0013840 vs. NCBI nr
Match: YP_009456154.1 (ribulose-1 [Lagenaria siceraria] >YP_010131102.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Benincasa hispida] >AUJ21920.1 ribulose-1 [Lagenaria siceraria] >QNM38539.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Lagenaria siceraria var. microcarpa] >QPZ75749.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Benincasa hispida])

HSP 1 Score: 708.0 bits (1826), Expect = 4.1e-200
Identity = 340/345 (98.55%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. NCBI nr
Match: QKX48481.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Luffa acutangula] >QKX48567.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Luffa aegyptiaca])

HSP 1 Score: 707.2 bits (1824), Expect = 7.0e-200
Identity = 338/345 (97.97%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEY+TKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEM+KRA+FARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. NCBI nr
Match: QZL38601.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Citrullus naudinianus])

HSP 1 Score: 707.2 bits (1824), Expect = 7.0e-200
Identity = 339/345 (98.26%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYG+EPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGLEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. NCBI nr
Match: YP_009325997.1 (ribulose-1 [Citrullus lanatus] >YP_009348039.1 ribulose-1 [Citrullus mucosospermus] >YP_009420802.1 ribulose-1 [Citrullus colocynthis] >YP_009431565.1 ribulose-1 [Citrullus amarus] >YP_009431650.1 ribulose-1 [Citrullus rehmii] >APW82469.1 ribulose-1 [Citrullus lanatus subsp. vulgaris] >APD52488.1 ribulose-1 [Citrullus lanatus] >APW82554.1 ribulose-1 [Citrullus lanatus subsp. vulgaris] >APW82639.1 ribulose-1 [Citrullus lanatus subsp. vulgaris] >APW82724.1 ribulose-1 [Citrullus mucosospermus])

HSP 1 Score: 706.8 bits (1823), Expect = 9.1e-200
Identity = 339/345 (98.26%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEM+KRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. NCBI nr
Match: YP_009561440.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Deutzianthus tonkinensis] >QAT19529.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Deutzianthus tonkinensis])

HSP 1 Score: 706.4 bits (1822), Expect = 1.2e-199
Identity = 338/345 (97.97%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTP+Y+TKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYQTKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYK+QAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. ExPASy Swiss-Prot
Match: P27064 (Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL PE=1 SV=5)

HSP 1 Score: 690.3 bits (1780), Expect = 1.2e-197
Identity = 330/338 (97.63%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAI+KSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYL 240

Query: 248 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATAGTCEEM+KRA+FARELG PIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMMKRAIFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 338

[Close]

BLAST of Sed0013840 vs. ExPASy Swiss-Prot
Match: O62943 (Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban OX=76396 GN=rbcL PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 1.5e-197
Identity = 330/338 (97.63%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIPT+Y+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPTSYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAI+KSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYL 240

Query: 248 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           IDRQKNHGMHFRVLAKALR+SGGDHIHAGTVVGKLEG+
Sbjct: 301 IDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGE 338

[Close]

BLAST of Sed0013840 vs. ExPASy Swiss-Prot
Match: Q01873 (Ribulose bisphosphate carboxylase large chain OS=Liquidambar styraciflua OX=4400 GN=rbcL PE=3 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 3.4e-197
Identity = 333/338 (98.52%), Postives = 335/338 (99.11%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCY IEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIP AY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYK+QAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYL 240

Query: 248 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 338

[Close]

BLAST of Sed0013840 vs. ExPASy Swiss-Prot
Match: Q09X09 (Ribulose bisphosphate carboxylase large chain OS=Morus indica OX=248361 GN=rbcL PE=3 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 3.4e-197
Identity = 331/338 (97.93%), Postives = 335/338 (99.11%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYE KDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYEVKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCY IEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYNIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIP AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPNAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 240

Query: 248 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATAGTCEEM+KRAVFARELGVPIVMHDYLTGGFTANT+LAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 338

[Close]

BLAST of Sed0013840 vs. ExPASy Swiss-Prot
Match: P27066 (Ribulose bisphosphate carboxylase large chain OS=Glycine max OX=3847 GN=rbcL PE=1 SV=3)

HSP 1 Score: 688.7 bits (1776), Expect = 3.4e-197
Identity = 328/338 (97.04%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCYG+EPVAGEE+Q+IAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGLEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAI+KSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYL 240

Query: 248 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATAGTCEEM+KRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           IDRQKNHGMHFRVLAKALR+SGGDH+HAGTVVGKLEG+
Sbjct: 301 IDRQKNHGMHFRVLAKALRLSGGDHVHAGTVVGKLEGE 338

[Close]

BLAST of Sed0013840 vs. ExPASy TrEMBL
Match: A0A7T3QNK9 (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit OS=Benincasa hispida OX=102211 GN=rbcL PE=4 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.0e-200
Identity = 340/345 (98.55%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. ExPASy TrEMBL
Match: A0A2I6C082 (Ribulose bisphosphate carboxylase large chain OS=Lagenaria siceraria OX=3668 GN=rbcL PE=3 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.0e-200
Identity = 340/345 (98.55%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. ExPASy TrEMBL
Match: A0A7G9IT45 (Ribulose bisphosphate carboxylase large chain OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=rbcL PE=3 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 2.0e-200
Identity = 340/345 (98.55%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. ExPASy TrEMBL
Match: A0A7D4XNS8 (Ribulose bisphosphate carboxylase large chain OS=Luffa acutangula OX=56866 GN=rbcL PE=3 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 3.4e-200
Identity = 338/345 (97.97%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEY+TKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEM+KRA+FARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. ExPASy TrEMBL
Match: A0A7D4XNL6 (Ribulose bisphosphate carboxylase large chain OS=Luffa aegyptiaca OX=3670 GN=rbcL PE=3 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 3.4e-200
Identity = 338/345 (97.97%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEY+TKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSV 120
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEE+Q+IAYVAYPLDLFEEGSV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVAYPLDLFEEGSV 120

Query: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT 180
           TNMFTSIVGNVFGFKALRALRLEDLRIPTAY+KTFQGPPHGIQVERDKLNKYGRPLLGCT
Sbjct: 121 TNMFTSIVGNVFGFKALRALRLEDLRIPTAYIKTFQGPPHGIQVERDKLNKYGRPLLGCT 180

Query: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240
           IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG
Sbjct: 181 IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETG 240

Query: 241 EIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300
           EIKGHYLNATAGTCEEM+KRA+FARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI
Sbjct: 241 EIKGHYLNATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI 300

Query: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGK 346
           HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEG+
Sbjct: 301 HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGE 345

[Close]

BLAST of Sed0013840 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 682.2 bits (1759), Expect = 2.2e-196
Identity = 329/341 (96.48%), Postives = 333/341 (97.65%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVK+YKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI 127
           SSTGTWTTVWTDGLTSLDRYKGRCY IEPV GEE+QFIAYVAYPLDLFEEGSVTNMFTSI
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSI 120

Query: 128 VGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 187
           VGNVFGFKAL ALRLEDLRIP AY KTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
Sbjct: 121 VGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL 180

Query: 188 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 247
           SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL
Sbjct: 181 SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL 240

Query: 248 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV 307
           NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSL+HYCRDNGLLLHIHRAMHAV
Sbjct: 241 NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHIHRAMHAV 300

Query: 308 IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGKETS 349
           IDRQKNHGMHFRVLAKALR+SGGDHIHAGTVVGKLEG   S
Sbjct: 301 IDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGDRES 341

[Close]

BLAST of Sed0013840 vs. TAIR 10
Match: AT2G07732.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain )

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-53
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 189 AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLN 248
           AKNYGRAVYECLRGGL FTKDDENVNSQPFMRWRDRFLFCAEA+YK+QAETG IKGHYLN
Sbjct: 14  AKNYGRAVYECLRGGLYFTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAETGGIKGHYLN 73

Query: 249 ATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAH 290
           AT GTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAH
Sbjct: 74  ATPGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAH 114

[Close]

BLAST of Sed0013840 vs. TAIR 10
Match: ATMG00280.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain )

HSP 1 Score: 186.4 bits (472), Expect = 3.8e-47
Identity = 86/92 (93.48%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 189 AKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLN 248
           AKNYGRAVYECLRGGL FTKDDENVNSQPFMRWRDRFLFCAEA+YK+QAETG IKGHYLN
Sbjct: 14  AKNYGRAVYECLRGGLYFTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAETGGIKGHYLN 73

Query: 249 ATAGTCEEMIKRAVFARELGVPIVMHDYLTGG 281
           ATAGTCEEMIKRAVFARELGVPIVMHDYL  G
Sbjct: 74  ATAGTCEEMIKRAVFARELGVPIVMHDYLNRG 105

The following BLAST results are available for this feature:

BLAST of Sed0013840 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009456154.1	4.1e-200	98.55	ribulose-1 [Lagenaria siceraria] >YP_010131102.1 ribulose-1,5-bisphosphate carbo...	[more]
QKX48481.1	7.0e-200	97.97	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Luffa acutangula]...	[more]
QZL38601.1	7.0e-200	98.26	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Citrullus naudini...	[more]
YP_009325997.1	9.1e-200	98.26	ribulose-1 [Citrullus lanatus] >YP_009348039.1 ribulose-1 [Citrullus mucososperm...	[more]
YP_009561440.1	1.2e-199	97.97	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Deutzianthus tonk...	[more]

BLAST of Sed0013840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27064	1.2e-197	97.63	Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL...	[more]
O62943	1.5e-197	97.63	Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban OX=76396 GN=rbc...	[more]
Q01873	3.4e-197	98.52	Ribulose bisphosphate carboxylase large chain OS=Liquidambar styraciflua OX=4400...	[more]
Q09X09	3.4e-197	97.93	Ribulose bisphosphate carboxylase large chain OS=Morus indica OX=248361 GN=rbcL ...	[more]
P27066	3.4e-197	97.04	Ribulose bisphosphate carboxylase large chain OS=Glycine max OX=3847 GN=rbcL PE=...	[more]

BLAST of Sed0013840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7T3QNK9	2.0e-200	98.55	Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit OS=Benincasa hispi...	[more]
A0A2I6C082	2.0e-200	98.55	Ribulose bisphosphate carboxylase large chain OS=Lagenaria siceraria OX=3668 GN=...	[more]
A0A7G9IT45	2.0e-200	98.55	Ribulose bisphosphate carboxylase large chain OS=Lagenaria siceraria var. microc...	[more]
A0A7D4XNS8	3.4e-200	97.97	Ribulose bisphosphate carboxylase large chain OS=Luffa acutangula OX=56866 GN=rb...	[more]
A0A7D4XNL6	3.4e-200	97.97	Ribulose bisphosphate carboxylase large chain OS=Luffa aegyptiaca OX=3670 GN=rbc...	[more]

BLAST of Sed0013840 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00490.1	2.2e-196	96.48	ribulose-bisphosphate carboxylases	[more]
AT2G07732.1	2.1e-53	95.05	Ribulose bisphosphate carboxylase large chain, catalytic domain	[more]
ATMG00280.1	3.8e-47	93.48	Ribulose bisphosphate carboxylase large chain, catalytic domain	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	GENE3D	3.30.70.150		coord: 16..154 e-value: 2.7E-61 score: 207.4
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	SUPERFAMILY	54966	RuBisCO, large subunit, small (N-terminal) domain	coord: 16..156
IPR000685	Ribulose bisphosphate carboxylase, large subunit, C-terminal	PFAM	PF00016	RuBisCO_large	coord: 161..347 e-value: 7.2E-84 score: 281.5
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	GENE3D	3.20.20.110		coord: 156..349 e-value: 2.6E-93 score: 314.8
IPR036376	Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily	SUPERFAMILY	51649	RuBisCo, C-terminal domain	coord: 155..347
IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	PFAM	PF02788	RuBisCO_large_N	coord: 31..151 e-value: 7.7E-45 score: 152.0
IPR033966	RuBisCO	SFLD	SFLDS00014	RuBisCO	coord: 42..344 e-value: 0.0 score: 194.8
IPR033966	RuBisCO	PANTHER	PTHR42704	RIBULOSE BISPHOSPHATE CARBOXYLASE	coord: 1..346
None	No IPR available	SFLD	SFLDG00301	RuBisCO-like_proteins	coord: 42..344 e-value: 0.0 score: 194.8
IPR020878	Ribulose bisphosphate carboxylase, large chain, active site	PROSITE	PS00157	RUBISCO_LARGE	coord: 203..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013840.1	Sed0013840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0019253	reductive pentose-phosphate cycle
biological_process	GO:0015977	carbon fixation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity