Sed0013783 (gene) Chayote v1

Overview
NameSed0013783
Typegene
OrganismSechium edule (Chayote v1)
Descriptionrhodanese-like domain-containing protein 4, chloroplastic
LocationLG12: 5045985 .. 5047255 (-)
RNA-Seq ExpressionSed0013783
SyntenySed0013783
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACGCCCTAGAACCACAAATCTTTGACCTAAAGCGCTGCCACACGGAGTTTCAAGTGCCCGAACGAAATAGAAGCAACATAAAATGTGAGAAAACAAAAGGAACAAATTTACAAAGGTGATTGTGTAATTTTGGGATCATAATAGTGCTCAACTACTTGATATTAGAGAATTTGGTTGAACTTAGGAAAGTAGGTAGCCCCGATATTAAAAAGTTGGGCAAAAAGCCTGTGGTTATTACTTACAAAGGTGACGATAAGCCTGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAGTAAGACTTTGAACTAGAGTTAGCAAATGACCAATTTAGCCTATTGCCCTGTTTGATGGTTTGTAAAAGTTAACTATATAAACTACGGTGTTAATTGTTAAAAAACAATGACAGGACTAATAGGTACCATCTAGCTATACTAAATCACTAAGTTGAAGATATTTCAATTTTGTTCTTTTTGTTCACAAATCAATTAAGATGCATTTACCCTCCAATTTTGTTTGTGAAGTCAAACAGATATCAAAATATTTAAGTTTGGAAAGTGAAAGCAAGAATGTATATTAAAGTTTTCTATGGAAATTTGAAACCATCTGGTAGTCTACAATCATGGTTATTATGACTGCTAATGTTTGATAATGATCCGCTTAAGTTTTCTTTGGAGAAGACAGATATGATGGGAACTCTGAACTCGTCGCAGAGTTGATCGTTGTAAATGGATTCAAAGCTACTTTTGCAATTAAAGATGGTGCAGAAGGACCTAGTGGATGGACGGTTACACCCATATTCTTCTTTTTCTCCAAATTTATATTCAAGGATTTTTTTTTTCAGTGTGTTTATGTAAATTTTCATTTTGATCTGTGTCTTGTGCAGAATAGTGGTCTTCCTTGGTTAACACCAAAGTCACCTTTGAGTTTTAGCAGTCTAACAGATGCTATTGCTGGTGTGTTTGGAGTATGCATCTCTATTTCAATTTATTTATTTTCTCTGTTTTTTAAATAGCAATGCTTTAATTTATAAGAAAACATTCATTTTTCCCATTTGGTGTTATCTTTCTGGTGGTTTGTGTTGGCTAAAAATTATGGGTTGTCTGTAAGATTCTTGATTGAAATTTATGTGTAGGAGGATTTCAAGGTTTTCCTGCTTTGTTGCTCTTTTGTGCAATATGTTGATTGTGTGATGGATACAATGGAAAAACAAACAAACAACAATATTTGA

mRNA sequence

ATGGAGAACGCCCTAGAACCACAAATCTTTGACCTAAAGCGCTGCCACACGGAGTTTCAAGTGCCCGAACGAAATAGAAGCAACATAAAATGTGAGAAAACAAAAGGAACAAATTTACAAAGGAAAGTAGGTAGCCCCGATATTAAAAAGTTGGGCAAAAAGCCTGTGGTTATTACTTACAAAGGTGACGATAAGCCTGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAATATGATGGGAACTCTGAACTCGTCGCAGAGTTGATCGTTGTAAATGGATTCAAAGCTACTTTTGCAATTAAAGATGGTGCAGAAGGACCTAGTGGATGGACGAATAGTGGTCTTCCTTGGTTAACACCAAAGTCACCTTTGAGTTTTAGCAGTCTAACAGATGCTATTGCTGGTGTGTTTGGAGAGGATTTCAAGGTTTTCCTGCTTTGTTGCTCTTTTGTGCAATATGTTGATTGTGTGATGGATACAATGGAAAAACAAACAAACAACAATATTTGA

Coding sequence (CDS)

ATGGAGAACGCCCTAGAACCACAAATCTTTGACCTAAAGCGCTGCCACACGGAGTTTCAAGTGCCCGAACGAAATAGAAGCAACATAAAATGTGAGAAAACAAAAGGAACAAATTTACAAAGGAAAGTAGGTAGCCCCGATATTAAAAAGTTGGGCAAAAAGCCTGTGGTTATTACTTACAAAGGTGACGATAAGCCTGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAATATGATGGGAACTCTGAACTCGTCGCAGAGTTGATCGTTGTAAATGGATTCAAAGCTACTTTTGCAATTAAAGATGGTGCAGAAGGACCTAGTGGATGGACGAATAGTGGTCTTCCTTGGTTAACACCAAAGTCACCTTTGAGTTTTAGCAGTCTAACAGATGCTATTGCTGGTGTGTTTGGAGAGGATTTCAAGGTTTTCCTGCTTTGTTGCTCTTTTGTGCAATATGTTGATTGTGTGATGGATACAATGGAAAAACAAACAAACAACAATATTTGA

Protein sequence

MENALEPQIFDLKRCHTEFQVPERNRSNIKCEKTKGTNLQRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVFLLCCSFVQYVDCVMDTMEKQTNNNI
Homology
[Close]
BLAST of Sed0013783 vs. NCBI nr
Match: KAG6597089.1 (Rhodanese-like domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-49
Identity = 100/116 (86.21%), Postives = 104/116 (89.66%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL
Sbjct: 597 RKVGSPDIQKLGKKPVSIPYKGEDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 656

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 657 VTVNGFKAAFAIKDGVEGPRGWTNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 712

[Close]
BLAST of Sed0013783 vs. NCBI nr
Match: XP_023539567.1 (rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-49
Identity = 100/116 (86.21%), Postives = 104/116 (89.66%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL
Sbjct: 168 RKVGSPDIQKLGKKPVSIPYKGEDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 227

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 228 VTVNGFKAAFAIKDGVEGPRGWTNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 283

[Close]
BLAST of Sed0013783 vs. NCBI nr
Match: XP_023539430.1 (rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-49
Identity = 100/116 (86.21%), Postives = 104/116 (89.66%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL
Sbjct: 56  RKVGSPDIQKLGKKPVSIPYKGEDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 115

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 116 VTVNGFKAAFAIKDGVEGPRGWTNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 171

[Close]
BLAST of Sed0013783 vs. NCBI nr
Match: XP_022974654.1 (rhodanese-like domain-containing protein 4, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 205.3 bits (521), Expect = 4.5e-49
Identity = 99/116 (85.34%), Postives = 104/116 (89.66%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL
Sbjct: 168 RKVGSPDIQKLGKKPVSIPYKGEDKPGFLKKLALKFKEPQNTTLFILDKYDGSSELVAEL 227

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 228 VTVNGFKAAFAIKDGVEGPRGWTNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 283

[Close]
BLAST of Sed0013783 vs. NCBI nr
Match: XP_022974944.1 (rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 205.3 bits (521), Expect = 4.5e-49
Identity = 99/116 (85.34%), Postives = 104/116 (89.66%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL
Sbjct: 168 RKVGSPDIQKLGKKPVSIPYKGEDKPGFLKKLALKFKEPQNTTLFILDKYDGSSELVAEL 227

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 228 VTVNGFKAAFAIKDGVEGPRGWTNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 283

[Close]
BLAST of Sed0013783 vs. ExPASy Swiss-Prot
Match: Q9M158 (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4 PE=1 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-41
Identity = 81/113 (71.68%), Postives = 96/113 (84.96%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           R+VGSP+IK LGKK V   Y G+DKPGFLKKL+LKFK+P+NTTL+ILDK+DGNSELVAEL
Sbjct: 160 RQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFDGNSELVAEL 219

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLS--FSSLTDAIAGVFGE 152
           + +NGFK+ +AIKDGAEGP GW NS LPW+ PK  LS   SSLTD+I+GVFGE
Sbjct: 220 VALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTLSLDLSSLTDSISGVFGE 272

[Close]
BLAST of Sed0013783 vs. ExPASy Swiss-Prot
Match: A2X345 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=TROL PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.4e-31
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           R+ G+PD+++  KK   + Y G+DK GFLKKL+L+FK+P+NTTL ILDK+DGNSELVAEL
Sbjct: 156 RQSGAPDLREAKKKAAAVPYDGEDKNGFLKKLSLRFKDPENTTLVILDKFDGNSELVAEL 215

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSL 142
           +  NG+KA FA+KDGAEG  GW +S LPW  PK   S S L
Sbjct: 216 VTANGYKAAFAVKDGAEGRRGWLSSSLPWTAPKKGFSLSDL 256

[Close]
BLAST of Sed0013783 vs. ExPASy Swiss-Prot
Match: Q6ETQ7 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TROL PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.4e-31
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           R+ G+PD+++  KK   + Y G+DK GFLKKL+L+FK+P+NTTL ILDK+DGNSELVAEL
Sbjct: 158 RQSGAPDLREAKKKAAAVPYDGEDKNGFLKKLSLRFKDPENTTLVILDKFDGNSELVAEL 217

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSL 142
           +  NG+KA FA+KDGAEG  GW +S LPW  PK   S S L
Sbjct: 218 VTANGYKAAFAVKDGAEGRRGWLSSSLPWTAPKKGFSLSDL 258

[Close]
BLAST of Sed0013783 vs. ExPASy Swiss-Prot
Match: Q56XR7 (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4A PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.3e-14
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 24  RNRSNIKCEKTKGTNLQRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTT 83
           +N S+ +    +       + SP++K LGK  V + +  +D+ GFL K+   F + +NT 
Sbjct: 131 KNESDSQLLDIRDVKTLALLASPNLKFLGKSSVQVPFSENDEEGFLTKVKGSFSDAENTV 190

Query: 84  LFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGW 123
           + +LD +DGNS  VAEL++ NGFK  + I+ GA G +GW
Sbjct: 191 VCVLDNFDGNSSKVAELLIKNGFKEAYYIRGGARGKNGW 229

[Close]
BLAST of Sed0013783 vs. ExPASy TrEMBL
Match: A0A6J1IJ07 (rhodanese-like domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473769 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49
Identity = 99/116 (85.34%), Postives = 104/116 (89.66%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL
Sbjct: 168 RKVGSPDIQKLGKKPVSIPYKGEDKPGFLKKLALKFKEPQNTTLFILDKYDGSSELVAEL 227

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 228 VTVNGFKAAFAIKDGVEGPRGWTNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 283

[Close]
BLAST of Sed0013783 vs. ExPASy TrEMBL
Match: A0A6J1II89 (rhodanese-like domain-containing protein 4, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473338 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49
Identity = 99/116 (85.34%), Postives = 104/116 (89.66%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL
Sbjct: 168 RKVGSPDIQKLGKKPVSIPYKGEDKPGFLKKLALKFKEPQNTTLFILDKYDGSSELVAEL 227

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 228 VTVNGFKAAFAIKDGVEGPRGWTNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 283

[Close]
BLAST of Sed0013783 vs. ExPASy TrEMBL
Match: A0A6J1FCG4 (rhodanese-like domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442748 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.8e-49
Identity = 99/116 (85.34%), Postives = 103/116 (88.79%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPG LKKLALKFKEPQNTTLFILDKYDGNSELVAEL
Sbjct: 168 RKVGSPDIQKLGKKPVSIPYKGEDKPGLLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 227

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 228 VTVNGFKAAFAIKDGVEGPRGWTNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 283

[Close]
BLAST of Sed0013783 vs. ExPASy TrEMBL
Match: A0A6J1IEI2 (rhodanese-like domain-containing protein 4, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473338 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-48
Identity = 98/116 (84.48%), Postives = 103/116 (88.79%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL
Sbjct: 168 RKVGSPDIQKLGKKPVSIPYKGEDKPGFLKKLALKFKEPQNTTLFILDKYDGSSELVAEL 227

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVF 157
           + VNGFKA FAIKDG EGP GW NSGLPWLTPKSPLS  SLTDAIAG  GED + F
Sbjct: 228 VTVNGFKAAFAIKDGVEGPRGWQNSGLPWLTPKSPLSIGSLTDAIAGALGEDSEDF 283

[Close]
BLAST of Sed0013783 vs. ExPASy TrEMBL
Match: A0A0A0L8L6 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119690 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.4e-48
Identity = 97/112 (86.61%), Postives = 102/112 (91.07%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           RKVG+PD+K LGKKPV ITYKG+DKPGFLKKL LKFKEPQNTTLFILDKYDG+SELVAEL
Sbjct: 168 RKVGAPDLKGLGKKPVSITYKGEDKPGFLKKLGLKFKEPQNTTLFILDKYDGSSELVAEL 227

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGED 153
           + VNGFKA FAIKDGAEGP GWTNSGLPWLTPK  LS SSLTDAIAG FGED
Sbjct: 228 VTVNGFKAAFAIKDGAEGPRGWTNSGLPWLTPKPGLSLSSLTDAIAGAFGED 279

[Close]
BLAST of Sed0013783 vs. TAIR 10
Match: AT4G01050.1 (thylakoid rhodanese-like )

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-42
Identity = 81/113 (71.68%), Postives = 96/113 (84.96%), Query Frame = 0 

Query: 41  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL 100
           R+VGSP+IK LGKK V   Y G+DKPGFLKKL+LKFK+P+NTTL+ILDK+DGNSELVAEL
Sbjct: 160 RQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFDGNSELVAEL 219

Query: 101 IVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLS--FSSLTDAIAGVFGE 152
           + +NGFK+ +AIKDGAEGP GW NS LPW+ PK  LS   SSLTD+I+GVFGE
Sbjct: 220 VALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTLSLDLSSLTDSISGVFGE 272

[Close]
BLAST of Sed0013783 vs. TAIR 10
Match: AT3G25480.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-15
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 24  RNRSNIKCEKTKGTNLQRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTT 83
           +N S+ +    +       + SP++K LGK  V + +  +D+ GFL K+   F + +NT 
Sbjct: 131 KNESDSQLLDIRDVKTLALLASPNLKFLGKSSVQVPFSENDEEGFLTKVKGSFSDAENTV 190

Query: 84  LFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGW 123
           + +LD +DGNS  VAEL++ NGFK  + I+ GA G +GW
Sbjct: 191 VCVLDNFDGNSSKVAELLIKNGFKEAYYIRGGARGKNGW 229

The following BLAST results are available for this feature:
BLAST of Sed0013783 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6597089.11.2e-4986.21Rhodanese-like domain-containing protein 4, chloroplastic, partial [Cucurbita ar... [more]
XP_023539567.11.2e-4986.21rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp.... [more]
XP_023539430.11.2e-4986.21rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp.... [more]
XP_022974654.14.5e-4985.34rhodanese-like domain-containing protein 4, chloroplastic isoform X1 [Cucurbita ... [more]
XP_022974944.14.5e-4985.34rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita maxima][more]
BLAST of Sed0013783 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M1581.6e-4171.68Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thalian... [more]
A2X3454.4e-3160.40Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX... [more]
Q6ETQ74.4e-3160.40Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica ... [more]
Q56XR76.3e-1437.37Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thalia... [more]
BLAST of Sed0013783 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IJ072.2e-4985.34rhodanese-like domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX... [more]
A0A6J1II892.2e-4985.34rhodanese-like domain-containing protein 4, chloroplastic isoform X1 OS=Cucurbit... [more]
A0A6J1FCG42.8e-4985.34rhodanese-like domain-containing protein 4, chloroplastic OS=Cucurbita moschata ... [more]
A0A6J1IEI21.1e-4884.48rhodanese-like domain-containing protein 4, chloroplastic isoform X2 OS=Cucurbit... [more]
A0A0A0L8L61.4e-4886.61Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119690 P... [more]
BLAST of Sed0013783 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G01050.11.1e-4271.68thylakoid rhodanese-like [more]
AT3G25480.14.5e-1537.37Rhodanese/Cell cycle control phosphatase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 37..141
e-value: 1.4E-24
score: 88.4
IPR044240Rhodanese-like domain-containing protein STR4-likePANTHERPTHR47377RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTICcoord: 39..156
NoneNo IPR availablePANTHERPTHR47377:SF1RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTICcoord: 39..156

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0013783.1Sed0013783.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008061 chitin binding
molecular_function GO:0016787 hydrolase activity