Sed0013760 (gene) Chayote v1

Overview


Name	Sed0013760
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ATP synthase subunit delta', mitochondrial-like
Location	LG02: 51103241 .. 51107072 (-)
RNA-Seq Expression	Sed0013760
Synteny	Sed0013760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATCGTTGTAGCAAATTCCTCCATTTTCTCAGCTTCCAAACAGCACAAAGCGGTCTCCGACCTTGCGAGAGCCGAGCGACCCACCACCCTGTCTCCGCCATGTTCCGACGAGCTTCATGCCTTCTGGCCCGTCCTCTCCTCTCCGGCCGGGCCAGATCCTTCTCCGCCGATCTGCCGGCGGCTCCGGTAACCGACGATGCCTTCGTCGCCGCCTGGAAGAAGACGATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCCGCTACGCCTACTTCCATCCCTACTAAGCTCACTGTCAACTTCGTTCTTCCTTATGCCTCAGAGCTCTCCGCCAAACAGGTTCGTGTTTGGGAATTTGTTTTGCATTTTCAGGTGTTGAATCTTGTTCGTGATTGTGAATTTGTTCTGCGTTTTTTTGTGTTTGAATTGGCTCTTGGATGACGTTTTGCGCGCTGATTTTGATTTAAGATTATGACTCCTTGATCGCTTTGAATCTTCGTAATAATTTGAAATTTGCTTTGCCTGGTCAACTCTTTGTGTGTTTCAGGTGTTGAATCTTGTTCGTGATTATGAATTTTTGCTGCATTTGATTGTTTTAGAATTGGTTCTTGGATTAACAATTTGTGTGCCGATTTTGATGTAAAATTATGACTCCTTGATTGCTTTGAATCTTCGTAATAATTGGGATCCAATGTTAAGGGTTCATAATTGACGTGAAATACGTATTTCTATTACGCGGGTACAAATGCTTAACTGGAAATGGATTATATAGGAAGCCTGTTTATGCATTGATTACTCTCAATATAGAATATGAATTCCTCGCAGTTAATAGATTTGATTTCTTGTTCTATTTTTGTTTTGAATTTGATATATGGCATTCGTGTCCATATGCTATCTGATCGCATGGGAGGATGTTTGGCGTATACTCGGATCAGATTATATACACTTTGTGAGCTTGATATTTGGCATTAGGGTCAAGAAGTATCTAAATTGTTGTTAAAATAAAGTACCAAGAACTGCTAATCTGCTTATCTGGTATCTTAGGCTTGTAGTGTCCAATGCTGTTATATCAGCAATGTTATAAATTAGAACAAGCTCTGATGATTAATTAAGGTAACGTTTCATGCATCAATTCATGTGATCGTCAATTCTTCATAAAGTTGATGTTTCTTTTCGGTTTGCTCATTCAAAATCCGCTACTGTCCTCTTTTACCAGTGGCTGATTTTAAATCCGAGGTCAGTTCTTTGGTGCTTCCTTCAACAACACCATTCTCTTTAGTATTAGACATTTTCCAATTTTTCCTTAAAGATTCTTTTGTTTATTCCTGTATACACAACACCCAACCTCAATAAGTAGTAAGTAGTTGGTTATTCCTGTGTCACTTAGGGAGGTGTTTGGAAGAGGTTTTGGATGAGGAGTTAGTTTGAGGAGTTATTTTGAGGAGTTAGAAATTGAGACTTTCTGCCAAAAACTTGTTTGGATGTGGTTTTTTTTTTGTAGAAGAGTAAGAGAAAATAGCTTGTTTGGATGTGGATTTGAAATGAGTAGTAATTTTGAGTTCTTAAAAAAGAATGATTAAAAGTCCCCAAGGGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAGTGTATGCTCTCCTCAAGATCCTAGGTTCGAGACTCGTCTGTGACACTACTTCTTCGATGTCTCTGGTGTCTGGCCTAGGGACGGGTGTGATCACCTTGTTTCAAAAAAAAGAATGATTAAAAACGAGTTATTTTGAGTAGTTTGAAATGAATGATTAGAAATGTGCTGTTAGAAATGAGGAGCTATTTTATAAGTTTTTTTTACTAGTTACTCGTTTGGATGTAGTTTTTAGTAGTTAGTAAATACTCATTTTAAATTCAACATACAAATACCCCCTTGGTGTCTCTTTCACTACACTACATTTACACCATTGTCCTATTGCTGCCTCCTAGGAAGCACAGACACTTCTAGTTTGACAAAGTATCCGTGTCGTACTCGTGTCCGACACCGATACTTCCGGACACTCGTCGGACACGTGTCCAACACTCAAAATTCTGTGTCCTTTTTTATTATTATTATTTTCAATTTTGGACACTTCACGGACACACCATGGACACTTCATGGACACCTCAATTAAGACTTATTTGTTTTCAATGACGGATGACATGACAACGGGAATTGTTGGTGGAGGCCGTGGACGACGATGTCTATCGAAGATAGATGCACTAAAATGGAAAAAGGAAAGAAAGAGAGAAAATAGAATAGAGGGAAGGAAAATGAGATAAAAACTAAATATTTAAAAATTGTTATGGGTAGGTTTACAACTAACTAAAATATTTTGGATTTCATCTTTTAATAGTATATTATAAAAAATAATAATAAATCACGTGTCCTCGACGTATCCGTATCCTGCATTTTTAAATAATGGCGTTTCTACGTATCCGTGTCGTGCCGTGTCCGTATCTCGTGTCCGTGTCCGTGCTTCTTAGGCTGCCTCAGGTTTACCTTCTTTTATAATTTCATACACTTTTGTATATAAGTGATTATTCGGGCCACCTTACATGCAACTTGACTATTATCACAGAACAACCCCCTTGACCCTTCGACATTTGAATGTCAAGGAACTTCGTAAGAACTTAATTCCTAGGTAGGTAACCACCAAACCCACAACCTTTTGGTTCTCCAAGTTCCTTTCGACCACTAGGCCAATCCATGGTCTTTTGTAATTGTTCATTTCTTATTAGAAAATAAAAACCATTCAATAAGTAGTGAATGCTACATCTAAATTTTGATGAAACAAAAATGAAAAGTATATTTTTGTTAACTCAGGATGTTAGAAGTTACTCGAAGTTTCCTTGTTTATTACGAATATTGTCTGCATTTTCTTTAGATAGAATATTGTCTGGATTGATTCCATGTATTCTTCATTTCATTTCTCTTCTCCAACTGATGGGGGGAGGCAGTACTTTTTCTCAAATTGAAGTTGAATTGTTGTATTCAGTATAACTGCCAGAAACACACACAAATAAATTCTAAAGGGTTTGGTTGTACACTTGGGAAGGACTAAAGCATAAGTGTTTTGGGCTCATTAACACTGTATCTCAGACATGCTGTGGTTAAAGGTGCAATTTGCAAAGTAACCCAAAATTTGAAGTCTTGTTTAAAGTTATTTTCTGTTCCCCTCATTCTGAACAGGTTGACATGGTAATAATTCCAGCAACAACTGGGCAAATGGGAGTTCTTCCAGGTCATGTAGCTACAATTGCAGAGTTGAAGCCAGGAGTTCTATCGGTGCACGAAGAAGGCGAAACCAAAAAGTACTTCGTGAGCAGCGGTTTTGCATTCATCCATGGGAACTCGTATGCTGACATTATCGCTGTCGAAGCTGTGCCTGTAGACCAAATTGACGCCAGCCAAGTACAAAAGGGTCTTGCTGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGATTTGGAGAAAGCCGAAGCCCAAATCGGAGTCGAGGTGCACAGTGCCCTGAATGCTGCCCTTACAGGATAGTTTCTCGGCTTGCAAATCGGCCACTCTTTGGTTTATGTATTTCCTATGGTATGTTCCTTCATAACACTGCCTAATTGACACTTTCTGTTATCTTCTGTTCATCTTGGGCTTACCTTTTCTGTATTGAATTTGAAATGATTCACAAATAAAAATGGTAGGATGGGTTTTTGCTTGGACTTGTAGTAGTTCATAATCTAGTGGCAGCTTCTACATCACAAACAAACACAGAAGAATTCGATTGACAGAATCAAATTTATATTTGTCTT

mRNA sequence

CAAAATCGTTGTAGCAAATTCCTCCATTTTCTCAGCTTCCAAACAGCACAAAGCGGTCTCCGACCTTGCGAGAGCCGAGCGACCCACCACCCTGTCTCCGCCATGTTCCGACGAGCTTCATGCCTTCTGGCCCGTCCTCTCCTCTCCGGCCGGGCCAGATCCTTCTCCGCCGATCTGCCGGCGGCTCCGGTAACCGACGATGCCTTCGTCGCCGCCTGGAAGAAGACGATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCCGCTACGCCTACTTCCATCCCTACTAAGCTCACTGTCAACTTCGTTCTTCCTTATGCCTCAGAGCTCTCCGCCAAACAGGTTGACATGGTAATAATTCCAGCAACAACTGGGCAAATGGGAGTTCTTCCAGGTCATGTAGCTACAATTGCAGAGTTGAAGCCAGGAGTTCTATCGGTGCACGAAGAAGGCGAAACCAAAAAGTACTTCGTGAGCAGCGGTTTTGCATTCATCCATGGGAACTCGTATGCTGACATTATCGCTGTCGAAGCTGTGCCTGTAGACCAAATTGACGCCAGCCAAGTACAAAAGGGTCTTGCTGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGATTTGGAGAAAGCCGAAGCCCAAATCGGAGTCGAGGTGCACAGTGCCCTGAATGCTGCCCTTACAGGATAGTTTCTCGGCTTGCAAATCGGCCACTCTTTGGTTTATGTATTTCCTATGGTATGTTCCTTCATAACACTGCCTAATTGACACTTTCTGTTATCTTCTGTTCATCTTGGGCTTACCTTTTCTGTATTGAATTTGAAATGATTCACAAATAAAAATGGTAGGATGGGTTTTTGCTTGGACTTGTAGTAGTTCATAATCTAGTGGCAGCTTCTACATCACAAACAAACACAGAAGAATTCGATTGACAGAATCAAATTTATATTTGTCTT

Coding sequence (CDS)

ATGTTCCGACGAGCTTCATGCCTTCTGGCCCGTCCTCTCCTCTCCGGCCGGGCCAGATCCTTCTCCGCCGATCTGCCGGCGGCTCCGGTAACCGACGATGCCTTCGTCGCCGCCTGGAAGAAGACGATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCCGCTACGCCTACTTCCATCCCTACTAAGCTCACTGTCAACTTCGTTCTTCCTTATGCCTCAGAGCTCTCCGCCAAACAGGTTGACATGGTAATAATTCCAGCAACAACTGGGCAAATGGGAGTTCTTCCAGGTCATGTAGCTACAATTGCAGAGTTGAAGCCAGGAGTTCTATCGGTGCACGAAGAAGGCGAAACCAAAAAGTACTTCGTGAGCAGCGGTTTTGCATTCATCCATGGGAACTCGTATGCTGACATTATCGCTGTCGAAGCTGTGCCTGTAGACCAAATTGACGCCAGCCAAGTACAAAAGGGTCTTGCTGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGATTTGGAGAAAGCCGAAGCCCAAATCGGAGTCGAGGTGCACAGTGCCCTGAATGCTGCCCTTACAGGATAG

Protein sequence

MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRPATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVEVHSALNAALTG

Homology

[Close]

BLAST of Sed0013760 vs. NCBI nr
Match: XP_023540281.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.3 bits (900), Expect = 5.6e-93
Identity = 185/200 (92.50%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LL RPLLS RARSFSADLPAA  TDDAFVAAWKK IP IDPPKTPLSFMAPRP
Sbjct: 1   MFRRASSLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPKTPLSFMAPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIPTKLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of Sed0013760 vs. NCBI nr
Match: XP_022974765.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 5.6e-93
Identity = 185/200 (92.50%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LL RPLLS RARSFSADLPAA  TDDAFVAAWKK IP IDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPKTPLSFMAPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIPTKLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of Sed0013760 vs. NCBI nr
Match: KAG7028721.1 (hypothetical protein SDJN02_09902, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 184/200 (92.00%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LL RPLLS RARSFSADLPAA  TDDAFVAAWKK IP IDPP+TPLSFMAPRP
Sbjct: 35  MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLSFMAPRP 94

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIPTKLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 95  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 154

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 155 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 214

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 215 KAEAQIGVDVHSALNAALTG 234

[Close]

BLAST of Sed0013760 vs. NCBI nr
Match: KAG6597252.1 (hypothetical protein SDJN03_10432, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 184/200 (92.00%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LL RPLLS RARSFSADLPAA  TDDAFVAAWKK IP IDPP+TPLSFMAPRP
Sbjct: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLSFMAPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIPTKLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of Sed0013760 vs. NCBI nr
Match: XP_022975239.1 (ATP synthase subunit delta', mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022975240.1 ATP synthase subunit delta', mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 184/200 (92.00%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LL RPLL+ RARSFSADLPAA  TDDAFVAAWKK IP IDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLTRPLLTARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPKTPLSFMAPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIPTKLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of Sed0013760 vs. ExPASy Swiss-Prot
Match: Q40089 (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 8.6e-81
Identity = 155/200 (77.50%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFR +S LLAR    G  R FS DLPA    D  FV AWKK IPN+DPPKTP ++MAPRP
Sbjct: 1   MFRHSSRLLARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIP+KLTVNFVLPY+SEL+ K+VDMVIIPATTGQMGVLPGHVATIAELKPGV+SVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +  KYFVS GFAFIH NS+ADIIAVEAVP+D+IDA+ VQKGLAEFTQKLN+ASTD+E
Sbjct: 121 EGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of Sed0013760 vs. ExPASy Swiss-Prot
Match: Q96252 (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.9e-73
Identity = 145/205 (70.73%), Postives = 171/205 (83.41%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRA-----RSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSF 60
           MF++AS LL+R + +  +     R+FS +LP+    D  FV AWKK  PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPS--TLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPG 120
           M PRP+TP+SIPTKLTVNFVLPY SEL+ K+VDMVIIPA+TGQMGVLPGHV TIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSA 180
           ++SVHE  + KKYF+SSGFAF+H NS ADIIAVEAVP+D ID SQVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVEVHSALNAALTG 201
           +TDLEKAEAQIGVEVHSA+NAAL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

[Close]

BLAST of Sed0013760 vs. ExPASy Swiss-Prot
Match: Q41000 (ATP synthase subunit delta', mitochondrial OS=Pisum sativum OX=3888 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.6e-69
Identity = 142/201 (70.65%), Postives = 164/201 (81.59%), Query Frame = 0


Query: 1   MFRRA-SCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPR 60
           MFRRA S  L+R   +   R FS D+ A P T+ +FV AW+K  PNIDPPKTPL F+  R
Sbjct: 1   MFRRATSTFLSR---ASATRRFSTDV-ATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTR 60

Query: 61  PATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSV 120
           P  P++IPTKLTVNFVLPY+S+L+AK+VD VIIPATTG+MGVLPGHVATIAELKPGVL+V
Sbjct: 61  PPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTV 120

Query: 121 HEEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDL 180
            E  +T KYFVSSGF FIH NS ADIIAVEAVPV+Q+D   VQKGL EFTQKLNSA+TDL
Sbjct: 121 QEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDL 180

Query: 181 EKAEAQIGVEVHSALNAALTG 201
           EK EAQIG++V SALN+ALTG
Sbjct: 181 EKREAQIGIDVDSALNSALTG 197

[Close]

BLAST of Sed0013760 vs. ExPASy Swiss-Prot
Match: Q55F42 (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=atp5f1d PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.7e-21
Identity = 52/126 (41.27%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 70  LTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSV-HEEGETKKY 129
           LT + + P+ +    K+  +V +P   G  GV   HV  IAELKPGV+ + HE G+ +K+
Sbjct: 37  LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKF 96

Query: 130 FVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGV 189
           F+S GFAF++ ++   I  +EAVP+DQ+DA +V+ GLA +TQ  N A  +  KA A IG+
Sbjct: 97  FISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVALIGL 156

Query: 190 EVHSAL 195
           E +  +
Sbjct: 157 ETYQQM 162

[Close]

BLAST of Sed0013760 vs. ExPASy Swiss-Prot
Match: Q92196 (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus OX=5341 GN=atpD PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.0e-18
Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 66  IPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEEGET 125
           I  KL ++  LP+ +  S++ V  V IPA +G MG+L  HV +I  L+PGV+ V E+  +
Sbjct: 28  ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGS 87

Query: 126 KKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQ 185
           +K+FVS GFA +H N+   I  VEA P++      ++  L E  +    + ++ +K EAQ
Sbjct: 88  QKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKMEAQ 147

Query: 186 IGVEVHSALNAAL 199
           I  EV+ AL  AL
Sbjct: 148 IEAEVYEALQHAL 160

[Close]

BLAST of Sed0013760 vs. ExPASy TrEMBL
Match: A0A6J1IET0 (ATP synthase subunit delta', mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111473489 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 185/200 (92.50%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LL RPLLS RARSFSADLPAA  TDDAFVAAWKK IP IDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPKTPLSFMAPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIPTKLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of Sed0013760 vs. ExPASy TrEMBL
Match: A0A6J1IG70 (ATP synthase subunit delta', mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474353 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.0e-93
Identity = 184/200 (92.00%), Postives = 189/200 (94.50%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LL RPLL+ RARSFSADLPAA  TDDAFVAAWKK IP IDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLTRPLLTARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPKTPLSFMAPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIPTKLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of Sed0013760 vs. ExPASy TrEMBL
Match: A0A6J1ITJ7 (ATP synthase subunit delta', mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479794 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.3e-92
Identity = 181/200 (90.50%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LLAR L S R RSFSADLPAAP TDDAFVAAWKK IPNIDPPKTPLSFM+PRP
Sbjct: 1   MFRRASSLLARSLFSARTRSFSADLPAAPSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIP+KLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGF FIHGNSYADIIAVEAVPV+QIDASQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGNDTKKYFVSSGFTFIHGNSYADIIAVEAVPVEQIDASQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIG++VHSALNAA+TG
Sbjct: 181 KAEAQIGIDVHSALNAAITG 200

[Close]

BLAST of Sed0013760 vs. ExPASy TrEMBL
Match: A0A6J1FCD5 (ATP synthase subunit delta', mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111442814 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92
Identity = 183/200 (91.50%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LL RPLLS RARSFSADLPAA  TDDAFVAAWKK IP IDPP+TPL FMAPRP
Sbjct: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIPTKLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIGV+VHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]

BLAST of Sed0013760 vs. ExPASy TrEMBL
Match: A0A6J1E9L4 (ATP synthase subunit delta', mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111432026 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 179/200 (89.50%), Postives = 188/200 (94.00%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRARSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSFMAPRP 60
           MFRRAS LLAR   S R RSFSADLPAA  TDDAFVAAWKK IPNIDPPKTPLSFM+PRP
Sbjct: 1   MFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRP 60

Query: 61  ATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATP+SIP+KLTVNFVLPYASELSAK+VDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 180
           E  +TKKYFVSSGFAFIHGNSYADIIAVEAVPV+QID SQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDTSQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVEVHSALNAALTG 201
           KAEAQIG++VHSALNAA+TG
Sbjct: 181 KAEAQIGIDVHSALNAAITG 200

[Close]

BLAST of Sed0013760 vs. TAIR 10
Match: AT5G47030.1 (ATPase, F1 complex, delta/epsilon subunit )

HSP 1 Score: 275.8 bits (704), Expect = 2.8e-74
Identity = 145/205 (70.73%), Postives = 171/205 (83.41%), Query Frame = 0


Query: 1   MFRRASCLLARPLLSGRA-----RSFSADLPAAPVTDDAFVAAWKKTIPNIDPPKTPLSF 60
           MF++AS LL+R + +  +     R+FS +LP+    D  FV AWKK  PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPS--TLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPTSIPTKLTVNFVLPYASELSAKQVDMVIIPATTGQMGVLPGHVATIAELKPG 120
           M PRP+TP+SIPTKLTVNFVLPY SEL+ K+VDMVIIPA+TGQMGVLPGHV TIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEEGETKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSA 180
           ++SVHE  + KKYF+SSGFAF+H NS ADIIAVEAVP+D ID SQVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVEVHSALNAALTG 201
           +TDLEKAEAQIGVEVHSA+NAAL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

The following BLAST results are available for this feature:

BLAST of Sed0013760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540281.1	5.6e-93	92.50	ATP synthase subunit delta', mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974765.1	5.6e-93	92.50	ATP synthase subunit delta', mitochondrial-like [Cucurbita maxima]	[more]
KAG7028721.1	1.2e-92	92.00	hypothetical protein SDJN02_09902, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6597252.1	1.2e-92	92.00	hypothetical protein SDJN03_10432, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022975239.1	1.2e-92	92.00	ATP synthase subunit delta', mitochondrial-like isoform X1 [Cucurbita maxima] >X...	[more]

BLAST of Sed0013760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40089	8.6e-81	77.50	ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1	[more]
Q96252	3.9e-73	70.73	ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q41000	7.6e-69	70.65	ATP synthase subunit delta', mitochondrial OS=Pisum sativum OX=3888 PE=3 SV=1	[more]
Q55F42	7.7e-21	41.27	ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum OX=44689 G...	[more]
Q92196	8.0e-18	38.35	ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus OX=5341 GN=atpD P...	[more]

BLAST of Sed0013760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IET0	2.7e-93	92.50	ATP synthase subunit delta', mitochondrial-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IG70	6.0e-93	92.00	ATP synthase subunit delta', mitochondrial-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1ITJ7	2.3e-92	90.50	ATP synthase subunit delta', mitochondrial-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FCD5	3.0e-92	91.50	ATP synthase subunit delta', mitochondrial-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E9L4	1.2e-90	89.50	ATP synthase subunit delta', mitochondrial-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Sed0013760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47030.1	2.8e-74	70.73	ATPase, F1 complex, delta/epsilon subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..185
None	No IPR available	GENE3D	1.20.5.440		coord: 157..199 e-value: 5.2E-9 score: 37.8
None	No IPR available	PANTHER	PTHR13822:SF20	ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL	coord: 1..200
IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal	GENE3D	2.60.15.10		coord: 58..156 e-value: 6.0E-27 score: 95.6
IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal	SUPERFAMILY	51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain	coord: 70..151
IPR020546	ATP synthase, F1 complex, delta/epsilon subunit, N-terminal	PFAM	PF02823	ATP-synt_DE_N	coord: 70..141 e-value: 2.4E-17 score: 62.6
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	TIGRFAM	TIGR01216	TIGR01216	coord: 83..186 e-value: 6.3E-20 score: 69.5
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	PANTHER	PTHR13822	ATP SYNTHASE DELTA/EPSILON CHAIN	coord: 1..200
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	HAMAP	MF_00530	ATP_synth_epsil_bac	coord: 68..188 score: 15.057926
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	CDD	cd12152	F1-ATPase_delta	coord: 70..193 e-value: 1.86319E-37 score: 124.546

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013760.1	Sed0013760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism