Sed0013757 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCGAGAACAGGCGTAGGCGGGAGAAGAGTCGGGTAATACCTGCTGCCAAACAGGCGGCCTCCGGATGGTTAAGGATTAGAGAGAGAGAGGTGGTGAAATAAAGAAGAAACACATTATCGAGAATTGGGTTGCCAATTGCCATGGGGGTGGGGTTCATTAGCAGCTCTCACATGCGCCTTCCCCTTCACTCTCTGTTCCATCAAAACCAGCGCCCGCCATTGTTACCCACCTTCAAACCTTCTTCTTCTTCTGGTTGTTGCGTCGTTGTGTGCTCAACGGACACCGATTCGCAGCAGTTTGAGGTCGATCCAGACAAGGCCAGGCAGGCGCTTCAAGACCTTGATCAGCACCTTCAATCCTTCTCCACCAAACCAGTTTCTCCTCCTAGAAAAAAAGGTATAACCGCCCCTCCACTTTTCAACCCTAATTCTCACTCCAATTTTGAACCATTCAATACTGTTTTACTTTAACACATGGATGTGGCTTACACCCCGTTTGATAACCATTTTATTTTTCGTTTTTTGTTTATCAAATTTAGCCATGTAACAACTACCTTACTATACATTTTTCCTCATTGGATATCTACATCTTACTTATTTTTTAATAACCAAAACCAAAATTTGTAAACAAGAAAAAATAGCTTCCTAAAGCTTGTTTTGGTTTTTAAATTTGGTTAGTATTCACCTACTTTATTAAGGAAATGTGGATACATAGTATGAAAGATGGACCTCATGGTAGGAAATTTGAGTAGAAATAAGCTTAAATTTCATAAATAAAAAACAAAAAACCAAGGCCCCGTTTGATAACCATTTTGTTTTTTGTTTTTTGTTTATGAAATTTAAGCCTATTTCTATTCAAATTTCCTACCATGTGCTCTATCTTTCCTACAATGTATTCATCTTTCCTTAAGAAAGTAGGAGAATACTAACCAAATTTAAAAAATTTAAACAAGTTTTTGGAAGCTACTTTTTTTTGTTTACAAATTTTGATTTTATTTATTAAAATATAGGTAAATGGTAGATATCCAAATAAGAAAAAAACTATACTAAGGTAGTTGTTGTAAGCTTAAATTTCATAAACAAAAAACAAAAAACAAAATGGTTATCAAATGGGACTCAAATGATTATCAAACTGGGCCTTATTTTTTAGTTTACGAAATCAGTAGAAATATATTGTAATCACAAAGCTCTACCTCGTAGTCATCGTAGTGCTTCTGATCATGTTAAATCATTACTCAATCTAAAATTTTAAGGTCCTTGTCTCATAACTATTTGGTAGGTCATGAGTGTTTTCAAAATTGTGTTCATTTGAGAAAACTTTTGATTTCAAAAATAAAAACTTGTTTCTTACAAATATTTATTAACTTGGCTTCGTTGTTCAAAATATAGAGAGAGTAGATAACAAAGCAAGGAAATTAACAAAGGAACTAGTAAGAAAAGAGGGCATTGGAAAACCAAAAAGCTATGAGTTCGATTCATTATGCTCAATTAGGTACCAATTTTGTTTACATCCAAATATTGTAAGGTCAAGTCGATAAGAATTGTCGATGTGTGCTTAAATTTGCTCAGATACTTATATATAAAAAAATAAAGTACTAAATAATTATAAATGGGGTCTATGAGTTATGGTAAATTTAATCTTATATAAGAAACGAGCGAGCACTTTAAGAGAAGTGTTTCTTTTTCAGATTATTAAAATTAAAGATTGTTTCATAAGAATAATCAAGGTGCGCATAAGTTGATGTGAACACTCATAGATATAGAAATTAAGAAGAAAAAGTACCCTGTTTTAAAAAAAAAAAATTAAGAGTAGAGGTTTTGAACATTATCATTGTGATGTCCCAATTAGACCATGTTTATAGACTGCAAGCTCTCTTGGATTTTGCCAGCTTAGAACTAGTGGGACACTTTTCTTAGGGCAAAGATCATATTGGTTTGGTGCACATTAACTTTTCTTATGCTGATTTGGAGTGGGGTTTGTAACATGGGTGCAGTTCAGGAGATGAAACTTCCAAGAGGTGAAATGAGAGGAGAAATGGCAGAGATTTCAGGGACCCTTTTAGCAAATTCTGCTGCTCTTCTCTTCATCTTCTCCATTTTCTACAATGTGTTGTTTTATACACTCATAAAGCCTTCCATTGATGCTCCACTGCCAACTTCAATTAGCTCTCTCAGAGATTCTAATTGACCCACCACTTTTGCAGCACTTTCCATCTCTCTTCATATCCCCATCTCTTCTTACCTAATTTCTAAATCTCCAAAAAAAAAAAAAACATATATGATTTTACATATACTTTTCTTTTTGGGGATTTTGCATGTATATCAAAAAATAGCAAAATATTTCCATCTATAGCACAAAATCCAAAATAATTTCATTTGTAGCAGA AGCGAGAACAGGCGTAGGCGGGAGAAGAGTCGGGTAATACCTGCTGCCAAACAGGCGGCCTCCGGATGGTTAAGGATTAGAGAGAGAGAGGTGGTGAAATAAAGAAGAAACACATTATCGAGAATTGGGTTGCCAATTGCCATGGGGGTGGGGTTCATTAGCAGCTCTCACATGCGCCTTCCCCTTCACTCTCTGTTCCATCAAAACCAGCGCCCGCCATTGTTACCCACCTTCAAACCTTCTTCTTCTTCTGGTTGTTGCGTCGTTGTGTGCTCAACGGACACCGATTCGCAGCAGTTTGAGGTCGATCCAGACAAGGCCAGGCAGGCGCTTCAAGACCTTGATCAGCACCTTCAATCCTTCTCCACCAAACCAGTTTCTCCTCCTAGAAAAAAAGTTCAGGAGATGAAACTTCCAAGAGGTGAAATGAGAGGAGAAATGGCAGAGATTTCAGGGACCCTTTTAGCAAATTCTGCTGCTCTTCTCTTCATCTTCTCCATTTTCTACAATGTGTTGTTTTATACACTCATAAAGCCTTCCATTGATGCTCCACTGCCAACTTCAATTAGCTCTCTCAGAGATTCTAATTGACCCACCACTTTTGCAGCACTTTCCATCTCTCTTCATATCCCCATCTCTTCTTACCTAATTTCTAAATCTCCAAAAAAAAAAAAAACATATATGATTTTACATATACTTTTCTTTTTGGGGATTTTGCATGTATATCAAAAAATAGCAAAATATTTCCATCTATAGCACAAAATCCAAAATAATTTCATTTGTAGCAGA ATGGGGGTGGGGTTCATTAGCAGCTCTCACATGCGCCTTCCCCTTCACTCTCTGTTCCATCAAAACCAGCGCCCGCCATTGTTACCCACCTTCAAACCTTCTTCTTCTTCTGGTTGTTGCGTCGTTGTGTGCTCAACGGACACCGATTCGCAGCAGTTTGAGGTCGATCCAGACAAGGCCAGGCAGGCGCTTCAAGACCTTGATCAGCACCTTCAATCCTTCTCCACCAAACCAGTTTCTCCTCCTAGAAAAAAAGTTCAGGAGATGAAACTTCCAAGAGGTGAAATGAGAGGAGAAATGGCAGAGATTTCAGGGACCCTTTTAGCAAATTCTGCTGCTCTTCTCTTCATCTTCTCCATTTTCTACAATGTGTTGTTTTATACACTCATAAAGCCTTCCATTGATGCTCCACTGCCAACTTCAATTAGCTCTCTCAGAGATTCTAATTGA MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFKPSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQEMKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISSLRDSN Homology
BLAST of Sed0013757 vs. NCBI nr
Match: XP_038901592.1 (uncharacterized protein LOC120088397 [Benincasa hispida]) HSP 1 Score: 179.9 bits (455), Expect = 1.6e-41 Identity = 102/153 (66.67%), Postives = 120/153 (78.43%), Query Frame = 0
BLAST of Sed0013757 vs. NCBI nr
Match: KAG7035867.1 (hypothetical protein SDJN02_02666 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 174.9 bits (442), Expect = 5.3e-40 Identity = 103/158 (65.19%), Postives = 117/158 (74.05%), Query Frame = 0
BLAST of Sed0013757 vs. NCBI nr
Match: KAG6605919.1 (hypothetical protein SDJN03_03236, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174.9 bits (442), Expect = 5.3e-40 Identity = 103/158 (65.19%), Postives = 117/158 (74.05%), Query Frame = 0
BLAST of Sed0013757 vs. NCBI nr
Match: XP_022996085.1 (uncharacterized protein LOC111491401 [Cucurbita maxima]) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39 Identity = 102/158 (64.56%), Postives = 116/158 (73.42%), Query Frame = 0
BLAST of Sed0013757 vs. NCBI nr
Match: XP_023533692.1 (uncharacterized protein LOC111795475 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 170.6 bits (431), Expect = 1.0e-38 Identity = 101/158 (63.92%), Postives = 115/158 (72.78%), Query Frame = 0
BLAST of Sed0013757 vs. ExPASy TrEMBL
Match: A0A6J1K5Q9 (uncharacterized protein LOC111491401 OS=Cucurbita maxima OX=3661 GN=LOC111491401 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 9.8e-40 Identity = 102/158 (64.56%), Postives = 116/158 (73.42%), Query Frame = 0
BLAST of Sed0013757 vs. ExPASy TrEMBL
Match: A0A5D3BB07 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001000 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.4e-38 Identity = 94/146 (64.38%), Postives = 109/146 (74.66%), Query Frame = 0
BLAST of Sed0013757 vs. ExPASy TrEMBL
Match: A0A6J1D5V3 (uncharacterized protein LOC111017318 OS=Momordica charantia OX=3673 GN=LOC111017318 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.4e-38 Identity = 95/152 (62.50%), Postives = 113/152 (74.34%), Query Frame = 0
BLAST of Sed0013757 vs. ExPASy TrEMBL
Match: A0A1S3BNA1 (uncharacterized protein LOC103491505 OS=Cucumis melo OX=3656 GN=LOC103491505 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.4e-38 Identity = 94/146 (64.38%), Postives = 109/146 (74.66%), Query Frame = 0
BLAST of Sed0013757 vs. ExPASy TrEMBL
Match: A0A0A0KH36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439950 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 3.5e-37 Identity = 93/146 (63.70%), Postives = 109/146 (74.66%), Query Frame = 0
BLAST of Sed0013757 vs. TAIR 10
Match: AT2G01870.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09 Identity = 37/98 (37.76%), Postives = 60/98 (61.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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