Sed0013748 (gene) Chayote v1

Overview


Name	Sed0013748
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribonuclease T(2)
Location	LG04: 38954882 .. 38955584 (+)
RNA-Seq Expression	Sed0013748
Synteny	Sed0013748

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTTCAACAGTATCCCGAGGCCAGATGTAGTGGTGACAATGTGAATTGCAAACTTCGACCTCCAATTCCGAGTATTTTCACGGTCCACGGTCTGTGGCTGAATGATGTGTCCGGTGCTTCAGTTGTTTGTCCTGGTGTACAGACACCTCTCAAGCCGAAATTTCAGGTTTTAACTTTCTAAACACAATAGAGCTATAATTTTGAAACGATTGGTTCATTCATTTATCATCTATGAACTCCTGTGTTTGTTTGAACTTTTCTCATTGTTTGTTTGTTTTTGTATGGGGGATTGTTTCTTAAGCTTGCTTCAATAACGCAGCAATTGGACACATATTGGCCAAATGTGATAGGTGGGAACAACCAAAAGTTCTGGAGGAAGATCATGGTCGATGTTCTAATTTAAATCAGCTCAATTATTTTCAAACCACCCTAAACTTGTACTCGAATCCCAAGTACAGCTTAACGGTCATCTTGAACTCTTCTGGGTTTGGCTCGGTTCCAAACAAACTCCAACCGAAACTAGGCATCGCAAGTGCCATTGAGGCTGCAACCGGAAAAAAGCCATTCCACACCTTCGCTGCCAGTCTAAATTACATGGACCTCAACTATATGAAATTGGCTTGTCCTTTGAAAAAGACGGCGCCACTCTTATGGACTGTACTCATCATTATGTTCTTCTACTGCTATTACCAAGTTAA

mRNA sequence

ATGTTGGTTCAACAGTATCCCGAGGCCAGATGTAGTGGTGACAATGTGAATTGCAAACTTCGACCTCCAATTCCGAGTATTTTCACGGTCCACGGTCTGTGGCTGAATGATGTGTCCGGTGCTTCAGTTGTTTGTCCTGGTGTACAGACACCTCTCAAGCCGAAATTTCAGCTTGCTTCAATAACGCAGCAATTGGACACATATTGGCCAAATGTGATAGGTGGGAACAACCAAAAGTTCTGGAGGAAGATCATGTACAGCTTAACGGTCATCTTGAACTCTTCTGGGTTTGGCTCGGTTCCAAACAAACTCCAACCGAAACTAGGCATCGCAACCATTCCACACCTTCGCTGCCAGTCTAAATTACATGGACCTCAACTATATGAAATTGGCTTGTCCTTTGAAAAAGACGGCGCCACTCTTATGGACTGTACTCATCATTATGTTCTTCTACTGCTATTACCAAGTTAA

Coding sequence (CDS)

ATGTTGGTTCAACAGTATCCCGAGGCCAGATGTAGTGGTGACAATGTGAATTGCAAACTTCGACCTCCAATTCCGAGTATTTTCACGGTCCACGGTCTGTGGCTGAATGATGTGTCCGGTGCTTCAGTTGTTTGTCCTGGTGTACAGACACCTCTCAAGCCGAAATTTCAGCTTGCTTCAATAACGCAGCAATTGGACACATATTGGCCAAATGTGATAGGTGGGAACAACCAAAAGTTCTGGAGGAAGATCATGTACAGCTTAACGGTCATCTTGAACTCTTCTGGGTTTGGCTCGGTTCCAAACAAACTCCAACCGAAACTAGGCATCGCAACCATTCCACACCTTCGCTGCCAGTCTAAATTACATGGACCTCAACTATATGAAATTGGCTTGTCCTTTGAAAAAGACGGCGCCACTCTTATGGACTGTACTCATCATTATGTTCTTCTACTGCTATTACCAAGTTAA

Protein sequence

MLVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASITQQLDTYWPNVIGGNNQKFWRKIMYSLTVILNSSGFGSVPNKLQPKLGIATIPHLRCQSKLHGPQLYEIGLSFEKDGATLMDCTHHYVLLLLLPS

Homology

[Close]

BLAST of Sed0013748 vs. NCBI nr
Match: XP_038906187.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 120.9 bits (302), Expect = 9.5e-24
Identity = 71/184 (38.59%), Postives = 97/184 (52.72%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+P A CSG  V C+ +P  PS+FT+HGLW ++ S A +VC G+  P  P  Q+A+I
Sbjct: 29  MVQQWPPATCSGVGVRCRAQP--PSMFTIHGLWPSNYSTAHLVCTGL--PFDPT-QIAAI 88

Query: 62  TQQLDTYWPNVIGGNNQKFWR----------------------------KIMYSLTVILN 121
             QL+TYWP+VI GNNQ+FW+                               Y L  ILN
Sbjct: 89  RPQLNTYWPDVIRGNNQRFWQHEWDAHGTCSDPPFNQRQYFQTTLNIRMNHNYDLLAILN 148

Query: 122 SSGFG----------SVPNKLQPKLGIATIPHLRCQSKLH--GPQLYEIGLSFEKDGATL 146
           ++G G          ++ N +Q   G   IP LRC +       QL+EI L F+K+G TL
Sbjct: 149 AAGLGPTATMVRQYQAIENAIQAATG--KIPGLRCNTNAQTGSRQLFEIILCFDKNGVTL 205

[Close]

BLAST of Sed0013748 vs. NCBI nr
Match: XP_022932791.1 (ribonuclease MC-like [Cucurbita moschata])

HSP 1 Score: 109.4 bits (272), Expect = 2.9e-20
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+P A CSG  V C   P  P++FT+HGLW ++ S   +VC G   P  P  Q+A++
Sbjct: 29  MVQQWPPATCSG--VRCYANP--PAMFTIHGLWPSNYSNVPLVCAG--QPFNPA-QIATL 88

Query: 62  TQQLDTYWPNVIGGNNQKFWR----------------------------KIMYSLTVILN 121
             QL+TYWP+VI GNNQ+FW+                               Y L  ILN
Sbjct: 89  VPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQTTLNIRTNHNYDLLAILN 148

Query: 122 SSG----------FGSVPNKLQPKLGIATIPHLRCQSKLHG--PQLYEIGLSFEKDGATL 146
           ++G          +G++   +Q   G    P LRC         QL+EI L F+K+G TL
Sbjct: 149 TAGLGPTATNTRQYGAIEGAIQAATG--KKPGLRCNKNAQSKKKQLFEIILCFDKNGVTL 203

[Close]

BLAST of Sed0013748 vs. NCBI nr
Match: XP_022934593.1 (ribonuclease MC-like [Cucurbita moschata])

HSP 1 Score: 107.8 bits (268), Expect = 8.3e-20
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+P A+CS   V C ++P  P++FT+HGLW ++ S A +VC     P  P  Q+A++
Sbjct: 31  MVQQWPPAKCSSVKVRCHVQP--PTMFTIHGLWPSNYSNARLVC--APQPFNPT-QIAAL 90

Query: 62  TQQLDTYWPNVIGGNNQKFWR----------------------------KIMYSLTVILN 121
             QL+TYWP+VI G NQ+FW+                               Y L  ILN
Sbjct: 91  RPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFNQLQYFQITLNIRTNHSYDLLTILN 150

Query: 122 SSGFGSVPNKLQP--------KLGIATIPHLRC----QSKLHGPQLYEIGLSFEKDGATL 146
           ++G G     ++         +      P LRC    QSK    QL EI L F+KDG TL
Sbjct: 151 AAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSK-EKKQLLEIILCFDKDGITL 208

[Close]

BLAST of Sed0013748 vs. NCBI nr
Match: KAG6581688.1 (hypothetical protein SDJN03_21690, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-18
Identity = 64/184 (34.78%), Postives = 90/184 (48.91%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+P A CSG  V C   P   ++FT+HGLW ++ S   +VC G   P   + Q+A++
Sbjct: 1   MVQQWPPATCSG--VRCYANP--SAMFTIHGLWPSNYSNIPLVCAG--QPFN-RAQIATL 60

Query: 62  TQQLDTYWPNVIGGNNQKFWR----------------------------KIMYSLTVILN 121
             QL+TYWP+VI GNNQ+FW+                               Y L  ILN
Sbjct: 61  VPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQTTLNIRTNHNYDLLAILN 120

Query: 122 SSG----------FGSVPNKLQPKLGIATIPHLRCQSKLHG--PQLYEIGLSFEKDGATL 146
           ++G          +G++   +Q   G    P LRC         QL+EI L F+K+G TL
Sbjct: 121 TAGLGPTGTNTRQYGAIEGAIQAATG--KKPGLRCNKNAQSKKKQLFEIILCFDKNGVTL 175

[Close]

BLAST of Sed0013748 vs. NCBI nr
Match: XP_023514499.1 (ribonuclease MC-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18
Identity = 63/184 (34.24%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+P A CSG  V C   P  P++FT+HGLW ++ S   ++C G   P  P     ++
Sbjct: 29  MVQQWPPATCSG--VRCYANP--PAMFTIHGLWPSNYSNVPLICTG--QPFNP-----TL 88

Query: 62  TQQLDTYWPNVIGGNNQKFWR----------------------------KIMYSLTVILN 121
             QL+TYWP+VI GNNQ+FW+                               Y L  ILN
Sbjct: 89  VPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQTTLNIRTNHNYDLLAILN 148

Query: 122 SSG----------FGSVPNKLQPKLGIATIPHLRCQSKLHG--PQLYEIGLSFEKDGATL 146
           ++G          +G++   +Q   G    P LRC         QL+EI L F+K+G TL
Sbjct: 149 TAGLGPTGTNTRQYGAIEGAIQAATG--KKPGLRCNKNAQSKKKQLFEIILCFDKNGVTL 199

[Close]

BLAST of Sed0013748 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 51/182 (28.02%), Postives = 75/182 (41.21%), Query Frame = 0


Query: 3   VQQYPEARC----SGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQL 62
           VQQ+P A C    SG      LR      FT+HGLW      +   CP  Q       ++
Sbjct: 7   VQQWPPAVCSFQKSGSCPGSGLR-----TFTIHGLWPQGSGTSLTNCP--QGSPFDITKI 66

Query: 63  ASITQQLDTYWPNVIGGNNQKFW----------------RKIMYSLTVIL--NSSGFGSV 122
           + +  QL+T WPNV+  NNQ+FW                +   + L V +  N    G++
Sbjct: 67  SHLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGAL 126

Query: 123 -PNKLQP--------------KLGIATIPHLRCQS--KLHGPQLYEIGLSFEKDGATLMD 146
            P+   P              K      P LRC++  +     L ++   F +DG+TL+D
Sbjct: 127 RPHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLID 181

[Close]

BLAST of Sed0013748 vs. ExPASy Swiss-Prot
Match: O80323 (Ribonuclease S-3 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07
Identity = 50/188 (26.60%), Postives = 70/188 (37.23%), Query Frame = 0


Query: 4   QQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGAS-VVCPGVQTPLKPKFQLASIT 63
           QQY  A C+ +   CK   P   +FTVHGLW +++ G     CP      + K     + 
Sbjct: 30  QQYQLAVCNSNRTLCK--DPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKL----LE 89

Query: 64  QQLDTYWPNVIG-GNNQKFWRKIMYSLTVILNSSGFGSVPN------------------- 123
            QL+  WPNV     N  FW K          S G+ ++ N                   
Sbjct: 90  HQLEIIWPNVFDRTKNNLFWDKEWMK----HGSCGYPTIDNENHYFETVIKMYISKKQNV 149

Query: 124 -------KLQP---KLGIATI------------PHLRCQSKLHGPQLYEIGLSFEKDGAT 149
                  K++P   K  +  I            P L+CQ K    +L EI L  +K G  
Sbjct: 150 SRILSKAKIEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGEH 207

[Close]

BLAST of Sed0013748 vs. ExPASy Swiss-Prot
Match: Q38717 (Ribonuclease S-4 OS=Antirrhinum hispanicum OX=49039 GN=S4 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.9e-05
Identity = 26/85 (30.59%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           LV Q+P++ C  ++  C+ R P+PS FT+HGLW ++ +  +       T    +F    I
Sbjct: 38  LVLQWPKSFCLINSRKCQ-RNPLPSNFTIHGLWPDNYTRQAP--QSCTTNNFQRFTDTDI 97

Query: 62  TQQLDTYWPNV----IGGNNQKFWR 83
            Q+++  WP++    I G +  FW+
Sbjct: 98  EQRMEESWPDLKQQSIAGLSYNFWQ 119

[Close]

BLAST of Sed0013748 vs. ExPASy Swiss-Prot
Match: Q38716 (Ribonuclease S-2 OS=Antirrhinum hispanicum OX=49039 GN=S2 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04
Identity = 27/84 (32.14%), Postives = 39/84 (46.43%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           LV Q+P + CS    +C  R  +PS FT+HGLW ++ S     C      +  K     +
Sbjct: 38  LVLQWPNSYCSLKTTHCP-RTRLPSQFTIHGLWPDNKSWPLSNCRDTSADVL-KITDKGL 97

Query: 62  TQQLDTYWPNVIGGN----NQKFW 82
            Q L  +WP++         QKFW
Sbjct: 98  IQDLAVHWPDLTRRQRKVPGQKFW 119

[Close]

BLAST of Sed0013748 vs. ExPASy TrEMBL
Match: A0A6J1EXD5 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+P A CSG  V C   P  P++FT+HGLW ++ S   +VC G   P  P  Q+A++
Sbjct: 29  MVQQWPPATCSG--VRCYANP--PAMFTIHGLWPSNYSNVPLVCAG--QPFNPA-QIATL 88

Query: 62  TQQLDTYWPNVIGGNNQKFWR----------------------------KIMYSLTVILN 121
             QL+TYWP+VI GNNQ+FW+                               Y L  ILN
Sbjct: 89  VPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQTTLNIRTNHNYDLLAILN 148

Query: 122 SSG----------FGSVPNKLQPKLGIATIPHLRCQSKLHG--PQLYEIGLSFEKDGATL 146
           ++G          +G++   +Q   G    P LRC         QL+EI L F+K+G TL
Sbjct: 149 TAGLGPTATNTRQYGAIEGAIQAATG--KKPGLRCNKNAQSKKKQLFEIILCFDKNGVTL 203

[Close]

BLAST of Sed0013748 vs. ExPASy TrEMBL
Match: A0A6J1F837 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+P A+CS   V C ++P  P++FT+HGLW ++ S A +VC     P  P  Q+A++
Sbjct: 31  MVQQWPPAKCSSVKVRCHVQP--PTMFTIHGLWPSNYSNARLVC--APQPFNPT-QIAAL 90

Query: 62  TQQLDTYWPNVIGGNNQKFWR----------------------------KIMYSLTVILN 121
             QL+TYWP+VI G NQ+FW+                               Y L  ILN
Sbjct: 91  RPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFNQLQYFQITLNIRTNHSYDLLTILN 150

Query: 122 SSGFGSVPNKLQP--------KLGIATIPHLRC----QSKLHGPQLYEIGLSFEKDGATL 146
           ++G G     ++         +      P LRC    QSK    QL EI L F+KDG TL
Sbjct: 151 AAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSK-EKKQLLEIILCFDKDGITL 208

[Close]

BLAST of Sed0013748 vs. ExPASy TrEMBL
Match: A0A6J1IAR7 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.8e-18
Identity = 64/184 (34.78%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+P A CSG  V C   P  P++FT+HGLW +  S    VC G   P   + Q+A++
Sbjct: 30  MVQQWPPATCSG--VRCYANP--PAMFTIHGLWPSTYSNVPPVCAG--QPF-DRAQIATL 89

Query: 62  TQQLDTYWPNVIGGNNQKFWR----------------------------KIMYSLTVILN 121
             QL+TYWP+VI GNNQ+FW+                               Y L  ILN
Sbjct: 90  EPQLNTYWPDVINGNNQRFWKHEWDNHGTCSDPPFNQLQYFQTTLNIRTNHNYDLLAILN 149

Query: 122 SSGFG----------SVPNKLQPKLGIATIPHLRCQSKLHG--PQLYEIGLSFEKDGATL 146
           ++G G          ++   +Q   G    P LRC         QL+EI L F+K+G TL
Sbjct: 150 TAGLGPTATTTRQYQAIEGAIQAATG--KKPGLRCNKNAQSKRKQLFEIILCFDKNGVTL 204

[Close]

BLAST of Sed0013748 vs. ExPASy TrEMBL
Match: A0A6J1DYQ5 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111024276 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 6.4e-18
Identity = 63/182 (34.62%), Postives = 87/182 (47.80%), Query Frame = 0


Query: 1   MLVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLW--LNDVSGASVVCPGVQTPLKPKFQL 60
           ++VQQ+   +C+G NV C   PP+P+ FT+HGLW  +N+     + CPG   P  P    
Sbjct: 26  LMVQQWGPNKCTGVNVTCHGTPPLPT-FTIHGLWPGINNSPRPLINCPG--PPFDPAQIT 85

Query: 61  ASITQQLDTYWPNVIGGNNQKFWR-------KIMYS----------------------LT 120
           AS  QQLDTYWP+V    NQ FW+       K  Y                       L 
Sbjct: 86  ASQRQQLDTYWPDVQNWRNQSFWQHEWETHGKCSYPNFRQTAYLEAALDIRRNHNYDLLA 145

Query: 121 VILNSSGFGSVPNKLQPKLGIAT--IPHLRCQSKLH--GPQLYEIGLSFEKDGATLMDCT 148
           +I N +G     N ++  +  AT   P LRC    H    QL+EI L F+++G TL+DC 
Sbjct: 146 IIHNPTGMIHNYNAIEAAIQAATNRTPFLRCNVNAHTGRHQLFEIVLCFDRNGVTLIDCN 204

[Close]

BLAST of Sed0013748 vs. ExPASy TrEMBL
Match: A0A6J1G4E7 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111450689 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.5e-14
Identity = 55/180 (30.56%), Postives = 84/180 (46.67%), Query Frame = 0


Query: 2   LVQQYPEARCSGDNVNCKLRPPIPSIFTVHGLWLNDVSGASVVCPGVQTPLKPKFQLASI 61
           +VQQ+    CSG  V CK++PP  + FT+HGLW ++ S A ++C G    L+       +
Sbjct: 25  MVQQWAPTFCSGIGVTCKVQPP-QNKFTIHGLWPSNFSNAKLICSG--GDLQQNKLPHRL 84

Query: 62  TQQLDTYWPNVIGGNNQKFWR--------------------------KIMYSLTVILNSS 121
           + +L  +WPN+  GN+  FWR                           + Y L  +LN++
Sbjct: 85  STKLKKHWPNLKCGNDFDFWRYEWRKHGRCSNPPLNPNQYLHTTIRMYLNYDLLGMLNAA 144

Query: 122 GFGSVPNKLQ-------PKLGIATIPHLRC--QSKLHGPQLYEIGLSFEKDGATLMDCTH 147
           G        Q        K  I  +P LRC   S+ +  QLYEI + FE++   L+DCT+
Sbjct: 145 GLSPSTTFRQYTYMENVLKNAIGAVPSLRCNVNSQSNEDQLYEIVICFEENSTNLIDCTY 201

The following BLAST results are available for this feature:

BLAST of Sed0013748 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906187.1	9.5e-24	38.59	ribonuclease MC-like [Benincasa hispida]	[more]
XP_022932791.1	2.9e-20	35.87	ribonuclease MC-like [Cucurbita moschata]	[more]
XP_022934593.1	8.3e-20	35.87	ribonuclease MC-like [Cucurbita moschata]	[more]
KAG6581688.1	1.2e-18	34.78	hypothetical protein SDJN03_21690, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023514499.1	2.1e-18	34.24	ribonuclease MC-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0013748 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	1.2e-08	28.02	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
O80323	2.9e-07	26.60	Ribonuclease S-3 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1	[more]
Q38717	7.9e-05	30.59	Ribonuclease S-4 OS=Antirrhinum hispanicum OX=49039 GN=S4 PE=2 SV=1	[more]
Q38716	1.8e-04	32.14	Ribonuclease S-2 OS=Antirrhinum hispanicum OX=49039 GN=S2 PE=2 SV=1	[more]

BLAST of Sed0013748 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXD5	1.4e-20	35.87	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1	[more]
A0A6J1F837	4.0e-20	35.87	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1	[more]
A0A6J1IAR7	3.8e-18	34.78	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1	[more]
A0A6J1DYQ5	6.4e-18	34.62	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111024276 PE=3 SV=1	[more]
A0A6J1G4E7	2.5e-14	30.56	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111450689 PE=3 SV=1	[more]

BLAST of Sed0013748 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 1..87 e-value: 4.3E-12 score: 48.4
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 1..147
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 1..82 e-value: 5.0E-10 score: 39.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013748.1	Sed0013748.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding