
Sed0013703 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAACCCTTGCTCTGAAGATAGCGTAAGCTGCTAAAACTAGGTGTTTTCATCAACTAATAACATGAAATGGGGATTTAAAGATGTGCCCTTTCTACAGGATCAGACCACCGTAGTGGGTTTTGAAGTTCCAAAGTCACCGGATTCATCCTACAACAATGTATACCTTGGGAGCGAAGACGAGGCACGCGATCCACCACTTGTCCCACCTCATTTGCAGCACACCTTACTCGGCCACCCTGCAAGCAGAGATGCTGGTGAAACTCTTCCATTGCCACAGAATGCGATTCTCAACCATCTCTTTATCGAAAACCGGGAGACTCCACGATCCGTTGTGGCTCTTGGATTCACACATCGTTTTCATTCGAAATATGTCACAGTCGTGCTTTACAAACCGGTTCATAGAAGAGGGAGTAGCAGGGCTTAG ATGAACAACCCTTGCTCTGAAGATAGCGATCAGACCACCGTAGTGGGTTTTGAAGTTCCAAAGTCACCGGATTCATCCTACAACAATGTATACCTTGGGAGCGAAGACGAGGCACGCGATCCACCACTTGTCCCACCTCATTTGCAGCACACCTTACTCGGCCACCCTGCAAGCAGAGATGCTGGTGAAACTCTTCCATTGCCACAGAATGCGATTCTCAACCATCTCTTTATCGAAAACCGGGAGACTCCACGATCCGTTGTGGCTCTTGGATTCACACATCGTTTTCATTCGAAATATGTCACAGTCGTGCTTTACAAACCGGTTCATAGAAGAGGGAGTAGCAGGGCTTAG ATGAACAACCCTTGCTCTGAAGATAGCGATCAGACCACCGTAGTGGGTTTTGAAGTTCCAAAGTCACCGGATTCATCCTACAACAATGTATACCTTGGGAGCGAAGACGAGGCACGCGATCCACCACTTGTCCCACCTCATTTGCAGCACACCTTACTCGGCCACCCTGCAAGCAGAGATGCTGGTGAAACTCTTCCATTGCCACAGAATGCGATTCTCAACCATCTCTTTATCGAAAACCGGGAGACTCCACGATCCGTTGTGGCTCTTGGATTCACACATCGTTTTCATTCGAAATATGTCACAGTCGTGCTTTACAAACCGGTTCATAGAAGAGGGAGTAGCAGGGCTTAG MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA Homology
BLAST of Sed0013703 vs. NCBI nr
Match: XP_038902942.1 (SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida] >XP_038902943.1 SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida]) HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56 Identity = 110/117 (94.02%), Postives = 112/117 (95.73%), Query Frame = 0
BLAST of Sed0013703 vs. NCBI nr
Match: XP_004145755.1 (SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >XP_008465360.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_008465361.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_011657018.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >XP_016903370.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_031742408.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >KAA0035235.1 SNF1-related protein kinase regulatory subunit beta-3 isoform X2 [Cucumis melo var. makuwa] >KGN46863.1 hypothetical protein Csa_020718 [Cucumis sativus] >TYK22390.1 SNF1-related protein kinase regulatory subunit beta-3 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 226.9 bits (577), Expect = 9.2e-56 Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0
BLAST of Sed0013703 vs. NCBI nr
Match: XP_022958406.1 (SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >XP_022958407.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >XP_022958408.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >KAG6606042.1 SNF1-related protein kinase regulatory subunit beta-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035994.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54 Identity = 106/115 (92.17%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Sed0013703 vs. NCBI nr
Match: XP_022996167.1 (SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima] >XP_022996168.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima] >XP_022996169.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima]) HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54 Identity = 105/115 (91.30%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of Sed0013703 vs. NCBI nr
Match: XP_022140750.1 (SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia] >XP_022140751.1 SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia]) HSP 1 Score: 218.8 bits (556), Expect = 2.5e-53 Identity = 104/117 (88.89%), Postives = 108/117 (92.31%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy Swiss-Prot
Match: Q9ZUU8 (SNF1-related protein kinase regulatory subunit beta-3 OS=Arabidopsis thaliana OX=3702 GN=KINB3 PE=1 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 2.6e-37 Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.3e-25 Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 7.7e-21 Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.7e-09 Identity = 34/95 (35.79%), Postives = 49/95 (51.58%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.6e-08 Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy TrEMBL
Match: A0A1S3CP39 (SNF1-related protein kinase regulatory subunit beta-3 OS=Cucumis melo OX=3656 GN=LOC103502997 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.5e-56 Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy TrEMBL
Match: A0A5A7T1A3 (SNF1-related protein kinase regulatory subunit beta-3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00140 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.5e-56 Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy TrEMBL
Match: A0A0A0KBG3 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147560 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.5e-56 Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy TrEMBL
Match: A0A6J1H1Z8 (SNF1-related protein kinase regulatory subunit beta-3-like OS=Cucurbita moschata OX=3662 GN=LOC111459640 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 6.5e-55 Identity = 106/115 (92.17%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Sed0013703 vs. ExPASy TrEMBL
Match: A0A6J1KA31 (SNF1-related protein kinase regulatory subunit beta-3-like OS=Cucurbita maxima OX=3661 GN=LOC111491475 PE=3 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54 Identity = 105/115 (91.30%), Postives = 108/115 (93.91%), Query Frame = 0
BLAST of Sed0013703 vs. TAIR 10
Match: AT2G28060.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 156.0 bits (393), Expect = 1.9e-38 Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Sed0013703 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.6e-26 Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Sed0013703 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.6e-26 Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Sed0013703 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.6e-26 Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Sed0013703 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 101.3 bits (251), Expect = 5.5e-22 Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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