Sed0013566 (gene) Chayote v1

Overview


Name	Sed0013566
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L4-like
Location	LG04: 27463057 .. 27465528 (+)
RNA-Seq Expression	Sed0013566
Synteny	Sed0013566

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGAGGAAAAAAAAACCCTAGTTTATTCCGGCAACTGCTCGATACTAAAAAATGGCCGCCGCAGCCGCCCGTCCTCTTGTCGCCGTCCAACTTCTCGAAGGCGACATGGCCACCGATACTGCTCCGTCAGTCCCGTTGCCTCATCTCATGAAAGCTCCACTCCGGCCAGATATTGTCTCCTTCGTCCACAGCAACATGTCCAAGAACAGCCGCCAACCTTACGCCGTCAGCAAGCGTGCCGGTCACCAAACCTCCGCCGAGTCCTGGGGTACCGGACGAGCCGTTTCTCGTATCCCTCGCGTTCCCGGCGGCGGTACTCACCGTGCCGGTCAAGCCGCTTTCGGCAACATGTGTCGAGGCGGACGCATGTTCGCTCCAACCAAGATCTGGCGCCGATGGCACCGACGGATCAACGTCAACCAAAAGAGGTACGCTATTGTTTCCGCCATTGCTGCTTCTGCTTGTCCTTCATTGGTTATGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTAGCGATTCGGCCGAGGGGATTGAGAAGACCTCTTCTGCGATTAAGGTATTGAAGCAGATCGGTGCGTTTCCGGATGCGGAGAAGGCGAAGGACAGCCACGCCATTAGGCCTGGTAAGGGTAAGATGAGGAACCGCCGCTACATTTCGCGAAAGGGTCCATTGATTGTGTACGGTACTGAAGGTGCTAAGCTCGTGAAGGCCTTCCGAAATATTCCTGGAATTGATTTGGTGAATGTTGAGCGGTTGAATCTTTTGAAGCTTGCTCCTGGAGGTCATCTCGGAAGATTTATAATCTGGACCAAAACTGCTTTCGAGAAGCTTGACTCTATTTATGGGTCGTTTGAGAAGGCTTCTGAGAAGAAGAATGGCTATGTTCTTCCAAGGGCCAAGATGGTCAATGCTGATTTGTCCAGGATTATCAATTCTGATGAGGTTCAATCTGTTGTGAAACCCATCAAGAAGGCTGTGAAGAGACCTTCTCTGAAGAAGAACCCACTCAAGAACCTCAACGCCATGTTGAAGCTTAACCCGTATGCAAAGACTGCAAAGAGAATGTCTTTGTTGGCTGAGGCACAGCGCGTGAAAGCTAAGAAGGAGAAGCTTGACAAGAAGAGGAACATTATCCCGAAGGTATCTGTTCAATTTGGCTTTGTGGATTTTAACTTTTTAATTACTCTTTGCTGGGTTTCCAATTTCTTCAGTTATATATATATGATCGGTCTTTCCTCTTTAAATCTTCTAGTAGCAGTATTTTTTAAATGAAATTTACAATGCTGTGAGTAATGAGATGAATTGTTTGAGTATTGCATTTTTTATCACTTAAAAATAATTTGGGGAACCATATTGATCAGTGTTATAGATAGTTTAGGCTACGTTGATGCCCTGCTAGATGTGAGGTTCACTGTACTTAAGAACATTTATATATAAAGATCTAGTATATCATGAATGGCAATATTAAAAAAAAAACTACTGATTTGTTAATGTTAGGTTTTAGTTCTTTTTTTACAATTTAATAAATGAAGCACCTTTCTGGACTTGCGTGGATCGTATGCACTTCTTTAGTTGCAAGGTTCTAAAATTTCTTGTTTGTAGTCATGTTTTGCTTGCAACTTGAACTTGATGAGAATTGGTGTTGGCAAGTTTCAGTTGTCACTTCACGTTTATGTTGTATATCAACTCTTCATTGTGGCATACCGGTTTGTTTAGGTTGTTGTTAGTCTCTATTTTTGCTTGCTATGATATTGAGAACCCAATCATCATGAGTGACTTAGTAGTGGTCAAGAGGATCCTTGGGAGCTGAGAGACGTTGGCTATCTACTTAAGAATTAATTTCTTACAAGTTTTCTTTACATCTAAATGTTACCGATTTAGGCTCTATGCCCCGTGACATTAGTTGAGGTGTACACAAGTTGGCTCCGGACAGTCAAGATATTGAGACCTTTACTGATCCTTGTGACCTTTTTTTTTGCAGGAGGAGGCTGTAGAAATAAGGGCTGCAGGAAAAGCATGGTACAAGACAATGATTTCAGACAGCGATTACACCGAGTTCGATAACTTCTCCAAGTGGCTGGGTGTCTCTCAGTGATTTCGTTTCTCTTTGACAATTTCCATAGACCTTAGTTTGTTTATTGAATTTTGTATGCTTCTATTGCTGTTGTTTCCTTTTCTGTTTTGTGTCATGGAGGAAGGTAGGTTGGCTGACTGTGATCTTGAGCTCCTACTTTCTTGCCTTACTTGTCATGATAGAAGAGTATTTATATTTGGAAATGAAATTGAACATCATCTGGAGATCTTAGAAGGTCAATTTAGTGTTTTGGTATCAGTAATTTGCTCTGTCTAACTTTTGAATCTATTGTTTGTTATTTTGATGGTTAATAGTAGCTGGTGTATTGTGGGTTTACCATCTTTGCAATAAATTTTCATGCGATTGAAGGCTTTTCTG

mRNA sequence

GAAAGAGGAAAAAAAAACCCTAGTTTATTCCGGCAACTGCTCGATACTAAAAAATGGCCGCCGCAGCCGCCCGTCCTCTTGTCGCCGTCCAACTTCTCGAAGGCGACATGGCCACCGATACTGCTCCGTCAGTCCCGTTGCCTCATCTCATGAAAGCTCCACTCCGGCCAGATATTGTCTCCTTCGTCCACAGCAACATGTCCAAGAACAGCCGCCAACCTTACGCCGTCAGCAAGCGTGCCGGTCACCAAACCTCCGCCGAGTCCTGGGGTACCGGACGAGCCGTTTCTCGTATCCCTCGCGTTCCCGGCGGCGGTACTCACCGTGCCGGTCAAGCCGCTTTCGGCAACATGTGTCGAGGCGGACGCATGTTCGCTCCAACCAAGATCTGGCGCCGATGGCACCGACGGATCAACGTCAACCAAAAGAGGTACGCTATTGTTTCCGCCATTGCTGCTTCTGCTTGTCCTTCATTGGTTATGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTAGCGATTCGGCCGAGGGGATTGAGAAGACCTCTTCTGCGATTAAGGTATTGAAGCAGATCGGTGCGTTTCCGGATGCGGAGAAGGCGAAGGACAGCCACGCCATTAGGCCTGGTAAGGGTAAGATGAGGAACCGCCGCTACATTTCGCGAAAGGGTCCATTGATTGTGTACGGTACTGAAGGTGCTAAGCTCGTGAAGGCCTTCCGAAATATTCCTGGAATTGATTTGGTGAATGTTGAGCGGTTGAATCTTTTGAAGCTTGCTCCTGGAGGTCATCTCGGAAGATTTATAATCTGGACCAAAACTGCTTTCGAGAAGCTTGACTCTATTTATGGGTCGTTTGAGAAGGCTTCTGAGAAGAAGAATGGCTATGTTCTTCCAAGGGCCAAGATGGTCAATGCTGATTTGTCCAGGATTATCAATTCTGATGAGGTTCAATCTGTTGTGAAACCCATCAAGAAGGCTGTGAAGAGACCTTCTCTGAAGAAGAACCCACTCAAGAACCTCAACGCCATGTTGAAGCTTAACCCGTATGCAAAGACTGCAAAGAGAATGTCTTTGTTGGCTGAGGCACAGCGCGTGAAAGCTAAGAAGGAGAAGCTTGACAAGAAGAGGAACATTATCCCGAAGGAGGAGGCTGTAGAAATAAGGGCTGCAGGAAAAGCATGGTACAAGACAATGATTTCAGACAGCGATTACACCGAGTTCGATAACTTCTCCAAGTGGCTGGGTGTCTCTCAGTGATTTCGTTTCTCTTTGACAATTTCCATAGACCTTAGTTTGTTTATTGAATTTTGTATGCTTCTATTGCTGTTGTTTCCTTTTCTGTTTTGTGTCATGGAGGAAGGTAGGTTGGCTGACTGTGATCTTGAGCTCCTACTTTCTTGCCTTACTTGTCATGATAGAAGAGTATTTATATTTGGAAATGAAATTGAACATCATCTGGAGATCTTAGAAGGTCAATTTAGTGTTTTGGTATCAGTAATTTGCTCTGTCTAACTTTTGAATCTATTGTTTGTTATTTTGATGGTTAATAGTAGCTGGTGTATTGTGGGTTTACCATCTTTGCAATAAATTTTCATGCGATTGAAGGCTTTTCTG

Coding sequence (CDS)

ATGGCCGCCGCAGCCGCCCGTCCTCTTGTCGCCGTCCAACTTCTCGAAGGCGACATGGCCACCGATACTGCTCCGTCAGTCCCGTTGCCTCATCTCATGAAAGCTCCACTCCGGCCAGATATTGTCTCCTTCGTCCACAGCAACATGTCCAAGAACAGCCGCCAACCTTACGCCGTCAGCAAGCGTGCCGGTCACCAAACCTCCGCCGAGTCCTGGGGTACCGGACGAGCCGTTTCTCGTATCCCTCGCGTTCCCGGCGGCGGTACTCACCGTGCCGGTCAAGCCGCTTTCGGCAACATGTGTCGAGGCGGACGCATGTTCGCTCCAACCAAGATCTGGCGCCGATGGCACCGACGGATCAACGTCAACCAAAAGAGGTACGCTATTGTTTCCGCCATTGCTGCTTCTGCTTGTCCTTCATTGGTTATGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTAGCGATTCGGCCGAGGGGATTGAGAAGACCTCTTCTGCGATTAAGGTATTGAAGCAGATCGGTGCGTTTCCGGATGCGGAGAAGGCGAAGGACAGCCACGCCATTAGGCCTGGTAAGGGTAAGATGAGGAACCGCCGCTACATTTCGCGAAAGGGTCCATTGATTGTGTACGGTACTGAAGGTGCTAAGCTCGTGAAGGCCTTCCGAAATATTCCTGGAATTGATTTGGTGAATGTTGAGCGGTTGAATCTTTTGAAGCTTGCTCCTGGAGGTCATCTCGGAAGATTTATAATCTGGACCAAAACTGCTTTCGAGAAGCTTGACTCTATTTATGGGTCGTTTGAGAAGGCTTCTGAGAAGAAGAATGGCTATGTTCTTCCAAGGGCCAAGATGGTCAATGCTGATTTGTCCAGGATTATCAATTCTGATGAGGTTCAATCTGTTGTGAAACCCATCAAGAAGGCTGTGAAGAGACCTTCTCTGAAGAAGAACCCACTCAAGAACCTCAACGCCATGTTGAAGCTTAACCCGTATGCAAAGACTGCAAAGAGAATGTCTTTGTTGGCTGAGGCACAGCGCGTGAAAGCTAAGAAGGAGAAGCTTGACAAGAAGAGGAACATTATCCCGAAGGAGGAGGCTGTAGAAATAAGGGCTGCAGGAAAAGCATGGTACAAGACAATGATTTCAGACAGCGATTACACCGAGTTCGATAACTTCTCCAAGTGGCTGGGTGTCTCTCAGTGA

Protein sequence

MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRINVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVERLNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIINSDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLDKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ

Homology

[Close]

BLAST of Sed0013566 vs. NCBI nr
Match: XP_023539772.1 (60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 741.9 bits (1914), Expect = 3.0e-210
Identity = 379/406 (93.35%), Postives = 395/406 (97.29%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLVAVQ LEGDMATD AP+VPLP +MKA +RPDIV+FVH+N+SKN RQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+I
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           DKKRNIIPKEEA  IRAAGKAWY+TMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0013566 vs. NCBI nr
Match: XP_023005914.1 (60S ribosomal protein L4-like [Cucurbita maxima])

HSP 1 Score: 741.9 bits (1914), Expect = 3.0e-210
Identity = 379/406 (93.35%), Postives = 395/406 (97.29%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLVAVQ LEGDMATD AP+VPLP +MKA +RPDIV+FVH+N+SKN RQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+I
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           DKKRNIIPKEEA  IRAAGKAWY+TMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0013566 vs. NCBI nr
Match: XP_022944562.1 (60S ribosomal protein L4-like [Cucurbita moschata] >KAG6596446.1 60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027987.1 60S ribosomal protein L4-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 739.6 bits (1908), Expect = 1.5e-209
Identity = 378/406 (93.10%), Postives = 394/406 (97.04%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLVAVQ LEGDMATD AP+VPLP +MKA +RPDIV+FVH+N+SKN RQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+I
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           DKKRNIIPKEEA  IRAAGKAWY+TMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0013566 vs. NCBI nr
Match: KAG6580580.1 (60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017334.1 60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 738.0 bits (1904), Expect = 4.3e-209
Identity = 376/406 (92.61%), Postives = 393/406 (96.80%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLVAVQ LEGDMATD AP+VPLP +MKA +RPDIV+FVH+N+SKN RQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+I
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQIG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGID+VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           DKKRNIIPKEEA  ++AAGKAWY+TMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of Sed0013566 vs. NCBI nr
Match: XP_038905069.1 (60S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 736.1 bits (1899), Expect = 1.6e-208
Identity = 373/405 (92.10%), Postives = 394/405 (97.28%), Query Frame = 0


Query: 2   AAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVSK 61
           AAAAARPLVAVQ LEGDMATD++ +VPLP +MKA +RPDIV+FVH+N+SKNSRQPYAVSK
Sbjct: 3   AAAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNSRQPYAVSK 62

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRIN 121
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+IN
Sbjct: 63  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 122

Query: 122 VNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA
Sbjct: 123 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA 182

Query: 182 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVERL 241
            PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPG+D+VNVERL
Sbjct: 183 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVDIVNVERL 242

Query: 242 NLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRF++WTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADLSRIINS
Sbjct: 243 NLLKLAPGGHLGRFVVWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 302

Query: 302 DEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLD 361
           DEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKLD
Sbjct: 303 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 362

Query: 362 KKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           KKRNIIPKEEA  ++AAGKAWY+TMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of Sed0013566 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 1.5e-196
Identity = 345/405 (85.19%), Postives = 380/405 (93.83%), Query Frame = 0


Query: 2   AAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVSK 61
           AAAAARPLV VQ LEGDMATD   +V LP +MKA +RPDIV+FVHSN+SKNSRQPYAVSK
Sbjct: 4   AAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSK 63

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRIN 121
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+IN
Sbjct: 64  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 123

Query: 122 VNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYA+VSAIAASA PSLV+ARGH+IE+VPELPLV+SDS EG+E+TS+A+KVLKQIGA
Sbjct: 124 VNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGA 183

Query: 182 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVERL 241
           + DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPGID++NVERL
Sbjct: 184 YSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERL 243

Query: 242 NLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRF++WTK+AFEKLDSIYGSF+K SEKKNGYVLPR+KMVNADL+RIINS
Sbjct: 244 NLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINS 303

Query: 302 DEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLD 361
           DEVQSVV PI++  KR  LKKNPL+ LN MLKLNPYAKTA+RMSLLAEA+RVKAKKEKLD
Sbjct: 304 DEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLD 363

Query: 362 KKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           KKR  I KEEA  I+AAGKAWY+TMISDSDYTEFDNF+KWLGVSQ
Sbjct: 364 KKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]

BLAST of Sed0013566 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 4.9e-192
Identity = 336/406 (82.76%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLV +Q L+GDM+TD + +V LP +M AP+RPDIV+FVH+ +S NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRR+
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+AIVSAIAA+A P+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG++L +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTK+AFEKL+SIYGSFEK SEKK GYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTAKRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
            KKR  + KEEA+ I+AAGK+WYKTMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Sed0013566 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 664.5 bits (1713), Expect = 7.9e-190
Identity = 333/406 (82.02%), Postives = 374/406 (92.12%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD + +V LP +M AP+RPDIV+FVH+ +S NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRR+
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+AIVSAIAA+A P+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG++L +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTK+AFEKL+SIYGSFEK SEKK GYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTAKRMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           +KKR ++ KEEA  I+AAGKAWY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of Sed0013566 vs. ExPASy Swiss-Prot
Match: Q9D8E6 (60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3)

HSP 1 Score: 438.0 bits (1125), Expect = 1.2e-121
Identity = 222/383 (57.96%), Postives = 289/383 (75.46%), Query Frame = 0


Query: 4   AAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVSKRA 63
           A ARPL++V   +G+    +  +V LP + KAP+RPDIV+FVH+N+ KN+RQPYAVS+ A
Sbjct: 2   ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 61

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRINVN 123
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK WRRWHRR+N  
Sbjct: 62  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 121

Query: 124 QKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGAFP 183
           QKRYAI SA+AASA P+LVM++GHRIE VPELPLV+ D  EG +KT  A+++LK++ A+ 
Sbjct: 122 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVQLLKKLKAWN 181

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVERLNL 243
           D +K   S  +R GKGKMRNRR I R+GP I+Y  +   ++KAFRNIPGI L+NV +LN+
Sbjct: 182 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNI 241

Query: 244 LKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIINSDE 303
           LKLAPGGH+GRF IWT++AF KLD +YG++ KA+  K+ Y LP  KM+N DLSRI+ S E
Sbjct: 242 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPE 301

Query: 304 VQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLD-- 363
           +Q  ++  +K + R  LKKNPLKNL  MLKLNPYAKT +R ++L +A+  K + +KL+  
Sbjct: 302 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVKKLEAA 361

Query: 364 ------KKRNIIPKEEAVEIRAA 379
                 K   ++P++   + + A
Sbjct: 362 ATALATKSEKVVPEKGTADKKPA 380

[Close]

BLAST of Sed0013566 vs. ExPASy Swiss-Prot
Match: Q58DW0 (60S ribosomal protein L4 OS=Bos taurus OX=9913 GN=RPL4 PE=2 SV=3)

HSP 1 Score: 435.3 bits (1118), Expect = 7.8e-121
Identity = 218/356 (61.24%), Postives = 277/356 (77.81%), Query Frame = 0


Query: 4   AAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVSKRA 63
           A ARPL++V   +G+    +  +V LP + KAP+RPDIV+FVH+N+ KN+RQPYAVS+ A
Sbjct: 2   ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 61

Query: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRINVN 123
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK WRRWHRR+N  
Sbjct: 62  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 121

Query: 124 QKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGAFP 183
           QKRYAI SA+AASA P+LVM++GHRIE VPELPLV+ D  EG +KT  A+ +LK++ A+ 
Sbjct: 122 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 181

Query: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVERLNL 243
           D +K   S  +R GKGKMRNRR I R+GP I+Y  +   ++KAFRNIPGI L+NV +LN+
Sbjct: 182 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNI 241

Query: 244 LKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIINSDE 303
           LKLAPGGH+GRF IWT++AF KLD +YG++ KA+  K+ Y LP  KM+N DLSRI+ S E
Sbjct: 242 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMLNTDLSRILKSPE 301

Query: 304 VQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEK 360
           +Q  ++  +K + R  LKKNPLKNL  MLKLNPYAKT +R ++L +A+  K + +K
Sbjct: 302 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKIRMDK 353

[Close]

BLAST of Sed0013566 vs. ExPASy TrEMBL
Match: A0A6J1L0N2 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111498775 PE=3 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 1.4e-210
Identity = 379/406 (93.35%), Postives = 395/406 (97.29%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLVAVQ LEGDMATD AP+VPLP +MKA +RPDIV+FVH+N+SKN RQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+I
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           DKKRNIIPKEEA  IRAAGKAWY+TMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0013566 vs. ExPASy TrEMBL
Match: A0A6J1FVZ1 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111448977 PE=3 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 7.1e-210
Identity = 378/406 (93.10%), Postives = 394/406 (97.04%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLVAVQ LEGDMATD AP+VPLP +MKA +RPDIV+FVH+N+SKN RQPYAVS
Sbjct: 1   MAAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+I
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGI++VNVER
Sbjct: 181 ALPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIEVVNVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVNPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           DKKRNIIPKEEA  IRAAGKAWY+TMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNIIPKEEASGIRAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Sed0013566 vs. ExPASy TrEMBL
Match: A0A0A0LDW3 (Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736750 PE=3 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.3e-208
Identity = 372/404 (92.08%), Postives = 393/404 (97.28%), Query Frame = 0


Query: 3   AAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVSKR 62
           AAAARPLVAVQ+LEGDMATD++P+VPLP +MKA +RPDIVSFVHSN+SKNSRQPYAVSKR
Sbjct: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61

Query: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRINV 122
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+INV
Sbjct: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121

Query: 123 NQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGAF 182
           NQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+GA 
Sbjct: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181

Query: 183 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVERLN 242
           PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGID+VNVERLN
Sbjct: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241

Query: 243 LLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIINSD 302
           LLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPR+KMVNADL+RIINSD
Sbjct: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301

Query: 303 EVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLDK 362
           EVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKLDK
Sbjct: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361

Query: 363 KRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           KR IIPKE+A  ++AAGKAWY+TMISDSDYTEFDNFSKWLGVSQ
Sbjct: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]

BLAST of Sed0013566 vs. ExPASy TrEMBL
Match: A0A6J1F3R9 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.3e-208
Identity = 373/405 (92.10%), Postives = 392/405 (96.79%), Query Frame = 0


Query: 2   AAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVSK 61
           AAAAARPLVAVQ LEGD+ATD AP+VPLP +MKA +RPDIV+FVH+N+SKN RQPYAVSK
Sbjct: 3   AAAAARPLVAVQSLEGDIATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 62

Query: 62  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRIN 121
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+IN
Sbjct: 63  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 122

Query: 122 VNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGA 181
           VNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+GA
Sbjct: 123 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQVGA 182

Query: 182 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVERL 241
            PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGID+VNVERL
Sbjct: 183 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 242

Query: 242 NLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIINS 301
           NLLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADLSRIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 302

Query: 302 DEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLD 361
           DEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKLD
Sbjct: 303 DEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 362

Query: 362 KKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           KKRNIIPKEEA  ++AAGKAWY+TMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of Sed0013566 vs. ExPASy TrEMBL
Match: A0A5D3DP61 (60S ribosomal protein L4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002230 PE=3 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.0e-208
Identity = 375/406 (92.36%), Postives = 395/406 (97.29%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLVAVQ LEGDMATD++P+VPLP +MKA +RPDIVSFVHSN+SKNSRQPYAVS
Sbjct: 1   MAAAAARPLVAVQTLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR+I
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVNQKRYA+VSAIAASA PSLV+ARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+G
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           AFPDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGID+VNVER
Sbjct: 181 AFPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTKTAFEKLDSIYGSFEK+SEKK GYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTA+RMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           DKKR+ IPKE+A  ++AAGKAWY+TMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRS-IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]

BLAST of Sed0013566 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 671.8 bits (1732), Expect = 3.5e-193
Identity = 336/406 (82.76%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLV +Q L+GDM+TD + +V LP +M AP+RPDIV+FVH+ +S NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRR+
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+AIVSAIAA+A P+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG++L +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTK+AFEKL+SIYGSFEK SEKK GYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTAKRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
            KKR  + KEEA+ I+AAGK+WYKTMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Sed0013566 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 665.6 bits (1716), Expect = 2.5e-191
Identity = 335/406 (82.51%), Postives = 375/406 (92.36%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           MAAAAARPLV +Q L+GDM+TD + +V LP +M AP+RPDIV+FVH+ +S NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRR+
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+AIVSAIAA+A P+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG++L +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTK+AFEKL+SIYGSFEK SEKK GYVLPRAKMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDE+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTAKRMSLLAEAQRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
            KKR  + K EA+ I+AAGK+WYKTMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTK-EALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 405

[Close]

BLAST of Sed0013566 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 664.5 bits (1713), Expect = 5.6e-191
Identity = 333/406 (82.02%), Postives = 374/406 (92.12%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD + +V LP +M AP+RPDIV+FVH+ +S NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRR+
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+AIVSAIAA+A P+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG++L +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTK+AFEKL+SIYGSFEK SEKK GYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTAKRMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           +KKR ++ KEEA  I+AAGKAWY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of Sed0013566 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 658.3 bits (1697), Expect = 4.0e-189
Identity = 332/406 (81.77%), Postives = 373/406 (91.87%), Query Frame = 0


Query: 1   MAAAAARPLVAVQLLEGDMATDTAPSVPLPHLMKAPLRPDIVSFVHSNMSKNSRQPYAVS 60
           +A+AAARPLV VQ L+GDM+TD + +V LP +M AP+RPDIV+FVH+ +S NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRI 120
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRR+
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 121 NVNQKRYAIVSAIAASACPSLVMARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIG 180
           NVN KR+AIVSAIAA+A P+LVMARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQIG
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDLVNVER 240
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG++L +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 241 LNLLKLAPGGHLGRFIIWTKTAFEKLDSIYGSFEKASEKKNGYVLPRAKMVNADLSRIIN 300
           LNLLKLAPGGHLGRF+IWTK+AFEKL+SIYGSFEK SEKK GYVLPRAKMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 301 SDEVQSVVKPIKKAVKRPSLKKNPLKNLNAMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360
           SDEVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTAKRMSLLAEA RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 361 DKKRNIIPKEEAVEIRAAGKAWYKTMISDSDYTEFDNFSKWLGVSQ 407
           +KKR ++ K EA  I+AAGKAWY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTK-EAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 406

The following BLAST results are available for this feature:

BLAST of Sed0013566 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539772.1	3.0e-210	93.35	60S ribosomal protein L4-like [Cucurbita pepo subsp. pepo]	[more]
XP_023005914.1	3.0e-210	93.35	60S ribosomal protein L4-like [Cucurbita maxima]	[more]
XP_022944562.1	1.5e-209	93.10	60S ribosomal protein L4-like [Cucurbita moschata] >KAG6596446.1 60S ribosomal p...	[more]
KAG6580580.1	4.3e-209	92.61	60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_038905069.1	1.6e-208	92.10	60S ribosomal protein L4 [Benincasa hispida]	[more]

BLAST of Sed0013566 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	1.5e-196	85.19	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	4.9e-192	82.76	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	7.9e-190	82.02	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
Q9D8E6	1.2e-121	57.96	60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3	[more]
Q58DW0	7.8e-121	61.24	60S ribosomal protein L4 OS=Bos taurus OX=9913 GN=RPL4 PE=2 SV=3	[more]

BLAST of Sed0013566 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0N2	1.4e-210	93.35	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111498775 PE=3 S...	[more]
A0A6J1FVZ1	7.1e-210	93.10	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111448977 PE=3...	[more]
A0A0A0LDW3	2.3e-208	92.08	Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73...	[more]
A0A6J1F3R9	2.3e-208	92.10	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3...	[more]
A0A5D3DP61	3.0e-208	92.36	60S ribosomal protein L4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Sed0013566 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	3.5e-193	82.76	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	2.5e-191	82.51	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	5.6e-191	82.02	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	4.0e-189	81.77	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 343..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..74
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 3..406
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 3..406
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 282..353 e-value: 8.0E-28 score: 96.3
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 27..267 e-value: 4.0E-39 score: 134.3
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 4..309 e-value: 1.9E-140 score: 469.2
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 21..268
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 121..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013566.1	Sed0013566.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome