Sed0013555 (gene) Chayote v1

Overview


Name	Sed0013555
Type	gene
Organism	Sechium edule (Chayote v1)
Description	GATA transcription factor 21-like
Location	LG13: 23545646 .. 23548747 (-)
RNA-Seq Expression	Sed0013555
Synteny	Sed0013555

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCACATATTGCCCACTTTTCTGGACACAAATAGTCATCCCATTCTCTTTCTCTCTCTCTCTCTCTCTCTCTAGATCTCTCCCATGAATTCTCTCTTTCCATTAATGGAGAAACAAGAAGAAGAAGATGCCAATCTTCAACTCTATATTTTCTCCTCTAATTCTCATGTAGCTTCTTCTTCTTCAAAGCTTGCTTTTGCCACTTGTTTTAGTAGTGCCACCCAACATGATCATCAAAGAGTGAATCTTCATCATCATGATCATCTTCTTCAACAATCTCACCATCAACTTCAACTTGATCATCATCAGGCAATTACCTACGACCTCAATCGTCGTCATTGTTTGAATTCGTTCCTTTTCTTTCTTGTTGATTCTTGATTCGTAACGTGATCGCTTACTTTTAGTTTTCTTTTTCGATAGATTCAACTTTTTTTTTATAACTAGAAAATGGACCACTTGTAGACAGTCATTTTTAGTTTAATAGTTGTTTTGCTATATATTCAAAACACTTGTCCTCGTCCCAAATTCTGAACCTATAAGGCAGTCAGAGATTTTGCAATCAAACTCACTTGTGAGTTTAAGAACCAGAAACCTTAATTAAATAGAGCATATTTTGAAAATCACAAACTTTTACCAACGAATTTGTTCTTTGGGGACCAGTTTTTTTTTAGGGTTTCTTCATATTCTTAGCATTTCCTTTCATTTTTCAGTTTAGAAATTAGTACAAGACCAGACAAGTAATTAACGATGAAAATTTAAAAAAACACTAACATTATTAGAGTTTATACACATGACTTCCTATTCTAATATACTATATTAAGTCGAATAGGTCTTAAAAACTACTAGCTAAACCGTTTTCGATGTATCGATACATTATATCCTTAATTGGAGATCTTTCTTACAATCTCCCGAAGATGTAAGCGTATGTATCTTACATACTTTTCCATTGTCTTTAATAAAGTATCTTTCTCTAAATAAAAAAATATCTACTCCCATATGATCTTTTTTTTTTTTTTTTTGTAGTTGAGAACAATATATTTGATGGCTAACTGTTGTGATACATATTGTGTATAAATAGGCTGAAAAATCCATTGGTGGATCAAGAGAAGAAAGCAATGAAGTGATTATATTTCCATCTAGCACAAGGGAGGACTTTGAAAGATCAAGATCAAATAACATTGATCATCAACAACAACTAGATGATGCTCAAGTCAACAAATTCCAAGATCAAAATGGTTCAGCTGCAAAACACTGGATGTCTTCAAAGACAAGATTGATGCAAAAAATGATGATAAACAAAGACAAGAAAGTTGGTGTTATTGCAAATTCAGGCCCAAGAGGTGGAAAATGGGAAATTAGGGCTGGAAGATATTCATCAACAACTTATAATTCAAATGGACATAATAATAATAGCAACAATGGAGTTAGGGTTTGCAGTGATTGTAACACAACAACAACTCCCCTTTGGAGAAGTGGTCCTCAAGGCCCTAAGGTCATTTTTCTTCCTCTCTCTCTTTCTCTATGACAAATTAAATTTACTTTTTGTTCACTCCCCCTTGTGTTTTCTTGCATGTACACTGTCCAAAACCAAAAGAAATCACTACCCTTTTTGTTTATTTGCACCACAAGTTGACCAATTTCTTTGTTTTTTCTCATTTTCTAGATTTTTCCCTGCAAAAGCTACTCATTTCAGTAAAAACTTTGGTGGTCTCAGTAATATTAGTGGTGCCAATAGACTGACTTTCAACAGAGTCGCTTTCCATCTCTGCTCATTATGACTTTACTTTTAATTTCACTTAAATAGTCCGTAAAACTTAAATGATCATCATAGGTAATATATAGGGGTGTACAATGGTTCACGATAGTTTGGGTTAGGAGTAATCAAGAATTTTGGGTTGGTCGATCTGTCAACCTGTCTAATCTATACATTAAAGCAACCTAATTCATATATATTTTTTTAATTGAGTTGGTTTCTAAGATTGTGAATAATGTATATCATTTTTCCTTTCATAACTGTATAAAAAAAACTGTGATACTATACTTAAACCTAAGGTTAGTTATAGTATTGGTCCATATTTCTTACTAATATACTAATAATGTATCTTATTAATAATTTTACATTCATACATATAACTCAACCTTAGAACTAATCCACTCAATCAACTTTTACGTACGGTTTGAATTGGATAGTCGAGGTTGCTTGAATGGTCTTTTTTTTGTACACCCATAGTAATATTCACTGTATTTATACAATGAAATGATGTTATATTGCTTTAATAAACATAAGTTTAGATGAGACTTTGCTTCTTTAGTTTCACCTAAATATAAAAACTTAGATGATAATAATAATATAGTTAGAATAACCAGAAATTATTCTATAAGGCTAGCTGACAGTTAATTTGCACAATTGAATGTGTGTAAAAGAAATTAAGTTTTTTTATTATGCATCAAATAATTATTAAAGGTAATTTTTTTTATCATACATTCGAATATTAGTTATATTGTGATGATCTCATTGAATAATTTATCTAGGAGACTGACAGATAGTTTAAGTTCACATTTCGTTCTTACCGGTATATACCATATATAGATCTAATATTTATATTGGTTTCGTTTCTGGTTGGTAGACGCTATGCAATGCGTGTGGGATCCGGCAGAGGAAGGCAAGACGAGCCATGGCAGAAGCTACAAATGGCGGTGATGGTGGCTCGGTCGTTGTTGCATCGGAGACACCATCGAAGAAATCCCGCTTTGGCTGCCATGGAGATGGTGGCAGTATTATTGTTGGTGAAGTGAAGAACAAATGCAACAAGAATATGGCAGATAACAGTTGGGAGTCTCGAAGTGAAGGAACAAACGACGGCGTTTCGTTCGATCGCCATAACTTCACTTTAAGTTGGAGCAAAAGCGGTTCGGCTTTTGGGAGAGTGTTTCCGAGAGATGAAGAAGAAGCAGCCATTCTTTTGATGGAGCTTTCTTGTGGCCTTGTTCACAGCTAGCCGTTGACACACTTATTTTAAAATAATTCCCATTAAATCTTGTTTTTTTTTAACTTTTTTCACTTCTTGTTTTGGTTGAGAAAATCAATGTTTTTTTAGTGTGC

mRNA sequence

ATCACATATTGCCCACTTTTCTGGACACAAATAGTCATCCCATTCTCTTTCTCTCTCTCTCTCTCTCTCTCTAGATCTCTCCCATGAATTCTCTCTTTCCATTAATGGAGAAACAAGAAGAAGAAGATGCCAATCTTCAACTCTATATTTTCTCCTCTAATTCTCATGTAGCTTCTTCTTCTTCAAAGCTTGCTTTTGCCACTTGTTTTAGTAGTGCCACCCAACATGATCATCAAAGAGTGAATCTTCATCATCATGATCATCTTCTTCAACAATCTCACCATCAACTTCAACTTGATCATCATCAGGCTGAAAAATCCATTGGTGGATCAAGAGAAGAAAGCAATGAAGTGATTATATTTCCATCTAGCACAAGGGAGGACTTTGAAAGATCAAGATCAAATAACATTGATCATCAACAACAACTAGATGATGCTCAAGTCAACAAATTCCAAGATCAAAATGGTTCAGCTGCAAAACACTGGATGTCTTCAAAGACAAGATTGATGCAAAAAATGATGATAAACAAAGACAAGAAAGTTGGTGTTATTGCAAATTCAGGCCCAAGAGGTGGAAAATGGGAAATTAGGGCTGGAAGATATTCATCAACAACTTATAATTCAAATGGACATAATAATAATAGCAACAATGGAGTTAGGGTTTGCAGTGATTGTAACACAACAACAACTCCCCTTTGGAGAAGTGGTCCTCAAGGCCCTAAGACGCTATGCAATGCGTGTGGGATCCGGCAGAGGAAGGCAAGACGAGCCATGGCAGAAGCTACAAATGGCGGTGATGGTGGCTCGGTCGTTGTTGCATCGGAGACACCATCGAAGAAATCCCGCTTTGGCTGCCATGGAGATGGTGGCAGTATTATTGTTGGTGAAGTGAAGAACAAATGCAACAAGAATATGGCAGATAACAGTTGGGAGTCTCGAAGTGAAGGAACAAACGACGGCGTTTCGTTCGATCGCCATAACTTCACTTTAAGTTGGAGCAAAAGCGGTTCGGCTTTTGGGAGAGTGTTTCCGAGAGATGAAGAAGAAGCAGCCATTCTTTTGATGGAGCTTTCTTGTGGCCTTGTTCACAGCTAGCCGTTGACACACTTATTTTAAAATAATTCCCATTAAATCTTGTTTTTTTTTAACTTTTTTCACTTCTTGTTTTGGTTGAGAAAATCAATGTTTTTTTAGTGTGC

Coding sequence (CDS)

ATGAATTCTCTCTTTCCATTAATGGAGAAACAAGAAGAAGAAGATGCCAATCTTCAACTCTATATTTTCTCCTCTAATTCTCATGTAGCTTCTTCTTCTTCAAAGCTTGCTTTTGCCACTTGTTTTAGTAGTGCCACCCAACATGATCATCAAAGAGTGAATCTTCATCATCATGATCATCTTCTTCAACAATCTCACCATCAACTTCAACTTGATCATCATCAGGCTGAAAAATCCATTGGTGGATCAAGAGAAGAAAGCAATGAAGTGATTATATTTCCATCTAGCACAAGGGAGGACTTTGAAAGATCAAGATCAAATAACATTGATCATCAACAACAACTAGATGATGCTCAAGTCAACAAATTCCAAGATCAAAATGGTTCAGCTGCAAAACACTGGATGTCTTCAAAGACAAGATTGATGCAAAAAATGATGATAAACAAAGACAAGAAAGTTGGTGTTATTGCAAATTCAGGCCCAAGAGGTGGAAAATGGGAAATTAGGGCTGGAAGATATTCATCAACAACTTATAATTCAAATGGACATAATAATAATAGCAACAATGGAGTTAGGGTTTGCAGTGATTGTAACACAACAACAACTCCCCTTTGGAGAAGTGGTCCTCAAGGCCCTAAGACGCTATGCAATGCGTGTGGGATCCGGCAGAGGAAGGCAAGACGAGCCATGGCAGAAGCTACAAATGGCGGTGATGGTGGCTCGGTCGTTGTTGCATCGGAGACACCATCGAAGAAATCCCGCTTTGGCTGCCATGGAGATGGTGGCAGTATTATTGTTGGTGAAGTGAAGAACAAATGCAACAAGAATATGGCAGATAACAGTTGGGAGTCTCGAAGTGAAGGAACAAACGACGGCGTTTCGTTCGATCGCCATAACTTCACTTTAAGTTGGAGCAAAAGCGGTTCGGCTTTTGGGAGAGTGTTTCCGAGAGATGAAGAAGAAGCAGCCATTCTTTTGATGGAGCTTTCTTGTGGCCTTGTTCACAGCTAG

Protein sequence

MNSLFPLMEKQEEEDANLQLYIFSSNSHVASSSSKLAFATCFSSATQHDHQRVNLHHHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFERSRSNNIDHQQQLDDAQVNKFQDQNGSAAKHWMSSKTRLMQKMMINKDKKVGVIANSGPRGGKWEIRAGRYSSTTYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGDGGSVVVASETPSKKSRFGCHGDGGSIIVGEVKNKCNKNMADNSWESRSEGTNDGVSFDRHNFTLSWSKSGSAFGRVFPRDEEEAAILLMELSCGLVHS

Homology

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BLAST of Sed0013555 vs. NCBI nr
Match: XP_038898726.1 (GATA transcription factor 21-like [Benincasa hispida])

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-83
Identity = 223/385 (57.92%), Postives = 259/385 (67.27%), Query Frame = 0


Query: 1   MNSLFP-------LMEKQEEEDANLQLYIFSSNSHV------ASSSSKLAFATCF--SSA 60
           MN L+P         E+QEEED NL+LYIFSS S V      +SSSS+LAF +CF  S+A
Sbjct: 1   MNPLYPSSSFVEKQKEEQEEEDPNLKLYIFSSTSQVVAAAASSSSSSQLAFTSCFSTSNA 60

Query: 61  TQHDHQRVNLHHHDHLLQQSHHQLQLDHHQAEKS-IGGSREESNEVIIFPSSTREDFERS 120
           TQHD+Q +NLH H HLLQQSHHQL   HH+ EKS IGGSREE+   +IF S+ RE  ERS
Sbjct: 61  TQHDYQTMNLHLHHHLLQQSHHQLH-RHHKGEKSIIGGSREENE--VIFSSNMREASERS 120

Query: 121 RSNNIDHQQQLDDAQVNKFQDQNGSAAKHWMSSKTRLMQKMMINKDKK--VGVIANSGPR 180
           R   ++ + + DD Q+ K +D NGS AK+WMSSK RLMQKMMIN + K  +   ANS  +
Sbjct: 121 RL--LEKKVEDDDHQMMKKEDHNGS-AKYWMSSKMRLMQKMMINTNNKKVINGGANSDHQ 180

Query: 181 --------------GGKWEIRAGRYSSTTYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSG 240
                         GGKWE   G+ SS++ N N      NNGVRVCSDCNTTTTPLWRSG
Sbjct: 181 RATRNYNNNNNEGDGGKWETMTGKSSSSSCNRN--IGVQNNGVRVCSDCNTTTTPLWRSG 240

Query: 241 PQGPKTLCNACGIRQRKARRAMAEATNGGDGGSVVVASETPS--------KKSRFGCHGD 300
           PQGPK+LCNACGIRQRKARRAMAEA NGG GGSVV    TPS        KKSR  C GD
Sbjct: 241 PQGPKSLCNACGIRQRKARRAMAEAANGG-GGSVV--ETTPSGKKEMHKEKKSRLNCDGD 300

Query: 301 GGSIIVGEVK-NKCNKN---MADNSWESRSEG--TNDGVSFD-RHNFTLSWSKSG--SAF 337
                VG+VK NKCN N    + N+ +S+SE    N+ VSFD  HNFTL  SK+   SAF
Sbjct: 301 SNGGNVGDVKINKCNNNDDHKSYNNLKSQSEKGMMNNEVSFDGTHNFTLRLSKTSGPSAF 360

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BLAST of Sed0013555 vs. NCBI nr
Match: XP_022982396.1 (putative GATA transcription factor 22 [Cucurbita maxima])

HSP 1 Score: 292.7 bits (748), Expect = 3.9e-75
Identity = 192/343 (55.98%), Postives = 219/343 (63.85%), Query Frame = 0


Query: 1   MNSLFPLMEKQEEEDANLQLYIFSSNSHVASSSSKLAFATCF-SSATQHDHQRVNLHHHD 60
           MNSL+PLM K EE+D +L+LYIF S S VA++SS LAFATCF SSATQHDHQR++LHHH 
Sbjct: 1   MNSLYPLMAKHEEQDPDLKLYIFPSTSQVAAASSHLAFATCFTSSATQHDHQRMDLHHH- 60

Query: 61  HLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFERSRSNNIDHQ-QQLDDA 120
                         +Q EK I GSR                       +IDHQ QQLD+ 
Sbjct: 61  -------------QNQGEKEIDGSR----------------------TDIDHQEQQLDEY 120

Query: 121 QVNKFQDQNGSAAKHWMSSKTRLMQKMMINKDKKVGVIANSGPRGGKWEIRAGRYSSTTY 180
           Q+ K    NGSAAK+WMSSK RLMQKMM     KVG     G         AGR S+   
Sbjct: 121 QIKK--RDNGSAAKYWMSSKMRLMQKMM-----KVG----GGNSDQAAAAAAGRRSN--- 180

Query: 181 NSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGD 240
           N+ G +  S+NGVRVCSDCNTTTTPLWRSGPQGPK+LCNACGIRQRKARRAMAEA NGG 
Sbjct: 181 NNEGRSCCSSNGVRVCSDCNTTTTPLWRSGPQGPKSLCNACGIRQRKARRAMAEAANGGG 240

Query: 241 GGSVVVASET-----PSKKSRFGCHGDGGSIIVGEVKNKCNKNMADNSWESRSEGTNDGV 300
            G+VVVA+ +       KKSR   HGD       + K   N+NM +   ES+SEG NDGV
Sbjct: 241 RGAVVVAAASGKELYKEKKSRLSWHGDDDDGEEVKKKKGNNRNMGEKCLESQSEGRNDGV 285

Query: 301 SFDRHNFTLSWSKSGSAFGRVFPRDEEEAAILLMELSCGLVHS 337
                   L  SK+GSAFGRVFPRDEEEAAILLMELSCGLVH+
Sbjct: 301 --------LRLSKNGSAFGRVFPRDEEEAAILLMELSCGLVHT 285

[Close]

BLAST of Sed0013555 vs. NCBI nr
Match: XP_011654173.1 (GATA transcription factor 21 [Cucumis sativus] >KGN55332.1 hypothetical protein Csa_012659 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 6.7e-75
Identity = 205/409 (50.12%), Postives = 248/409 (60.64%), Query Frame = 0


Query: 2   NSLFPLMEKQEE-EDANLQLYIFSSNSHVASSSSKLAFATCFS-------SATQHDHQRV 61
           +S F   +KQEE ED NL+LYIFSS+S  ++SSS+LAF+ CFS       +   H HQ V
Sbjct: 9   SSSFVEKQKQEEQEDPNLKLYIFSSSSSSSNSSSQLAFSNCFSTNPPTTTAQHHHHHQTV 68

Query: 62  NLHHHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFERSR--SNNIDH 121
           NLH H HLLQQSHHQL L HHQ EK IGGSREE ++VI+  SS +E  ERSR     ++ 
Sbjct: 69  NLHLHHHLLQQSHHQLLLHHHQDEKFIGGSREEESKVILSSSSMKEGCERSRLLEKQVEE 128

Query: 122 QQQLDDAQV-NKFQDQNGSAAKHWMSSKTRLMQKMMINKD---KKVGV------------ 181
           +   D  Q+  K QD +  + K+WMSSK RLMQKMMIN +   KKV +            
Sbjct: 129 EDDNDHHQIMMKKQDDHNGSTKYWMSSKMRLMQKMMINTNHNYKKVMINGTDHGGANNSD 188

Query: 182 -----------IANSGPRGGKWEIRAGRYSSTTYNSNGHNNNS--NNGVRVCSDCNTTTT 241
                      I N G  GGKWE   G+ SS++ + N  N  S  NNGVRVCSDCNTTTT
Sbjct: 189 HHQKATRNYNSINNEG-NGGKWEAMTGKSSSSSISCNSSNIGSVQNNGVRVCSDCNTTTT 248

Query: 242 PLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGDGGSVVVASETPS----------KK 301
           PLWRSGPQGPK+LCNACGIRQRKARRAMA+      GG V   +E  +          KK
Sbjct: 249 PLWRSGPQGPKSLCNACGIRQRKARRAMADLAANSGGGLVAETTEAAATSGKKEKHKEKK 308

Query: 302 SRFGCHGD--GGSIIVGE---VKNK-CNKN-------MADNSWESRSE--GTNDGVSF-D 337
           SR  C GD  GG+  VG+   + +K CN N         +N+ +S+SE    N+ VSF  
Sbjct: 309 SRLSCEGDNNGGNNNVGDQVKINDKYCNNNNNTDDHISNNNNLKSKSEIGMMNNEVSFAS 368

[Close]

BLAST of Sed0013555 vs. NCBI nr
Match: XP_023524318.1 (GATA transcription factor 21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.0 bits (741), Expect = 2.6e-74
Identity = 193/348 (55.46%), Postives = 220/348 (63.22%), Query Frame = 0


Query: 1   MNSLFPLM------EKQEEEDANLQLYIFSSNSHVASSSSKLAFATCF-SSATQHDHQRV 60
           MNSL+PLM      E+ EE+  +L+LYIF S S VA++SS LAFATCF SSATQHDHQR+
Sbjct: 1   MNSLYPLMAKHEEHEEHEEQHPDLKLYIFPSTSQVAAASSHLAFATCFTSSATQHDHQRM 60

Query: 61  NLHHHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFERSRSNNIDHQ- 120
           +LHHH               +Q EKSI GSR                       +IDHQ 
Sbjct: 61  DLHHH--------------QNQGEKSIDGSR----------------------TDIDHQE 120

Query: 121 QQLDDAQVNKFQDQNGSAAKHWMSSKTRLMQKMMINKDKKVGVIANSGPRGGKWEIRAGR 180
           QQLD+ Q+ K    NGSAAK+WMSSK RLMQKMM     KVG   NS          AGR
Sbjct: 121 QQLDEYQIKK--GDNGSAAKYWMSSKMRLMQKMM-----KVGG-GNSDQAAAAAVAAAGR 180

Query: 181 YSSTTYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAE 240
            S+   N+ G +  S+NGVRVCSDCNTTTTPLWRSGPQGPK+LCNACGIRQRKARRAMAE
Sbjct: 181 RSN---NNEGRSCCSSNGVRVCSDCNTTTTPLWRSGPQGPKSLCNACGIRQRKARRAMAE 240

Query: 241 ATNGGDGGSVVVASE----TPSKKSRFGCHGDGGSIIVGEVKNKCNKNMADNSWESRSEG 300
           A NGG GG+VV A+        KKSR   HGD       + K   N+NM +   ES+SEG
Sbjct: 241 AANGGGGGAVVAAASGKELHKEKKSRLSWHGDDDDDEEVKKKKGNNRNMGEKCLESQSEG 293

Query: 301 TNDGVSFDRHNFTLSWSKSGSAFGRVFPRDEEEAAILLMELSCGLVHS 337
            NDGV        L  SK+GSAFGRVFPRDEEEAAILLMELSCGLVH+
Sbjct: 301 RNDGV--------LRLSKNGSAFGRVFPRDEEEAAILLMELSCGLVHT 293

[Close]

BLAST of Sed0013555 vs. NCBI nr
Match: XP_008452719.1 (PREDICTED: GATA transcription factor 21-like [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 5.7e-74
Identity = 205/411 (49.88%), Postives = 248/411 (60.34%), Query Frame = 0


Query: 2   NSLFP----LMEKQ---EEEDANLQLYIFSSNSHVASSSSKLAFATCFSSAT-------Q 61
           N L+P     +EKQ   E+ED NL+LYIFSS+S  +++SS+LAF+TCFS+ T        
Sbjct: 3   NPLYPSSSSFVEKQKQEEQEDPNLKLYIFSSSSS-SNTSSQLAFSTCFSTNTPTTTTTQH 62

Query: 62  HDHQRVNLHHHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFE-RSRS 121
           H HQ VNLH H HLLQQSHHQL L HHQ EK  GGSREE +EVI+  SS +E  E R   
Sbjct: 63  HHHQTVNLHLHHHLLQQSHHQLLLHHHQDEKFSGGSREEESEVILSSSSMKEGCESRLLE 122

Query: 122 NNIDHQQQLDDAQV-NKFQDQNGSAAKHWMSSKTRLMQKMMINKDK--KVGVI------- 181
             ++     D  Q+  K QD +  + K+WMSSK RLMQKMMIN +   K  VI       
Sbjct: 123 KQVEEDDDNDHHQIMMKKQDDHSGSTKYWMSSKMRLMQKMMINTNHNYKTKVIINGTDHG 182

Query: 182 ----------------ANSGPRGGKWEIRAGRYSSTTYNSNGHNNNS--NNGVRVCSDCN 241
                           +N+   GGKWE   G+ SS++ + N  N  S  NNGVRVCSDCN
Sbjct: 183 GANNSDHHQKATRNYNSNNEGNGGKWETMTGKSSSSSISCNSSNIGSVQNNGVRVCSDCN 242

Query: 242 TTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGDGGSVVVASETPS-------- 301
           TTTTPLWRSGPQGPK+LCNACGIRQRKARRAMA+       G V   +E  +        
Sbjct: 243 TTTTPLWRSGPQGPKSLCNACGIRQRKARRAMADLAANSSRGLVAETTEAAASGKKEKHK 302

Query: 302 -KKSRFGCHGD---GGSIIVGE---VKNK-CNKNMAD-----NSWESRSE--GTNDGVSF 337
            KKSR  C GD   GG+  VG+   + +K CNKN  D     N+ +S+SE    N+ VSF
Sbjct: 303 EKKSRLSCEGDNNNGGNNNVGDHAKINDKYCNKNTDDHISNNNNLKSKSEIGMMNNEVSF 362

[Close]

BLAST of Sed0013555 vs. ExPASy Swiss-Prot
Match: Q9SZI6 (Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 7.1e-27
Identity = 106/272 (38.97%), Postives = 143/272 (52.57%), Query Frame = 0


Query: 79  SIGGSREESNEVIIFPSSTREDFERSRSNNIDHQQQLDDAQVNKFQDQNGSAAKHWMSSK 138
           S GGS   S++ ++    TR      + +N  HQ Q D  Q +  +D  G+ +  W+SSK
Sbjct: 100 SDGGS--SSSDQMVPKKETRLKLTIKKKDN--HQDQTDLPQ-SPIKDMTGTNSLKWISSK 159

Query: 139 TRLMQKMMINKDKKVGVIANSGPRGGKWEIRAGRYSSTTYNSNGHNNNSNNGVRVCSDCN 198
            RLM+       KK  +I  S               S +   NG+NN+    +R+CSDCN
Sbjct: 160 VRLMK-------KKKAIITTSDSSKQHTNNDQSSNLSNSERQNGYNNDC--VIRICSDCN 219

Query: 199 TTTTPLWRSGPQGPKTLCNACGIRQRKARR-AMAEAT-NGGDGGSVVVASETPSKKSRFG 258
           TT TPLWRSGP+GPK+LCNACGIRQRKARR AMA AT     G S  V  +    K++  
Sbjct: 220 TTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATAVSGVSPPVMKKKMQNKNKI- 279

Query: 259 CHGDGGSIIVGEVKNKCN---------KNMADNSWESRSEGT----NDGVSFDRHNFTLS 318
              +G   I+  +  K N         +       E++S  T    +D + FD  +  L 
Sbjct: 280 --SNGVYKILSPLPLKVNTCKRMITLEETALAEDLETQSNSTMLSSSDNIYFD--DLALL 339

Query: 319 WSKSGSAFGRVFPRDEEEAAILLMELSCGLVH 336
            SKS SA+ +VFP+DE+EAAILLM LS G+VH
Sbjct: 340 LSKS-SAYQQVFPQDEKEAAILLMALSHGMVH 351

[Close]

BLAST of Sed0013555 vs. ExPASy Swiss-Prot
Match: Q5HZ36 (GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-25
Identity = 83/185 (44.86%), Postives = 106/185 (57.30%), Query Frame = 0


Query: 177 TYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARR-AMAEATN 236
           T N NG++NN N  +RVCSDCNTT TPLWRSGP+GPK+LCNACGIRQRKARR AMA A  
Sbjct: 216 TINENGYSNN-NGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAAAAA 275

Query: 237 GGDGGSVVVAS----------ETPSKKSRFGCHGDGGSIIVGEVKNKC------NKNM-- 296
            GD    V             +   K+S  G   +    +V + K KC       K M  
Sbjct: 276 AGDQEVAVAPRVQQLPLKKKLQNKKKRSNGGEKYNHSPPMVAKAK-KCKIKEEEEKEMEA 335

Query: 297 ----ADNSWESRSEGTNDGVSFDRHNF---TLSWSKSGSAFGRVFPRDEEEAAILLMELS 336
                D+     +  +N  +S ++  F   T+  SKS SA+ +VFP+DE+EAA+LLM LS
Sbjct: 336 ETVAGDSEISKSTTSSNSSISSNKFCFDDLTIMLSKS-SAYQQVFPQDEKEAAVLLMALS 395

[Close]

BLAST of Sed0013555 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.6e-18
Identity = 110/344 (31.98%), Postives = 148/344 (43.02%), Query Frame = 0


Query: 36  LAFATCFSSATQHDHQRVNLH--HHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIF 95
           + F     SA +H  Q           +L +S+ Q   DH      +GGS     +V + 
Sbjct: 36  ILFPFMIDSAVEHQGQIYGDQGLRRQQVLGESNQQFN-DH----MMMGGS-----DVFLT 95

Query: 96  PSSTREDFERSRSNNIDHQQ-QLDDAQVNKFQDQNGSAAKHWMSSKTRLMQKMMINKDKK 155
           PS  R   +   S+ I        D + N  Q  NGS +K WMS  T  M+  +I K   
Sbjct: 96  PSPFRPTIQSIGSDMIQRSSYDPYDIESNNKQHANGSTSK-WMS--TPPMKMRIIRKG-- 155

Query: 156 VGVIANSGPRGGKWEIRAGRYSSTTYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGP 215
               A + P GG       R  +    S      +   VRVCSDCNTT TPLWRSGP GP
Sbjct: 156 ----AATDPEGGAVRKPRRRAQAHQDESQQQLQQALGVVRVCSDCNTTKTPLWRSGPCGP 215

Query: 216 KTLCNACGIRQRKARRAMAEATNGGDG-------GSVVVASETPSKKSRFGCHGD----- 275
           K+LCNACGIRQRKARRAMA A NGG          +  V ++  +KK +     D     
Sbjct: 216 KSLCNACGIRQRKARRAMAAAANGGAAVAPAKSVAAAPVNNKPAAKKEKRAADVDRSLPF 275

Query: 276 ---------------------GGSIIVGEVKNKCN------KNMADNSWESRSEGTNDGV 335
                                 G ++    K++ +      +N A  S  +++       
Sbjct: 276 KKRCKMVDHVAAAVAATKPTAAGEVVAAAPKDQDHVIVVGGENAAATSMPAQN------- 335

Query: 336 SFDRHNFTLSWSKSGSAFGRVFPRDE-EEAAILLMELSCGLVHS 337
              +   T + + +  AF    PRDE  +AA+LLM LSCGLVHS
Sbjct: 336 PISKAAATAAAAAASPAFFHGLPRDEITDAAMLLMTLSCGLVHS 353

[Close]

BLAST of Sed0013555 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.2e-12
Identity = 58/179 (32.40%), Postives = 81/179 (45.25%), Query Frame = 0


Query: 179 NSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGD 238
           + +G  ++S +  R C DC T  TPLWR GP GPK+LCNACGI+ RK R+A         
Sbjct: 29  SGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQA--------- 88

Query: 239 GGSVVVASETPSKKSRFGCHG-----------------DGGSIIVGEVKNKCNKNMADNS 298
             ++ + SE   K  +  C+                  D G I + +    CN       
Sbjct: 89  --ALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNK----- 148

Query: 299 WESRSEGTNDGVS-FDRHNFTLSWSKSGSAFGRVFPR---DEEEAAILLMELSCGLVHS 337
             S S  +N GVS F    F +   K  +   +   R   +EE AA+LLM LSC  V++
Sbjct: 149 -RSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

[Close]

BLAST of Sed0013555 vs. ExPASy Swiss-Prot
Match: Q9ZPX0 (GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 157 ANSGPRGGKWEIRAGRYSSTTYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLC 216
           ANS    G + I  G   +++Y   G    +++  R C+ C+TT+TPLWR+GP+GPK+LC
Sbjct: 60  ANSNNISGDFYIHGGNAKTSSYKKGG---VAHSLPRRCASCDTTSTPLWRNGPKGPKSLC 119

Query: 217 NACGIR-QRKARRAMAEATNGGDGGSVVVASETPSKKSRFG 257
           NACGIR +++ RRA A       GGS   A+E P + S  G
Sbjct: 120 NACGIRFKKEERRATARNLTISGGGS--SAAEVPVENSYNG 155

[Close]

BLAST of Sed0013555 vs. ExPASy TrEMBL
Match: A0A6J1IZ80 (putative GATA transcription factor 22 OS=Cucurbita maxima OX=3661 GN=LOC111481233 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 192/343 (55.98%), Postives = 219/343 (63.85%), Query Frame = 0


Query: 1   MNSLFPLMEKQEEEDANLQLYIFSSNSHVASSSSKLAFATCF-SSATQHDHQRVNLHHHD 60
           MNSL+PLM K EE+D +L+LYIF S S VA++SS LAFATCF SSATQHDHQR++LHHH 
Sbjct: 1   MNSLYPLMAKHEEQDPDLKLYIFPSTSQVAAASSHLAFATCFTSSATQHDHQRMDLHHH- 60

Query: 61  HLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFERSRSNNIDHQ-QQLDDA 120
                         +Q EK I GSR                       +IDHQ QQLD+ 
Sbjct: 61  -------------QNQGEKEIDGSR----------------------TDIDHQEQQLDEY 120

Query: 121 QVNKFQDQNGSAAKHWMSSKTRLMQKMMINKDKKVGVIANSGPRGGKWEIRAGRYSSTTY 180
           Q+ K    NGSAAK+WMSSK RLMQKMM     KVG     G         AGR S+   
Sbjct: 121 QIKK--RDNGSAAKYWMSSKMRLMQKMM-----KVG----GGNSDQAAAAAAGRRSN--- 180

Query: 181 NSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGD 240
           N+ G +  S+NGVRVCSDCNTTTTPLWRSGPQGPK+LCNACGIRQRKARRAMAEA NGG 
Sbjct: 181 NNEGRSCCSSNGVRVCSDCNTTTTPLWRSGPQGPKSLCNACGIRQRKARRAMAEAANGGG 240

Query: 241 GGSVVVASET-----PSKKSRFGCHGDGGSIIVGEVKNKCNKNMADNSWESRSEGTNDGV 300
            G+VVVA+ +       KKSR   HGD       + K   N+NM +   ES+SEG NDGV
Sbjct: 241 RGAVVVAAASGKELYKEKKSRLSWHGDDDDGEEVKKKKGNNRNMGEKCLESQSEGRNDGV 285

Query: 301 SFDRHNFTLSWSKSGSAFGRVFPRDEEEAAILLMELSCGLVHS 337
                   L  SK+GSAFGRVFPRDEEEAAILLMELSCGLVH+
Sbjct: 301 --------LRLSKNGSAFGRVFPRDEEEAAILLMELSCGLVHT 285

[Close]

BLAST of Sed0013555 vs. ExPASy TrEMBL
Match: A0A0A0L3Z9 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646060 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 3.3e-75
Identity = 205/409 (50.12%), Postives = 248/409 (60.64%), Query Frame = 0


Query: 2   NSLFPLMEKQEE-EDANLQLYIFSSNSHVASSSSKLAFATCFS-------SATQHDHQRV 61
           +S F   +KQEE ED NL+LYIFSS+S  ++SSS+LAF+ CFS       +   H HQ V
Sbjct: 9   SSSFVEKQKQEEQEDPNLKLYIFSSSSSSSNSSSQLAFSNCFSTNPPTTTAQHHHHHQTV 68

Query: 62  NLHHHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFERSR--SNNIDH 121
           NLH H HLLQQSHHQL L HHQ EK IGGSREE ++VI+  SS +E  ERSR     ++ 
Sbjct: 69  NLHLHHHLLQQSHHQLLLHHHQDEKFIGGSREEESKVILSSSSMKEGCERSRLLEKQVEE 128

Query: 122 QQQLDDAQV-NKFQDQNGSAAKHWMSSKTRLMQKMMINKD---KKVGV------------ 181
           +   D  Q+  K QD +  + K+WMSSK RLMQKMMIN +   KKV +            
Sbjct: 129 EDDNDHHQIMMKKQDDHNGSTKYWMSSKMRLMQKMMINTNHNYKKVMINGTDHGGANNSD 188

Query: 182 -----------IANSGPRGGKWEIRAGRYSSTTYNSNGHNNNS--NNGVRVCSDCNTTTT 241
                      I N G  GGKWE   G+ SS++ + N  N  S  NNGVRVCSDCNTTTT
Sbjct: 189 HHQKATRNYNSINNEG-NGGKWEAMTGKSSSSSISCNSSNIGSVQNNGVRVCSDCNTTTT 248

Query: 242 PLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGDGGSVVVASETPS----------KK 301
           PLWRSGPQGPK+LCNACGIRQRKARRAMA+      GG V   +E  +          KK
Sbjct: 249 PLWRSGPQGPKSLCNACGIRQRKARRAMADLAANSGGGLVAETTEAAATSGKKEKHKEKK 308

Query: 302 SRFGCHGD--GGSIIVGE---VKNK-CNKN-------MADNSWESRSE--GTNDGVSF-D 337
           SR  C GD  GG+  VG+   + +K CN N         +N+ +S+SE    N+ VSF  
Sbjct: 309 SRLSCEGDNNGGNNNVGDQVKINDKYCNNNNNTDDHISNNNNLKSKSEIGMMNNEVSFAS 368

[Close]

BLAST of Sed0013555 vs. ExPASy TrEMBL
Match: A0A1S3BVA6 (GATA transcription factor 21-like OS=Cucumis melo OX=3656 GN=LOC103493657 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 205/411 (49.88%), Postives = 248/411 (60.34%), Query Frame = 0


Query: 2   NSLFP----LMEKQ---EEEDANLQLYIFSSNSHVASSSSKLAFATCFSSAT-------Q 61
           N L+P     +EKQ   E+ED NL+LYIFSS+S  +++SS+LAF+TCFS+ T        
Sbjct: 3   NPLYPSSSSFVEKQKQEEQEDPNLKLYIFSSSSS-SNTSSQLAFSTCFSTNTPTTTTTQH 62

Query: 62  HDHQRVNLHHHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFE-RSRS 121
           H HQ VNLH H HLLQQSHHQL L HHQ EK  GGSREE +EVI+  SS +E  E R   
Sbjct: 63  HHHQTVNLHLHHHLLQQSHHQLLLHHHQDEKFSGGSREEESEVILSSSSMKEGCESRLLE 122

Query: 122 NNIDHQQQLDDAQV-NKFQDQNGSAAKHWMSSKTRLMQKMMINKDK--KVGVI------- 181
             ++     D  Q+  K QD +  + K+WMSSK RLMQKMMIN +   K  VI       
Sbjct: 123 KQVEEDDDNDHHQIMMKKQDDHSGSTKYWMSSKMRLMQKMMINTNHNYKTKVIINGTDHG 182

Query: 182 ----------------ANSGPRGGKWEIRAGRYSSTTYNSNGHNNNS--NNGVRVCSDCN 241
                           +N+   GGKWE   G+ SS++ + N  N  S  NNGVRVCSDCN
Sbjct: 183 GANNSDHHQKATRNYNSNNEGNGGKWETMTGKSSSSSISCNSSNIGSVQNNGVRVCSDCN 242

Query: 242 TTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGDGGSVVVASETPS-------- 301
           TTTTPLWRSGPQGPK+LCNACGIRQRKARRAMA+       G V   +E  +        
Sbjct: 243 TTTTPLWRSGPQGPKSLCNACGIRQRKARRAMADLAANSSRGLVAETTEAAASGKKEKHK 302

Query: 302 -KKSRFGCHGD---GGSIIVGE---VKNK-CNKNMAD-----NSWESRSE--GTNDGVSF 337
            KKSR  C GD   GG+  VG+   + +K CNKN  D     N+ +S+SE    N+ VSF
Sbjct: 303 EKKSRLSCEGDNNNGGNNNVGDHAKINDKYCNKNTDDHISNNNNLKSKSEIGMMNNEVSF 362

[Close]

BLAST of Sed0013555 vs. ExPASy TrEMBL
Match: A0A6J1FR75 (putative GATA transcription factor 22 OS=Cucurbita moschata OX=3662 GN=LOC111446514 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 6.1e-74
Identity = 190/351 (54.13%), Postives = 219/351 (62.39%), Query Frame = 0


Query: 1   MNSLFPLM------EKQEEEDANLQLYIFSSNSHVASSSSKLAFATCF-SSATQHDHQRV 60
           MNSL+PLM      E+ EE+  +L+LYIF S S VA++SS LAFATCF SSATQHDHQR+
Sbjct: 1   MNSLYPLMVKHEEHEEHEEQRPDLKLYIFPSTSQVAAASSHLAFATCFTSSATQHDHQRM 60

Query: 61  NLHHHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFERSRSNNIDHQ- 120
           +LHHH               +Q EKSI GSR                       +IDHQ 
Sbjct: 61  DLHHH--------------QNQGEKSIDGSR----------------------TDIDHQE 120

Query: 121 QQLDDAQVNKFQDQNGSAAKHWMSSKTRLMQKMMINKDKKVGVIANSGPRGGKWEIRAGR 180
           QQLD+ Q+ K    NGSAAK+WMSSK RLMQKMM     KVG        GG  +  A  
Sbjct: 121 QQLDEYQIKK--GDNGSAAKYWMSSKMRLMQKMM-----KVG--------GGNSDQAAAA 180

Query: 181 YSSTTYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAE 240
               + N+ G +  S+NGVRVCSDCNTTTTPLWRSGPQGPK+LCNACGIRQRKARRAMAE
Sbjct: 181 AGRRSNNNEGRSCCSSNGVRVCSDCNTTTTPLWRSGPQGPKSLCNACGIRQRKARRAMAE 240

Query: 241 ATNGGDGGSVVVASETPS-------KKSRFGCHGDGGSIIVGEVKNKCNKNMADNSWESR 300
           A NGG GG+VVV +   S       KKSR   HGD       + K   N++M +   ES+
Sbjct: 241 AANGGGGGAVVVVAAAASGKELHKEKKSRLSWHGDDDDDEEVKKKKGNNRHMGEKCLESQ 292

Query: 301 SEGTNDGVSFDRHNFTLSWSKSGSAFGRVFPRDEEEAAILLMELSCGLVHS 337
           SEG NDGV        L  SK+GSAFGRVFPRDEEEAAILLMELSCGLVH+
Sbjct: 301 SEGRNDGV--------LRLSKNGSAFGRVFPRDEEEAAILLMELSCGLVHT 292

[Close]

BLAST of Sed0013555 vs. ExPASy TrEMBL
Match: A0A6J1DKQ2 (GATA transcription factor 21-like OS=Momordica charantia OX=3673 GN=LOC111021952 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 175/370 (47.30%), Postives = 197/370 (53.24%), Query Frame = 0


Query: 1   MNSLFPL----MEKQEE-EDANLQLYIFSSN---SHVASSSSKLA-FATCFSSATQHDHQ 60
           MN L+PL    MEK EE ED NL+LYIFSS+   S  ASSSS+L  FATCF+   ++ H 
Sbjct: 1   MNPLYPLSTSFMEKHEEKEDPNLKLYIFSSSQAASAAASSSSQLPNFATCFNQTEKNLH- 60

Query: 61  RVNLHHHDHLLQQSHHQLQLDHHQAEKSIGGSREESNEVIIFPSSTREDFERSRSNNIDH 120
             +LHHH              H Q EKS GG      E +                    
Sbjct: 61  --HLHHH--------------HDQVEKSNGGLLSRVEEEV-------------------- 120

Query: 121 QQQLDDAQVNKFQDQNGSAAKHWMSSKTRLMQKMMINKDKKVGVIANSGPR--------- 180
                       +DQ G  AK+WMSSK R+MQKMM N DKK G I NS  +         
Sbjct: 121 ------------EDQIGKTAKYWMSSKMRVMQKMMTNPDKKSGAIVNSDHKPGYSSSTTR 180

Query: 181 ------------GGKWEIRAGRYSSTTYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQ 240
                       GGKW I  GR S+    SNGH     NGVRVCSDCNTTTTPLWRSGPQ
Sbjct: 181 NYNINDTENKNNGGKWGI-LGRSSNC---SNGH-----NGVRVCSDCNTTTTPLWRSGPQ 240

Query: 241 GPKTLCNACGIRQRKARRAMAEATNGGDGGSVVVASET--PSKKSRFGCHGDGGSIIVGE 300
           GPK+LCNACGIRQRKARRAMAE  +GG G S   + +     KK R  CHGD   I    
Sbjct: 241 GPKSLCNACGIRQRKARRAMAEVASGGGGESEAASGKQLHKEKKCRTSCHGDSAGI---- 298

Query: 301 VKNKCNKNMADNSWESRSEGTNDGVSFDRHNFTLSWSKSGS--AFGRVFPRDEEEAAILL 337
           VKNK             S+  N  VSFD H+FTL   KS    AFGRVF RDEEEAAILL
Sbjct: 301 VKNKI----------MGSDHQNSSVSFDHHSFTLRLRKSSGSPAFGRVFARDEEEAAILL 298

[Close]

BLAST of Sed0013555 vs. TAIR 10
Match: AT4G26150.1 (cytokinin-responsive gata factor 1 )

HSP 1 Score: 122.9 bits (307), Expect = 5.0e-28
Identity = 106/272 (38.97%), Postives = 143/272 (52.57%), Query Frame = 0


Query: 79  SIGGSREESNEVIIFPSSTREDFERSRSNNIDHQQQLDDAQVNKFQDQNGSAAKHWMSSK 138
           S GGS   S++ ++    TR      + +N  HQ Q D  Q +  +D  G+ +  W+SSK
Sbjct: 100 SDGGS--SSSDQMVPKKETRLKLTIKKKDN--HQDQTDLPQ-SPIKDMTGTNSLKWISSK 159

Query: 139 TRLMQKMMINKDKKVGVIANSGPRGGKWEIRAGRYSSTTYNSNGHNNNSNNGVRVCSDCN 198
            RLM+       KK  +I  S               S +   NG+NN+    +R+CSDCN
Sbjct: 160 VRLMK-------KKKAIITTSDSSKQHTNNDQSSNLSNSERQNGYNNDC--VIRICSDCN 219

Query: 199 TTTTPLWRSGPQGPKTLCNACGIRQRKARR-AMAEAT-NGGDGGSVVVASETPSKKSRFG 258
           TT TPLWRSGP+GPK+LCNACGIRQRKARR AMA AT     G S  V  +    K++  
Sbjct: 220 TTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATAVSGVSPPVMKKKMQNKNKI- 279

Query: 259 CHGDGGSIIVGEVKNKCN---------KNMADNSWESRSEGT----NDGVSFDRHNFTLS 318
              +G   I+  +  K N         +       E++S  T    +D + FD  +  L 
Sbjct: 280 --SNGVYKILSPLPLKVNTCKRMITLEETALAEDLETQSNSTMLSSSDNIYFD--DLALL 339

Query: 319 WSKSGSAFGRVFPRDEEEAAILLMELSCGLVH 336
            SKS SA+ +VFP+DE+EAAILLM LS G+VH
Sbjct: 340 LSKS-SAYQQVFPQDEKEAAILLMALSHGMVH 351

[Close]

BLAST of Sed0013555 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-26
Identity = 83/185 (44.86%), Postives = 106/185 (57.30%), Query Frame = 0


Query: 177 TYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARR-AMAEATN 236
           T N NG++NN N  +RVCSDCNTT TPLWRSGP+GPK+LCNACGIRQRKARR AMA A  
Sbjct: 216 TINENGYSNN-NGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAAAAA 275

Query: 237 GGDGGSVVVAS----------ETPSKKSRFGCHGDGGSIIVGEVKNKC------NKNM-- 296
            GD    V             +   K+S  G   +    +V + K KC       K M  
Sbjct: 276 AGDQEVAVAPRVQQLPLKKKLQNKKKRSNGGEKYNHSPPMVAKAK-KCKIKEEEEKEMEA 335

Query: 297 ----ADNSWESRSEGTNDGVSFDRHNF---TLSWSKSGSAFGRVFPRDEEEAAILLMELS 336
                D+     +  +N  +S ++  F   T+  SKS SA+ +VFP+DE+EAA+LLM LS
Sbjct: 336 ETVAGDSEISKSTTSSNSSISSNKFCFDDLTIMLSKS-SAYQQVFPQDEKEAAVLLMALS 395

[Close]

BLAST of Sed0013555 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 58/179 (32.40%), Postives = 81/179 (45.25%), Query Frame = 0


Query: 179 NSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGD 238
           + +G  ++S +  R C DC T  TPLWR GP GPK+LCNACGI+ RK R+A         
Sbjct: 29  SGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQA--------- 88

Query: 239 GGSVVVASETPSKKSRFGCHG-----------------DGGSIIVGEVKNKCNKNMADNS 298
             ++ + SE   K  +  C+                  D G I + +    CN       
Sbjct: 89  --ALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNK----- 148

Query: 299 WESRSEGTNDGVS-FDRHNFTLSWSKSGSAFGRVFPR---DEEEAAILLMELSCGLVHS 337
             S S  +N GVS F    F +   K  +   +   R   +EE AA+LLM LSC  V++
Sbjct: 149 -RSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

[Close]

BLAST of Sed0013555 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.9e-12
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 192 RVCSDCNTTTTPLWRSGPQGPKTLCNACGIRQRKARRAMAEATNGGDGGSVVVASETPSK 251
           R C++C+TT+TPLWR+GP+GPK+LCNACGIR +K  R    AT    G +VV A+  P +
Sbjct: 152 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAAT----GNTVVGAA--PVQ 211

Query: 252 KSRFGCHGDG 262
             ++G H  G
Sbjct: 212 TDQYGHHNSG 215

[Close]

BLAST of Sed0013555 vs. TAIR 10
Match: AT2G18380.1 (GATA transcription factor 20 )

HSP 1 Score: 68.9 bits (167), Expect = 8.6e-12
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 157 ANSGPRGGKWEIRAGRYSSTTYNSNGHNNNSNNGVRVCSDCNTTTTPLWRSGPQGPKTLC 216
           ANS    G + I  G   +++Y   G    +++  R C+ C+TT+TPLWR+GP+GPK+LC
Sbjct: 60  ANSNNISGDFYIHGGNAKTSSYKKGG---VAHSLPRRCASCDTTSTPLWRNGPKGPKSLC 119

Query: 217 NACGIR-QRKARRAMAEATNGGDGGSVVVASETPSKKSRFG 257
           NACGIR +++ RRA A       GGS   A+E P + S  G
Sbjct: 120 NACGIRFKKEERRATARNLTISGGGS--SAAEVPVENSYNG 155

The following BLAST results are available for this feature:

BLAST of Sed0013555 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898726.1	1.4e-83	57.92	GATA transcription factor 21-like [Benincasa hispida]	[more]
XP_022982396.1	3.9e-75	55.98	putative GATA transcription factor 22 [Cucurbita maxima]	[more]
XP_011654173.1	6.7e-75	50.12	GATA transcription factor 21 [Cucumis sativus] >KGN55332.1 hypothetical protein ...	[more]
XP_023524318.1	2.6e-74	55.46	GATA transcription factor 21-like [Cucurbita pepo subsp. pepo]	[more]
XP_008452719.1	5.7e-74	49.88	PREDICTED: GATA transcription factor 21-like [Cucumis melo]	[more]

BLAST of Sed0013555 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZI6	7.1e-27	38.97	Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 ...	[more]
Q5HZ36	2.3e-25	44.86	GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2	[more]
Q6YW48	1.6e-18	31.98	Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. ...	[more]
Q9LIB5	2.2e-12	32.40	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]
Q9ZPX0	1.2e-10	42.57	GATA transcription factor 20 OS=Arabidopsis thaliana OX=3702 GN=GATA20 PE=2 SV=2	[more]

BLAST of Sed0013555 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZ80	1.9e-75	55.98	putative GATA transcription factor 22 OS=Cucurbita maxima OX=3661 GN=LOC11148123...	[more]
A0A0A0L3Z9	3.3e-75	50.12	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646060 P...	[more]
A0A1S3BVA6	2.8e-74	49.88	GATA transcription factor 21-like OS=Cucumis melo OX=3656 GN=LOC103493657 PE=4 S...	[more]
A0A6J1FR75	6.1e-74	54.13	putative GATA transcription factor 22 OS=Cucurbita moschata OX=3662 GN=LOC111446...	[more]
A0A6J1DKQ2	1.6e-58	47.30	GATA transcription factor 21-like OS=Momordica charantia OX=3673 GN=LOC111021952...	[more]

BLAST of Sed0013555 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26150.1	5.0e-28	38.97	cytokinin-responsive gata factor 1	[more]
AT5G56860.1	1.6e-26	44.86	GATA type zinc finger transcription factor family protein	[more]
AT3G16870.1	1.6e-13	32.40	GATA transcription factor 17	[more]
AT3G50870.1	3.9e-12	50.00	GATA type zinc finger transcription factor family protein	[more]
AT2G18380.1	8.6e-12	42.57	GATA transcription factor 20	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 188..239 e-value: 1.6E-20 score: 84.2
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 194..227 e-value: 1.1E-16 score: 60.2
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 194..219
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 188..224 score: 13.217456
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 193..230 e-value: 2.67815E-15 score: 67.3978
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 190..253 e-value: 6.7E-17 score: 63.3
None	No IPR available	PANTHER	PTHR47255	GATA TRANSCRIPTION FACTOR 22-RELATED	coord: 2..336
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 188..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0013555.1	Sed0013555.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding