Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAACTGGACAGTTGAGTTCCCAAAATCGTCACTTGGCGCCCATATGCATATATCATTGAACATGTTTCCATTCCAAAATCTGGCGCCACAACCTTCGCGCCAAAATCAACCCTTCCCGCCAATTTCCTTTCTCTTTATTTATATAAACCCTAATTCATCTTTACCATTTCCATCCAATCCCGATTCAATTTGCTCCAAATTTCCACAACTTCTACACCATGGTGGTTGCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCCCGTCCCCGCTTCTACACAGACGTAAAGCTCAACGACGAGCGTGTCGACCCACCGACGCCGGTCCTCGATCCGCTCCTCTCGTGGGCGAATGAGGCTCACTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAGGGTAGAATCGAAGGCAATGTGCAGAAGCTTCGGGCAGAGCGTGAGAAGATTGCTAAGAAGAAGAAATCTGTCACAATGACACGATCTATCCCAGATGGTGATCGGCGATCGAAGAAGTCGAAATCTGTATTGCCACTGCCAGCACCGGTTGTGACAAAGAGGCGGCGATTGTTGGCTTTGTTTGATGATGAGGATGATGTTGGTGAGAGCAATGAAGAGATAGGGGTTGTGAAGAGGAGGTTGGTGAAGAAACTGGGAGATGATTTTGATCGAGCGGCGGAGGAGGGGAAGAGGAATCGAAGCTTGGGATTCAATGGGGTTGGTGAATCTGTAATGAAGATTGTTGAGGAGATTAATGATGATGGTTCCAAAGGGAAAAAGATGAACAATGTAAGAAAAGAGAAAAGTAGTGGGAAAAAGGTGGAGTCTGATTCTGTTTCTGTGATTAGAACTTCTCCCAGATTAGCTAATAAGCATTGATTAAACTAATTTGGTATATGAATATAGTGTAGGGTGTTTAGATTCTGAGATTTTTCTTTGTTTTTTTCTGAGTTTTCAATACTGGGCCAAGTTCTGTAATGATGATGAGATCTTTGTTTGACTGGAAATGAAATGTGAATTATGGATTGTTATGAGGTCTGTTTGATCTTGAGCATTTGGTAACACATTATCTTGTGAATGAAGAACTTCTATTTAAC
mRNA sequence
AAAAACTGGACAGTTGAGTTCCCAAAATCGTCACTTGGCGCCCATATGCATATATCATTGAACATGTTTCCATTCCAAAATCTGGCGCCACAACCTTCGCGCCAAAATCAACCCTTCCCGCCAATTTCCTTTCTCTTTATTTATATAAACCCTAATTCATCTTTACCATTTCCATCCAATCCCGATTCAATTTGCTCCAAATTTCCACAACTTCTACACCATGGTGGTTGCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCCCGTCCCCGCTTCTACACAGACGTAAAGCTCAACGACGAGCGTGTCGACCCACCGACGCCGGTCCTCGATCCGCTCCTCTCGTGGGCGAATGAGGCTCACTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAGGGTAGAATCGAAGGCAATGTGCAGAAGCTTCGGGCAGAGCGTGAGAAGATTGCTAAGAAGAAGAAATCTGTCACAATGACACGATCTATCCCAGATGGTGATCGGCGATCGAAGAAGTCGAAATCTGTATTGCCACTGCCAGCACCGGTTGTGACAAAGAGGCGGCGATTGTTGGCTTTGTTTGATGATGAGGATGATGTTGGTGAGAGCAATGAAGAGATAGGGGTTGTGAAGAGGAGGTTGGTGAAGAAACTGGGAGATGATTTTGATCGAGCGGCGGAGGAGGGGAAGAGGAATCGAAGCTTGGGATTCAATGGGGTTGGTGAATCTGTAATGAAGATTGTTGAGGAGATTAATGATGATGGTTCCAAAGGGAAAAAGATGAACAATGTAAGAAAAGAGAAAAGTAGTGGGAAAAAGGTGGAGTCTGATTCTGTTTCTGTGATTAGAACTTCTCCCAGATTAGCTAATAAGCATTGATTAAACTAATTTGGTATATGAATATAGTGTAGGGTGTTTAGATTCTGAGATTTTTCTTTGTTTTTTTCTGAGTTTTCAATACTGGGCCAAGTTCTGTAATGATGATGAGATCTTTGTTTGACTGGAAATGAAATGTGAATTATGGATTGTTATGAGGTCTGTTTGATCTTGAGCATTTGGTAACACATTATCTTGTGAATGAAGAACTTCTATTTAAC
Coding sequence (CDS)
ATGGTGGTTGCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCCCGTCCCCGCTTCTACACAGACGTAAAGCTCAACGACGAGCGTGTCGACCCACCGACGCCGGTCCTCGATCCGCTCCTCTCGTGGGCGAATGAGGCTCACTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAGGGTAGAATCGAAGGCAATGTGCAGAAGCTTCGGGCAGAGCGTGAGAAGATTGCTAAGAAGAAGAAATCTGTCACAATGACACGATCTATCCCAGATGGTGATCGGCGATCGAAGAAGTCGAAATCTGTATTGCCACTGCCAGCACCGGTTGTGACAAAGAGGCGGCGATTGTTGGCTTTGTTTGATGATGAGGATGATGTTGGTGAGAGCAATGAAGAGATAGGGGTTGTGAAGAGGAGGTTGGTGAAGAAACTGGGAGATGATTTTGATCGAGCGGCGGAGGAGGGGAAGAGGAATCGAAGCTTGGGATTCAATGGGGTTGGTGAATCTGTAATGAAGATTGTTGAGGAGATTAATGATGATGGTTCCAAAGGGAAAAAGATGAACAATGTAAGAAAAGAGAAAAGTAGTGGGAAAAAGGTGGAGTCTGATTCTGTTTCTGTGATTAGAACTTCTCCCAGATTAGCTAATAAGCATTGA
Protein sequence
MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRIEGNVQKLRAEREKIAKKKKSVTMTRSIPDGDRRSKKSKSVLPLPAPVVTKRRRLLALFDDEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRNRSLGFNGVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANKH
Homology
BLAST of Sed0013547 vs. NCBI nr
Match:
KAG6589221.1 (hypothetical protein SDJN03_17786, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 313.5 bits (802), Expect = 1.4e-81
Identity = 172/233 (73.82%), Postives = 185/233 (79.40%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRSIPD----GDRRSKKSKSVLPLPAPVVTK 120
RLQGRIEGN+ KLR EREKIAKKKK T RS D DRRSKKSKSV P P P+ TK
Sbjct: 61 RLQGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDNADRRSKKSKSVSPPPVPIATK 120
Query: 121 RRRLLALFD-DEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RSLGFN 180
RRRL+ LFD ++DDVGE EEI VVKRRLVKKLGDDFDR A EGK+N R+L N
Sbjct: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVN 180
Query: 181 GVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
G+ ESVMKIVEEIND +KG KSSGKK+E+DS+S IRTSPRLANK
Sbjct: 181 GIDESVMKIVEEINDQSTKG---------KSSGKKLENDSISAIRTSPRLANK 224
BLAST of Sed0013547 vs. NCBI nr
Match:
KAG7022921.1 (hypothetical protein SDJN02_16657, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 313.2 bits (801), Expect = 1.9e-81
Identity = 172/233 (73.82%), Postives = 184/233 (78.97%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRS----IPDGDRRSKKSKSVLPLPAPVVTK 120
RLQGRIEGN+ KLR EREKIAKKKK T RS D DRRSKKSKSV P P P+ TK
Sbjct: 61 RLQGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDDADRRSKKSKSVSPPPVPIATK 120
Query: 121 RRRLLALFD-DEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RSLGFN 180
RRRL+ LFD ++DDVGE EEI VVKRRLVKKLGDDFDR A EGK+N R L N
Sbjct: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRKLEVN 180
Query: 181 GVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
G+ ESVMKIVEEIND +KG KSSGKK+E+DS+S IRTSPRLANK
Sbjct: 181 GIDESVMKIVEEINDQSTKG---------KSSGKKLENDSISAIRTSPRLANK 224
BLAST of Sed0013547 vs. NCBI nr
Match:
XP_023530343.1 (uncharacterized protein LOC111792943 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 310.1 bits (793), Expect = 1.6e-80
Identity = 171/233 (73.39%), Postives = 183/233 (78.54%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRS----IPDGDRRSKKSKSVLPLPAPVVTK 120
RLQGRIEGN+ KLR EREKIAKKKK T RS D RRSKKSKSV P P P+ TK
Sbjct: 61 RLQGRIEGNINKLRTEREKIAKKKKVETPERSDSDLRDDAVRRSKKSKSVSPPPVPIATK 120
Query: 121 RRRLLALFD-DEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RSLGFN 180
RRRL+ LFD +EDDVGE EEI VVKRRLVKKLGDDFDR A EGK+N R+L N
Sbjct: 121 RRRLMPLFDAEEDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVN 180
Query: 181 GVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
G+ ESVMKIVEEIND +KG KSSGKK+E+DS+S RTSPRLANK
Sbjct: 181 GIDESVMKIVEEINDQSTKG---------KSSGKKLENDSISATRTSPRLANK 224
BLAST of Sed0013547 vs. NCBI nr
Match:
XP_022989501.1 (uncharacterized protein LOC111486558 [Cucurbita maxima])
HSP 1 Score: 307.0 bits (785), Expect = 1.3e-79
Identity = 169/233 (72.53%), Postives = 182/233 (78.11%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVK NDERVDPPTPVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRS----IPDGDRRSKKSKSVLPLPAPVVTK 120
RLQGRIEGNV KLR EREKIAKKKK T RS D RRSKK KSV P P P+ TK
Sbjct: 61 RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATK 120
Query: 121 RRRLLALFD-DEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RSLGFN 180
RRRL+ LFD ++DDVGE EEI VVKRRLVKKLGDDFDR A EGK+N R+L N
Sbjct: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVN 180
Query: 181 GVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
G+ ESVMKIVEEIND+ +KG KSSGKK+E+DS+S RTSPRLANK
Sbjct: 181 GIDESVMKIVEEINDESTKG---------KSSGKKLENDSISATRTSPRLANK 224
BLAST of Sed0013547 vs. NCBI nr
Match:
XP_022930708.1 (uncharacterized protein LOC111437106 [Cucurbita moschata])
HSP 1 Score: 304.7 bits (779), Expect = 6.6e-79
Identity = 171/236 (72.46%), Postives = 184/236 (77.97%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRS----IPDGDRR---SKKSKSVLPLPAPV 120
RLQGRIEGN+ KLR EREKIAKKKK T RS D DRR SKKSKSV P P P+
Sbjct: 61 RLQGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDDADRRSKKSKKSKSVSPPPVPI 120
Query: 121 VTKRRRLLALFD-DEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RSL 180
TKRRRL+ LFD ++DDVGE EEI VVKRRLVKKLGDDFDR A EGK+N R+L
Sbjct: 121 ATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNL 180
Query: 181 GFNGVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
NG+ ESVMKIVEEIND +KG KSS KK+E+DS+S IRTSPRLANK
Sbjct: 181 EVNGIDESVMKIVEEINDQSTKG---------KSSVKKLENDSISAIRTSPRLANK 227
BLAST of Sed0013547 vs. ExPASy TrEMBL
Match:
A0A6J1JK90 (uncharacterized protein LOC111486558 OS=Cucurbita maxima OX=3661 GN=LOC111486558 PE=4 SV=1)
HSP 1 Score: 307.0 bits (785), Expect = 6.5e-80
Identity = 169/233 (72.53%), Postives = 182/233 (78.11%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVK NDERVDPPTPVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRS----IPDGDRRSKKSKSVLPLPAPVVTK 120
RLQGRIEGNV KLR EREKIAKKKK T RS D RRSKK KSV P P P+ TK
Sbjct: 61 RLQGRIEGNVNKLRTEREKIAKKKKVETQERSDSDVRDDAVRRSKKLKSVSPPPVPIATK 120
Query: 121 RRRLLALFD-DEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RSLGFN 180
RRRL+ LFD ++DDVGE EEI VVKRRLVKKLGDDFDR A EGK+N R+L N
Sbjct: 121 RRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNLEVN 180
Query: 181 GVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
G+ ESVMKIVEEIND+ +KG KSSGKK+E+DS+S RTSPRLANK
Sbjct: 181 GIDESVMKIVEEINDESTKG---------KSSGKKLENDSISATRTSPRLANK 224
BLAST of Sed0013547 vs. ExPASy TrEMBL
Match:
A0A6J1EW46 (uncharacterized protein LOC111437106 OS=Cucurbita moschata OX=3662 GN=LOC111437106 PE=4 SV=1)
HSP 1 Score: 304.7 bits (779), Expect = 3.2e-79
Identity = 171/236 (72.46%), Postives = 184/236 (77.97%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRS----IPDGDRR---SKKSKSVLPLPAPV 120
RLQGRIEGN+ KLR EREKIAKKKK T RS D DRR SKKSKSV P P P+
Sbjct: 61 RLQGRIEGNINKLRNEREKIAKKKKVETPERSDSDLRDDADRRSKKSKKSKSVSPPPVPI 120
Query: 121 VTKRRRLLALFD-DEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RSL 180
TKRRRL+ LFD ++DDVGE EEI VVKRRLVKKLGDDFDR A EGK+N R+L
Sbjct: 121 ATKRRRLMPLFDAEDDDVGEHKEEIRVVKRRLVKKLGDDFDRVAVEGKKNQLKGSRDRNL 180
Query: 181 GFNGVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
NG+ ESVMKIVEEIND +KG KSS KK+E+DS+S IRTSPRLANK
Sbjct: 181 EVNGIDESVMKIVEEINDQSTKG---------KSSVKKLENDSISAIRTSPRLANK 227
BLAST of Sed0013547 vs. ExPASy TrEMBL
Match:
A0A5A7SPW2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003380 PE=4 SV=1)
HSP 1 Score: 301.6 bits (771), Expect = 2.7e-78
Identity = 168/237 (70.89%), Postives = 182/237 (76.79%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRSIP---------DGDRRSKKSKSVLPLPA 120
RLQGRIEGNV KLR EREK+AKKK S P D R+ KK++SV P PA
Sbjct: 61 RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120
Query: 121 PVVTKRRRLLALFDDEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RS 180
PV TKRRRL+ LF+DEDDVG EEIGVVKRRLVKKLGDDFDR A E KRN RS
Sbjct: 121 PVATKRRRLMVLFEDEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180
Query: 181 LGFNGVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
N V ESVMKIVEEIN++ +K K++N +K K+ G KVES SVS RTSPRLANK
Sbjct: 181 SEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVG-KVESVSVSGTRTSPRLANK 236
BLAST of Sed0013547 vs. ExPASy TrEMBL
Match:
A0A6J1D3X9 (uncharacterized protein LOC111016810 OS=Momordica charantia OX=3673 GN=LOC111016810 PE=4 SV=1)
HSP 1 Score: 301.6 bits (771), Expect = 2.7e-78
Identity = 171/237 (72.15%), Postives = 182/237 (76.79%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVVALGPGKFYGSSLPRPR+YTDVKLNDERVDPPTPVLDPLL WANEAHWSMGGLSFNRL
Sbjct: 1 MVVALGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLLWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRSIPDGD--------RRSKKSKSVLPLPAP 120
RLQGRIEGN+ KLR EREKIAKKKK + D RR KSKSV P PAP
Sbjct: 61 RLQGRIEGNIDKLRVEREKIAKKKKKAEKDSASKRSDLDAGADVVRRLGKSKSVSPPPAP 120
Query: 121 VVTKRRRLLALFDDE-DDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RS 180
+ TKRRRL+ALFDDE DD GE EEIGVVKRRLVKKLGDDFDR A E KRN R
Sbjct: 121 IATKRRRLIALFDDEDDDGGEYKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKYSRDRI 180
Query: 181 LGFNGVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
+G+GESVMKIVEEIN ++GKKMN+ RK K+ GK ES SVS RTSPRLANK
Sbjct: 181 SPVDGIGESVMKIVEEINGADTEGKKMNSERKGKNVGKS-ESGSVSRTRTSPRLANK 236
BLAST of Sed0013547 vs. ExPASy TrEMBL
Match:
A0A1S3C0M4 (uncharacterized protein LOC103495510 OS=Cucumis melo OX=3656 GN=LOC103495510 PE=4 SV=1)
HSP 1 Score: 301.6 bits (771), Expect = 2.7e-78
Identity = 168/237 (70.89%), Postives = 182/237 (76.79%), Query Frame = 0
Query: 1 MVVALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
MVV LGPGKFYGSSLPRPR+YTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1 MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
Query: 61 RLQGRIEGNVQKLRAEREKIAKKKKSVTMTRSIP---------DGDRRSKKSKSVLPLPA 120
RLQGRIEGNV KLR EREK+AKKK S P D R+ KK++SV P PA
Sbjct: 61 RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120
Query: 121 PVVTKRRRLLALFDDEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRN-------RS 180
PV TKRRRL+ LF+DEDDVG EEIGVVKRRLVKKLGDDFDR A E KRN RS
Sbjct: 121 PVATKRRRLMVLFEDEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180
Query: 181 LGFNGVGESVMKIVEEINDDGSKGKKMNNVRKEKSSGKKVESDSVSVIRTSPRLANK 222
N V ESVMKIVEEIN++ +K K++N +K K+ G KVES SVS RTSPRLANK
Sbjct: 181 SEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVG-KVESVSVSGTRTSPRLANK 236
BLAST of Sed0013547 vs. TAIR 10
Match:
AT4G28310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 162.2 bits (409), Expect = 4.9e-40
Identity = 106/221 (47.96%), Postives = 130/221 (58.82%), Query Frame = 0
Query: 3 VALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRL 62
+A+ P FYG+ LPRPRF+ + K ND RVDPP VLDPLLSWA +AHWSMGGL+F RLRL
Sbjct: 9 IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68
Query: 63 QGRIEGNVQKLRAEREKIAKKKKSVTMTRSIPDGDRRSKKSKSVLPLPAPVVTKRRRLLA 122
QGRIEGNV KLRA+ EK K + R+ K+S S P AP+V KRRR L
Sbjct: 69 QGRIEGNVNKLRAQLEKSTPVKL---------ESGRKKKRSGSESPPSAPIVVKRRRYLD 128
Query: 123 LFDDEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGKRNRSLGFNGVGESVMKIVEEIN 182
L +D DD +E+ GVV R+ +KL DDFDR AEE K K+VE
Sbjct: 129 L-NDSDDEEVGSEDEGVV--RIRRKLSDDFDRVAEESK--------------TKLVEA-- 188
Query: 183 DDGSKGKKMNNVRKEKSSGKK--VESDSVSVIRTSPRLANK 222
K K V K++ KK V+ + S R+SPRLA +
Sbjct: 189 --NKKSIKSEFVEKKRLIEKKKIVKVNKTSSTRSSPRLAKR 199
BLAST of Sed0013547 vs. TAIR 10
Match:
AT1G52270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28310.1); Has 29 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 70.1 bits (170), Expect = 2.6e-12
Identity = 52/158 (32.91%), Postives = 70/158 (44.30%), Query Frame = 0
Query: 3 VALGPGKFYGSSLPRPRFYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRL 62
+A+ P FY + LPRPRF+ + + N RVD P VLDPLLSWA
Sbjct: 9 LAIRPVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWAQ---------------- 68
Query: 63 QGRIEGNVQKLRAEREKIAKKKKSVTMTRSIPDGDRRSKKSKSVLPLPAPVVTKRRRLLA 122
+ +S P AP+V KRRR L
Sbjct: 69 --------------------------LEKSSP---------------AAPIVLKRRRYL- 101
Query: 123 LFDDEDDVGESNEEIGVVKRRLVKKLGDDFDRAAEEGK 161
D++++G +E++GVV R+ +KL DDFDR AEE K
Sbjct: 129 ---DDEEIG--SEDVGVV--RIRRKLSDDFDRVAEESK 101
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6589221.1 | 1.4e-81 | 73.82 | hypothetical protein SDJN03_17786, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7022921.1 | 1.9e-81 | 73.82 | hypothetical protein SDJN02_16657, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023530343.1 | 1.6e-80 | 73.39 | uncharacterized protein LOC111792943 [Cucurbita pepo subsp. pepo] | [more] |
XP_022989501.1 | 1.3e-79 | 72.53 | uncharacterized protein LOC111486558 [Cucurbita maxima] | [more] |
XP_022930708.1 | 6.6e-79 | 72.46 | uncharacterized protein LOC111437106 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JK90 | 6.5e-80 | 72.53 | uncharacterized protein LOC111486558 OS=Cucurbita maxima OX=3661 GN=LOC111486558... | [more] |
A0A6J1EW46 | 3.2e-79 | 72.46 | uncharacterized protein LOC111437106 OS=Cucurbita moschata OX=3662 GN=LOC1114371... | [more] |
A0A5A7SPW2 | 2.7e-78 | 70.89 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1D3X9 | 2.7e-78 | 72.15 | uncharacterized protein LOC111016810 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
A0A1S3C0M4 | 2.7e-78 | 70.89 | uncharacterized protein LOC103495510 OS=Cucumis melo OX=3656 GN=LOC103495510 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT4G28310.1 | 4.9e-40 | 47.96 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT1G52270.1 | 2.6e-12 | 32.91 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |